JAR3D
Query RF02032-3.98 completed
Run on Motif Atlas Version
using the Rfam secondary structure. Run with the CaCoFold secondary structure.
Rfam family RF02032 maps to these 73 chains: 9L0R|1|A, 9L0R|1|B, 9L0R|1|C, 9L0R|1|D, 9L0R|1|E, 9L0R|1|F, 9L0R|1|G, 9L0R|1|H, 9L0R|1|I, 9L0R|1|J, 9L0R|1|K, 9L0R|1|L, 9LEC|1|J, 9LEE|1|A, 9LEE|1|B, 9LEE|1|C, 9LEE|1|D, 9LEE|1|E, 9LEE|1|F, 9LEE|1|G, 9LEE|1|H, 9LEE|1|I, 9LEE|1|J, 9LEL|1|J, 9LEM|1|A, 9LEM|1|B, 9LEM|1|C, 9LEM|1|D, 9LEM|1|E, 9LEM|1|F, 9LEM|1|G, 9LEM|1|H, 9LEM|1|I, 9LEM|1|J, 9LHK|1|G, 9LHL|1|A, 9LHL|1|B, 9LHL|1|C, 9LHL|1|D, 9LHL|1|E, 9LHL|1|F, 9LHL|1|G, 9LHL|1|H, 9LHL|1|I, 9LHL|1|J, 9LHL|1|K, 9LHL|1|L, 9LHL|1|M, 9LHL|1|N, 9LMF|1|A, 9LMF|1|B, 9LMF|1|C, 9LMF|1|D, 9LMF|1|E, 9LMF|1|F, 9LMF|1|G, 9LMF|1|H, 9LMF|1|I, 9LMF|1|J, 9MEE|1|A, 9MEE|1|B, 9MEE|1|C, 9MEE|1|D, 9MEE|1|E, 9MEE|1|F, 9MEE|1|G, 9MEE|1|H, 9MEE|1|I, 9MEE|1|J, 9MEE|1|K, 9MEE|1|L, 9MEE|1|M, 9MEE|1|N See more about them at RNA 3D Hub by filtering on the chain or the Rfam family.
Loop 8 Internal loop
Column numbers: 272-277, 289-295 - View nucleotides in PDB file(s)
Scored sequences and counts
C-A-AG*U-GA--G 4
G-ACAG*C-UU--C 2
U-G-AA*C-GA--U 2
GUA-AA*U-GAGAA 1
CCA-AG*U-GA-GG 1
CGA-UG*CUGA--G 1
AG-UUA*U-CC--U 1
AGG-GA*U-A--CU 1
CU-UUG*C-GG--G 1
GA-CGG*CCUA--- 1
GA-UAG*C-UU--C 1
A-A-AC*G-AA--U 1
A-A-AG*C-AA--U 1
A-A-AG*C-GA--U 1
A-A-AG*U-GA--U 1
A-G-AG*U-AA--U 1
AUG-A-*--GA-UU 1
C-G-AA*G-GA--C 1
G-A-AG*C-GA--C 1
G-G-UA*U-CC--U 1
U-A-GA*U-AU--A 1
U-G-AA*G-AC--A 1
U-G-AU*U-GA--C 1
U-G-UA*G-AA--A 1
G-U-GG*C-C---A 1
A-A-A-*--GA--U 1
A-G-A-*--AA--A 1
U-C--G*C-U---A 1
U-G-A-*--GU--C 1
A----A*U-----U 1
Click on headings to reorder table
| # | Matching motif group | Acceptance Rate | Mean Cutoff Score | Full Edit Distance | Interior Edit Distance | Basepair Diagram and most common annotation |
|---|---|---|---|---|---|---|
| 1 |
Motif group IL_09705.15
Basepair signature:
|
45.71 | -47.88 | 3 | 1 |
Double sheared |
| 2 |
Motif group IL_85033.2
Basepair signature:
|
42.86 | -31.41 | 4 | 1 |
Tandem non-canonical cWW pairs |
| 3 |
Motif group IL_48444.6
Basepair signature:
|
34.29 | -38.74 | 4 | 2 |
|
| 4 |
Motif group IL_10484.1
Basepair signature:
|
31.43 | -42.77 | 5 | 3 |
Double sheared |
| 5 |
Motif group IL_99358.1
Basepair signature:
|
31.43 | -50.73 | 4 | 2 |
|
| 6 |
Motif group IL_80398.1
Basepair signature:
|
31.43 | -57.97 | 5 | 2 |
Minor groove platform |
| 7 |
Motif group IL_41344.1
Basepair signature:
|
28.57 | -54.29 | 5 | 2 |
|
| 8 |
Motif group IL_58112.2
Basepair signature:
|
28.57 | -61.39 | 5 | 2 |
|
| 9 |
Motif group IL_77691.5
Basepair signature:
|
25.71 | -77.72 | 4 | 2 |
UAA/GAN related |
| 10 |
Motif group IL_23774.1
Basepair signature:
|
22.86 | -72.85 | 4 | 2 |
UAA/GAN variation |
| 11 |
Motif group IL_31558.1
Basepair signature:
|
20.00 | -52.55 | 6 | 3 |
|
| 12 |
Motif group IL_13404.2
Basepair signature:
|
14.29 | -48.87 | 5 | 3 |
Tandem non-canonical cWW pairs |
| 13 |
Motif group IL_71598.1
Basepair signature:
|
11.43 | -64.87 | 5 | 2 |
|
| 14 |
Motif group IL_51479.1
Basepair signature:
|
11.43 | -66.27 | 4 | 2 |
|
| 15 |
Motif group IL_04785.1
Basepair signature:
|
11.43 | -71.83 | 6 | 3 |
|
| 16 |
Motif group IL_64231.5
Basepair signature:
|
11.43 | -80.84 | 4 | 2 |
|
| 17 |
Motif group IL_84251.1
Basepair signature:
|
8.57 | -59.05 | 5 | 2 |
|
| 18 |
Motif group IL_70335.1
Basepair signature:
|
8.57 | -63.00 | 6 | 4 |
|
| 19 |
Motif group IL_68909.1
Basepair signature:
|
8.57 | -63.42 | 5 | 3 |
|
| 20 |
Motif group IL_74367.1
Basepair signature:
|
8.57 | -86.44 | 7 | 4 |
|
| 21 |
Motif group IL_14688.1
Basepair signature:
|
8.57 | -103.69 | 4 | 2 |
Isolated non-canonical cWW pair |
| 22 |
Motif group IL_81522.2
Basepair signature:
|
8.57 | -128.38 | 6 | 4 |
Major groove minor groove platform with intercalation; mini C-loop |
| 23 |
Motif group IL_06300.1
Basepair signature:
|
5.71 | -45.26 | 5 | 3 |
|
| 24 |
Motif group IL_28564.1
Basepair signature:
|
5.71 | -65.91 | 6 | 3 |
|
| 25 |
Motif group IL_01038.1
Basepair signature:
|
5.71 | -81.82 | 7 | 4 |
UAA/GAN with extra stack |
| 26 |
Motif group IL_78800.1
Basepair signature:
|
5.71 | -83.46 | 6 | 3 |
|
| 27 |
Motif group IL_38507.2
Basepair signature:
|
5.71 | -87.99 | 4 | 2 |
UAA/GAN |
| 28 |
Motif group IL_08770.1
Basepair signature:
|
5.71 | -94.00 | 4 | 2 |
|
| 29 |
Motif group IL_70096.1
Basepair signature:
|
5.71 | -95.27 | 7 | 5 |
Kink-turn related |
| 30 |
Motif group IL_57744.1
Basepair signature:
|
5.71 | -95.78 | 3 | 1 |
Isolated non-canonical cWW pair |
| 31 |
Motif group IL_26728.3
Basepair signature:
|
5.71 | -103.00 | 6 | 4 |
|
| 32 |
Motif group IL_31737.3
Basepair signature:
|
5.71 | -111.10 | 4 | 2 |
Stack and bulge |
| 33 |
Motif group IL_42997.3
Basepair signature:
|
5.71 | -128.63 | 3 | 2 |
Isolated cWS basepair |
| 34 |
Motif group IL_42771.1
Basepair signature:
|
5.71 | -190.64 | 4 | 3 |
Multiple bulged bases |
| 35 |
Motif group IL_81831.1
Basepair signature:
|
5.71 | -206.44 | 5 | 3 |
Intercalated cWS |
| 36 |
Motif group IL_21001.1
Basepair signature:
|
2.86 | -65.77 | 6 | 3 |
|
| 37 |
Motif group IL_68574.4
Basepair signature:
|
2.86 | -68.35 | 5 | 3 |
|
| 38 |
Motif group IL_05192.4
Basepair signature:
|
2.86 | -72.19 | 5 | 3 |
|
| 39 |
Motif group IL_61242.1
Basepair signature:
|
2.86 | -72.86 | 7 | 5 |
|
| 40 |
Motif group IL_25186.4
Basepair signature:
|
2.86 | -75.69 | 6 | 4 |
|
| 41 |
Motif group IL_25872.4
Basepair signature:
|
2.86 | -77.09 | 5 | 2 |
|
| 42 |
Motif group IL_99646.2
Basepair signature:
|
2.86 | -83.98 | 4 | 2 |
tSH-tHW |
| 43 |
Motif group IL_66798.2
Basepair signature:
|
2.86 | -84.69 | 5 | 3 |
AAA cross-strand stack |
| 44 |
Motif group IL_43644.1
Basepair signature:
|
2.86 | -86.53 | 5 | 3 |
Other IL |
| 45 |
Motif group IL_62654.1
Basepair signature:
|
2.86 | -91.43 | 6 | 4 |
tSH-tHH-tHS |
| 46 |
Motif group IL_70627.3
Basepair signature:
|
2.86 | -93.08 | 6 | 4 |
UAA/GAN related |
| 47 |
Motif group IL_07785.1
Basepair signature:
|
2.86 | -94.45 | 4 | 2 |
Isolated non-canonical cWW pair |
| 48 |
Motif group IL_76758.2
Basepair signature:
|
2.86 | -94.68 | 6 | 5 |
Intercalated tWH |
| 49 |
Motif group IL_61440.1
Basepair signature:
|
2.86 | -97.07 | 6 | 3 |
Triple sheared |
| 50 |
Motif group IL_02203.1
Basepair signature:
|
2.86 | -98.60 | 6 | 4 |
|
| 51 |
Motif group IL_61341.1
Basepair signature:
|
2.86 | -108.99 | 5 | 2 |
|
| 52 |
Motif group IL_83389.2
Basepair signature:
|
2.86 | -109.52 | 4 | 2 |
|
| 53 |
Motif group IL_71294.3
Basepair signature:
|
2.86 | -111.21 | 7 | 5 |
Double sheared; A in syn; two near cWW pairs |
| 54 |
Motif group IL_89021.2
Basepair signature:
|
2.86 | -111.67 | 5 | 3 |
UAA/GAN |
| 55 |
Motif group IL_17948.2
Basepair signature:
|
2.86 | -114.64 | 5 | 3 |
Double sheared with non-canonical cWW |
| 56 |
Motif group IL_84476.1
Basepair signature:
|
2.86 | -123.37 | 5 | 3 |
Multiple bulged bases |
| 57 |
Motif group IL_82107.4
Basepair signature:
|
2.86 | -143.23 | 4 | 2 |
Multiple bulged bases |
| 58 |
Motif group IL_87907.2
Basepair signature:
|
2.86 | -150.17 | 3 | 2 |
Isolated non-canonical cWW pair |
| 59 |
Motif group IL_44465.1
Basepair signature:
|
2.86 | -152.10 | 4 | 2 |
Isolated non-canonical cWW contact |
| 60 |
Motif group IL_10167.6
Basepair signature:
|
2.86 | -161.16 | 3 | 2 |
Isolated cWH basepair |
| 61 |
Motif group IL_67095.2
Basepair signature:
|
2.86 | -166.61 | 4 | 3 |
Isolated tWW turn |
| 62 |
Motif group IL_07039.3
Basepair signature:
|
2.86 | -205.18 | 4 | 3 |
Major groove platform |
| 63 |
Motif group IL_66635.5
Basepair signature:
|
2.86 | -206.12 | 4 | 3 |
Major groove intercalation |
| 64 |
Motif group IL_73452.2
Basepair signature:
|
2.86 | -209.45 | 5 | 3 |
|
| 65 |
Motif group IL_33761.2
Basepair signature:
|
2.86 | -211.14 | 5 | 3 |
|
| 66 |
Motif group IL_10796.1
Basepair signature:
|
2.86 | -222.13 | 6 | 4 |
|
| 67 |
Motif group IL_28037.2
Basepair signature:
|
2.86 | -243.86 | 4 | 4 |
Isolated non-canonical cWW pair |
| 68 |
Motif group IL_90729.1
Basepair signature:
|
2.86 | -267.91 | 4 | 3 |
Single stack bend |
| 69 |
Motif group IL_26793.1
Basepair signature:
|
2.86 | -286.54 | 4 | 3 |
Single stack bend |
| 70 |
Motif group IL_16386.4
Basepair signature:
|
2.86 | -301.17 | 6 | 4 |
|
| 71 |
Motif group IL_00225.13
Basepair signature:
|
2.86 | -317.11 | 4 | 4 |
Single bulged G |
| 72 |
Motif group IL_61258.15
Basepair signature:
|
2.86 | -348.09 | 4 | 4 |
Single bulged C |
| 73 |
Motif group IL_91920.1
Basepair signature:
|
0.00 | -54.93 | 5 | 3 |
|
| 74 |
Motif group IL_62012.1
Basepair signature:
|
0.00 | -55.89 | 6 | 3 |
Decoding loop related |
| 75 |
Motif group IL_45444.1
Basepair signature:
|
0.00 | -60.69 | 7 | 3 |
|
| 76 |
Motif group IL_75294.1
Basepair signature:
|
0.00 | -63.33 | 6 | 3 |
|
| 77 |
Motif group IL_34737.1
Basepair signature:
|
0.00 | -64.56 | 7 | 4 |
|
| 78 |
Motif group IL_90346.1
Basepair signature:
|
0.00 | -69.55 | 6 | 4 |
|
| 79 |
Motif group IL_69145.3
Basepair signature:
|
0.00 | -70.40 | 6 | 4 |
Pseudoknot |
| 80 |
Motif group IL_47108.1
Basepair signature:
|
0.00 | -73.00 | 5 | 3 |
|
| 81 |
Motif group IL_29471.1
Basepair signature:
|
0.00 | -73.91 | 6 | 4 |
|
| 82 |
Motif group IL_82683.2
Basepair signature:
|
0.00 | -74.41 | 7 | 4 |
|
| 83 |
Motif group IL_11344.2
Basepair signature:
|
0.00 | -74.89 | 6 | 4 |
180 degree turn |
| 84 |
Motif group IL_11399.2
Basepair signature:
|
0.00 | -75.43 | 5 | 3 |
|
| 85 |
Motif group IL_16218.2
Basepair signature:
|
0.00 | -76.75 | 6 | 4 |
|
| 86 |
Motif group IL_97631.1
Basepair signature:
|
0.00 | -78.33 | 6 | 4 |
Triple sheared related |
| 87 |
Motif group IL_21667.1
Basepair signature:
|
0.00 | -80.06 | 6 | 4 |
|
| 88 |
Motif group IL_96788.1
Basepair signature:
|
0.00 | -80.30 | 7 | 4 |
|
| 89 |
Motif group IL_96332.5
Basepair signature:
|
0.00 | -81.78 | 6 | 4 |
|
| 90 |
Motif group IL_38634.5
Basepair signature:
|
0.00 | -81.83 | 6 | 4 |
cWH basepair and non-canonical AC |
| 91 |
Motif group IL_99498.1
Basepair signature:
|
0.00 | -84.12 | 7 | 5 |
|
| 92 |
Motif group IL_56317.1
Basepair signature:
|
0.00 | -84.88 | 7 | 5 |
|
| 93 |
Motif group IL_49612.1
Basepair signature:
|
0.00 | -85.47 | 7 | 5 |
|
| 94 |
Motif group IL_65718.4
Basepair signature:
|
0.00 | -86.21 | 7 | 4 |
|
| 95 |
Motif group IL_67780.1
Basepair signature:
|
0.00 | -87.38 | 7 | 4 |
|
| 96 |
Motif group IL_94351.1
Basepair signature:
|
0.00 | -88.01 | 7 | 5 |
|
| 97 |
Motif group IL_77658.1
Basepair signature:
|
0.00 | -88.65 | 4 | 2 |
Tandem non-canonical cWW pairs |
| 98 |
Motif group IL_63519.1
Basepair signature:
|
0.00 | -89.17 | 6 | 4 |
|
| 99 |
Motif group IL_12697.1
Basepair signature:
|
0.00 | -89.37 | 7 | 4 |
|
| 100 |
Motif group IL_42778.1
Basepair signature:
|
0.00 | -90.52 | 7 | 5 |
|
| 101 |
Motif group IL_21200.1
Basepair signature:
|
0.00 | -91.32 | 5 | 3 |
tSH-tHW |
| 102 |
Motif group IL_01176.1
Basepair signature:
|
0.00 | -92.07 | 7 | 5 |
|
| 103 |
Motif group IL_88269.4
Basepair signature:
|
0.00 | -92.59 | 6 | 4 |
6x5 Sarcin-Ricin; G-bulge |
| 104 |
Motif group IL_42314.1
Basepair signature:
|
0.00 | -93.39 | 5 | 3 |
|
| 105 |
Motif group IL_11415.1
Basepair signature:
|
0.00 | -93.96 | 6 | 4 |
|
| 106 |
Motif group IL_29223.1
Basepair signature:
|
0.00 | -94.28 | 8 | 6 |
|
| 107 |
Motif group IL_73759.1
Basepair signature:
|
0.00 | -94.91 | 7 | 5 |
Part of G-quadruplex |
| 108 |
Motif group IL_70411.2
Basepair signature:
|
0.00 | -95.49 | 6 | 4 |
|
| 109 |
Motif group IL_67767.4
Basepair signature:
|
0.00 | -97.27 | 6 | 3 |
Receptor of 11-nt loop-receptor motif |
| 110 |
Motif group IL_47972.1
Basepair signature:
|
0.00 | -97.51 | 5 | 3 |
|
| 111 |
Motif group IL_59258.1
Basepair signature:
|
0.00 | -99.81 | 7 | 5 |
|
| 112 |
Motif group IL_33886.1
Basepair signature:
|
0.00 | -100.32 | 7 | 5 |
Kink-turn with embedded cWW pair |
| 113 |
Motif group IL_44874.1
Basepair signature:
|
0.00 | -100.77 | 7 | 4 |
tSH-tHW |
| 114 |
Motif group IL_85222.1
Basepair signature:
|
0.00 | -101.97 | 8 | 6 |
|
| 115 |
Motif group IL_00981.1
Basepair signature:
|
0.00 | -102.29 | 6 | 4 |
UAA/GAN with tHH |
| 116 |
Motif group IL_85652.1
Basepair signature:
|
0.00 | -102.32 | 8 | 5 |
|
| 117 |
Motif group IL_33141.1
Basepair signature:
|
0.00 | -102.35 | 8 | 6 |
|
| 118 |
Motif group IL_82292.1
Basepair signature:
|
0.00 | -103.13 | 6 | 4 |
|
| 119 |
Motif group IL_49751.4
Basepair signature:
|
0.00 | -103.52 | 5 | 2 |
Triple non-canonical cWW pairs |
| 120 |
Motif group IL_73789.1
Basepair signature:
|
0.00 | -104.60 | 7 | 4 |
|
| 121 |
Motif group IL_91636.1
Basepair signature:
|
0.00 | -105.36 | 8 | 5 |
|
| 122 |
Motif group IL_10389.1
Basepair signature:
|
0.00 | -105.44 | 5 | 3 |
|
| 123 |
Motif group IL_09908.1
Basepair signature:
|
0.00 | -105.90 | 8 | 5 |
Reverse kink-turn |
| 124 |
Motif group IL_76319.5
Basepair signature:
|
0.00 | -106.26 | 7 | 4 |
|
| 125 |
Motif group IL_09044.1
Basepair signature:
|
0.00 | -106.86 | 7 | 4 |
|
| 126 |
Motif group IL_80926.1
Basepair signature:
|
0.00 | -107.01 | 7 | 5 |
|
| 127 |
Motif group IL_80231.1
Basepair signature:
|
0.00 | -107.10 | 6 | 4 |
Other IL |
| 128 |
Motif group IL_19102.1
Basepair signature:
|
0.00 | -107.62 | 6 | 3 |
|
| 129 |
Motif group IL_14177.2
Basepair signature:
|
0.00 | -108.98 | 6 | 4 |
|
| 130 |
Motif group IL_66997.2
Basepair signature:
|
0.00 | -109.24 | 6 | 3 |
|
| 131 |
Motif group IL_92446.2
Basepair signature:
|
0.00 | -110.01 | 6 | 3 |
|
| 132 |
Motif group IL_53448.1
Basepair signature:
|
0.00 | -110.64 | 6 | 3 |
Receptor of 11-nt loop-receptor motif |
| 133 |
Motif group IL_07173.1
Basepair signature:
|
0.00 | -110.74 | 6 | 5 |
|
| 134 |
Motif group IL_89984.3
Basepair signature:
|
0.00 | -111.54 | 6 | 4 |
|
| 135 |
Motif group IL_82706.1
Basepair signature:
|
0.00 | -113.10 | 8 | 6 |
|
| 136 |
Motif group IL_90351.1
Basepair signature:
|
0.00 | -113.37 | 4 | 2 |
|
| 137 |
Motif group IL_98347.1
Basepair signature:
|
0.00 | -113.67 | 6 | 4 |
|
| 138 |
Motif group IL_31084.1
Basepair signature:
|
0.00 | -114.49 | 8 | 5 |
|
| 139 |
Motif group IL_51191.1
Basepair signature:
|
0.00 | -114.80 | 8 | 5 |
|
| 140 |
Motif group IL_57881.1
Basepair signature:
|
0.00 | -114.86 | 7 | 4 |
Multiple bulged bases |
| 141 |
Motif group IL_97697.1
Basepair signature:
|
0.00 | -115.83 | 8 | 6 |
Reverse turn |
| 142 |
Motif group IL_89099.1
Basepair signature:
|
0.00 | -116.01 | 8 | 5 |
Other IL |
| 143 |
Motif group IL_28788.1
Basepair signature:
|
0.00 | -116.11 | 6 | 3 |
|
| 144 |
Motif group IL_44438.1
Basepair signature:
|
0.00 | -116.66 | 8 | 6 |
|
| 145 |
Motif group IL_55516.2
Basepair signature:
|
0.00 | -116.92 | 4 | 2 |
|
| 146 |
Motif group IL_19668.1
Basepair signature:
|
0.00 | -117.63 | 5 | 3 |
Isolated non-canonical cWW pair |
| 147 |
Motif group IL_69000.1
Basepair signature:
|
0.00 | -118.74 | 7 | 5 |
|
| 148 |
Motif group IL_55953.3
Basepair signature:
|
0.00 | -119.18 | 8 | 5 |
|
| 149 |
Motif group IL_69986.1
Basepair signature:
|
0.00 | -119.52 | 7 | 5 |
|
| 150 |
Motif group IL_43622.1
Basepair signature:
|
0.00 | -119.78 | 6 | 4 |
|
| 151 |
Motif group IL_61476.2
Basepair signature:
|
0.00 | -122.35 | 4 | 2 |
|
| 152 |
Motif group IL_68405.1
Basepair signature:
|
0.00 | -122.50 | 8 | 6 |
Kink-turn related |
| 153 |
Motif group IL_69440.3
Basepair signature:
|
0.00 | -123.10 | 5 | 3 |
|
| 154 |
Motif group IL_33623.1
Basepair signature:
|
0.00 | -123.90 | 8 | 6 |
|
| 155 |
Motif group IL_09570.1
Basepair signature:
|
0.00 | -124.88 | 9 | 7 |
|
| 156 |
Motif group IL_95570.1
Basepair signature:
|
0.00 | -125.53 | 5 | 3 |
|
| 157 |
Motif group IL_91592.1
Basepair signature:
|
0.00 | -126.10 | 7 | 5 |
|
| 158 |
Motif group IL_96236.1
Basepair signature:
|
0.00 | -126.34 | 7 | 4 |
|
| 159 |
Motif group IL_31531.3
Basepair signature:
|
0.00 | -127.44 | 3 | 1 |
Decoding loop related |
| 160 |
Motif group IL_49767.8
Basepair signature:
|
0.00 | -127.64 | 6 | 4 |
UAA/GAN with extra cWW |
| 161 |
Motif group IL_85536.2
Basepair signature:
|
0.00 | -128.31 | 6 | 4 |
|
| 162 |
Motif group IL_17136.7
Basepair signature:
|
0.00 | -129.14 | 5 | 3 |
tSH-tWH-tHS |
| 163 |
Motif group IL_87284.1
Basepair signature:
|
0.00 | -129.89 | 6 | 4 |
tSH-tHW-tWH-tHS |
| 164 |
Motif group IL_80412.1
Basepair signature:
|
0.00 | -130.01 | 9 | 7 |
|
| 165 |
Motif group IL_88082.1
Basepair signature:
|
0.00 | -130.30 | 7 | 5 |
|
| 166 |
Motif group IL_25463.1
Basepair signature:
|
0.00 | -130.41 | 6 | 3 |
|
| 167 |
Motif group IL_76308.6
Basepair signature:
|
0.00 | -131.92 | 6 | 5 |
tSH-tWH-tHS-cWW |
| 168 |
Motif group IL_34822.1
Basepair signature:
|
0.00 | -132.33 | 7 | 6 |
|
| 169 |
Motif group IL_96371.1
Basepair signature:
|
0.00 | -132.43 | 6 | 3 |
|
| 170 |
Motif group IL_59302.1
Basepair signature:
|
0.00 | -132.64 | 5 | 4 |
|
| 171 |
Motif group IL_96759.1
Basepair signature:
|
0.00 | -133.31 | 5 | 2 |
|
| 172 |
Motif group IL_44325.1
Basepair signature:
|
0.00 | -135.15 | 6 | 3 |
|
| 173 |
Motif group IL_77870.1
Basepair signature:
|
0.00 | -135.31 | 8 | 6 |
|
| 174 |
Motif group IL_38862.4
Basepair signature:
|
0.00 | -136.47 | 5 | 3 |
5x5 Sarcin-Ricin with intercalated A; G-bulge |
| 175 |
Motif group IL_31561.1
Basepair signature:
|
0.00 | -136.52 | 8 | 6 |
|
| 176 |
Motif group IL_70801.1
Basepair signature:
|
0.00 | -136.98 | 8 | 6 |
|
| 177 |
Motif group IL_78472.1
Basepair signature:
|
0.00 | -137.23 | 9 | 6 |
|
| 178 |
Motif group IL_50730.2
Basepair signature:
|
0.00 | -137.33 | 4 | 3 |
Triple sheared |
| 179 |
Motif group IL_49061.1
Basepair signature:
|
0.00 | -137.93 | 4 | 2 |
|
| 180 |
Motif group IL_54041.2
Basepair signature:
|
0.00 | -139.91 | 7 | 6 |
tHW-tHW cross-strand stack |
| 181 |
Motif group IL_37603.1
Basepair signature:
|
0.00 | -140.86 | 9 | 6 |
|
| 182 |
Motif group IL_22829.2
Basepair signature:
|
0.00 | -143.38 | 7 | 4 |
|
| 183 |
Motif group IL_24254.1
Basepair signature:
|
0.00 | -143.60 | 9 | 5 |
7x6 Sarcin-Ricin with UU cWW pair; G-bulge |
| 184 |
Motif group IL_61438.4
Basepair signature:
|
0.00 | -143.89 | 5 | 3 |
|
| 185 |
Motif group IL_26307.2
Basepair signature:
|
0.00 | -144.24 | 6 | 5 |
7x6 Sarcin-Ricin; G-bulge |
| 186 |
Motif group IL_15698.3
Basepair signature:
|
0.00 | -145.27 | 4 | 3 |
|
| 187 |
Motif group IL_04736.1
Basepair signature:
|
0.00 | -145.51 | 8 | 6 |
|
| 188 |
Motif group IL_47346.2
Basepair signature:
|
0.00 | -146.01 | 7 | 5 |
tSH-tSH-tHH-tHS |
| 189 |
Motif group IL_64842.1
Basepair signature:
|
0.00 | -146.09 | 8 | 6 |
|
| 190 |
Motif group IL_16458.4
Basepair signature:
|
0.00 | -146.73 | 8 | 5 |
Sarcin-Ricin target in LSU H95; G-bulge |
| 191 |
Motif group IL_20047.1
Basepair signature:
|
0.00 | -148.30 | 8 | 7 |
|
| 192 |
Motif group IL_12745.1
Basepair signature:
|
0.00 | -148.84 | 9 | 6 |
tWH-tWH-tHW-tHW |
| 193 |
Motif group IL_12566.4
Basepair signature:
|
0.00 | -149.09 | 6 | 3 |
|
| 194 |
Motif group IL_46387.1
Basepair signature:
|
0.00 | -149.52 | 5 | 3 |
|
| 195 |
Motif group IL_06136.2
Basepair signature:
|
0.00 | -149.57 | 7 | 4 |
Quadruple sheared |
| 196 |
Motif group IL_78349.3
Basepair signature:
|
0.00 | -151.57 | 8 | 6 |
|
| 197 |
Motif group IL_41853.1
Basepair signature:
|
0.00 | -155.16 | 8 | 6 |
|
| 198 |
Motif group IL_04600.1
Basepair signature:
|
0.00 | -156.13 | 8 | 6 |
|
| 199 |
Motif group IL_77278.1
Basepair signature:
|
0.00 | -156.51 | 9 | 7 |
|
| 200 |
Motif group IL_85599.2
Basepair signature:
|
0.00 | -156.59 | 4 | 3 |
Isolated tHS basepair with bulges |
| 201 |
Motif group IL_06549.2
Basepair signature:
|
0.00 | -156.95 | 5 | 3 |
|
| 202 |
Motif group IL_16665.1
Basepair signature:
|
0.00 | -157.63 | 9 | 7 |
|
| 203 |
Motif group IL_88116.2
Basepair signature:
|
0.00 | -158.71 | 8 | 6 |
|
| 204 |
Motif group IL_51387.2
Basepair signature:
|
0.00 | -159.75 | 5 | 2 |
|
| 205 |
Motif group IL_86136.1
Basepair signature:
|
0.00 | -160.48 | 7 | 5 |
|
| 206 |
Motif group IL_82741.2
Basepair signature:
|
0.00 | -160.48 | 6 | 4 |
|
| 207 |
Motif group IL_61286.1
Basepair signature:
|
0.00 | -160.63 | 9 | 6 |
8x6 Sarcin-Ricin with inserted A; G-bulge |
| 208 |
Motif group IL_23038.1
Basepair signature:
|
0.00 | -160.85 | 8 | 7 |
|
| 209 |
Motif group IL_69229.3
Basepair signature:
|
0.00 | -162.91 | 7 | 6 |
Kink-turn |
| 210 |
Motif group IL_09990.4
Basepair signature:
|
0.00 | -163.20 | 6 | 3 |
|
| 211 |
Motif group IL_57188.5
Basepair signature:
|
0.00 | -165.13 | 7 | 5 |
Kink-turn related |
| 212 |
Motif group IL_32016.1
Basepair signature:
|
0.00 | -167.16 | 8 | 5 |
Kink-turn |
| 213 |
Motif group IL_29198.2
Basepair signature:
|
0.00 | -167.27 | 8 | 6 |
7x7 Sarcin-Ricin with intercalated A; G-bulge |
| 214 |
Motif group IL_24499.1
Basepair signature:
|
0.00 | -173.02 | 8 | 6 |
|
| 215 |
Motif group IL_18487.1
Basepair signature:
|
0.00 | -173.22 | 9 | 6 |
|
| 216 |
Motif group IL_09129.2
Basepair signature:
|
0.00 | -176.21 | 9 | 7 |
|
| 217 |
Motif group IL_41756.4
Basepair signature:
|
0.00 | -176.57 | 8 | 6 |
8x6 Sarcin-Ricin with inserted Y; G-bulge |
| 218 |
Motif group IL_68243.1
Basepair signature:
|
0.00 | -176.97 | 9 | 7 |
|
| 219 |
Motif group IL_02349.4
Basepair signature:
|
0.00 | -177.91 | 8 | 6 |
8x6 Sarcin-Ricin with bulged A; G-bulge |
| 220 |
Motif group IL_74957.1
Basepair signature:
|
0.00 | -178.09 | 8 | 6 |
cWH basepair with bulged bases |
| 221 |
Motif group IL_74051.1
Basepair signature:
|
0.00 | -178.21 | 7 | 5 |
Kink-turn |
| 222 |
Motif group IL_04021.2
Basepair signature:
|
0.00 | -178.28 | 8 | 7 |
Triple sheared with non-canonical cWW |
| 223 |
Motif group IL_85630.1
Basepair signature:
|
0.00 | -179.08 | 10 | 7 |
|
| 224 |
Motif group IL_38969.1
Basepair signature:
|
0.00 | -181.33 | 10 | 8 |
Reverse kink-turn related |
| 225 |
Motif group IL_13358.1
Basepair signature:
|
0.00 | -184.62 | 10 | 9 |
|
| 226 |
Motif group IL_95811.1
Basepair signature:
|
0.00 | -186.35 | 8 | 6 |
Vitamin B12 Aptamer |
| 227 |
Motif group IL_74184.1
Basepair signature:
|
0.00 | -187.14 | 9 | 7 |
|
| 228 |
Motif group IL_58126.1
Basepair signature:
|
0.00 | -188.62 | 9 | 7 |
|
| 229 |
Motif group IL_69271.3
Basepair signature:
|
0.00 | -189.35 | 9 | 8 |
|
| 230 |
Motif group IL_65594.1
Basepair signature:
|
0.00 | -190.90 | 9 | 7 |
8x7 Sarcin-Ricin; G-bulge |
| 231 |
Motif group IL_69543.3
Basepair signature:
|
0.00 | -192.35 | 8 | 6 |
|
| 232 |
Motif group IL_85498.1
Basepair signature:
|
0.00 | -193.10 | 9 | 8 |
|
| 233 |
Motif group IL_37752.1
Basepair signature:
|
0.00 | -194.04 | 10 | 8 |
|
| 234 |
Motif group IL_70923.9
Basepair signature:
|
0.00 | -194.34 | 6 | 5 |
Kink-turn |
| 235 |
Motif group IL_54896.1
Basepair signature:
|
0.00 | -195.10 | 9 | 8 |
|
| 236 |
Motif group IL_54177.4
Basepair signature:
|
0.00 | -196.87 | 11 | 8 |
|
| 237 |
Motif group IL_49867.1
Basepair signature:
|
0.00 | -197.33 | 11 | 9 |
|
| 238 |
Motif group IL_04346.10
Basepair signature:
|
0.00 | -198.22 | 8 | 7 |
8x7 Sarcin-Ricin; G-bulge |
| 239 |
Motif group IL_88974.1
Basepair signature:
|
0.00 | -200.32 | 9 | 8 |
|
| 240 |
Motif group IL_51265.3
Basepair signature:
|
0.00 | -201.12 | 5 | 4 |
Kink-turn from U4 |
| 241 |
Motif group IL_26685.1
Basepair signature:
|
0.00 | -203.60 | 6 | 4 |
Multiple bulged bases |
| 242 |
Motif group IL_80604.6
Basepair signature:
|
0.00 | -204.70 | 10 | 8 |
|
| 243 |
Motif group IL_58350.1
Basepair signature:
|
0.00 | -205.84 | 10 | 8 |
|
| 244 |
Motif group IL_22854.4
Basepair signature:
|
0.00 | -206.53 | 9 | 7 |
|
| 245 |
Motif group IL_89312.1
Basepair signature:
|
0.00 | -207.19 | 8 | 6 |
|
| 246 |
Motif group IL_65851.3
Basepair signature:
|
0.00 | -207.90 | 9 | 7 |
|
| 247 |
Motif group IL_64403.1
Basepair signature:
|
0.00 | -214.14 | 11 | 9 |
|
| 248 |
Motif group IL_70376.1
Basepair signature:
|
0.00 | -216.17 | 7 | 5 |
|
| 249 |
Motif group IL_04638.3
Basepair signature:
|
0.00 | -217.07 | 8 | 7 |
tSH-tHS-tHW |
| 250 |
Motif group IL_59724.1
Basepair signature:
|
0.00 | -217.56 | 10 | 7 |
8x7 Sarcin-Ricin with CC bifurcated pair; G-bulge |
| 251 |
Motif group IL_43858.1
Basepair signature:
|
0.00 | -218.07 | 11 | 9 |
|
| 252 |
Motif group IL_99380.1
Basepair signature:
|
0.00 | -218.18 | 7 | 6 |
|
| 253 |
Motif group IL_74746.1
Basepair signature:
|
0.00 | -222.73 | 10 | 9 |
|
| 254 |
Motif group IL_31915.1
Basepair signature:
|
0.00 | -222.99 | 12 | 9 |
|
| 255 |
Motif group IL_00881.1
Basepair signature:
|
0.00 | -223.36 | 5 | 3 |
|
| 256 |
Motif group IL_64900.1
Basepair signature:
|
0.00 | -225.94 | 9 | 7 |
Kink-turn |
| 257 |
Motif group IL_73355.1
Basepair signature:
|
0.00 | -226.53 | 6 | 3 |
|
| 258 |
Motif group IL_76709.2
Basepair signature:
|
0.00 | -227.02 | 5 | 3 |
|
| 259 |
Motif group IL_84694.2
Basepair signature:
|
0.00 | -227.05 | 11 | 9 |
tSH-tHW-tHH-tHS |
| 260 |
Motif group IL_79895.1
Basepair signature:
|
0.00 | -227.09 | 5 | 4 |
|
| 261 |
Motif group IL_13874.1
Basepair signature:
|
0.00 | -229.01 | 10 | 8 |
|
| 262 |
Motif group IL_80209.1
Basepair signature:
|
0.00 | -231.07 | 10 | 8 |
|
| 263 |
Motif group IL_56987.1
Basepair signature:
|
0.00 | -231.27 | 5 | 3 |
|
| 264 |
Motif group IL_73002.1
Basepair signature:
|
0.00 | -236.56 | 13 | 11 |
|
| 265 |
Motif group IL_25412.1
Basepair signature:
|
0.00 | -236.75 | 8 | 7 |
Major groove intercalation |
| 266 |
Motif group IL_55917.1
Basepair signature:
|
0.00 | -237.31 | 9 | 8 |
|
| 267 |
Motif group IL_60657.1
Basepair signature:
|
0.00 | -241.78 | 11 | 9 |
|
| 268 |
Motif group IL_54050.1
Basepair signature:
|
0.00 | -241.89 | 11 | 9 |
|
| 269 |
Motif group IL_92634.2
Basepair signature:
|
0.00 | -241.93 | 6 | 5 |
|
| 270 |
Motif group IL_42231.1
Basepair signature:
|
0.00 | -242.06 | 10 | 9 |
|
| 271 |
Motif group IL_87211.1
Basepair signature:
|
0.00 | -243.76 | 6 | 5 |
|
| 272 |
Motif group IL_42626.2
Basepair signature:
|
0.00 | -243.98 | 5 | 3 |
|
| 273 |
Motif group IL_07171.1
Basepair signature:
|
0.00 | -244.92 | 7 | 4 |
Bulged stacked bases |
| 274 |
Motif group IL_18472.4
Basepair signature:
|
0.00 | -245.77 | 8 | 4 |
|
| 275 |
Motif group IL_47087.1
Basepair signature:
|
0.00 | -246.08 | 8 | 6 |
Kink-turn related |
| 276 |
Motif group IL_22551.4
Basepair signature:
|
0.00 | -246.26 | 5 | 3 |
|
| 277 |
Motif group IL_95583.2
Basepair signature:
|
0.00 | -246.79 | 4 | 3 |
Minor groove platform, major groove intercalation |
| 278 |
Motif group IL_04307.1
Basepair signature:
|
0.00 | -248.01 | 11 | 10 |
|
| 279 |
Motif group IL_36516.3
Basepair signature:
|
0.00 | -248.23 | 5 | 2 |
|
| 280 |
Motif group IL_30730.1
Basepair signature:
|
0.00 | -250.29 | 9 | 8 |
|
| 281 |
Motif group IL_34470.3
Basepair signature:
|
0.00 | -253.17 | 11 | 9 |
9x8 Sarcin-Ricin with GA cWW pair; G-bulge |
| 282 |
Motif group IL_15107.1
Basepair signature:
|
0.00 | -253.95 | 13 | 12 |
|
| 283 |
Motif group IL_88017.1
Basepair signature:
|
0.00 | -254.88 | 8 | 6 |
|
| 284 |
Motif group IL_48076.6
Basepair signature:
|
0.00 | -257.47 | 4 | 3 |
Major groove platform |
| 285 |
Motif group IL_28304.1
Basepair signature:
|
0.00 | -258.08 | 12 | 10 |
|
| 286 |
Motif group IL_46086.1
Basepair signature:
|
0.00 | -258.50 | 8 | 6 |
|
| 287 |
Motif group IL_19048.1
Basepair signature:
|
0.00 | -258.68 | 10 | 8 |
|
| 288 |
Motif group IL_28026.3
Basepair signature:
|
0.00 | -258.87 | 9 | 7 |
|
| 289 |
Motif group IL_43467.1
Basepair signature:
|
0.00 | -259.25 | 14 | 11 |
Pseudoknot |
| 290 |
Motif group IL_43547.1
Basepair signature:
|
0.00 | -259.76 | 11 | 10 |
10x8 Sarcin-Ricin; G-bulge |
| 291 |
Motif group IL_36729.1
Basepair signature:
|
0.00 | -260.31 | 11 | 9 |
|
| 292 |
Motif group IL_59049.1
Basepair signature:
|
0.00 | -260.37 | 12 | 10 |
|
| 293 |
Motif group IL_27393.10
Basepair signature:
|
0.00 | -260.64 | 9 | 7 |
|
| 294 |
Motif group IL_53596.1
Basepair signature:
|
0.00 | -260.72 | 10 | 7 |
|
| 295 |
Motif group IL_21173.1
Basepair signature:
|
0.00 | -260.94 | 10 | 7 |
|
| 296 |
Motif group IL_05472.1
Basepair signature:
|
0.00 | -264.00 | 12 | 10 |
|
| 297 |
Motif group IL_51454.3
Basepair signature:
|
0.00 | -264.05 | 4 | 3 |
Minor groove platform |
| 298 |
Motif group IL_20031.1
Basepair signature:
|
0.00 | -264.42 | 6 | 4 |
|
| 299 |
Motif group IL_81392.1
Basepair signature:
|
0.00 | -264.58 | 15 | 14 |
|
| 300 |
Motif group IL_21630.1
Basepair signature:
|
0.00 | -264.91 | 11 | 9 |
|
| 301 |
Motif group IL_87290.1
Basepair signature:
|
0.00 | -265.65 | 14 | 13 |
Kink-turn related |
| 302 |
Motif group IL_14368.1
Basepair signature:
|
0.00 | -269.25 | 6 | 3 |
Major groove platform with intercalated tWH |
| 303 |
Motif group IL_84665.1
Basepair signature:
|
0.00 | -269.51 | 11 | 9 |
|
| 304 |
Motif group IL_95727.1
Basepair signature:
|
0.00 | -271.53 | 10 | 7 |
Kink-turn |
| 305 |
Motif group IL_89047.1
Basepair signature:
|
0.00 | -272.17 | 11 | 10 |
|
| 306 |
Motif group IL_47074.2
Basepair signature:
|
0.00 | -273.44 | 5 | 4 |
|
| 307 |
Motif group IL_10569.1
Basepair signature:
|
0.00 | -273.63 | 5 | 3 |
|
| 308 |
Motif group IL_52743.1
Basepair signature:
|
0.00 | -274.92 | 8 | 5 |
|
| 309 |
Motif group IL_33711.1
Basepair signature:
|
0.00 | -275.34 | 9 | 8 |
Minor groove platform |
| 310 |
Motif group IL_81731.1
Basepair signature:
|
0.00 | -275.64 | 12 | 9 |
|
| 311 |
Motif group IL_46112.1
Basepair signature:
|
0.00 | -276.02 | 10 | 8 |
|
| 312 |
Motif group IL_88072.1
Basepair signature:
|
0.00 | -276.79 | 10 | 8 |
|
| 313 |
Motif group IL_02555.1
Basepair signature:
|
0.00 | -277.20 | 5 | 3 |
Major groove platform with intercalation |
| 314 |
Motif group IL_04073.1
Basepair signature:
|
0.00 | -277.90 | 14 | 12 |
|
| 315 |
Motif group IL_91698.1
Basepair signature:
|
0.00 | -278.09 | 11 | 10 |
|
| 316 |
Motif group IL_82968.1
Basepair signature:
|
0.00 | -279.55 | 9 | 7 |
|
| 317 |
Motif group IL_94967.1
Basepair signature:
|
0.00 | -281.12 | 7 | 5 |
|
| 318 |
Motif group IL_15052.4
Basepair signature:
|
0.00 | -284.20 | 4 | 3 |
Minor groove platform |
| 319 |
Motif group IL_57741.1
Basepair signature:
|
0.00 | -284.22 | 11 | 10 |
|
| 320 |
Motif group IL_26598.1
Basepair signature:
|
0.00 | -285.58 | 9 | 6 |
|
| 321 |
Motif group IL_61249.1
Basepair signature:
|
0.00 | -289.37 | 13 | 12 |
|
| 322 |
Motif group IL_68140.4
Basepair signature:
|
0.00 | -289.42 | 5 | 3 |
Major groove minor groove platform; mini C-loop |
| 323 |
Motif group IL_50694.7
Basepair signature:
|
0.00 | -291.47 | 4 | 3 |
Major groove platform; stack outside cWW |
| 324 |
Motif group IL_29346.2
Basepair signature:
|
0.00 | -294.09 | 6 | 4 |
Left turn |
| 325 |
Motif group IL_04650.2
Basepair signature:
|
0.00 | -294.24 | 11 | 9 |
|
| 326 |
Motif group IL_47078.3
Basepair signature:
|
0.00 | -294.32 | 6 | 4 |
Minor groove platform |
| 327 |
Motif group IL_70670.1
Basepair signature:
|
0.00 | -296.10 | 12 | 10 |
9x9 Sarcin-Ricin with pseudoknotted region; G-bulge |
| 328 |
Motif group IL_67623.1
Basepair signature:
|
0.00 | -296.24 | 9 | 7 |
Minor groove platform related |
| 329 |
Motif group IL_29357.1
Basepair signature:
|
0.00 | -296.56 | 13 | 12 |
|
| 330 |
Motif group IL_42032.1
Basepair signature:
|
0.00 | -296.57 | 7 | 5 |
|
| 331 |
Motif group IL_56455.6
Basepair signature:
|
0.00 | -299.39 | 11 | 10 |
Bacterial 5S Loop E |
| 332 |
Motif group IL_63775.1
Basepair signature:
|
0.00 | -301.06 | 6 | 4 |
|
| 333 |
Motif group IL_17973.1
Basepair signature:
|
0.00 | -301.66 | 16 | 14 |
|
| 334 |
Motif group IL_85879.1
Basepair signature:
|
0.00 | -304.83 | 12 | 10 |
|
| 335 |
Motif group IL_38186.6
Basepair signature:
|
0.00 | -311.10 | 7 | 5 |
|
| 336 |
Motif group IL_06029.1
Basepair signature:
|
0.00 | -311.58 | 17 | 14 |
Kink-turn |
| 337 |
Motif group IL_97273.1
Basepair signature:
|
0.00 | -312.11 | 7 | 4 |
|
| 338 |
Motif group IL_31462.6
Basepair signature:
|
0.00 | -314.59 | 3 | 3 |
Single bulged A |
| 339 |
Motif group IL_33323.1
Basepair signature:
|
0.00 | -315.51 | 6 | 3 |
|
| 340 |
Motif group IL_99692.2
Basepair signature:
|
0.00 | -320.14 | 8 | 7 |
Kink-turn |
| 341 |
Motif group IL_93889.1
Basepair signature:
|
0.00 | -325.08 | 14 | 13 |
|
| 342 |
Motif group IL_94910.1
Basepair signature:
|
0.00 | -328.28 | 8 | 6 |
Kink-turn |
| 343 |
Motif group IL_18354.1
Basepair signature:
|
0.00 | -330.24 | 10 | 8 |
|
| 344 |
Motif group IL_19516.1
Basepair signature:
|
0.00 | -330.61 | 14 | 11 |
Pseudoknot |
| 345 |
Motif group IL_15218.1
Basepair signature:
|
0.00 | -332.65 | 11 | 9 |
|
| 346 |
Motif group IL_77045.1
Basepair signature:
|
0.00 | -335.74 | 8 | 6 |
Kink-turn |
| 347 |
Motif group IL_73700.1
Basepair signature:
|
0.00 | -337.24 | 11 | 9 |
|
| 348 |
Motif group IL_60448.1
Basepair signature:
|
0.00 | -338.21 | 14 | 13 |
|
| 349 |
Motif group IL_06691.1
Basepair signature:
|
0.00 | -338.53 | 8 | 5 |
|
| 350 |
Motif group IL_01488.3
Basepair signature:
|
0.00 | -351.86 | 7 | 5 |
Kink-turn |
| 351 |
Motif group IL_04332.3
Basepair signature:
|
0.00 | -356.36 | 11 | 10 |
|
| 352 |
Motif group IL_89505.4
Basepair signature:
|
0.00 | -356.44 | 4 | 4 |
Single bulged U |
| 353 |
Motif group IL_53787.1
Basepair signature:
|
0.00 | -357.90 | 13 | 11 |
Pseudoknot |
| 354 |
Motif group IL_20463.1
Basepair signature:
|
0.00 | -362.14 | 12 | 10 |
7x11 Sarcin-Ricin with pseudoknotted region; G-bulge |
| 355 |
Motif group IL_66663.1
Basepair signature:
|
0.00 | -363.16 | 12 | 11 |
|
| 356 |
Motif group IL_03350.1
Basepair signature:
|
0.00 | -370.11 | 9 | 7 |
Reverse kink-turn related |
| 357 |
Motif group IL_50715.3
Basepair signature:
|
0.00 | -375.70 | 16 | 15 |
|
| 358 |
Motif group IL_13394.1
Basepair signature:
|
0.00 | -379.66 | 17 | 16 |
|
| 359 |
Motif group IL_76460.1
Basepair signature:
|
0.00 | -380.06 | 16 | 15 |
|
| 360 |
Motif group IL_17069.5
Basepair signature:
|
0.00 | -380.61 | 9 | 8 |
Kink-turn related |
| 361 |
Motif group IL_60797.1
Basepair signature:
|
0.00 | -384.27 | 14 | 12 |
|
| 362 |
Motif group IL_65653.1
Basepair signature:
|
0.00 | -386.27 | 12 | 10 |
|
| 363 |
Motif group IL_82426.6
Basepair signature:
|
0.00 | -390.64 | 12 | 10 |
|
| 364 |
Motif group IL_30441.1
Basepair signature:
|
0.00 | -391.59 | 13 | 11 |
|
| 365 |
Motif group IL_37015.1
Basepair signature:
|
0.00 | -394.04 | 9 | 7 |
Kink-turn |
| 366 |
Motif group IL_42218.2
Basepair signature:
|
0.00 | -397.31 | 11 | 9 |
|
| 367 |
Motif group IL_96303.1
Basepair signature:
|
0.00 | -397.96 | 13 | 11 |
|
| 368 |
Motif group IL_01994.1
Basepair signature:
|
0.00 | -408.05 | 6 | 4 |
|
| 369 |
Motif group IL_22373.1
Basepair signature:
|
0.00 | -408.88 | 7 | 4 |
8-nt loop receptor |
| 370 |
Motif group IL_58103.11
Basepair signature:
|
0.00 | -411.38 | 7 | 4 |
Symmetric double minor groove platform |
| 371 |
Motif group IL_15991.1
Basepair signature:
|
0.00 | -434.68 | 17 | 16 |
|
| 372 |
Motif group IL_79846.1
Basepair signature:
|
0.00 | -450.56 | 15 | 13 |
|
| 373 |
Motif group IL_53581.1
Basepair signature:
|
0.00 | -465.92 | 17 | 15 |
Kink-turn related |
| 374 |
Motif group IL_31504.1
Basepair signature:
|
0.00 | -470.76 | 15 | 13 |
|
| 375 |
Motif group IL_80298.1
Basepair signature:
|
0.00 | -478.69 | 21 | 19 |
|
| 376 |
Motif group IL_64858.3
Basepair signature:
|
0.00 | -482.05 | 18 | 17 |
|
| 377 |
Motif group IL_61299.4
Basepair signature:
|
0.00 | -501.49 | 6 | 4 |
|
| 378 |
Motif group IL_34739.3
Basepair signature:
|
0.00 | -502.21 | 20 | 19 |
|
| 379 |
Motif group IL_29826.1
Basepair signature:
|
0.00 | -502.76 | 20 | 20 |
|
| 380 |
Motif group IL_83149.1
Basepair signature:
|
0.00 | -525.35 | 22 | 20 |
|
| 381 |
Motif group IL_41203.4
Basepair signature:
|
0.00 | -583.34 | 7 | 6 |
SSU/LSU pseudoknot |
| 382 |
Motif group IL_00555.1
Basepair signature:
|
0.00 | -667.79 | 8 | 5 |
|
| 383 |
Motif group IL_19897.3
Basepair signature:
|
0.00 | -740.86 | 9 | 7 |
|
| 384 |
Motif group IL_64048.1
Basepair signature:
|
0.00 | -748.36 | 10 | 8 |
|
| 385 |
Motif group IL_32056.1
Basepair signature:
|
0.00 | -790.30 | 10 | 9 |
|
| 386 |
Motif group IL_07469.2
Basepair signature:
|
0.00 | -803.76 | 6 | 4 |
|
| 387 |
Motif group IL_94684.1
Basepair signature:
|
0.00 | -846.14 | 7 | 4 |
|
| 388 |
Motif group IL_25573.1
Basepair signature:
|
0.00 | -850.70 | 7 | 4 |
|
| 389 |
Motif group IL_58960.1
Basepair signature:
|
0.00 | -881.46 | 8 | 7 |
|
| 390 |
Motif group IL_86012.1
Basepair signature:
|
0.00 | -1687.34 | 10 | 9 |
|
| 391 |
Motif group IL_46174.3
Basepair signature:
|
0.00 | -1738.47 | 8 | 6 |
Kink-turn with non-sequential stacking |
| 392 |
Motif group IL_75283.2
Basepair signature:
|
0.00 | -1766.07 | 13 | 11 |
|
| 393 |
Motif group IL_84409.1
Basepair signature:
|
0.00 | -1803.76 | 18 | 17 |
|
| 394 |
Motif group IL_49971.1
Basepair signature:
|
0.00 | -1846.97 | 9 | 7 |
|
| 395 |
Motif group IL_43140.1
Basepair signature:
|
0.00 | -1850.55 | 11 | 9 |
|
| 396 |
Motif group IL_19852.1
Basepair signature:
|
0.00 | -1897.00 | 11 | 10 |
Part of G-quadruplex |
| 397 |
Motif group IL_17765.1
Basepair signature:
|
0.00 | -1912.95 | 10 | 8 |
|
| 398 |
Motif group IL_44624.1
Basepair signature:
|
0.00 | -1919.79 | 10 | 8 |
|
| 399 |
Motif group IL_81516.2
Basepair signature:
|
0.00 | -1998.36 | 13 | 11 |
|
| 400 |
Motif group IL_24134.1
Basepair signature:
|
0.00 | -2404.55 | 7 | 5 |
Kink-turn |
| 401 |
Motif group IL_49714.1
Basepair signature:
|
0.00 | -2461.33 | 8 | 6 |
Major groove intercalation |
| 402 |
Motif group IL_38394.1
Basepair signature:
|
0.00 | -2515.09 | 8 | 6 |
|
| 403 |
Motif group IL_26222.2
Basepair signature:
|
0.00 | -5200.26 | 7 | 3 |
C-loop with bulged stacked A's |
| 404 |
Motif group IL_22564.1
Basepair signature:
|
0.00 | -6031.22 | 9 | 6 |
|
| 405 |
Motif group IL_63596.11
Basepair signature:
|
0.00 | -6353.67 | 5 | 3 |
C-loop |
| 406 |
Motif group IL_83150.2
Basepair signature:
|
0.00 | -7837.52 | 5 | 3 |
|
| 407 |
Motif group IL_59877.1
Basepair signature:
|
0.00 | -9141.86 | 5 | 4 |
|
| 408 |
Motif group IL_54737.1
Basepair signature:
|
0.00 | -9999.00 | 20 | 20 |
|
| 409 |
Motif group IL_45896.1
Basepair signature:
|
0.00 | -9999.00 | 15 | 15 |
|
| 410 |
Motif group IL_20245.1
Basepair signature:
|
0.00 | -9999.00 | 20 | 18 |
|
| 411 |
Motif group IL_03109.3
Basepair signature:
|
0.00 | -9999.00 | 5 | 3 |
C-loop |