#Varna 2DMotifNum NtsInstances
1
  • IL_48459.2
IL_48459.2
  • Basepair signature: cWW-cWW-cWW
  • History status: Updated, 1 parent
  • Isolated non-canonical cWW with bulges (13)
  • Isolated cWH basepair (11)
  • UU cWW (10)
  • CA cWW (6)
  • CC cWW (4)
  • Intercalated tWH (3)
  • Self complementary (2)
  • AA cWW (2)
  • Isolated near basepair (2)
  • Multiple bulged bases, near cWW (1)
  • Isolated cWS basepair (1)
  • Single bulged G, near cWW (1)
  • GU cWW (1)
  • UU cWW water inserted (1)
  • Decoding loop related (1)
  • UG cWW (1)
  • CA cWW with bulged A (1)
  • GA cWW (1)
  • UC cWW (1)
  • 6305
    2
    • IL_20868.1
    IL_20868.1
    • Basepair signature: cWW-cWW
    • History status: New id, 1 parent
  • Single bulged A (82)
  • Multiple bulged bases (4)
  • Basepair outside cWW (3)
  • Major groove platform outside cWW (2)
  • Stack outside cWW (2)
  • Intercalation pocket (1)
  • Major groove platform (1)
  • 4117
    3
    • IL_83039.1
    IL_83039.1
    • Basepair signature: cWW-cWW
    • History status: New id, > 2 parents
  • Single bulged U (64)
  • Multiple bulged bases (4)
  • 489
    4
    • IL_60247.2
    IL_60247.2
    • Basepair signature: cWW-cWW-cWW-cWW
    • History status: Updated, 1 parent
  • Tandem non-canonical cWW pairs (65)
  • Non canonical cWW and near pair (1)
  • Minor groove platform related (1)
  • 868
    5
    • IL_80663.2
    IL_80663.2
    • Basepair signature: cWW-tHS-cSH-cWW
    • History status: Updated, 1 parent
  • Major groove platform (27)
  • Major groove platform; stack outside cWW (9)
  • Major groove intercalation (1)
  • 556
    6
    • IL_11156.2
    IL_11156.2
    • Basepair signature: cWW-R-cWW
    • History status: Updated, 1 parent
  • Single stack bend (19)
  • Decoding loop related (11)
  • Stack and bulge (2)
  • Not an internal loop (1)
  • Intercalated cWW (1)
  • 551
    7
    • IL_06437.2
    IL_06437.2
    • Basepair signature: cWW-tSH-cWW
    • History status: Updated, 1 parent
  • Minor groove platform (47)
  • Major groove outside cWW, minor groove, intercalation pocket (1)
  • Single bulged A (1)
  • 549
    8
    • IL_13730.1
    IL_13730.1
    • Basepair signature: cWW-cWW
    • History status: New id, > 2 parents
  • Multiple bulged bases (26)
  • Major groove outside cWW, minor groove, intercalation pocket (6)
  • 442
    9
    • IL_12786.1
    IL_12786.1
    • Basepair signature: cWW-cWH-cWW
    • History status: Exact match
  • Isolated cWH basepair (30)
  • Self complementary (2)
  • Isolated near basepair (2)
  • Isolated non-canonical cWW with bulges (1)
  • Other IL (1)
  • cWH basepair with bulged bases (1)
  • 640
    10
    • IL_56467.2
    IL_56467.2
    • Basepair signature: cWW-tSH-tHS-tHS-cWW
    • History status: Updated, 1 parent
  • Triple sheared (33)
  • AAA cross-strand stack (5)
  • 1038
    11
    • IL_61258.1
    IL_61258.1
    • Basepair signature: cWW-cWW
    • History status: New id, > 2 parents
  • Single bulged C (29)
  • SSU/LSU pseudoknot (1)
  • 436
    12
    • IL_29549.2
    IL_29549.2
    • Basepair signature: cWW-tSS-L-tSH-tHS-tHS-cWW
    • History status: Updated, 2 parents
  • Kink-turn (32)
  • Kink-turn with non-sequential stacking (4)
  • 1236
    13
    • IL_92039.1
    IL_92039.1
    • Basepair signature: cWW-cWW
    • History status: New id, > 2 parents
  • Single bulged G (30)
  • Single bulged A (1)
  • 435
    14
    • IL_09705.2
    IL_09705.2
    • Basepair signature: cWW-tSH-tHS-cWW
    • History status: Updated, 1 parent
  • Double sheared (29)
  • Other IL (2)
  • tWS-tSW (1)
  • 832
    15
    • IL_75892.1
    IL_75892.1
    • Basepair signature: cWW-tWH-cSH-L-cWS-cWW
    • History status: New id, 2 parents
  • C-loop (22)
  • 723
    16
    • IL_53523.2
    IL_53523.2
    • Basepair signature: cWW-tWH-L-tHS-cWW
    • History status: Updated, 1 parent
  • UAA/GAN (22)
  • UAA/GAN related (1)
  • 923
    17
    • IL_00168.2
    IL_00168.2
    • Basepair signature: cWW-cSW-cWW
    • History status: Updated, 2 parents
  • Major groove minor groove platform; mini C-loop (12)
  • Major groove outside cWW, minor groove, intercalation pocket (3)
  • 620
    18
    • IL_95485.2
    IL_95485.2
    • Basepair signature: cWW-cSH-cWW-cWW
    • History status: Updated, 1 parent
  • Major groove platform with extra cWW (8)
  • Isolated basepair with bulged bases (1)
  • 718
    19
    • IL_70995.1
    IL_70995.1
    • Basepair signature: cWW-tSH-L-cWW
    • History status: Exact match
  • Major groove platform; stack outside cWW (11)
  • 617
    20
    • IL_04346.2
    IL_04346.2
    • Basepair signature: cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW
    • History status: Updated, 1 parent
  • 8x7 Sarcin-Ricin; G-bulge (17)
  • 1517
    21
    • IL_39521.1
    IL_39521.1
    • Basepair signature: cWW-tSH-tWH-tHS-cWW
    • History status: Exact match
  • tSH-tHW-tHS (15)
  • 5x5 Sarcin-Ricin with intercalated A; G-bulge (1)
  • 1016
    22
    • IL_35110.2
    IL_35110.2
    • Basepair signature: cWW-tSH-tHH-cSH-tWH-tHS-cWW
    • History status: Updated, 1 parent
  • 7x6 Sarcin-Ricin; G-bulge (10)
  • Sarcin-Ricin target in LSU H95; G-bulge (5)
  • 1315
    23
    • IL_10277.2
    IL_10277.2
    • Basepair signature: cWW-L-cWW
    • History status: Updated, 1 parent
  • Major groove outside cWW, minor groove, intercalation pocket (2)
  • Minor groove platform (2)
  • Not an internal loop (2)
  • Single stack bend (1)
  • 515
    24
    • IL_87630.1
    IL_87630.1
    • Basepair signature: cWW-tSH-cSH-cWW
    • History status: New id, 1 parent
  • Major groove platform with extra pair (10)
  • Other IL (1)
  • 715
    25
    • IL_81326.1
    IL_81326.1
    • Basepair signature: cWW-L-cWW-cWW
    • History status: Exact match
  • Decoding loop related (2)
  • 714
    26
    • IL_38958.2
    IL_38958.2
    • Basepair signature: cWW-tHS-cWW
    • History status: Updated, 1 parent
  • Isolated tHS basepair with bulges (13)
  • 613
    27
    • IL_67621.2
    IL_67621.2
    • Basepair signature: cWW-cWS-cWW
    • History status: Updated, 1 parent
  • Isolated cWS basepair (8)
  • Isolated near basepair (2)
  • 613
    28
    • IL_37811.1
    IL_37811.1
    • Basepair signature: cWW-R-tSH-tHS-cWW
    • History status: Exact match
  • UAA/GAN variation (7)
  • UAA/GAN related (5)
  • 912
    29
    • IL_50676.1
    IL_50676.1
    • Basepair signature: cWW-L-R-cWW-cWW
    • History status: New id, 2 parents
  • Tandem non-canonical cWW pairs (4)
  • Pseudoknot (3)
  • Other IL (1)
  • 812
    30
    • IL_09818.2
    IL_09818.2
    • Basepair signature: cWW-tHS-cWW
    • History status: Updated, 2 parents
  • Minor groove platform with intercalation (5)
  • Minor groove platform (2)
  • Other IL (1)
  • 512
    31
    • IL_97601.2
    IL_97601.2
    • Basepair signature: cWW-tWH-cSH-cWW
    • History status: Updated, 1 parent
  • Receptor of 11-nt loop-receptor motif (8)
  • 8-nt loop receptor (2)
  • Other IL (1)
  • 811
    32
    • IL_35167.1
    IL_35167.1
    • Basepair signature: cWW-R-tWH-L-tHS-cWW
    • History status: Exact match
  • UAA/GAN (2)
  • tSH-tHS-tHW (1)
  • UAA/GAN with extra pair (1)
  • Other IL (1)
  • 1010
    33
    • IL_94431.1
    IL_94431.1
    • Basepair signature: cWW-cSH-cWS-cWW
    • History status: Exact match
  • Minor groove platform (9)
  • 610
    34
    • IL_31933.2
    IL_31933.2
    • Basepair signature: cWW-tWW-cWW
    • History status: Updated, 1 parent
  • Isolated tWW turn (4)
  • Decoding loop with one bulged A (1)
  • 610
    35
    • IL_49607.2
    IL_49607.2
    • Basepair signature: cWW-tWH-tHS-cWW
    • History status: Updated, 1 parent
  • tSH-tHW (5)
  • Other IL (1)
  • 89
    36
    • IL_34153.1
    IL_34153.1
    • Basepair signature: cWW-cWW
    • History status: New id, > 2 parents
  • Major groove intercalation (4)
  • Single bulged A (2)
  • 49
    37
    • IL_15861.2
    IL_15861.2
    • Basepair signature: cWW-L-L-L-cSH-L-cWW
    • History status: Updated, 1 parent
  • SSU/LSU pseudoknot (6)
  • 109
    38
    • IL_91481.1
    IL_91481.1
    • Basepair signature: cWW-R-R-tHS-cWW
    • History status: New id, > 2 parents
  • Major groove minor groove platform with extra cWW (3)
  • Isolated basepair with bulged bases (1)
  • Minor groove platform with extra cWW (1)
  • 89
    39
    • IL_81328.1
    IL_81328.1
    • Basepair signature: cWW-R-cWW
    • History status: New id, 2 parents
  • Basepair outside cWW, intercalation pocket (5)
  • Major groove outside cWW, intercalation pocket (1)
  • Single stack bend (1)
  • 58
    40
    • IL_19389.1
    IL_19389.1
    • Basepair signature: cWW-L-cSH-cWW
    • History status: New id, 1 parent
  • Major groove platform with intercalated tWH (5)
  • Left turn (2)
  • 68
    41
    • IL_40979.1
    IL_40979.1
    • Basepair signature: cWW-cWW-tWW-cWW
    • History status: Exact match
  • tWW and non-canonical cWW (6)
  • Tandem non-canonical cWW pairs (2)
  • 88
    42
    • IL_66414.2
    IL_66414.2
    • Basepair signature: cWW-cWW-tSH-tHS-tHS-L-R-cWW
    • History status: Updated, 1 parent
  • Triple sheared with non-canonical cWW (4)
  • 148
    43
    • IL_66584.2
    IL_66584.2
    • Basepair signature: cWW-tSH-tSH-tHH-tHS-cWW
    • History status: Updated, 1 parent
  • tSH-tSH-tHH-tHS (3)
  • Quadruple sheared (2)
  • 128
    44
    • IL_15944.2
    IL_15944.2
    • Basepair signature: cWW-cWW-cWW
    • History status: Updated, 1 parent
  • Isolated non-canonical cWW with bulges (2)
  • Intercalated tWH (1)
  • 68
    45
    • IL_48233.1
    IL_48233.1
    • Basepair signature: cWW-tSH-tSH-tHS-cWW-cWW
    • History status: New id, 2 parents
  • Tandem non-canonical cWW pairs with near WC pairs (1)
  • 128
    46
    • IL_36612.1
    IL_36612.1
    • Basepair signature: cWW-cWW
    • History status: New id, 1 parent
  • Single bulged U (4)
  • 48
    47
    • IL_81442.2
    IL_81442.2
    • Basepair signature: cWW-L-cWW
    • History status: Updated, 1 parent
  • Intercalated cWS (2)
  • Other IL (1)
  • Single base bend (1)
  • 57
    48
    • IL_17470.2
    IL_17470.2
    • Basepair signature: cWW-R-tHW-tHW-tWW-cWW
    • History status: Updated, 1 parent
  • tHW-tHW cross-strand stack (6)
  • 117
    49
    • IL_90991.2
    IL_90991.2
    • Basepair signature: cWW-cWW
    • History status: Updated, 1 parent
  • Multiple bulged bases (4)
  • 47
    50
    • IL_58103.2
    IL_58103.2
    • Basepair signature: cWW-cSH-L-cWS-tSW-R-R-cWW
    • History status: Updated, 1 parent
  • Symmetric double minor groove platform (5)
  • 107
    51
    • IL_14148.2
    IL_14148.2
    • Basepair signature: cWW-cWW-tSH-cWW
    • History status: Updated, 2 parents
  • Minor groove platform with extra cWW (4)
  • 76
    52
    • IL_51265.1
    IL_51265.1
    • Basepair signature: cWW-tSS-L-tSH-tHS-cWW
    • History status: Exact match
  • Kink-turn from U4 (5)
  • Kink-turn from T-box riboswitch (1)
  • 106
    53
    • IL_29978.1
    IL_29978.1
    • Basepair signature: cWW-L-L-L-tHS-cWW
    • History status: Exact match
    96
    54
    • IL_60992.2
    IL_60992.2
    • Basepair signature: cWW-tSS-tHH-cSW-bif-tSH-tWH-R-R-tHS-cWW
    • History status: Updated, 1 parent
    166
    55
    • IL_47154.1
    IL_47154.1
    • Basepair signature: cWW-cSW-L-R-cWW
    • History status: Exact match
    86
    56
    • IL_49767.1
    IL_49767.1
    • Basepair signature: cWW-cWW-R-tWH-L-tHS-cWW
    • History status: Exact match
  • UAA/GAN with extra cWW (3)
  • 126
    57
    • IL_56455.1
    IL_56455.1
    • Basepair signature: cWW-tSH-tHW-bif-L-R-bif-tWH-tHS-cWW
    • History status: Exact match
  • Bacterial 5S Loop E (6)
  • 186
    58
    • IL_34915.1
    IL_34915.1
    • Basepair signature: cWW-R-tWH-cSH-cWW
    • History status: Exact match
  • Receptor of 11-nt loop-receptor motif (6)
  • 96
    59
    • IL_16188.2
    IL_16188.2
    • Basepair signature: cWW-R-cWW
    • History status: Updated, 2 parents
  • Single bulged A (1)
  • 55
    60
    • IL_81225.1
    IL_81225.1
    • Basepair signature: cWW-cWW-cWW
    • History status: New id, 2 parents
    65
    61
    • IL_23544.1
    IL_23544.1
    • Basepair signature: cWW-L-R-R-cWW
    • History status: Exact match
    75
    62
    • IL_55953.1
    IL_55953.1
    • Basepair signature: cWW-tSH-R-tHS-L-bif-cWW
    • History status: Exact match
    125
    63
    • IL_17069.1
    IL_17069.1
    • Basepair signature: cWW-cSS-tSS-tHH-tWW-tHH-tHS-cWW
    • History status: Exact match
  • Kink-turn related (3)
  • 135
    64
    • IL_80443.1
    IL_80443.1
    • Basepair signature: cWW-cWW-cWW-cWW-cWW
    • History status: New id, 1 parent
    105
    65
    • IL_50587.2
    IL_50587.2
    • Basepair signature: cWW-tSH-tWH-tHW-tHS-cWW-cWW
    • History status: Updated, 1 parent
  • tSH-tHW-tHS-cWW (3)
  • 125
    66
    • IL_18776.1
    IL_18776.1
    • Basepair signature: cWW-cWW-cSW-cWW-cWW
    • History status: Exact match
  • Minor groove platform related (1)
  • 95
    67
    • IL_83162.1
    IL_83162.1
    • Basepair signature: cWW-tSH-L-R-L-tHH-cWW
    • History status: Exact match
    115
    68
    • IL_57188.1
    IL_57188.1
    • Basepair signature: cWW-tWW-cSH-L-tWW-cSH-cWW
    • History status: Exact match
    115
    69
    • IL_81168.2
    IL_81168.2
    • Basepair signature: cWW-cSH-R-cWW-cWW
    • History status: Updated, 2 parents
  • Other IL (1)
  • 85
    70
    • IL_94518.1
    IL_94518.1
    • Basepair signature: cWW-L-R-cWW-L-R-cWW-cWW
    • History status: Exact match
  • Other IL (1)
  • 125
    71
    • IL_97697.1
    IL_97697.1
    • Basepair signature: cWW-L-R-L-L-L-L-bif-cWW
    • History status: Exact match
  • Reverse turn (4)
  • 124
    72
    • IL_60695.1
    IL_60695.1
    • Basepair signature: cWW-L-R-R-R-cWW
    • History status: Exact match
    84
    73
    • IL_58790.1
    IL_58790.1
    • Basepair signature: cWW-cWW
    • History status: New id, > 2 parents
    44
    74
    • IL_79393.2
    IL_79393.2
    • Basepair signature: cWW-L-L-L-tHS-cWW-cWW
    • History status: Updated, 1 parent
    114
    75
    • IL_07527.1
    IL_07527.1
    • Basepair signature: cWW-L-R-R-cWW-cWW
    • History status: New id, 2 parents
  • Multiple bulged bases with near cWW (1)
  • 94
    76
    • IL_45944.2
    IL_45944.2
    • Basepair signature: cWW-L-L-tWH-L-L-L-cWW
    • History status: Updated, 1 parent
    114
    77
    • IL_23825.2
    IL_23825.2
    • Basepair signature: cWW-cSH-R-R-cWW
    • History status: Updated, 1 parent
    74
    78
    • IL_68506.1
    IL_68506.1
    • Basepair signature: cWW-cWW-tSH-R-tHW-tHW-tWH-L-R-cWW-cWW
    • History status: Exact match
    194
    79
    • IL_90538.2
    IL_90538.2
    • Basepair signature: cWW-tSS-L-tSH-tSS-tHS-L-R-L-cWW
    • History status: Updated, 1 parent
  • Kink-turn (4)
  • 134
    80
    • IL_08296.1
    IL_08296.1
    • Basepair signature: cWW-tSH-R-R-cWW
    • History status: Exact match
    84
    81
    • IL_38680.1
    IL_38680.1
    • Basepair signature: cWW-tSH-tHS-tHS-L-R-cWW
    • History status: Exact match
    124
    82
    • IL_08376.1
    IL_08376.1
    • Basepair signature: cWW-tWH-tSW-L-cWS-cWW
    • History status: Exact match
  • C-loop (4)
  • 74
    83
    • IL_52451.2
    IL_52451.2
    • Basepair signature: cWW-cWW-cWH-cWW
    • History status: Updated, 2 parents
    84
    84
    • IL_34626.1
    IL_34626.1
    • Basepair signature: cWW-L-R-L-cWW
    • History status: Exact match
    74
    85
    • IL_09732.1
    IL_09732.1
    • Basepair signature: cWW-cWW-R-cWW
    • History status: Exact match
    74
    86
    • IL_67474.2
    IL_67474.2
    • Basepair signature: cWW-R-R-cWW
    • History status: Updated, 1 parent
    64
    87
    • IL_88325.1
    IL_88325.1
    • Basepair signature: cWW-cHH-cWW
    • History status: New id, 2 parents
  • Major groove platform (2)
  • 54
    88
    • IL_44060.2
    IL_44060.2
    • Basepair signature: cWW-tSH-tSH-tHS-tSS-L-R-cWW
    • History status: Updated, 1 parent
  • Kink-turn (2)
  • Kink-turn from 23S H58 (1)
  • 123
    89
    • IL_75283.1
    IL_75283.1
    • Basepair signature: cWW-tSH-tSS-tSS-tWH-tWH-R-R-R-R-R-R-cWW
    • History status: Exact match
    183
    90
    • IL_49156.1
    IL_49156.1
    • Basepair signature: cWW-cWW
    • History status: New id, > 2 parents
  • Single bulged U (1)
  • 43
    91
    • IL_37794.1
    IL_37794.1
    • Basepair signature: cWW-cWW-L-R-R-L-cWW-cWW
    • History status: Exact match
    123
    92
    • IL_33662.2
    IL_33662.2
    • Basepair signature: cWW-L-tSS-cHW-L-L-L-L-L-cWW
    • History status: Updated, 1 parent
    133
    93
    • IL_58535.2
    IL_58535.2
    • Basepair signature: cWW-cWW-cWW
    • History status: Updated, 2 parents
    63
    94
    • IL_90106.2
    IL_90106.2
    • Basepair signature: cWW-tSH-tHH-cWW
    • History status: Updated, 2 parents
    83
    95
    • IL_75461.1
    IL_75461.1
    • Basepair signature: cWW-tSS-cSS-L-R-cWW
    • History status: Exact match
    63
    96
    • IL_68057.1
    IL_68057.1
    • Basepair signature: cWW-tSS-L-tSH-tHS-cWW-cWW
    • History status: New id, 1 parent
  • Kink-turn (3)
  • 123
    97
    • IL_10786.2
    IL_10786.2
    • Basepair signature: cWW-cWW
    • History status: Updated, 2 parents
  • Multiple bulged bases (1)
  • 43
    98
    • IL_58960.1
    IL_58960.1
    • Basepair signature: cWW-L-L-tWW-L-L-L-cWW
    • History status: Exact match
    113
    99
    • IL_38634.2
    IL_38634.2
    • Basepair signature: cWW-cWH-tWS-cWW
    • History status: Updated, 2 parents
  • cWH basepair and non-canonical AC (3)
  • 83
    100
    • IL_85881.1
    IL_85881.1
    • Basepair signature: cWW-R-cWW
    • History status: New id, > 2 parents
  • Multiple bulged bases (1)
  • 53
    101
    • IL_35422.1
    IL_35422.1
    • Basepair signature: cWW-cWW-cWW
    • History status: New id, 2 parents
  • Isolated non-canonical cWW with bulges (2)
  • 63
    102
    • IL_74051.1
    IL_74051.1
    • Basepair signature: cWW-tSS-L-tSH-tHS-L-cWW
    • History status: New id, 1 parent
  • Kink-turn (1)
  • 113
    103
    • IL_93830.2
    IL_93830.2
    • Basepair signature: cWW-cWW-bif-R-cSH-tWH-tHS-cWW
    • History status: Updated, 1 parent
  • 7x7 Sarcin-Ricin with intercalated A; G-bulge (3)
  • 143
    104
    • IL_41882.2
    IL_41882.2
    • Basepair signature: cWW-L-R-tHS-cWW-cWW
    • History status: Updated, 2 parents
    103
    105
    • IL_28060.2
    IL_28060.2
    • Basepair signature: cWW-tHH-L-cWS-R-cWW
    • History status: Updated, 1 parent
  • Major groove minor groove platform with tHH (2)
  • 83
    106
    • IL_35904.1
    IL_35904.1
    • Basepair signature: cWW-tSH-tSS-tSS-R-R-R-R-cWW
    • History status: Exact match
  • Kink-turn (3)
  • 123
    107
    • IL_82426.2
    IL_82426.2
    • Basepair signature: cWW-tSW-cWH-cHW-cWH-L-cHW-R-cWW
    • History status: Updated, 1 parent
    143
    108
    • IL_87284.1
    IL_87284.1
    • Basepair signature: cWW-tSH-tHW-tWH-tHS-cWW
    • History status: Exact match
  • tSH-tHW-tWH-tHS (3)
  • 123
    109
    • IL_96380.2
    IL_96380.2
    • Basepair signature: cWW-L-R-cWW
    • History status: Updated, 2 parents
    63
    110
    • IL_68780.1
    IL_68780.1
    • Basepair signature: cWW-tSH-tSH-tHS-tSS-R-cWW
    • History status: New id, 1 parent
  • Kink-turn (3)
  • 123
    111
    • IL_08966.1
    IL_08966.1
    • Basepair signature: cWW-L-R-cWW
    • History status: Exact match
  • CC cWW (1)
  • 63
    112
    • IL_18369.1
    IL_18369.1
    • Basepair signature: cWW-cSH-tHS-cWW
    • History status: Exact match
    83
    113
    • IL_36143.1
    IL_36143.1
    • Basepair signature: cWW-R-cWW
    • History status: Exact match
    53
    114
    • IL_66750.1
    IL_66750.1
    • Basepair signature: cWW-bif-cSH-L-cWW-cWW
    • History status: New id, 2 parents
  • Major groove minor groove platform with extra cWW (2)
  • 83
    115
    • IL_05062.2
    IL_05062.2
    • Basepair signature: cWW-L-R-tSH-L-R-L-cWW
    • History status: Updated, 1 parent
  • Triple sheared related (2)
  • Other IL (1)
  • 113
    116
    • IL_24606.1
    IL_24606.1
    • Basepair signature: cWW-tSH-tHH-cSH-tWH-tHS-L-cWW
    • History status: Exact match
  • 8x6 Sarcin-Ricin with inserted Y; G-bulge (3)
  • 143
    117
    • IL_22310.1
    IL_22310.1
    • Basepair signature: cWW-L-R-tSH-tHS-L-R-L-cWW
    • History status: Exact match
    133
    118
    • IL_48280.1
    IL_48280.1
    • Basepair signature: cWW-tSH-R-cWW
    • History status: Exact match
    73
    119
    • IL_54678.1
    IL_54678.1
    • Basepair signature: cWW-cWW
    • History status: Exact match
    43
    120
    • IL_64125.2
    IL_64125.2
    • Basepair signature: cWW-L-L-L-L-cWW
    • History status: Updated, 2 parents
    83
    121
    • IL_36973.2
    IL_36973.2
    • Basepair signature: cWW-tSH-L-R-R-R-L-L-cWW-cWW
    • History status: Updated, 1 parent
    143
    122
    • IL_74969.1
    IL_74969.1
    • Basepair signature: cWW-R-cWW
    • History status: Exact match
    53
    123
    • IL_78399.1
    IL_78399.1
    • Basepair signature: cWW-cWW-L-cWW-cWW-cWW
    • History status: Exact match
    113
    124
    • IL_25657.1
    IL_25657.1
    • Basepair signature: cWW-L-L-L-L-L-L-L-L-L-cWW
    • History status: New id, 2 parents
    132
    125
    • IL_50992.1
    IL_50992.1
    • Basepair signature: cWW-cWW-tSH-tHW-cSH-tHH-tHS-cWW-cWW
    • History status: Exact match
  • 9x8 Sarcin-Ricin; G-bulge (2)
  • 172
    126
    • IL_69670.1
    IL_69670.1
    • Basepair signature: cWW-R-R-cWW
    • History status: New id, 1 parent
    62
    127
    • IL_37650.1
    IL_37650.1
    • Basepair signature: cWW-cWW-cSW-cWW
    • History status: Exact match
  • Multiple bulged bases with non-canonical cWW (1)
  • Self complementary (1)
  • 82
    128
    • IL_46798.1
    IL_46798.1
    • Basepair signature: cWW-tHS-tHS-cWW
    • History status: New id, 2 parents
    82
    129
    • IL_55482.1
    IL_55482.1
    • Basepair signature: cWW-L-R-R-cWW
    • History status: New id, 1 parent
    72
    130
    • IL_64743.1
    IL_64743.1
    • Basepair signature: cWW-L-L-cWW
    • History status: New id, 2 parents
    62
    131
    • IL_83736.2
    IL_83736.2
    • Basepair signature: cWW-L-R-cSW-cSH-cWW
    • History status: Updated, 1 parent
    82
    132
    • IL_67703.1
    IL_67703.1
    • Basepair signature: cWW-tWW-L-tWH-R-R-R-R-cSH-R-R-L-tHH-tHS-cWW
    • History status: Exact match
    222
    133
    • IL_78834.1
    IL_78834.1
    • Basepair signature: cWW-tSH-L-R-L-L-cWW
    • History status: New id, 1 parent
    102
    134
    • IL_92440.1
    IL_92440.1
    • Basepair signature: cWW-cWW-tWH-tWH-tHW-tHW-cWW
    • History status: Exact match
  • tWH-tWH-tHW-tHW (2)
  • 142
    135
    • IL_39928.1
    IL_39928.1
    • Basepair signature: cWW-cWW
    • History status: New id, 1 parent
  • Single bulged A (2)
  • 42
    136
    • IL_78994.1
    IL_78994.1
    • Basepair signature: cWW-cSW-cWW-cWW
    • History status: Exact match
    82
    137
    • IL_26351.1
    IL_26351.1
    • Basepair signature: cWW-cWW-tSH-tWH-tHW-tHS-cWW-cWW
    • History status: Exact match
  • tSH-tHW-tHS with extra cWW pairs (1)
  • 142
    138
    • IL_45034.1
    IL_45034.1
    • Basepair signature: cWW-L-L-L-L-L-L-cWW
    • History status: Exact match
    102
    139
    • IL_95511.1
    IL_95511.1
    • Basepair signature: cWW-R-R-R-tSW-L-L-cWW
    • History status: Exact match
    112
    140
    • IL_02349.1
    IL_02349.1
    • Basepair signature: cWW-tSH-tWH-cSH-tWH-tHS-cWW
    • History status: Exact match
  • 8x6 Sarcin-Ricin with bulged A; G-bulge (2)
  • 132
    141
    • IL_23663.1
    IL_23663.1
    • Basepair signature: cWW-cSH-cWW-cWW
    • History status: Exact match
  • Isolated non-canonical cWW with bulges (1)
  • 72
    142
    • IL_27393.2
    IL_27393.2
    • Basepair signature: cWW-L-L-L-L-L-L-cWW
    • History status: Updated, 1 parent
    102
    143
    • IL_38440.1
    IL_38440.1
    • Basepair signature: cWW-cWW-cWW-cWW
    • History status: New id, 2 parents
  • Tandem non-canonical cWW pairs (2)
  • 82
    144
    • IL_65037.1
    IL_65037.1
    • Basepair signature: cWW-L-L-cWW
    • History status: New id, 1 parent
  • Single stack bend with bulge (1)
  • Other IL (1)
  • 62
    145
    • IL_15409.1
    IL_15409.1
    • Basepair signature: cWW-tHS-cWW
    • History status: New id, 2 parents
  • Minor groove platform (1)
  • 52
    146
    • IL_99373.1
    IL_99373.1
    • Basepair signature: cWW-bif-L-cWW
    • History status: Exact match
    72
    147
    • IL_51590.1
    IL_51590.1
    • Basepair signature: cWW-cSH-tWH-cSH-cWW-cWW
    • History status: Exact match
  • Other IL (1)
  • C-loop with extra cWW pair (1)
  • 92
    148
    • IL_81522.1
    IL_81522.1
    • Basepair signature: cWW-cSH-L-cWS-cWW
    • History status: Exact match
  • Major groove minor groove platform with intercalation; mini C-loop (2)
  • 72
    149
    • IL_47265.1
    IL_47265.1
    • Basepair signature: cWW-tSS-cSS-tWW-L-tSH-R-R-cWW
    • History status: Exact match
    112
    150
    • IL_31054.1
    IL_31054.1
    • Basepair signature: cWW-cSS-cSS-R-cWW
    • History status: New id, 2 parents
  • 180 degree turn (1)
  • 52
    151
    • IL_34470.1
    IL_34470.1
    • Basepair signature: cWW-cWW-L-R-tSH-tHH-cSH-tWH-tHS-cWW
    • History status: Exact match
  • 9x8 Sarcin-Ricin with GA cWW pair; G-bulge (2)
  • 172
    152
    • IL_50080.1
    IL_50080.1
    • Basepair signature: cWW-R-R-R-cWW
    • History status: New id, 1 parent
    72
    153
    • IL_68597.1
    IL_68597.1
    • Basepair signature: cWW-cWH-R-cWW-cWW
    • History status: New id, 2 parents
  • Isolated non-canonical cWW with bulges (1)
  • 72
    154
    • IL_90612.1
    IL_90612.1
    • Basepair signature: cWW-tWH-tWH-tWH-L-R-R-L-tWW-cWW
    • History status: Exact match
    142
    155
    • IL_61596.1
    IL_61596.1
    • Basepair signature: cWW-L-R-R-R-R-L-cWW
    • History status: Exact match
    102
    156
    • IL_76309.1
    IL_76309.1
    • Basepair signature: cWW-cWW
    • History status: New id, 2 parents
  • Single bulged G (1)
  • 42
    157
    • IL_42032.1
    IL_42032.1
    • Basepair signature: cWW-tWH-R-R-R-cSH-cWW-cWW
    • History status: Exact match
    112
    158
    • IL_80884.1
    IL_80884.1
    • Basepair signature: cWW-cWW-R-R-R-R-cWW
    • History status: Exact match
    102
    159
    • IL_67155.1
    IL_67155.1
    • Basepair signature: cWW-cWS-L-L-cWW
    • History status: New id, 1 parent
    82
    160
    • IL_88269.1
    IL_88269.1
    • Basepair signature: cWW-tSH-tHW-cSH-tWW-cWW
    • History status: Exact match
  • 6x5 Sarcin-Ricin; G-bulge (2)
  • 112
    161
    • IL_05690.1
    IL_05690.1
    • Basepair signature: cWW-tWH-L-R-tHS-bif-cWW
    • History status: Exact match
    122
    162
    • IL_16109.1
    IL_16109.1
    • Basepair signature: cWW-R-cSH-tWH-tHS-cWW
    • History status: Exact match
  • 5x5 Sarcin-Ricin with intercalated A; G-bulge (2)
  • 102
    163
    • IL_24905.2
    IL_24905.2
    • Basepair signature: cWW-cSW-R-cWW
    • History status: Updated, 1 parent
    72
    164
    • IL_42898.1
    IL_42898.1
    • Basepair signature: cWW-tWH-tWH-tWH-cSH-tHW-tHW-cWW
    • History status: Exact match
  • tWH-tWH-tHW-tHW (1)
  • 122
    165
    • IL_18894.1
    IL_18894.1
    • Basepair signature: cWW-tSH-tSH-tHS-tHS-cWW
    • History status: New id, 1 parent
  • Quadruple sheared (2)
  • 122
    166
    • IL_01375.1
    IL_01375.1
    • Basepair signature: cWW-R-R-tWH-L-R-cWW
    • History status: Exact match
    102
    167
    • IL_39448.1
    IL_39448.1
    • Basepair signature: cWW-cWW-L-R-tHS-cWW
    • History status: Exact match
    102
    168
    • IL_77870.1
    IL_77870.1
    • Basepair signature: cWW-bif-L-L-L-tHS-cWW-cWW
    • History status: Exact match
    132
    169
    • IL_06171.1
    IL_06171.1
    • Basepair signature: cWW-tHW-L-tHS-cWW
    • History status: New id, 2 parents
    92
    170
    • IL_25167.1
    IL_25167.1
    • Basepair signature: cWW-L-tWH-R-R-R-cWW
    • History status: Exact match
  • Major groove platform; stack outside cWW (1)
  • 92
    171
    • IL_64611.1
    IL_64611.1
    • Basepair signature: cWW-tSH-tHH-tHS-cWW
    • History status: Exact match
  • tSH-tHH-tHS (1)
  • 102
    172
    • IL_83675.1
    IL_83675.1
    • Basepair signature: cWW-R-tSS-tWW-tWW-cWW
    • History status: New id, 1 parent
  • Kink-turn related (1)
  • 112
    173
    • IL_32705.1
    IL_32705.1
    • Basepair signature: cWW-R-tWH-cSW-L-R-R-L-tHS-cWW
    • History status: Exact match
    142
    174
    • IL_06267.1
    IL_06267.1
    • Basepair signature: cWW-cWW-L-R-R-R-L-L-cWW-cWW
    • History status: Exact match
    141
    175
    • IL_35058.1
    IL_35058.1
    • Basepair signature: cWW-tSW-L-cWS-tSW-R-R-cWW
    • History status: Exact match
  • Symmetric double minor groove platform (1)
  • 91
    176
    • IL_60287.1
    IL_60287.1
    • Basepair signature: cWW-cHW-cWW-cWW
    • History status: Exact match
    81
    177
    • IL_92343.1
    IL_92343.1
    • Basepair signature: cWW-L-R-R-R-L-L-cWW
    • History status: New id, no parents
    101
    178
    • IL_09820.1
    IL_09820.1
    • Basepair signature: cWW-cWW-cWW
    • History status: Exact match
    61
    179
    • IL_19048.1
    IL_19048.1
    • Basepair signature: cWW-bif-bif-L-L-cSW-cWW-cSH-R-cWW
    • History status: Exact match
    141
    180
    • IL_29821.1
    IL_29821.1
    • Basepair signature: cWW-tWH-L-R-tHS-cWW
    • History status: Exact match
    101
    181
    • IL_94878.1
    IL_94878.1
    • Basepair signature: cWW-cWW-L-R-R-R-R-R-R-R-R-R-R-L-L-L-L-L-tHH-tHS-cWW
    • History status: New id, no parents
    261
    182
    • IL_02086.1
    IL_02086.1
    • Basepair signature: cWW-R-tHS-cWW
    • History status: Exact match
    71
    183
    • IL_22821.1
    IL_22821.1
    • Basepair signature: cWW-tHW-L-R-R-R-L-L-L-L-L-L-L-cWW
    • History status: Exact match
  • Pseudoknot (1)
  • 171
    184
    • IL_33557.1
    IL_33557.1
    • Basepair signature: cWW-cWW-tHH-L-R-R-R-L-L-L-cWW
    • History status: New id, no parents
    141
    185
    • IL_58390.1
    IL_58390.1
    • Basepair signature: cWW-bif-tSW-L-L-L-cWW-cSW-R-cWW
    • History status: Exact match
    141
    186
    • IL_89731.1
    IL_89731.1
    • Basepair signature: cWW-R-tWH-R-R-R-cWW
    • History status: Exact match
    101
    187
    • IL_06300.1
    IL_06300.1
    • Basepair signature: cWW-tSH-L-R-L-cWW
    • History status: Exact match
    91
    188
    • IL_16702.1
    IL_16702.1
    • Basepair signature: cWW-tSH-tWH-tHW-cWH-tSS-tHW-tHH-cWW
    • History status: Exact match
    151
    189
    • IL_25738.1
    IL_25738.1
    • Basepair signature: cWW-L-L-L-L-L-L-cWW
    • History status: Exact match
    101
    190
    • IL_44325.1
    IL_44325.1
    • Basepair signature: cWW-cWH-R-cWW
    • History status: Exact match
    61
    191
    • IL_70801.1
    IL_70801.1
    • Basepair signature: cWW-L-R-R-tWW-cWW-cWW-cWW
    • History status: Exact match
    131
    192
    • IL_09986.1
    IL_09986.1
    • Basepair signature: cWW-L-R-L-tHW-L-L-cWW
    • History status: Exact match
    111
    193
    • IL_19296.1
    IL_19296.1
    • Basepair signature: cWW-cSS-L-tHW-tSS-L-L-L-L-L-L-cWW
    • History status: New id, no parents
    141
    194
    • IL_46937.1
    IL_46937.1
    • Basepair signature: cWW-L-R-cWW
    • History status: New id, no parents
    61
    195
    • IL_55896.1
    IL_55896.1
    • Basepair signature: cWW-tSH-tHS-tWS-cWW
    • History status: Exact match
  • tSH-tHS-tWS (1)
  • 101
    196
    • IL_64842.1
    IL_64842.1
    • Basepair signature: cWW-L-L-L-tWH-cSH-cWW
    • History status: New id, no parents
    101
    197
    • IL_75392.1
    IL_75392.1
    • Basepair signature: cWW-L-R-R-R-L-L-L-L-tSS-R-R-R-cWW
    • History status: Exact match
    161
    198
    • IL_84315.1
    IL_84315.1
    • Basepair signature: cWW-tHS-cWS-R-tSW-R-R-cWW
    • History status: New id, no parents
    101
    199
    • IL_02130.1
    IL_02130.1
    • Basepair signature: cWW-cWW-cWW
    • History status: Exact match
  • Isolated near basepair (1)
  • 61
    200
    • IL_14397.1
    IL_14397.1
    • Basepair signature: cWW-tWH-tHH-tHS-cWW
    • History status: New id, no parents
    101
    201
    • IL_49410.1
    IL_49410.1
    • Basepair signature: cWW-tSH-L-tHS-cWW
    • History status: New id, 1 parent
  • UAA/GAN variation (1)
  • 91
    202
    • IL_67834.1
    IL_67834.1
    • Basepair signature: cWW-R-R-R-R-R-R-tWW-R-R-R-R-R-R-R-R-R-R-R-R-cWW
    • History status: Exact match
    241
    203
    • IL_98711.1
    IL_98711.1
    • Basepair signature: cWW-tSH-tHW-tWW-cWW
    • History status: Exact match
  • tSH-tHW-tWW (1)
  • 101
    204
    • IL_16834.1
    IL_16834.1
    • Basepair signature: cWW-L-R-cWW-L-L-tSW-L-cWW
    • History status: Exact match
    131
    205
    • IL_51366.1
    IL_51366.1
    • Basepair signature: cWW-tWW-L-tWH-R-R-R-R-R-R-R-tHH-tHS-cWW
    • History status: Exact match
    201
    206
    • IL_92889.1
    IL_92889.1
    • Basepair signature: cWW-cWW-L-R-R-R-R-R-R-R-R-R-R-L-L-L-L-L-tHH-tHS-cWW
    • History status: Exact match
    261
    207
    • IL_30113.1
    IL_30113.1
    • Basepair signature: cWW-tSS-L-cSS-R-L-L-L-L-cWW
    • History status: Exact match
    111
    208
    • IL_47108.1
    IL_47108.1
    • Basepair signature: cWW-tHH-L-R-R-R-cWW
    • History status: New id, no parents
    101
    209
    • IL_64944.1
    IL_64944.1
    • Basepair signature: cWW-cWW-cSH-tHW-L-cWW
    • History status: Exact match
    111
    210
    • IL_84409.1
    IL_84409.1
    • Basepair signature: cWW-tSS-tHH-tWW-cSS-tWH-tSW-cWS-cHW-cSS-cSH-cWH-cHW-cSH-tWH-R-cWW
    • History status: Exact match
    231
    211
    • IL_14754.1
    IL_14754.1
    • Basepair signature: cWW-cWW-L-R-R-R-R-R-R-R-R-R-cWW
    • History status: Exact match
    161
    212
    • IL_34013.1
    IL_34013.1
    • Basepair signature: cWW-L-R-cWW
    • History status: Exact match
    61
    213
    • IL_90157.1
    IL_90157.1
    • Basepair signature: cWW-L-L-L-L-tHH-cWS-cWW
    • History status: Exact match
    121
    214
    • IL_98876.1
    IL_98876.1
    • Basepair signature: cWW-cWW-L-R-R-tHW-bif-cWW
    • History status: New id, no parents
    131
    215
    • IL_35352.1
    IL_35352.1
    • Basepair signature: cWW-cWW-R-cWW
    • History status: New id, 1 parent
    71
    216
    • IL_45257.1
    IL_45257.1
    • Basepair signature: cWW-tSH-cWH-tWH-tSS-tHW-tHH-cWW
    • History status: Exact match
    141
    217
    • IL_51528.1
    IL_51528.1
    • Basepair signature: cWW-L-L-tSS-L-R-R-R-cWW
    • History status: Exact match
  • Kink-turn (1)
  • 111
    218
    • IL_61242.1
    IL_61242.1
    • Basepair signature: cWW-cWW-L-R-cWW-cWW
    • History status: Exact match
    101
    219
    • IL_72316.1
    IL_72316.1
    • Basepair signature: cWW-L-R-R-R-L-L-cSS-tSS-cWW
    • History status: Exact match
    141
    220
    • IL_93094.1
    IL_93094.1
    • Basepair signature: cWW-tSH-tHH-R-R-R-cWW
    • History status: Exact match
  • Reverse kink-turn (1)
  • 111
    221
    • IL_20245.1
    IL_20245.1
    • Basepair signature: cWW-L-R-R-R-R-L-L-L-L-L-L-L-L-L-L-L-L-cWW-L-R-cWW
    • History status: Exact match
    251
    222
    • IL_30294.1
    IL_30294.1
    • Basepair signature: cWW-L-R-tSS-L-tSH-L-R-L-cWW-cWW
    • History status: Exact match
  • Kink-turn (1)
  • 151
    223
    • IL_56034.1
    IL_56034.1
    • Basepair signature: cWW-L-R-R-R-L-L-cWW
    • History status: Exact match
    101
    224
    • IL_75840.1
    IL_75840.1
    • Basepair signature: cWW-L-R-cWW
    • History status: Exact match
    61
    225
    • IL_85630.1
    IL_85630.1
    • Basepair signature: cWW-cWW-L-R-R-R-R-R-L-tHS-cWW
    • History status: Exact match
    151
    226
    • IL_95811.1
    IL_95811.1
    • Basepair signature: cWW-L-L-L-cWW-L-bif-cWW
    • History status: Exact match
  • Vitamin B12 Aptamer (1)
  • 111
    227
    • IL_03420.1
    IL_03420.1
    • Basepair signature: cWW-R-cSH-tWH-tSH-tHS-cWW
    • History status: Exact match
    131
    228
    • IL_23735.1
    IL_23735.1
    • Basepair signature: cWW-R-R-cWW-tSS-cWW-cWW-L-L-L-L-L-L-L-cWW-cSS-cSS-L-cWW-cWW
    • History status: New id, no parents
    261
    229
    • IL_41414.1
    IL_41414.1
    • Basepair signature: cWW-cWW-R-R-cSH-R-bif-tWH-R-R-R-R-cWS-cWW
    • History status: Exact match
    211
    230
    • IL_68157.1
    IL_68157.1
    • Basepair signature: cWW-tHH-cHH-cWW
    • History status: New id, 1 parent
  • Major groove platform (1)
  • 51
    231
    • IL_79734.1
    IL_79734.1
    • Basepair signature: cWW-R-R-R-R-cWW
    • History status: Exact match
    81
    232
    • IL_90348.1
    IL_90348.1
    • Basepair signature: cWW-R-R-R-cWW
    • History status: Exact match
    71
    233
    • IL_08061.1
    IL_08061.1
    • Basepair signature: cWW-L-R-R-R-L-L-L-cWW
    • History status: Exact match
    111
    234
    • IL_27833.1
    IL_27833.1
    • Basepair signature: cWW-L-R-cWW
    • History status: Exact match
    61
    235
    • IL_35410.1
    IL_35410.1
    • Basepair signature: cWW-cSH-tWH-cSH-cWS-cWW
    • History status: Exact match
  • C-loop (1)
  • 71
    236
    • IL_73523.1
    IL_73523.1
    • Basepair signature: cWW-cWW-L-cSW-L-tHS-cWW
    • History status: Exact match
    121
    237
    • IL_93585.1
    IL_93585.1
    • Basepair signature: cWW-L-L-L-tWH-cSH-L-cWW-cWW
    • History status: Exact match
    111
    238
    • IL_20460.1
    IL_20460.1
    • Basepair signature: cWW-tHH-L-R-L-cWW
    • History status: New id, 1 parent
    91
    239
    • IL_30823.1
    IL_30823.1
    • Basepair signature: cWW-tSH-tSH-tHS-L-cWW
    • History status: New id, 1 parent
  • Triple sheared related (1)
  • 111
    240
    • IL_56105.1
    IL_56105.1
    • Basepair signature: cWW-tHS-cSH-tHS-cWW
    • History status: Exact match
    81
    241
    • IL_65055.1
    IL_65055.1
    • Basepair signature: cWW-tWW-L-R-R-L-L-L-L-L-L-L-L-L-L-L-L-L-L-cWW
    • History status: Exact match
    231
    242
    • IL_95942.1
    IL_95942.1
    • Basepair signature: cWW-L-R-L-L-L-L-L-cWW
    • History status: Exact match
    111
    243
    • IL_15795.1
    IL_15795.1
    • Basepair signature: cWW-cSH-R-cWW
    • History status: Exact match
  • Minor groove platform (1)
  • 61
    244
    • IL_34223.1
    IL_34223.1
    • Basepair signature: cWW-tWH-cSH-cWW
    • History status: Exact match
  • Receptor of 11-nt loop-receptor motif (1)
  • 81
    245
    • IL_41593.1
    IL_41593.1
    • Basepair signature: cWW-cHW-tHW-tHW-tHW-bif-cWW
    • History status: New id, no parents
    141
    246
    • IL_49850.1
    IL_49850.1
    • Basepair signature: cWW-L-R-L-L-L-cWW-cSW-R-cWW
    • History status: New id, no parents
    131
    247
    • IL_59490.1
    IL_59490.1
    • Basepair signature: cWW-cWW-tHH-cWW
    • History status: Exact match
    81
    248
    • IL_99902.1
    IL_99902.1
    • Basepair signature: cWW-L-R-R-R-R-R-cWW
    • History status: Exact match
    101
    249
    • IL_17765.1
    IL_17765.1
    • Basepair signature: cWW-cSS-cWH-tSS-cWH-R-tWH-R-cWW
    • History status: Exact match
    141
    250
    • IL_27888.1
    IL_27888.1
    • Basepair signature: cWW-R-bif-tHW-tHS-cWW
    • History status: Exact match
    101
    251
    • IL_45978.1
    IL_45978.1
    • Basepair signature: cWW-R-R-cWW-cWW-cWW
    • History status: Exact match
    101
    252
    • IL_51877.1
    IL_51877.1
    • Basepair signature: cWW-L-L-tWW-L-L-L-cWS-cWW
    • History status: Exact match
    131
    253
    • IL_61275.1
    IL_61275.1
    • Basepair signature: cWW-L-R-tHW-cWW
    • History status: Exact match
    81
    254
    • IL_82194.1
    IL_82194.1
    • Basepair signature: cWW-L-R-R-R-cWW
    • History status: Exact match
    81
    255
    • IL_11882.1
    IL_11882.1
    • Basepair signature: cWW-L-R-R-tHW-tHW-L-R-cWW
    • History status: Exact match
    131
    256
    • IL_20463.1
    IL_20463.1
    • Basepair signature: cWW-L-R-R-R-cWH-R-tHH-cSH-tWH-tHS-cWW
    • History status: Exact match
  • 7x11 Sarcin-Ricin with pseudoknotted region; G-bulge (1)
  • 181
    257
    • IL_47365.1
    IL_47365.1
    • Basepair signature: cWW-cWW-bif-cSH-R-cWW
    • History status: New id, 1 parent
    81
    258
    • IL_76103.1
    IL_76103.1
    • Basepair signature: cWW-R-cWW
    • History status: New id, 1 parent
  • Stack outside cWW (1)
  • 51
    259
    • IL_85931.1
    IL_85931.1
    • Basepair signature: cWW-cSW-tSH-tHH-tSS-tSS-R-R-cWW
    • History status: Exact match
    131
    260
    • IL_96335.1
    IL_96335.1
    • Basepair signature: cWW-cSH-L-tSH-cWW-R-R-cWW
    • History status: Exact match
    111
    261
    • IL_04356.1
    IL_04356.1
    • Basepair signature: cWW-tWH-tWH-L-R-L-tWW-cWW
    • History status: Exact match
    131
    262
    • IL_23934.1
    IL_23934.1
    • Basepair signature: cWW-R-tWH-tHS-cWW
    • History status: Exact match
  • tSH-tHW (1)
  • 91
    263
    • IL_59645.1
    IL_59645.1
    • Basepair signature: cWW-cSH-L-L-L-cWW
    • History status: Exact match
    81
    264
    • IL_80617.1
    IL_80617.1
    • Basepair signature: cWW-L-R-cWW
    • History status: Exact match
    61
    265
    • IL_17971.1
    IL_17971.1
    • Basepair signature: cWW-tWW-L-tWW-L-cWW
    • History status: New id, no parents
    101
    266
    • IL_45988.1
    IL_45988.1
    • Basepair signature: cWW-R-tWH-tHS-cWW
    • History status: Exact match
    91
    267
    • IL_74184.1
    IL_74184.1
    • Basepair signature: cWW-L-L-L-L-L-tHS-cWW
    • History status: Exact match
    111
    268
    • IL_94351.1
    IL_94351.1
    • Basepair signature: cWW-tSH-L-R-L-tHS-cWW
    • History status: Exact match
    111
    269
    • IL_12750.1
    IL_12750.1
    • Basepair signature: cWW-L-R-cWW-L-R-R-R-R-L-L-cWW
    • History status: New id, no parents
    151
    270
    • IL_31504.1
    IL_31504.1
    • Basepair signature: cWW-tSS-tHH-cSW-bif-tSH-tWH-R-R-tHS-cWW-cWW
    • History status: Exact match
    181
    271
    • IL_47743.1
    IL_47743.1
    • Basepair signature: cWW-cSW-tWH-cSH-L-cWS-cWW
    • History status: New id, no parents
    91
    272
    • IL_04736.1
    IL_04736.1
    • Basepair signature: cWW-tSW-L-R-R-L-tWS-cWW
    • History status: Exact match
    121
    273
    • IL_24106.1
    IL_24106.1
    • Basepair signature: cWW-tSH-tWH-tWH-R-R-R-R-R-R-R-cWW
    • History status: New id, no parents
    171
    274
    • IL_34590.1
    IL_34590.1
    • Basepair signature: cWW-L-R-R-R-R-L-L-tHH-cSH-tWH-tHS-cWW
    • History status: Exact match
  • 9x9 Sarcin-Ricin with pseudoknotted region; G-bulge (1)
  • 181
    275
    • IL_50425.1
    IL_50425.1
    • Basepair signature: cWW-cWW
    • History status: New id, 1 parent
  • Single bulged U (1)
  • 41
    276
    • IL_59713.1
    IL_59713.1
    • Basepair signature: cWW-cWW
    • History status: New id, no parents
  • Single bulged G (1)
  • 41
    277
    • IL_90922.1
    IL_90922.1
    • Basepair signature: cWW-tSH-tWH-tHS-tSS-tSS-R-cWW
    • History status: Exact match
  • Kink-turn (1)
  • 121
    278
    • IL_28512.1
    IL_28512.1
    • Basepair signature: cWW-L-L-L-L-L-L-L-L-L-cWW
    • History status: New id, 1 parent
    131
    279
    • IL_46112.1
    IL_46112.1
    • Basepair signature: cWW-L-L-L-L-L-cWW
    • History status: Exact match
    91
    280
    • IL_61852.1
    IL_61852.1
    • Basepair signature: cWW-cWW-tSH-tWH-tHS-tSS-tSS-R-cWW
    • History status: Exact match
  • Kink-turn (1)
  • 141
    281
    • IL_74271.1
    IL_74271.1
    • Basepair signature: cWW-L-L-L-tWH-L-L-L-cWW
    • History status: Exact match
    121
    282
    • IL_82988.1
    IL_82988.1
    • Basepair signature: cWW-cWW-L-L-tHS-cWW
    • History status: Exact match
    101
    283
    • IL_21121.1
    IL_21121.1
    • Basepair signature: cWW-tSW-tWH-tSW-cSH-cWS-R-R-cWW-cWW
    • History status: Exact match
    111
    284
    • IL_31890.1
    IL_31890.1
    • Basepair signature: cWW-L-R-R-L-L-cWW
    • History status: Exact match
    91
    285
    • IL_39287.1
    IL_39287.1
    • Basepair signature: cWW-tSH-tHS-tSS-L-R-R-R-R-R-cWW
    • History status: New id, no parents
    151
    286
    • IL_56501.1
    IL_56501.1
    • Basepair signature: cWW-cWW-tHH-cSH-tWH-tHS-cWW
    • History status: Exact match
  • 7x6 Sarcin-Ricin with UU cWW pair; G-bulge (1)
  • 131
    287
    • IL_76919.1
    IL_76919.1
    • Basepair signature: cWW-R-R-R-tHS-cWW
    • History status: Exact match
    91
    288
    • IL_96942.1
    IL_96942.1
    • Basepair signature: cWW-L-R-R-R-tHW-tHW-bif-cWW
    • History status: Exact match
    141
    289
    • IL_15978.1
    IL_15978.1
    • Basepair signature: cWW-R-cSW-R-R-tHS-cWW
    • History status: Exact match
    111
    290
    • IL_42092.1
    IL_42092.1
    • Basepair signature: cWW-tSH-L-L-L-cWW
    • History status: Exact match
  • Isolated basepair with bulged bases (1)
  • 91
    291
    • IL_59724.1
    IL_59724.1
    • Basepair signature: cWW-bif-tSH-tHW-cSH-tHH-bif-cWW
    • History status: Exact match
  • 8x7 Sarcin-Ricin with CC bifurcated pair; G-bulge (1)
  • 151
    292
    • IL_68913.1
    IL_68913.1
    • Basepair signature: cWW-L-R-R-L-L-L-cSH-L-L-cWW
    • History status: Exact match
    141
    293
    • IL_28999.1
    IL_28999.1
    • Basepair signature: cWW-R-R-R-tSW-L-cWW
    • History status: Exact match
    101
    294
    • IL_36582.1
    IL_36582.1
    • Basepair signature: cWW-L-R-L-tHH-L-tWH-tHS-cWW
    • History status: Exact match
  • 8x6 Sarcin-Ricin with inserted A; G-bulge (1)
  • 141
    295
    • IL_46401.1
    IL_46401.1
    • Basepair signature: cWW-L-L-L-L-tHH-cWW
    • History status: Exact match
    101
    296
    • IL_54670.1
    IL_54670.1
    • Basepair signature: cWW-tSH-L-R-tHH-tHS-cWW
    • History status: Exact match
    121
    297
    • IL_63059.1
    IL_63059.1
    • Basepair signature: cWW-cSW-L-R-tHH-L-R-R-cSH-cWW
    • History status: Exact match
    141
    298
    • IL_74719.1
    IL_74719.1
    • Basepair signature: cWW-tSH-tHS-cWW
    • History status: Exact match
  • Double sheared (1)
  • 81
    299
    • IL_94466.1
    IL_94466.1
    • Basepair signature: cWW-L-L-L-L-cWW
    • History status: Exact match
    81
    300
    • IL_01335.1
    IL_01335.1
    • Basepair signature: cWW-cHW-L-L-L-L-L-L-L-L-cWW
    • History status: Exact match
    141
    301
    • IL_13013.1
    IL_13013.1
    • Basepair signature: cWW-tWW-L-tWH-R-R-R-cSH-R-R-L-tHH-tHS-cWW
    • History status: Exact match
    211
    302
    • IL_39409.1
    IL_39409.1
    • Basepair signature: cWW-R-R-tWH-tSH-tHS-cWW
    • History status: Exact match
    121
    303
    • IL_56867.1
    IL_56867.1
    • Basepair signature: cWW-L-R-R-L-L-cSS-L-cWW-cWW
    • History status: New id, no parents
    131
    304
    • IL_77253.1
    IL_77253.1
    • Basepair signature: cWW-L-cWW
    • History status: Exact match
    51
    305
    • IL_97253.1
    IL_97253.1
    • Basepair signature: cWW-L-R-R-R-R-R-R-R-L-L-cWW
    • History status: Exact match
    141
    306
    • IL_34780.1
    IL_34780.1
    • Basepair signature: cWW-L-R-R-L-L-tSH-tSS-cWW-cWW-cWW
    • History status: Exact match
  • Kink-turn (1)
  • 171
    307
    • IL_60240.1
    IL_60240.1
    • Basepair signature: cWW-cWW-cWW
    • History status: Exact match
    61
    308
    • IL_69091.1
    IL_69091.1
    • Basepair signature: cWW-cWW-L-R-R-R-R-L-L-L-L-L-cWW
    • History status: Exact match
    161
    309
    • IL_80920.1
    IL_80920.1
    • Basepair signature: cWW-cWW-cWW-cWW
    • History status: New id, 1 parent
  • Tandem non-canonical cWW pairs (1)
  • 81
    310
    • IL_29509.1
    IL_29509.1
    • Basepair signature: cWW-L-R-tSW-tHH-cSH-tWH-tHS-cWW
    • History status: New id, no parents
    151
    311
    • IL_46461.1
    IL_46461.1
    • Basepair signature: cWW-L-bif-L-cWW-cWW-cWW-L-cWW-tSW-L-L-L-L-L-L-L-L-tHH-tHS-cWW
    • History status: New id, no parents
    311
    312
    • IL_74736.1
    IL_74736.1
    • Basepair signature: cWW-tSH-L-R-R-L-cWW
    • History status: New id, no parents
    91
    313
    • IL_94501.1
    IL_94501.1
    • Basepair signature: cWW-cWW-cWW-tHW-cWH-cSH-cWH-cSH-tHS-cWW
    • History status: New id, no parents
    151
    314
    • IL_13394.1
    IL_13394.1
    • Basepair signature: cWW-L-R-R-R-R-tSS-R-R-R-R-R-R-R-R-L-L-L-cWW
    • History status: Exact match
    221
    315
    • IL_22436.1
    IL_22436.1
    • Basepair signature: cWW-L-cSS-tWH-tHW-cWW-cWW
    • History status: Exact match
  • Kink-turn related (1)
  • 111
    316
    • IL_32181.1
    IL_32181.1
    • Basepair signature: cWW-cWW-cWW-L-cSW-L-R-R-R-cWW
    • History status: Exact match
    151
    317
    • IL_97256.1
    IL_97256.1
    • Basepair signature: cWW-tSH-L-R-R-L-L-L-cWW
    • History status: Exact match
    121
    318
    • IL_16160.1
    IL_16160.1
    • Basepair signature: cWW-L-R-cWW
    • History status: Exact match
    61
    319
    • IL_43454.1
    IL_43454.1
    • Basepair signature: cWW-L-L-cWW
    • History status: Exact match
    61
    320
    • IL_50789.1
    IL_50789.1
    • Basepair signature: cWW-L-L-L-cWW
    • History status: New id, no parents
    71
    321
    • IL_69457.1
    IL_69457.1
    • Basepair signature: cWW-L-L-L-L-L-tHH-tHS-cWW
    • History status: Exact match
    131
    322
    • IL_19022.1
    IL_19022.1
    • Basepair signature: cWW-tSH-R-tHH-tHS-cWW
    • History status: Exact match
    111
    323
    • IL_46732.1
    IL_46732.1
    • Basepair signature: cWW-R-R-tHS-cWW
    • History status: Exact match
    81
    324
    • IL_54896.1
    IL_54896.1
    • Basepair signature: cWW-L-L-L-L-L-L-tSS-cWW
    • History status: Exact match
    121
    325
    • IL_01502.1
    IL_01502.1
    • Basepair signature: cWW-L-R-R-L-L-L-L-cWW-cWW
    • History status: Exact match
    131
    326
    • IL_22745.1
    IL_22745.1
    • Basepair signature: cWW-L-cWW
    • History status: Exact match
    51
    327
    • IL_39507.1
    IL_39507.1
    • Basepair signature: cWW-L-R-L-L-L-cWW
    • History status: Exact match
    91
    328
    • IL_49109.1
    IL_49109.1
    • Basepair signature: cWW-tSH-tSH-tHW-tHH-tHS-cWW-cWW
    • History status: New id, no parents
  • tSH-tHW-tHH-tHS (1)
  • 161
    329
    • IL_89055.1
    IL_89055.1
    • Basepair signature: cWW-cWW-L-R-R-L-L-L-L-L-cWW-cWW
    • History status: Exact match
    161

    Coloring options:


    Updated, 2 parents 14; Exact match 193; Updated, 1 parent 42; New id, 2 parents 18; New id, no parents 26; New id, > 2 parents 9; New id, 1 parent 27;

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