JAR3D on RF00061

Rfam family RF00061 maps to these 33 chains: 4UJC|1|AC, 4UJD|1|BC, 4UPY|1|C, 4UPZ|1|C, 5A2Q|1|3, 5FLX|1|z, 5OA3|1|3, 6IP6|1|zz, 6IP8|1|zz, 7SYG|1|z, 7SYH|1|z, 7SYI|1|z, 7SYJ|1|z, 7SYK|1|z, 7SYL|1|z, 7SYM|1|z, 7SYN|1|z, 7SYO|1|z, 7SYP|1|z, 7SYQ|1|z, 7SYR|1|z, 7SYS|1|z, 7SYT|1|z, 7SYU|1|z, 7SYV|1|z, 7SYW|1|z, 7SYX|1|z, 9KKF|1|zz, 9KN5|1|zz, 9KN6|1|zz, 9KRP|1|zz, 9KZU|1|zz, 9KZX|1|zz See more about them at RNA 3D Hub by filtering on the chain or the Rfam family.

Rfam family RF00061 is part of clan CL00017, which includes Rfam families RF00209, RF00061 .
There are 34 chains in PDB that we map to these Rfam families: 4C4Q|1|N, 4UJC|1|AC, 4UJD|1|BC, 4UPY|1|C, 4UPZ|1|C, 5A2Q|1|3, 5FLX|1|z, 5OA3|1|3, 6IP6|1|zz, 6IP8|1|zz, 7SYG|1|z, 7SYH|1|z, 7SYI|1|z, 7SYJ|1|z, 7SYK|1|z, 7SYL|1|z, 7SYM|1|z, 7SYN|1|z, 7SYO|1|z, 7SYP|1|z, 7SYQ|1|z, 7SYR|1|z, 7SYS|1|z, 7SYT|1|z, 7SYU|1|z, 7SYV|1|z, 7SYW|1|z, 7SYX|1|z, 9KKF|1|zz, 9KN5|1|zz, 9KN6|1|zz, 9KRP|1|zz, 9KZU|1|zz, 9KZX|1|zz . See them at RNA 3D Hub by filtering on Rfam family, clan, or chain.

Loop 13 Internal loop

Column numbers: 190-191, 202-208 - View nucleotides in PDB file(s)

    Scored sequences and counts

    
    UC*GAU-AAA   18

    
    UC*GAUC-AA   12

    
    UC*GAUCAAA    6

    
    UC*GAUU-AA    4

    
    UC*GAAC-AA    3

    
    UC*GAACAAA    1

    
    UC*GAUCUAA    1

    
    UC*GAUUAAA    1

    
    UC*GAAC-CA    1

    
    UC*GAC-AAA    1

    
    UC*GAGC-AA    1

    
    UC*GAU-AAC    1

    
    UC*GAUA-AA    1

Click on headings to reorder table

#	Matching motif group	Acceptance Rate	Mean Cutoff Score	Full Edit Distance	Interior Edit Distance	Basepair Diagram and most common annotation
1	Motif group IL_87211.1 View motif instance in 3D Basepair signature: cWW-cSW-L-cWW-L	94.12	35.56	4	1
2	Motif group IL_46086.1 View motif instance in 3D Basepair signature: cWW-L-cWW-L-L-R	92.16	20.59	5	2
3	Motif group IL_25412.1 View motif instance in 3D Basepair signature: cWW-L-cWW-L-L	84.31	0.37	7	3	Major groove intercalation
4	Motif group IL_59302.1 View motif instance in 3D Basepair signature: cWW-L-R-L-cWW-L	70.59	-3.44	6	2
5	Motif group IL_88017.1 View motif instance in 3D Basepair signature: cWW-L-cWW-L-L-R-L	58.82	2.14	4	2
6	Motif group IL_49714.1 View motif instance in 3D Basepair signature: cWW-L-cWW-L-L	56.86	-0.18	4	2	Major groove intercalation
7	Motif group IL_38186.6 View motif instance in 3D Basepair signature: cWW-L-cWW-L-L-R	50.98	-15.10	2	2
8	Motif group IL_98347.1 View motif instance in 3D Basepair signature: cWW-L-R-L-cWW	45.10	-17.64	3	3
9	Motif group IL_25573.1 View motif instance in 3D Basepair signature: cWW-tSW-L-cWW-L-L	39.22	-15.77	5	3
10	Motif group IL_14177.2 View motif instance in 3D Basepair signature: cWW-L-R-L-cWW	37.25	-29.82	6	3
11	Motif group IL_61299.4 View motif instance in 3D Basepair signature: cWW-L-R-L-cWW-L-L	37.25	-38.63	5	3
12	Motif group IL_99380.1 View motif instance in 3D Basepair signature: cWW-L-cWW-L-L-R	23.53	-12.25	5	3
13	Motif group IL_88082.1 View motif instance in 3D Basepair signature: cWW-L-tSS-L-cWW-L	9.80	-26.38	4	2
14	Motif group IL_92634.2 View motif instance in 3D Basepair signature: cWW-L-cWW-L-L	7.84	-29.84	7	3
15	Motif group IL_25463.1 View motif instance in 3D Basepair signature: cWW-L-cWW-L-L	1.96	-39.88	6	3
16	Motif group IL_00881.1 View motif instance in 3D Basepair signature: cWW-L-cWW-L	0.00	-37.40	4	2
17	Motif group IL_95811.1 View motif instance in 3D Basepair signature: cWW-L-cWW-L-cWW-L-R-L	0.00	-38.30	6	4	Vitamin B12 Aptamer
18	Motif group IL_27393.10 View motif instance in 3D Basepair signature: cWW-L-cWW-L-L-R-L-R	0.00	-39.00	7	3
19	Motif group IL_70376.1 View motif instance in 3D Basepair signature: cWW-L-cWW-L	0.00	-39.03	5	3
20	Motif group IL_74957.1 View motif instance in 3D Basepair signature: cWW-L-cHW-L-cWW-L	0.00	-44.86	6	4	cWH basepair with bulged bases
21	Motif group IL_33711.1 View motif instance in 3D Basepair signature: cWW-cSH-cWW-L-L-R-L	0.00	-46.32	7	4	Minor groove platform
22	Motif group IL_64842.1 View motif instance in 3D Basepair signature: cWW-L-tWH-L-cWW-L-cSH	0.00	-46.36	7	3
23	Motif group IL_94684.1 View motif instance in 3D Basepair signature: cWW-tWH-R-L-cWW-L-L	0.00	-48.55	7	4
24	Motif group IL_82706.1 View motif instance in 3D Basepair signature: cWW-L-R-L-cWW	0.00	-50.82	9	5
25	Motif group IL_55917.1 View motif instance in 3D Basepair signature: cWW-L-cWW-L-L-R	0.00	-50.93	9	5
26	Motif group IL_51191.1 View motif instance in 3D Basepair signature: cWW-L-R-L-cWW-L-L	0.00	-54.41	9	5
27	Motif group IL_37603.1 View motif instance in 3D Basepair signature: cWW-L-cWW-L-cWW-L-L	0.00	-54.92	8	5
28	Motif group IL_81522.2 View motif instance in 3D Basepair signature: cWW-L-L-cWW	0.00	-58.53	5	3	Major groove minor groove platform with intercalation; mini C-loop
29	Motif group IL_47087.1 View motif instance in 3D Basepair signature: cWW-L-cWW-L-cWW-tWH-L-L	0.00	-59.82	6	4	Kink-turn related
30	Motif group IL_73452.2 View motif instance in 3D Basepair signature: cWW-L-cWW	0.00	-63.68	4	2
31	Motif group IL_07173.1 View motif instance in 3D Basepair signature: cWW-L-R-L-cWW-L	0.00	-63.94	7	4
32	Motif group IL_41203.4 View motif instance in 3D Basepair signature: cWW-L-cWW-L-L-R-cSH	0.00	-65.91	5	3	SSU/LSU pseudoknot
33	Motif group IL_46112.1 View motif instance in 3D Basepair signature: cWW-L-cWW-L-L-R-L	0.00	-66.01	9	5
34	Motif group IL_91592.1 View motif instance in 3D Basepair signature: cWW-L-tHH-L-cWW-L-L	0.00	-66.16	8	4
35	Motif group IL_47078.3 View motif instance in 3D Basepair signature: cWW-cWS-L-cWW-L	0.00	-66.64	4	2	Minor groove platform
36	Motif group IL_12566.4 View motif instance in 3D Basepair signature: cWW-L-tHS-L-cWW-L	0.00	-68.00	4	2
37	Motif group IL_26598.1 View motif instance in 3D Basepair signature: cWW-L-cWW-L-L-R-L-R	0.00	-69.02	6	4
38	Motif group IL_86136.1 View motif instance in 3D Basepair signature: cWW-tSH-L-cWW-L-L-R-L	0.00	-70.25	7	4
39	Motif group IL_42626.2 View motif instance in 3D Basepair signature: cWW-cWW	0.00	-70.61	4	2
40	Motif group IL_90346.1 View motif instance in 3D Basepair signature: cWW-L-R-L-cWW-L-L	0.00	-71.56	9	5
41	Motif group IL_19897.3 View motif instance in 3D Basepair signature: cWW-L-cWW-L-L-tWH-R-L	0.00	-73.68	7	5
42	Motif group IL_21173.1 View motif instance in 3D Basepair signature: cWW-L-cWW-L-L-R-L-R-L	0.00	-75.26	7	5
43	Motif group IL_29346.2 View motif instance in 3D Basepair signature: cWW-L-cWW-L-L	0.00	-75.27	4	3	Left turn
44	Motif group IL_53596.1 View motif instance in 3D Basepair signature: cWW-L-cWW-L-L-R-L	0.00	-78.43	6	5
45	Motif group IL_44325.1 View motif instance in 3D Basepair signature: cWW-cWH-cWW-L	0.00	-78.73	5	3
46	Motif group IL_68140.4 View motif instance in 3D Basepair signature: cWW-cSH-cWW	0.00	-79.62	4	2	Major groove minor groove platform; mini C-loop
47	Motif group IL_82968.1 View motif instance in 3D Basepair signature: cWW-L-cWW-L-L-R-L-R-L	0.00	-79.81	8	5
48	Motif group IL_26685.1 View motif instance in 3D Basepair signature: cWW-L-cWW-L	0.00	-81.88	6	2	Multiple bulged bases
49	Motif group IL_05192.4 View motif instance in 3D Basepair signature: cWW-L-R-L-R-L-cWW-L	0.00	-83.57	8	4
50	Motif group IL_47074.2 View motif instance in 3D Basepair signature: cWW-L-cWW-L	0.00	-84.35	5	3
51	Motif group IL_94967.1 View motif instance in 3D Basepair signature: cWW-L-cWW-L	0.00	-85.13	5	3
52	Motif group IL_11344.2 View motif instance in 3D Basepair signature: cWW-cSS-L-cWW	0.00	-87.13	8	5	180 degree turn
53	Motif group IL_76758.2 View motif instance in 3D Basepair signature: cWW-L-R-L-cWW-L-L	0.00	-87.50	7	4	Intercalated tWH
54	Motif group IL_69440.3 View motif instance in 3D Basepair signature: cWW-L-R-cSH-cWW	0.00	-87.82	5	3
55	Motif group IL_81831.1 View motif instance in 3D Basepair signature: cWW-L-cWW	0.00	-89.24	3	2	Intercalated cWS
56	Motif group IL_70335.1 View motif instance in 3D Basepair signature: cWW-L-R-L-cWW	0.00	-92.99	7	4
57	Motif group IL_97697.1 View motif instance in 3D Basepair signature: cWW-L-R-L-R-L-cWW-L-L	0.00	-93.99	8	5	Reverse turn
58	Motif group IL_43622.1 View motif instance in 3D Basepair signature: cWW-cWW-L-cWW-L	0.00	-94.46	6	4
59	Motif group IL_91636.1 View motif instance in 3D Basepair signature: cWW-tSH-L-R-L-cWW-L-L	0.00	-95.77	6	5
60	Motif group IL_73789.1 View motif instance in 3D Basepair signature: cWW-L-R-L-cWW-L	0.00	-96.29	7	4
61	Motif group IL_69145.3 View motif instance in 3D Basepair signature: cWW-L-cWW-L-R-L-R-R	0.00	-96.76	9	5	Pseudoknot
62	Motif group IL_06549.2 View motif instance in 3D Basepair signature: cWW-cWW	0.00	-97.51	6	3
63	Motif group IL_89984.3 View motif instance in 3D Basepair signature: cWW-L-R-L-cWW	0.00	-97.60	4	4
64	Motif group IL_80412.1 View motif instance in 3D Basepair signature: cWW-tSW-L-cWW-L-L-R-L	0.00	-97.64	8	7
65	Motif group IL_82741.2 View motif instance in 3D Basepair signature: cWW-L-cWW-L-L	0.00	-98.45	6	3
66	Motif group IL_66635.5 View motif instance in 3D Basepair signature: cWW-L-cWW	0.00	-98.64	3	2	Major groove intercalation
67	Motif group IL_18354.1 View motif instance in 3D Basepair signature: cWW-L-cWW-L-L-R-L-R-L-R	0.00	-101.99	7	5
68	Motif group IL_19668.1 View motif instance in 3D Basepair signature: cWW-cWW-L-cWW-L	0.00	-103.11	5	3	Isolated non-canonical cWW pair
69	Motif group IL_14368.1 View motif instance in 3D Basepair signature: cWW-L-cWW-cSH	0.00	-103.37	4	2	Major groove platform with intercalated tWH
70	Motif group IL_42778.1 View motif instance in 3D Basepair signature: cWW-L-R-L-R-L-R-L-cWW	0.00	-104.29	9	6
71	Motif group IL_70096.1 View motif instance in 3D Basepair signature: cWW-L-cWW-cWW	0.00	-104.91	8	5	Kink-turn related
72	Motif group IL_33623.1 View motif instance in 3D Basepair signature: cWW-L-tHH-L-R-L-cWW-L-R	0.00	-105.87	8	5
73	Motif group IL_85222.1 View motif instance in 3D Basepair signature: cWW-L-R-L-R-L-cWW-L-L	0.00	-106.09	8	7
74	Motif group IL_33323.1 View motif instance in 3D Basepair signature: cWW-L-R-L-cWW-L-L	0.00	-106.28	7	3
75	Motif group IL_57881.1 View motif instance in 3D Basepair signature: cWW-L-cWW	0.00	-106.60	8	4	Multiple bulged bases
76	Motif group IL_04650.2 View motif instance in 3D Basepair signature: cWW-cWW-L-cWW-L-R-L-L-cSH	0.00	-108.53	9	5
77	Motif group IL_07171.1 View motif instance in 3D Basepair signature: cWW-L-cWW-L	0.00	-108.78	6	4	Bulged stacked bases
78	Motif group IL_20031.1 View motif instance in 3D Basepair signature: cWW-L-cWW-L	0.00	-110.63	6	4
79	Motif group IL_15052.4 View motif instance in 3D Basepair signature: cWW-L-cWW-L	0.00	-111.23	4	2	Minor groove platform
80	Motif group IL_49612.1 View motif instance in 3D Basepair signature: cWW-L-R-L-R-L-cWW-L	0.00	-112.65	7	5
81	Motif group IL_82683.2 View motif instance in 3D Basepair signature: cWW-L-R-L-cWW-L	0.00	-113.15	9	5
82	Motif group IL_38969.1 View motif instance in 3D Basepair signature: cWW-L-R-L-cWW-L-L	0.00	-113.18	10	7	Reverse kink-turn related
83	Motif group IL_15218.1 View motif instance in 3D Basepair signature: cWW-L-cWW-L-L-R-L-R-L-R-L	0.00	-114.08	9	5
84	Motif group IL_47108.1 View motif instance in 3D Basepair signature: cWW-L-R-L-tHH-L-cWW	0.00	-114.74	7	5
85	Motif group IL_56987.1 View motif instance in 3D Basepair signature: cWW-L-cWW	0.00	-115.13	3	2
86	Motif group IL_73355.1 View motif instance in 3D Basepair signature: cWW-L-cWW-L	0.00	-115.89	6	2
87	Motif group IL_34737.1 View motif instance in 3D Basepair signature: cWW-L-cHW-L-cWW-L	0.00	-115.96	8	5
88	Motif group IL_95583.2 View motif instance in 3D Basepair signature: cWW-L-cWW	0.00	-116.37	4	2	Minor groove platform, major groove intercalation
89	Motif group IL_85498.1 View motif instance in 3D Basepair signature: cWW-L-R-L-cWW-L-L-R-L-R	0.00	-116.41	9	7
90	Motif group IL_41853.1 View motif instance in 3D Basepair signature: cWW-L-tHH-L-tHS-L-cWW-L-L	0.00	-117.99	8	5
91	Motif group IL_79895.1 View motif instance in 3D Basepair signature: cWW-L-cWW-L	0.00	-118.14	4	2
92	Motif group IL_74184.1 View motif instance in 3D Basepair signature: cWW-L-tHS-L-cWW-L-L-L	0.00	-118.22	9	6
93	Motif group IL_54896.1 View motif instance in 3D Basepair signature: cWW-L-R-L-cWW-L-L-R-L-R	0.00	-118.39	9	7
94	Motif group IL_09570.1 View motif instance in 3D Basepair signature: cWW-L-R-L-R-L-cWW-L-L-R	0.00	-119.43	9	7
95	Motif group IL_24499.1 View motif instance in 3D Basepair signature: cWW-cWS-L-R-L-R-cWW-L-cSH-L	0.00	-119.67	9	7
96	Motif group IL_84476.1 View motif instance in 3D Basepair signature: cWW-cWW	0.00	-119.88	5	2	Multiple bulged bases
97	Motif group IL_22829.2 View motif instance in 3D Basepair signature: cWW-L-tHS-L-R-L-cWW-L	0.00	-122.71	7	4
98	Motif group IL_21667.1 View motif instance in 3D Basepair signature: cWW-tSH-L-R-L-cWW	0.00	-124.23	7	4
99	Motif group IL_18472.4 View motif instance in 3D Basepair signature: cWW-tSW-R-L-R-L-R-cWW	0.00	-125.08	8	6
100	Motif group IL_66997.2 View motif instance in 3D Basepair signature: cWW-L-R-L-cWW-L	0.00	-125.88	6	4
101	Motif group IL_69000.1 View motif instance in 3D Basepair signature: cWW-L-cWW-L-cWW-L	0.00	-125.89	7	5
102	Motif group IL_80209.1 View motif instance in 3D Basepair signature: cWW-cHW-L-cWW-L-L-R-L-R-L	0.00	-126.48	9	6
103	Motif group IL_56317.1 View motif instance in 3D Basepair signature: cWW-L-R-L-R-L-cWW	0.00	-127.35	6	6
104	Motif group IL_82107.4 View motif instance in 3D Basepair signature: cWW-cWW	0.00	-128.66	3	2	Multiple bulged bases
105	Motif group IL_25186.4 View motif instance in 3D Basepair signature: cWW-L-R-L-R-L-R-cWW	0.00	-130.44	6	4
106	Motif group IL_47972.1 View motif instance in 3D Basepair signature: cWW-L-R-L-cWW-L	0.00	-130.63	7	4
107	Motif group IL_22551.4 View motif instance in 3D Basepair signature: cWW-L-cWW-L	0.00	-131.97	3	3
108	Motif group IL_88974.1 View motif instance in 3D Basepair signature: cWW-L-R-L-cWW-L-L-R-L-R	0.00	-133.53	10	7
109	Motif group IL_76709.2 View motif instance in 3D Basepair signature: cWW-L-cWW-L	0.00	-133.85	4	2
110	Motif group IL_33141.1 View motif instance in 3D Basepair signature: cWW-L-R-L-R-L-cWW-L-L	0.00	-136.37	9	6
111	Motif group IL_30730.1 View motif instance in 3D Basepair signature: cWW-cSH-L-R-L-cWW-L-R	0.00	-136.83	8	6
112	Motif group IL_31084.1 View motif instance in 3D Basepair signature: cWW-L-R-L-R-L-R-L-cWW-L	0.00	-137.02	10	7
113	Motif group IL_09908.1 View motif instance in 3D Basepair signature: cWW-L-tHH-L-R-L-cWW-L	0.00	-137.09	7	4	Reverse kink-turn
114	Motif group IL_02555.1 View motif instance in 3D Basepair signature: cWW-L-cWW	0.00	-137.66	5	2	Major groove platform with intercalation
115	Motif group IL_44874.1 View motif instance in 3D Basepair signature: cWW-tSH-tHW-L-cWW-L-L	0.00	-137.72	8	6	tSH-tHW
116	Motif group IL_28788.1 View motif instance in 3D Basepair signature: cWW-L-R-cWW	0.00	-137.78	8	4
117	Motif group IL_59258.1 View motif instance in 3D Basepair signature: cWW-L-R-L-R-L-cWW-L-cWW	0.00	-137.97	4	4
118	Motif group IL_59877.1 View motif instance in 3D Basepair signature: cWW-L-cWW	0.00	-140.81	4	2
119	Motif group IL_21001.1 View motif instance in 3D Basepair signature: cWW-L-R-tHW-L-cWW	0.00	-142.87	8	5
120	Motif group IL_85652.1 View motif instance in 3D Basepair signature: cWW-tSH-L-R-L-R-L-cWW-L	0.00	-143.87	10	7
121	Motif group IL_11415.1 View motif instance in 3D Basepair signature: cWW-L-R-L-cWW-L	0.00	-144.49	7	4
122	Motif group IL_78472.1 View motif instance in 3D Basepair signature: cWW-L-R-L-R-L-R-L-cWW-L-L	0.00	-147.28	7	7
123	Motif group IL_08770.1 View motif instance in 3D Basepair signature: cWW-L-R-cWW	0.00	-147.62	5	3
124	Motif group IL_01994.1 View motif instance in 3D Basepair signature: cWW-cWH-tHS-cWW-cSH-cWW	0.00	-148.85	6	4
125	Motif group IL_45444.1 View motif instance in 3D Basepair signature: cWW-L-R-L-R-L-cWW	0.00	-150.54	9	6
126	Motif group IL_95570.1 View motif instance in 3D Basepair signature: cWW-cWH-R-L-cWW	0.00	-151.56	8	4
127	Motif group IL_74051.1 View motif instance in 3D Basepair signature: cWW-tSS-tSH-L-tHS-cWW-L	0.00	-151.78	8	5	Kink-turn
128	Motif group IL_89312.1 View motif instance in 3D Basepair signature: cWW-tSH-L-cWS-cWW-L	0.00	-152.29	9	6
129	Motif group IL_99498.1 View motif instance in 3D Basepair signature: cWW-L-R-tHW-cWW	0.00	-153.19	8	6
130	Motif group IL_69271.3 View motif instance in 3D Basepair signature: cWW-cWW-L-R-L-cWW-L-L-R	0.00	-157.37	9	7
131	Motif group IL_48076.6 View motif instance in 3D Basepair signature: cWW-cSH-cWW	0.00	-157.76	2	2	Major groove platform
132	Motif group IL_16665.1 View motif instance in 3D Basepair signature: cWW-L-R-L-R-L-R-L-cWW	0.00	-158.27	9	8
133	Motif group IL_97273.1 View motif instance in 3D Basepair signature: cWW-tSH-cWW-L-cWW-L	0.00	-160.50	5	4
134	Motif group IL_26728.3 View motif instance in 3D Basepair signature: cWW-cSH-R-cSH-cWW-cWW	0.00	-162.34	8	5
135	Motif group IL_33761.2 View motif instance in 3D Basepair signature: cWW-L-cWW	0.00	-163.77	5	3
136	Motif group IL_76319.5 View motif instance in 3D Basepair signature: cWW-L-R-L-cWW	0.00	-165.09	7	4
137	Motif group IL_10389.1 View motif instance in 3D Basepair signature: cWW-L-cWW-L-cWW	0.00	-165.20	6	4
138	Motif group IL_43140.1 View motif instance in 3D Basepair signature: cWW-L-cWW-cWH-L-L	0.00	-166.86	10	7
139	Motif group IL_61438.4 View motif instance in 3D Basepair signature: cWW-L-cWW	0.00	-167.53	6	3
140	Motif group IL_96332.5 View motif instance in 3D Basepair signature: cWW-cWW-L-R-L-cWW-L	0.00	-168.18	7	5
141	Motif group IL_90729.1 View motif instance in 3D Basepair signature: cWW-L-cWW	0.00	-168.70	4	2	Single stack bend
142	Motif group IL_77278.1 View motif instance in 3D Basepair signature: cWW-tWW-L-tWW-cWW-L	0.00	-170.20	9	7
143	Motif group IL_31737.3 View motif instance in 3D Basepair signature: cWW-L-cWW	0.00	-170.87	5	3	Stack and bulge
144	Motif group IL_83389.2 View motif instance in 3D Basepair signature: cWW-cWW	0.00	-170.91	6	3
145	Motif group IL_44438.1 View motif instance in 3D Basepair signature: cWW-L-R-L-R-L-R-L-R-cWW	0.00	-171.44	8	8
146	Motif group IL_49061.1 View motif instance in 3D Basepair signature: cWW-L-R-L-cWW-L	0.00	-173.02	5	4
147	Motif group IL_19102.1 View motif instance in 3D Basepair signature: cWW-L-R-L-cWW	0.00	-173.70	6	2
148	Motif group IL_52743.1 View motif instance in 3D Basepair signature: cWW-tSW-L-cSW-L-cWW-L	0.00	-173.98	3	3
149	Motif group IL_70627.3 View motif instance in 3D Basepair signature: cWW-L-R-tHW-cWW	0.00	-174.94	8	6	UAA/GAN related
150	Motif group IL_50694.7 View motif instance in 3D Basepair signature: cWW-tSH-cWW-L	0.00	-176.62	3	2	Major groove platform; stack outside cWW
151	Motif group IL_53787.1 View motif instance in 3D Basepair signature: cWW-L-cWW-L-L-R-L-R-L-R-L-R	0.00	-177.73	10	8	Pseudoknot
152	Motif group IL_78349.3 View motif instance in 3D Basepair signature: cWW-L-R-L-R-L-R-L-cWW-L-L	0.00	-179.67	10	7
153	Motif group IL_62012.1 View motif instance in 3D Basepair signature: cWW-cWW-L-R-L-cWW	0.00	-179.91	7	4	Decoding loop related
154	Motif group IL_84665.1 View motif instance in 3D Basepair signature: cWW-L-cSW-cWW-L-L-R-L-R-L-R-L	0.00	-181.50	11	8
155	Motif group IL_31561.1 View motif instance in 3D Basepair signature: cWW-L-R-tWH-tWH-L-R-L-cWW	0.00	-182.11	8	6
156	Motif group IL_29471.1 View motif instance in 3D Basepair signature: cWW-cWW-L-tHS-L-cWW	0.00	-182.86	7	4
157	Motif group IL_77870.1 View motif instance in 3D Basepair signature: cWW-L-R-L-tHS-L-cWW-L-cWW	0.00	-184.41	9	6
158	Motif group IL_55516.2 View motif instance in 3D Basepair signature: cWW-cWW-cSH-cWW	0.00	-185.59	2	2
159	Motif group IL_54050.1 View motif instance in 3D Basepair signature: cWW-L-R-L-R-L-cWW-L-L	0.00	-186.25	12	8
160	Motif group IL_73759.1 View motif instance in 3D Basepair signature: cWW-cSH-tHS-cWH-cHW-cWW	0.00	-186.42	7	6	Part of G-quadruplex
161	Motif group IL_53448.1 View motif instance in 3D Basepair signature: cWW-tWH-cSH-cWW	0.00	-186.75	7	4	Receptor of 11-nt loop-receptor motif
162	Motif group IL_64048.1 View motif instance in 3D Basepair signature: cWW-L-cWW-L-L-tWH-R-L-R	0.00	-187.57	7	5
163	Motif group IL_88072.1 View motif instance in 3D Basepair signature: cWW-L-R-L-cWW-L-L-R-L-R-L	0.00	-188.18	8	6
164	Motif group IL_51265.3 View motif instance in 3D Basepair signature: cWW-tSS-tHS-tSH-cWW-L	0.00	-188.34	7	4	Kink-turn from U4
165	Motif group IL_42314.1 View motif instance in 3D Basepair signature: cWW-L-R-L-cWW	0.00	-188.60	5	3
166	Motif group IL_51454.3 View motif instance in 3D Basepair signature: cWW-cSH-cWW	0.00	-189.30	3	3	Minor groove platform
167	Motif group IL_13358.1 View motif instance in 3D Basepair signature: cWW-L-R-L-R-L-R-L-cWW-L-L	0.00	-191.12	11	9
168	Motif group IL_69229.3 View motif instance in 3D Basepair signature: cWW-L-tSH-L-tHS-cWW-cWW	0.00	-191.41	7	6	Kink-turn
169	Motif group IL_15698.3 View motif instance in 3D Basepair signature: cWW-L-R-L-cWW	0.00	-195.05	3	3
170	Motif group IL_58960.1 View motif instance in 3D Basepair signature: cWW-L-cWW-L-tWW-L-R-L	0.00	-195.34	8	4
171	Motif group IL_74367.1 View motif instance in 3D Basepair signature: cWW-L-R-L-R-L-R-cWW	0.00	-195.93	7	4
172	Motif group IL_85630.1 View motif instance in 3D Basepair signature: cWW-tSH-L-R-L-R-L-cWW-L-cWW-L	0.00	-196.91	11	9
173	Motif group IL_07039.3 View motif instance in 3D Basepair signature: cWW-L-cWW	0.00	-198.66	5	3	Major groove platform
174	Motif group IL_22854.4 View motif instance in 3D Basepair signature: cWW-tSH-cWW-tHW-R-L-cWW-L-L-R	0.00	-201.65	8	7
175	Motif group IL_94351.1 View motif instance in 3D Basepair signature: cWW-L-R-L-R-L-tHS-cWW	0.00	-204.21	6	5
176	Motif group IL_54177.4 View motif instance in 3D Basepair signature: cWW-cSW-tWH-L-R-L-R-tHS-cWW	0.00	-204.51	10	9
177	Motif group IL_99358.1 View motif instance in 3D Basepair signature: cWW-L-R-L-cWW	0.00	-204.78	4	3
178	Motif group IL_68405.1 View motif instance in 3D Basepair signature: cWW-cSS-L-tWH-tHW-cWW-cWW	0.00	-206.19	9	7	Kink-turn related
179	Motif group IL_01038.1 View motif instance in 3D Basepair signature: cWW-tWH-L-R-tHS-cWW	0.00	-206.31	8	6	UAA/GAN with extra stack
180	Motif group IL_04638.3 View motif instance in 3D Basepair signature: cWW-tSH-tHW-tHS-cSH-cWW-L	0.00	-207.08	8	7	tSH-tHS-tHW
181	Motif group IL_31915.1 View motif instance in 3D Basepair signature: cWW-L-R-L-R-L-R-L-R-L-R-L-cWW	0.00	-209.87	10	9
182	Motif group IL_33886.1 View motif instance in 3D Basepair signature: cWW-L-cWW-L-R-L-R-cWW	0.00	-209.93	8	6	Kink-turn with embedded cWW pair
183	Motif group IL_54041.2 View motif instance in 3D Basepair signature: cWW-L-R-L-R-tWH-L-cWW	0.00	-210.30	7	6	tHW-tHW cross-strand stack
184	Motif group IL_09044.1 View motif instance in 3D Basepair signature: cWW-tSH-tHH-L-tHS-cWW	0.00	-211.45	8	5
185	Motif group IL_11399.2 View motif instance in 3D Basepair signature: cWW-cHW-L-R-L-cWW	0.00	-213.05	7	4
186	Motif group IL_18487.1 View motif instance in 3D Basepair signature: cWW-L-R-L-R-L-R-L-cWW-cWW	0.00	-213.12	7	7
187	Motif group IL_73002.1 View motif instance in 3D Basepair signature: cWW-L-R-L-R-L-R-L-R-L-cWW-L-L-R	0.00	-213.87	11	11
188	Motif group IL_61286.1 View motif instance in 3D Basepair signature: cWW-L-R-L-R-L-tWH-L-tHS-cWW	0.00	-213.95	11	7	8x6 Sarcin-Ricin with inserted A; G-bulge
189	Motif group IL_61476.2 View motif instance in 3D Basepair signature: cWW-tSH-L-cWW-L	0.00	-214.55	6	2
190	Motif group IL_31558.1 View motif instance in 3D Basepair signature: cWW-L-tHS-L-R-cWW	0.00	-215.31	7	5
191	Motif group IL_42032.1 View motif instance in 3D Basepair signature: cWW-cSH-cWW-tWH-L-cWW-L-L	0.00	-215.38	5	4
192	Motif group IL_60657.1 View motif instance in 3D Basepair signature: cWW-cWW-L-R-L-cWW-L-L-R-L-R-L-R	0.00	-216.42	11	9
193	Motif group IL_64403.1 View motif instance in 3D Basepair signature: cWW-L-R-L-R-L-R-L-cWW-L-L-R	0.00	-217.94	12	9
194	Motif group IL_06300.1 View motif instance in 3D Basepair signature: cWW-L-R-L-R-L-cWW	0.00	-218.25	7	5
195	Motif group IL_80231.1 View motif instance in 3D Basepair signature: cWW-L-R-L-R-L-R-tHS-cWW	0.00	-220.22	4	4	Other IL
196	Motif group IL_75294.1 View motif instance in 3D Basepair signature: cWW-L-R-L-R-L-cWW	0.00	-220.49	8	5
197	Motif group IL_31531.3 View motif instance in 3D Basepair signature: cWW-L-R-L-cWW	0.00	-223.29	5	3	Decoding loop related
198	Motif group IL_04736.1 View motif instance in 3D Basepair signature: cWW-L-R-L-R-L-R-L-R-cWW	0.00	-223.60	10	8
199	Motif group IL_20047.1 View motif instance in 3D Basepair signature: cWW-tSH-tWH-cSH-cHW-cWH-cWW-cWW	0.00	-223.88	9	8
200	Motif group IL_04307.1 View motif instance in 3D Basepair signature: cWW-L-R-L-R-L-R-L-R-L-cWW-L-L-R	0.00	-225.88	11	9
201	Motif group IL_21200.1 View motif instance in 3D Basepair signature: cWW-tSH-tHW-L-cWW-L	0.00	-225.91	7	4	tSH-tHW
202	Motif group IL_37752.1 View motif instance in 3D Basepair signature: cWW-L-R-L-R-tHW-R-L-cWW	0.00	-226.87	10	8
203	Motif group IL_16458.4 View motif instance in 3D Basepair signature: cWW-L-R-L-R-cSH-tWH-tHS-cWW	0.00	-227.74	8	7	Sarcin-Ricin target in LSU H95; G-bulge
204	Motif group IL_67623.1 View motif instance in 3D Basepair signature: cWW-tSW-cSW-L-cSW-L-R-L-cWW-cWW	0.00	-229.06	10	9	Minor groove platform related
205	Motif group IL_91920.1 View motif instance in 3D Basepair signature: cWW-cWW-tHH-cWW	0.00	-229.31	5	4
206	Motif group IL_48444.6 View motif instance in 3D Basepair signature: cWW-L-R-cWW-cWW	0.00	-229.57	5	4
207	Motif group IL_61341.1 View motif instance in 3D Basepair signature: cWW-L-R-L-cWW	0.00	-230.14	7	4
208	Motif group IL_71598.1 View motif instance in 3D Basepair signature: cWW-tSH-L-cWW-L	0.00	-231.33	5	5
209	Motif group IL_88116.2 View motif instance in 3D Basepair signature: cWW-tSH-L-R-L-R-L-R-cWW-cWW	0.00	-231.52	10	8
210	Motif group IL_16218.2 View motif instance in 3D Basepair signature: cWW-L-R-L-R-L-cWW	0.00	-231.85	6	5
211	Motif group IL_05472.1 View motif instance in 3D Basepair signature: cWW-L-R-L-R-L-R-L-R-L-cWW-L	0.00	-233.08	10	9
212	Motif group IL_00555.1 View motif instance in 3D Basepair signature: cWW-cWS-cWW-L-R	0.00	-233.66	8	5
213	Motif group IL_46387.1 View motif instance in 3D Basepair signature: cWW-cWW-L-cWW-L	0.00	-234.01	6	3
214	Motif group IL_74746.1 View motif instance in 3D Basepair signature: cWW-L-R-L-R-L-R-L-R-L-R-L-R-cWW	0.00	-234.17	12	10
215	Motif group IL_70411.2 View motif instance in 3D Basepair signature: cWW-tSH-L-tHH-L-cWW	0.00	-234.18	7	5
216	Motif group IL_67780.1 View motif instance in 3D Basepair signature: cWW-cSH-L-R-L-L-R-L	0.00	-236.90	8	6
217	Motif group IL_70923.9 View motif instance in 3D Basepair signature: cWW-tSS-tSH-L-tHS-tHS-cWW	0.00	-238.73	6	5	Kink-turn
218	Motif group IL_29223.1 View motif instance in 3D Basepair signature: cWW-L-R-L-cWW-cWW-cWW	0.00	-239.14	8	6
219	Motif group IL_90351.1 View motif instance in 3D Basepair signature: cWW-L-R-L-cWW	0.00	-240.30	5	3
220	Motif group IL_58350.1 View motif instance in 3D Basepair signature: cWW-L-R-tWH-tWH-L-R-L-cWW-L	0.00	-241.11	8	8
221	Motif group IL_65718.4 View motif instance in 3D Basepair signature: cWW-cSH-cWS-cWW-cWW	0.00	-242.86	6	4
222	Motif group IL_81392.1 View motif instance in 3D Basepair signature: cWW-L-R-L-R-L-cWW-L-L-R-L	0.00	-243.56	15	13
223	Motif group IL_87290.1 View motif instance in 3D Basepair signature: cWW-L-R-L-R-L-R-L-R-L-R-L-R-L-R-L	0.00	-245.65	14	12	Kink-turn related
224	Motif group IL_70801.1 View motif instance in 3D Basepair signature: cWW-cWW-L-R-tWW-L-R-L-cWW	0.00	-246.14	10	6
225	Motif group IL_61242.1 View motif instance in 3D Basepair signature: cWW-cWW-L-R-L-R-cWW	0.00	-250.47	9	6
226	Motif group IL_23038.1 View motif instance in 3D Basepair signature: cWW-L-R-tWH-L-R-L-cWW-cWW	0.00	-251.01	9	7
227	Motif group IL_09129.2 View motif instance in 3D Basepair signature: cWW-L-R-tWH-L-R-L-tWW-cWW	0.00	-251.06	8	6
228	Motif group IL_59049.1 View motif instance in 3D Basepair signature: cWW-cWW-L-R-L-R-L-R-L-R-L-cWW-L	0.00	-251.92	10	10
229	Motif group IL_92446.2 View motif instance in 3D Basepair signature: cWW-cWW-R-L-L	0.00	-251.96	7	4
230	Motif group IL_01176.1 View motif instance in 3D Basepair signature: cWW-L-R-L-R-L-R-L-cWW	0.00	-252.04	11	7
231	Motif group IL_26793.1 View motif instance in 3D Basepair signature: cWW-L-cWW	0.00	-252.29	3	3	Single stack bend
232	Motif group IL_82292.1 View motif instance in 3D Basepair signature: cWW-L-R-L-R-L-R-L-R-cWW	0.00	-253.28	8	6
233	Motif group IL_28564.1 View motif instance in 3D Basepair signature: cWW-L-R-L-cWW	0.00	-256.47	5	4
234	Motif group IL_66798.2 View motif instance in 3D Basepair signature: cWW-L-R-L-R-tHS-cWW	0.00	-257.92	8	5	AAA cross-strand stack
235	Motif group IL_30441.1 View motif instance in 3D Basepair signature: cWW-cSH-tSW-tHW-cWW-L-L-R-L-L-R	0.00	-258.15	10	9
236	Motif group IL_42231.1 View motif instance in 3D Basepair signature: cWW-L-R-L-cWW-L-cWW-cSS-L	0.00	-259.04	11	10
237	Motif group IL_96303.1 View motif instance in 3D Basepair signature: cWW-cSH-tSW-tHW-cWW-L-L-R-L-R	0.00	-263.07	10	9
238	Motif group IL_36729.1 View motif instance in 3D Basepair signature: cWW-cWW-L-R-L-R-L-R-tWH-R-L-R-L-cWW	0.00	-264.45	10	10
239	Motif group IL_88269.4 View motif instance in 3D Basepair signature: cWW-tWW-cSH-tWH-tHS-cWW	0.00	-266.51	8	5	6x5 Sarcin-Ricin; G-bulge
240	Motif group IL_89505.4 View motif instance in 3D Basepair signature: cWW-L-cWW	0.00	-268.33	3	3	Single bulged U
241	Motif group IL_17973.1 View motif instance in 3D Basepair signature: cWW-cWW-L-cWW-L-L-R-L-R-L-R-L-R-L-R	0.00	-269.00	15	13
242	Motif group IL_97631.1 View motif instance in 3D Basepair signature: cWW-L-R-L-R-L-tHS-cWW	0.00	-269.63	8	6	Triple sheared related
243	Motif group IL_57188.5 View motif instance in 3D Basepair signature: cWW-tWW-L-tWW-cWW-cSH	0.00	-270.86	9	7	Kink-turn related
244	Motif group IL_51387.2 View motif instance in 3D Basepair signature: cWW-cSH-cWW-cWW	0.00	-271.38	5	3
245	Motif group IL_31462.6 View motif instance in 3D Basepair signature: cWW-L-cWW	0.00	-274.84	3	3	Single bulged A
246	Motif group IL_44465.1 View motif instance in 3D Basepair signature: cWW-L-R-cWW	0.00	-275.38	4	4	Isolated non-canonical cWW contact
247	Motif group IL_43467.1 View motif instance in 3D Basepair signature: cWW-L-R-L-R-L-R-L-R-L-cWW-L-L-R-L	0.00	-275.60	15	13	Pseudoknot
248	Motif group IL_34822.1 View motif instance in 3D Basepair signature: cWW-L-R-L-R-L-R-L-R-cWW	0.00	-276.69	9	6
249	Motif group IL_80398.1 View motif instance in 3D Basepair signature: cWW-L-cSW-L-R-cWW	0.00	-277.18	8	4	Minor groove platform
250	Motif group IL_21630.1 View motif instance in 3D Basepair signature: cWW-L-R-L-R-L-R-cSH-R-tWH-R-cWW-cWW	0.00	-278.69	10	10
251	Motif group IL_58126.1 View motif instance in 3D Basepair signature: cWW-L-R-L-R-L-R-L-R-L-R-L-cWW	0.00	-279.78	9	8
252	Motif group IL_64900.1 View motif instance in 3D Basepair signature: cWW-cWW-tSS-tSH-L-tHS-R-cWW-L	0.00	-279.93	9	7	Kink-turn
253	Motif group IL_28304.1 View motif instance in 3D Basepair signature: cWW-R-L-R-L-R-L-R-L-L-L-cWW-cWW	0.00	-280.26	14	12
254	Motif group IL_36516.3 View motif instance in 3D Basepair signature: cWW-cWW-cSH-cWW-L	0.00	-282.26	5	3
255	Motif group IL_60448.1 View motif instance in 3D Basepair signature: cWW-L-cWW-L-R-L-tWH-L-tHS-L-R-L-cWW-L-R	0.00	-282.60	14	12
256	Motif group IL_12745.1 View motif instance in 3D Basepair signature: cWW-tWH-tWH-tHW-tHW-cWW	0.00	-284.71	9	7	tWH-tWH-tHW-tHW
257	Motif group IL_91698.1 View motif instance in 3D Basepair signature: cWW-tWW-L-R-L-R-L-R-L-tHW-R-L-cWW	0.00	-284.75	12	10
258	Motif group IL_49867.1 View motif instance in 3D Basepair signature: cWW-cWW-L-R-L-R-tHW-R-L-L-cWW	0.00	-285.37	10	8
259	Motif group IL_61258.15 View motif instance in 3D Basepair signature: cWW-L-cWW	0.00	-285.85	5	4	Single bulged C
260	Motif group IL_12697.1 View motif instance in 3D Basepair signature: cWW-cWW-L-R-tHS-cWW	0.00	-288.05	6	6
261	Motif group IL_80926.1 View motif instance in 3D Basepair signature: cWW-cWW-tSH-tHS-L-cWW	0.00	-289.29	7	6
262	Motif group IL_14688.1 View motif instance in 3D Basepair signature: cWW-cWW-cWW	0.00	-291.10	5	3	Isolated non-canonical cWW pair
263	Motif group IL_32056.1 View motif instance in 3D Basepair signature: cWW-L-cWW-L-L-tWH-R-L-R-L	0.00	-291.24	7	6
264	Motif group IL_96759.1 View motif instance in 3D Basepair signature: cWW-tSH-tWW-cWW	0.00	-294.64	7	5
265	Motif group IL_71294.3 View motif instance in 3D Basepair signature: cWW-L-R-L-R-L-R-L-R-cWW	0.00	-295.27	8	6	Double sheared; A in syn; two near cWW pairs
266	Motif group IL_16386.4 View motif instance in 3D Basepair signature: cWW-L-cWW	0.00	-295.53	8	4
267	Motif group IL_62654.1 View motif instance in 3D Basepair signature: cWW-tSH-tHH-tHS-cWW	0.00	-295.66	7	5	tSH-tHH-tHS
268	Motif group IL_00981.1 View motif instance in 3D Basepair signature: cWW-tWH-tHH-tHS-cWW	0.00	-296.50	6	6	UAA/GAN with tHH
269	Motif group IL_55953.3 View motif instance in 3D Basepair signature: cWW-tSH-tHS-R-L-L-R-cWW	0.00	-297.15	8	7
270	Motif group IL_07785.1 View motif instance in 3D Basepair signature: cWW-cWW-cWW	0.00	-299.14	4	3	Isolated non-canonical cWW pair
271	Motif group IL_64231.5 View motif instance in 3D Basepair signature: cWW-cWW-L-R-L-cWW	0.00	-302.53	6	4
272	Motif group IL_04073.1 View motif instance in 3D Basepair signature: cWW-L-R-L-tSH-L-R-cWW-L-R-R-L-cWW-L	0.00	-303.25	14	14
273	Motif group IL_63519.1 View motif instance in 3D Basepair signature: cWW-cWW-L-R-cSH-cWW	0.00	-303.85	7	6
274	Motif group IL_06029.1 View motif instance in 3D Basepair signature: cWW-L-R-L-R-L-cWW-L-L-R-L-R-L-R-L	0.00	-304.25	16	14	Kink-turn
275	Motif group IL_41756.4 View motif instance in 3D Basepair signature: cWW-tSH-tHH-cSH-tWH-tHS-cWW-L	0.00	-306.63	8	7	8x6 Sarcin-Ricin with inserted Y; G-bulge
276	Motif group IL_51479.1 View motif instance in 3D Basepair signature: cWW-L-R-L-cWW	0.00	-306.91	6	4
277	Motif group IL_68243.1 View motif instance in 3D Basepair signature: cWW-L-cWW-cWW-R-L-tHS-cWW	0.00	-307.94	10	8
278	Motif group IL_68574.4 View motif instance in 3D Basepair signature: cWW-tHH-tHS-cWW	0.00	-308.70	6	4
279	Motif group IL_03350.1 View motif instance in 3D Basepair signature: cWW-tWH-cWW-L-L-cWW-L-L-L	0.00	-310.83	10	6	Reverse kink-turn related
280	Motif group IL_15107.1 View motif instance in 3D Basepair signature: cWW-R-L-R-L-R-L-R-L-R-L-R-L-L-L-cWW	0.00	-311.96	14	13
281	Motif group IL_19516.1 View motif instance in 3D Basepair signature: cWW-L-R-L-R-L-cWW-L-cWW-L-L-L-R-L-R	0.00	-313.24	13	11	Pseudoknot
282	Motif group IL_68909.1 View motif instance in 3D Basepair signature: cWW-L-R-L-R-L-cWW	0.00	-316.11	5	4
283	Motif group IL_67767.4 View motif instance in 3D Basepair signature: cWW-tWH-cWW-cSH-cWW	0.00	-318.77	7	4	Receptor of 11-nt loop-receptor motif
284	Motif group IL_47346.2 View motif instance in 3D Basepair signature: cWW-tSH-L-R-tHH-tHS-cWW	0.00	-319.57	7	6	tSH-tSH-tHH-tHS
285	Motif group IL_73700.1 View motif instance in 3D Basepair signature: cWW-L-R-L-cWW-L-cWW-tHS-cWW	0.00	-320.49	13	11
286	Motif group IL_70670.1 View motif instance in 3D Basepair signature: cWW-R-L-R-L-R-L-R-L-R-L-R-tWH-L-R-L	0.00	-324.54	14	12	9x9 Sarcin-Ricin with pseudoknotted region; G-bulge
287	Motif group IL_43547.1 View motif instance in 3D Basepair signature: cWW-tSH-tHH-cSH-tWH-tHS-R-L-cWW-L-cWW	0.00	-324.68	13	10	10x8 Sarcin-Ricin; G-bulge
288	Motif group IL_84694.2 View motif instance in 3D Basepair signature: cWW-L-R-tSH-tHW-tHH-tHS-cWW-cWW	0.00	-326.21	11	10	tSH-tHW-tHH-tHS
289	Motif group IL_02349.4 View motif instance in 3D Basepair signature: cWW-tSH-tWH-cSH-tWH-tHS-cWW	0.00	-326.76	10	8	8x6 Sarcin-Ricin with bulged A; G-bulge
290	Motif group IL_41344.1 View motif instance in 3D Basepair signature: cWW-L-R-L-cWW	0.00	-328.24	5	3
291	Motif group IL_00225.13 View motif instance in 3D Basepair signature: cWW-L-cWW	0.00	-328.25	4	4	Single bulged G
292	Motif group IL_24254.1 View motif instance in 3D Basepair signature: cWW-cWW-tHH-cSH-tWH-tHS-cWW	0.00	-329.56	10	7	7x6 Sarcin-Ricin with UU cWW pair; G-bulge
293	Motif group IL_04600.1 View motif instance in 3D Basepair signature: cWW-cWW-L-R-L-R-L-R-cWW-cWW	0.00	-333.70	9	8
294	Motif group IL_81731.1 View motif instance in 3D Basepair signature: cWW-cWW-L-R-L-R-L-cWW-L-tWW-L-R-L	0.00	-336.03	11	10
295	Motif group IL_93889.1 View motif instance in 3D Basepair signature: cWW-R-tSH-L-cSH-L-L-R-L-R-L-R-L-R-L-R-L-L	0.00	-336.57	15	14
296	Motif group IL_09990.4 View motif instance in 3D Basepair signature: cWW-L-R-L-cWW	0.00	-337.05	6	4
297	Motif group IL_10796.1 View motif instance in 3D Basepair signature: cWW-L-R-cWW	0.00	-339.74	6	5
298	Motif group IL_13874.1 View motif instance in 3D Basepair signature: cWW-cWH-tHS-cWW-cSH-cWH-cHW-cWW	0.00	-340.22	10	9
299	Motif group IL_10484.1 View motif instance in 3D Basepair signature: cWW-tSH-tHS-cWW	0.00	-341.90	6	4	Double sheared
300	Motif group IL_57744.1 View motif instance in 3D Basepair signature: cWW-cWW-cWW	0.00	-342.97	3	3	Isolated non-canonical cWW pair
301	Motif group IL_29198.2 View motif instance in 3D Basepair signature: cWW-cWW-L-R-cSH-R-tWH-tHS-cWW	0.00	-344.39	10	7	7x7 Sarcin-Ricin with intercalated A; G-bulge
302	Motif group IL_99692.2 View motif instance in 3D Basepair signature: cWW-tSS-tSH-L-R-R-L-cWW-L-L	0.00	-345.14	8	7	Kink-turn
303	Motif group IL_15991.1 View motif instance in 3D Basepair signature: cWW-L-R-L-R-L-R-L-R-L-R-L-R-L-R-L-cWW-L-L	0.00	-354.01	16	16
304	Motif group IL_38634.5 View motif instance in 3D Basepair signature: cWW-cWH-L-R-cWW	0.00	-359.00	7	7	cWH basepair and non-canonical AC
305	Motif group IL_45896.1 View motif instance in 3D Basepair signature: cWW-cWW-cWW	0.00	-359.73	17	15
306	Motif group IL_04021.2 View motif instance in 3D Basepair signature: cWW-L-R-tSH-tSH-tHS-cWW-cWW	0.00	-362.20	8	8	Triple sheared with non-canonical cWW
307	Motif group IL_58103.11 View motif instance in 3D Basepair signature: cWW-cSH-cWS-L-tSW-R-R-cWW	0.00	-364.65	5	5	Symmetric double minor groove platform
308	Motif group IL_13404.2 View motif instance in 3D Basepair signature: cWW-cWW-cWW-cWW	0.00	-365.81	7	4	Tandem non-canonical cWW pairs
309	Motif group IL_13394.1 View motif instance in 3D Basepair signature: cWW-L-R-L-R-L-R-L-R-L-R-L-R-L-R-L-R-L-R-L-R	0.00	-366.42	17	15
310	Motif group IL_34470.3 View motif instance in 3D Basepair signature: cWW-cSH-cWW-tHH-tWH-tHS-cWW-tSH-R-cWW-L	0.00	-367.80	10	9	9x8 Sarcin-Ricin with GA cWW pair; G-bulge
311	Motif group IL_99646.2 View motif instance in 3D Basepair signature: cWW-tWH-tHS-cWW	0.00	-368.60	7	4	tSH-tHW
312	Motif group IL_38507.2 View motif instance in 3D Basepair signature: cWW-tWH-L-tHS-cWW	0.00	-368.64	7	5	UAA/GAN
313	Motif group IL_76460.1 View motif instance in 3D Basepair signature: cWW-cWW-L-tHS-L-R-L-cWW-L-L-R-L-L-R-L-R-L-R	0.00	-368.98	16	15
314	Motif group IL_95727.1 View motif instance in 3D Basepair signature: cWW-L-tSH-L-tHW-tHS-R-cWW-L	0.00	-371.97	10	8	Kink-turn
315	Motif group IL_26307.2 View motif instance in 3D Basepair signature: cWW-tSH-tHH-cSH-tWH-tHS-cWW	0.00	-372.82	8	7	7x6 Sarcin-Ricin; G-bulge
316	Motif group IL_84251.1 View motif instance in 3D Basepair signature: cWW-L-tHS-cWW	0.00	-374.72	7	4
317	Motif group IL_65594.1 View motif instance in 3D Basepair signature: cWW-L-R-tSW-tHH-cSH-tWH-tHS-cWW	0.00	-376.06	9	8	8x7 Sarcin-Ricin; G-bulge
318	Motif group IL_49767.8 View motif instance in 3D Basepair signature: cWW-cWW-tWH-L-tHS-cWW	0.00	-379.46	8	7	UAA/GAN with extra cWW
319	Motif group IL_65653.1 View motif instance in 3D Basepair signature: cWW-tSW-tHW-tWW-tWH-cSH-L-L-tHS-L-cWW-L	0.00	-382.91	11	10
320	Motif group IL_80604.6 View motif instance in 3D Basepair signature: cWW-cWW-tWH-tWH-tHW-tHW-cWW	0.00	-383.18	9	8
321	Motif group IL_94910.1 View motif instance in 3D Basepair signature: cWW-tSS-tSH-L-R-R-L-cWW-L	0.00	-384.62	8	6	Kink-turn
322	Motif group IL_04346.10 View motif instance in 3D Basepair signature: cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW	0.00	-384.88	10	8	8x7 Sarcin-Ricin; G-bulge
323	Motif group IL_96371.1 View motif instance in 3D Basepair signature: cWW-tHH-cWW	0.00	-384.97	8	5
324	Motif group IL_65851.3 View motif instance in 3D Basepair signature: cWW-cWW-cWW-cWW-R-tHW-tSH-tHS-L	0.00	-385.26	9	7
325	Motif group IL_04785.1 View motif instance in 3D Basepair signature: cWW-L-R-L-R-cWW	0.00	-386.17	9	5
326	Motif group IL_43858.1 View motif instance in 3D Basepair signature: cWW-tSH-cSH-tWH-cSH-cHW-cWH-cWW-cWW	0.00	-386.21	11	10
327	Motif group IL_89021.2 View motif instance in 3D Basepair signature: cWW-L-R-L-R-tHS-cWW	0.00	-389.05	7	5	UAA/GAN
328	Motif group IL_32016.1 View motif instance in 3D Basepair signature: cWW-tSH-tSH-tSS-tHS-L-R-cWW	0.00	-389.63	9	6	Kink-turn
329	Motif group IL_42997.3 View motif instance in 3D Basepair signature: cWW-L-R-cWW	0.00	-391.04	5	4	Isolated cWS basepair
330	Motif group IL_59724.1 View motif instance in 3D Basepair signature: cWW-L-R-L-R-cSH-tWH-tHS-R-L-cWW	0.00	-394.76	11	8	8x7 Sarcin-Ricin with CC bifurcated pair; G-bulge
331	Motif group IL_85536.2 View motif instance in 3D Basepair signature: cWW-tSH-L-R-tHS-cWW-cWW	0.00	-401.39	8	6
332	Motif group IL_58112.2 View motif instance in 3D Basepair signature: cWW-cWW-L-R-cWW	0.00	-403.89	5	4
333	Motif group IL_89047.1 View motif instance in 3D Basepair signature: cWW-L-R-L-R-L-R-L-R-L-cWH-L-cWW	0.00	-404.21	11	11
334	Motif group IL_77045.1 View motif instance in 3D Basepair signature: cWW-L-tSW-L-tHW-cWW-L	0.00	-406.32	9	6	Kink-turn
335	Motif group IL_04332.3 View motif instance in 3D Basepair signature: cWW-L-R-L-cWW-L-L-R-L-R-L	0.00	-408.17	15	13
336	Motif group IL_29357.1 View motif instance in 3D Basepair signature: cWW-L-R-L-R-cWH-tHW-cSH-cWW-L-L-cWW-R-R	0.00	-410.63	14	13
337	Motif group IL_20245.1 View motif instance in 3D Basepair signature: cWW-L-R-L-R-L-R-L-R-L-R-L-R-L-cWW-L-L-R-L	0.00	-410.64	18	17
338	Motif group IL_57741.1 View motif instance in 3D Basepair signature: cWW-L-R-L-R-L-R-L-R-L-cWW-L-cWW	0.00	-411.16	11	11
339	Motif group IL_61249.1 View motif instance in 3D Basepair signature: cWW-L-R-L-R-tHS-cWW-cWW-tSH-tHS-cWW-cWW	0.00	-413.76	14	12
340	Motif group IL_85879.1 View motif instance in 3D Basepair signature: cWW-L-R-tHW-tHW-L-R-L-R-cWW-cWW	0.00	-414.45	12	11
341	Motif group IL_67095.2 View motif instance in 3D Basepair signature: cWW-tWW-cWW	0.00	-414.75	6	4	Isolated tWW turn
342	Motif group IL_79846.1 View motif instance in 3D Basepair signature: cWW-R-L-L-tWH-cWW-L-L-L-R-L-R-cSH-L-L	0.00	-418.95	13	11
343	Motif group IL_50715.3 View motif instance in 3D Basepair signature: cWW-tSH-tHH-L-R-L-R-L-tWW-L-cWW-L-L-L-R-L	0.00	-427.23	17	16
344	Motif group IL_77691.5 View motif instance in 3D Basepair signature: cWW-tSH-L-R-L-cWW	0.00	-430.21	5	4	UAA/GAN related
345	Motif group IL_80298.1 View motif instance in 3D Basepair signature: cWW-L-cWW-L-L-R-L-R-L-R-L-R-L-R-L-R-L-R-L-R-L-R	0.00	-437.54	19	18
346	Motif group IL_82426.6 View motif instance in 3D Basepair signature: cWW-cHW-R-L-cHW-cHW-cHW-L-cWW-R	0.00	-437.81	16	13
347	Motif group IL_19048.1 View motif instance in 3D Basepair signature: cWW-L-R-L-R-L-cSH-L-R-cWW-cWW	0.00	-438.49	11	10
348	Motif group IL_87907.2 View motif instance in 3D Basepair signature: cWW-cWW-cWW	0.00	-440.99	4	4	Isolated non-canonical cWW pair
349	Motif group IL_20463.1 View motif instance in 3D Basepair signature: cWW-tSH-tHW-cSH-tHH-cWH-L-R-cWW-L-L-R	0.00	-442.14	12	12	7x11 Sarcin-Ricin with pseudoknotted region; G-bulge
350	Motif group IL_28026.3 View motif instance in 3D Basepair signature: cWW-tSH-tWH-cWH-L-tHW-tSS-tHH-cWW	0.00	-443.01	11	8
351	Motif group IL_85599.2 View motif instance in 3D Basepair signature: cWW-tHS-cWW	0.00	-443.46	7	5	Isolated tHS basepair with bulges
352	Motif group IL_66663.1 View motif instance in 3D Basepair signature: cWW-L-tHS-tSW-tWH-cWH-cWW-L-cWW	0.00	-445.61	13	12
353	Motif group IL_09705.15 View motif instance in 3D Basepair signature: cWW-tSH-tHS-cWW	0.00	-445.94	6	4	Double sheared
354	Motif group IL_42218.2 View motif instance in 3D Basepair signature: cWW-L-R-cHW-cWW-L-L-L-R-L	0.00	-446.42	15	13
355	Motif group IL_17948.2 View motif instance in 3D Basepair signature: cWW-L-R-tSH-tHS-cWW	0.00	-451.25	6	5	Double sheared with non-canonical cWW
356	Motif group IL_69543.3 View motif instance in 3D Basepair signature: cWW-tSH-L-R-tSS-tHS-L-R-cWW	0.00	-452.07	10	8
357	Motif group IL_37015.1 View motif instance in 3D Basepair signature: cWW-tSS-tSS-tHH-L-tHS-L-R-cWW-L	0.00	-453.16	10	9	Kink-turn
358	Motif group IL_01488.3 View motif instance in 3D Basepair signature: cWW-tSS-tSH-L-R-tHS-L-cWW	0.00	-457.93	10	8	Kink-turn
359	Motif group IL_54737.1 View motif instance in 3D Basepair signature: cWW-L-R-L-R-L-R-L-R-L-R-L-R-L-R-L-R-L-R	0.00	-465.03	20	19
360	Motif group IL_10167.6 View motif instance in 3D Basepair signature: cWW-cHW-cWW	0.00	-465.11	5	4	Isolated cWH basepair
361	Motif group IL_34739.3 View motif instance in 3D Basepair signature: cWW-tWW-tWW-L-R-L-R-L-cWW-L-L-R-L-R-L-R-L-R	0.00	-465.14	18	18
362	Motif group IL_31504.1 View motif instance in 3D Basepair signature: cWW-cWW-cWS-tSH-L-tWH-cWW-tSS-tSH-L-R-L	0.00	-474.78	13	12
363	Motif group IL_23774.1 View motif instance in 3D Basepair signature: cWW-L-R-L-tHS-cWW	0.00	-475.83	6	4	UAA/GAN variation
364	Motif group IL_77658.1 View motif instance in 3D Basepair signature: cWW-cWW-cWW-cWW	0.00	-476.83	6	4	Tandem non-canonical cWW pairs
365	Motif group IL_49751.4 View motif instance in 3D Basepair signature: cWW-cWW-cWW-cWW-cWW	0.00	-478.99	6	4	Triple non-canonical cWW pairs
366	Motif group IL_25872.4 View motif instance in 3D Basepair signature: cWW-cWW-cWH-cWW	0.00	-491.33	6	4
367	Motif group IL_85033.2 View motif instance in 3D Basepair signature: cWW-cWW-cWW-cWW	0.00	-492.75	6	4	Tandem non-canonical cWW pairs
368	Motif group IL_29826.1 View motif instance in 3D Basepair signature: cWW-tSH-tHH-L-R-L-R-cSH-R-R-L-R-L-R-L-R-L-R-L-cWW	0.00	-497.55	21	20
369	Motif group IL_17069.5 View motif instance in 3D Basepair signature: cWW-tSH-tHH-cSS-tWW-tHH-tSS-cWW	0.00	-502.80	11	9	Kink-turn related
370	Motif group IL_38862.4 View motif instance in 3D Basepair signature: cWW-cSH-R-tWH-tHS-cWW	0.00	-520.03	7	5	5x5 Sarcin-Ricin with intercalated A; G-bulge
371	Motif group IL_60797.1 View motif instance in 3D Basepair signature: cWW-cWW-tSH-tHW-tHW-L-R-L-cWW-cWW	0.00	-522.92	14	12
372	Motif group IL_83149.1 View motif instance in 3D Basepair signature: cWW-tSH-tHH-L-R-L-R-L-R-L-R-L-R-L-R-L-cWW-L-cWW	0.00	-529.41	21	21
373	Motif group IL_53581.1 View motif instance in 3D Basepair signature: cWW-tWW-L-tWH-cSS-tSS-tWH-cSS-tWH-R-tSS-R-L-L-cWW-L-cWW	0.00	-551.56	17	16	Kink-turn related
374	Motif group IL_64858.3 View motif instance in 3D Basepair signature: cWW-cHW-cWH-R-L-cWH-cHW-cHW-cWH-cWH-cHW-L-cWW-L-R-cWW-L-cWW	0.00	-624.82	19	19
375	Motif group IL_69986.1 View motif instance in 3D Basepair signature: cWW-cHW-L-R-L-R-cWH-cWW	0.00	-1215.02	8	7
376	Motif group IL_89099.1 View motif instance in 3D Basepair signature: cWW-L-R-L-R-L-R-L-R-cWW	0.00	-1215.91	10	8	Other IL
377	Motif group IL_96788.1 View motif instance in 3D Basepair signature: cWW-tHW-tHS-cWW-cWW	0.00	-1265.72	7	6
378	Motif group IL_56455.6 View motif instance in 3D Basepair signature: cWW-tSH-tHW-L-R-L-R-L-R-tWH-tHS-cWW	0.00	-1338.09	12	11	Bacterial 5S Loop E
379	Motif group IL_76308.6 View motif instance in 3D Basepair signature: cWW-tSH-tHW-tHS-cWW-cWW	0.00	-1344.91	7	6	tSH-tWH-tHS-cWW
380	Motif group IL_87284.1 View motif instance in 3D Basepair signature: cWW-tSH-tHW-tWH-tHS-cWW	0.00	-1408.52	9	6	tSH-tHW-tWH-tHS
381	Motif group IL_06136.2 View motif instance in 3D Basepair signature: cWW-tHS-cWW-tHS-tSH-tSH-cWW	0.00	-1612.91	8	7	Quadruple sheared
382	Motif group IL_63596.11 View motif instance in 3D Basepair signature: cWW-cWS-cSH-tWH-cWW-L	0.00	-1662.51	5	3	C-loop
383	Motif group IL_61440.1 View motif instance in 3D Basepair signature: cWW-tSH-tHS-tWS-cWW	0.00	-1711.57	8	6	Triple sheared
384	Motif group IL_78800.1 View motif instance in 3D Basepair signature: cWW-cSH-L-cWW	0.00	-1796.12	5	4
385	Motif group IL_43644.1 View motif instance in 3D Basepair signature: cWW-cWW-L-R-cWW	0.00	-1854.80	7	4	Other IL
386	Motif group IL_02203.1 View motif instance in 3D Basepair signature: cWW-cSW-cWW-cWW	0.00	-1878.90	7	5
387	Motif group IL_17136.7 View motif instance in 3D Basepair signature: cWW-tSH-tHW-tHS-cWW	0.00	-1958.81	7	5	tSH-tWH-tHS
388	Motif group IL_03109.3 View motif instance in 3D Basepair signature: cWW-cWS-tWH-cWW-L	0.00	-2007.49	4	2	C-loop
389	Motif group IL_42771.1 View motif instance in 3D Basepair signature: cWW-cWW	0.00	-2046.09	4	3	Multiple bulged bases
390	Motif group IL_83150.2 View motif instance in 3D Basepair signature: cWW-tHH-cWW-L-L	0.00	-2064.56	6	4
391	Motif group IL_10569.1 View motif instance in 3D Basepair signature: cWW-L-cWW	0.00	-2077.34	4	3
392	Motif group IL_63775.1 View motif instance in 3D Basepair signature: cWW-L-cWW	0.00	-2102.98	8	4
393	Motif group IL_50730.2 View motif instance in 3D Basepair signature: cWW-tSH-tHS-tHS-cWW	0.00	-2163.46	7	6	Triple sheared
394	Motif group IL_28037.2 View motif instance in 3D Basepair signature: cWW-cWW-cWW	0.00	-2266.16	4	4	Isolated non-canonical cWW pair
395	Motif group IL_49971.1 View motif instance in 3D Basepair signature: cWW-cWH-cWW-cWW-L-L-R	0.00	-4382.83	9	6
396	Motif group IL_84409.1 View motif instance in 3D Basepair signature: cWW-tSS-L-cWH-L-cSH-cHW-tWH-cSS-tWH-tSW-cWS-R-L-R-cSH-R-cWW-L	0.00	-4555.74	20	18
397	Motif group IL_75283.2 View motif instance in 3D Basepair signature: cWW-tSS-L-R-L-tHS-L-cWW-L-tWH-tWH-L-L-R	0.00	-4708.97	13	10
398	Motif group IL_86012.1 View motif instance in 3D Basepair signature: cWW-tHS-tWH-cWH-cWW-L-L-cWW	0.00	-5064.31	12	10
399	Motif group IL_06691.1 View motif instance in 3D Basepair signature: cWW-cWS-L-R-L-R-cWW-L	0.00	-5213.48	7	6
400	Motif group IL_81516.2 View motif instance in 3D Basepair signature: cWW-cWS-tSH-L-tWH-cWW-tSS-tSH-L-R-L	0.00	-5284.78	11	10
401	Motif group IL_19852.1 View motif instance in 3D Basepair signature: cWW-tWH-cWW-cWH-cWH-cWH	0.00	-5288.72	11	8	Part of G-quadruplex
402	Motif group IL_46174.3 View motif instance in 3D Basepair signature: cWW-cSS-tSS-tSH-L-cWW-tHW-cWW	0.00	-5300.18	9	7	Kink-turn with non-sequential stacking
403	Motif group IL_44624.1 View motif instance in 3D Basepair signature: cWW-tWH-cWW-L-cWW-tSS-cSS-cWW-L	0.00	-5336.23	9	8
404	Motif group IL_17765.1 View motif instance in 3D Basepair signature: cWW-tWH-cHW-L-tSS-cSS-cWW-R-L	0.00	-5336.38	10	8
405	Motif group IL_07469.2 View motif instance in 3D Basepair signature: cWW-tSH-cWW-cSH-R-cWW	0.00	-5626.73	7	6
406	Motif group IL_38394.1 View motif instance in 3D Basepair signature: cWW-tWH-cWW-L-L-R-L	0.00	-6005.35	5	4
407	Motif group IL_22564.1 View motif instance in 3D Basepair signature: cWW-L-R-L-R-L-cWW	0.00	-6227.70	9	8
408	Motif group IL_96236.1 View motif instance in 3D Basepair signature: cWW-tWW-cWW-L-cWW	0.00	-6243.75	8	5
409	Motif group IL_24134.1 View motif instance in 3D Basepair signature: cWW-tSS-L-R-L-tHS-L-cWW-L-L	0.00	-6841.30	8	5	Kink-turn
410	Motif group IL_26222.2 View motif instance in 3D Basepair signature: cWW-cWS-cSH-tWH-R-L-R-cWW	0.00	-7004.02	8	5	C-loop with bulged stacked A's
411	Motif group IL_22373.1 View motif instance in 3D Basepair signature: cWW-L-R-cSH-cSH-cWW	0.00	-7214.73	5	4	8-nt loop receptor