#Varna 2DMotifNtsSize
1
  • HL_30528.1
HL_30528.1
  • Basepair signature: cWW-tSH-R-R
  • History status: New id, 1 parent
  • Name: GNRA Hairpin motifs
6400
2
  • HL_73671.1
HL_73671.1
  • Basepair signature: cWW-R-R-tWH-R-R-R
  • History status: New id, 1 parent
  • Name: T-loops with two bulged bases
9117
3
  • HL_48112.1
HL_48112.1
  • Basepair signature: cWW-tSW-R
  • History status: New id, 2 parents
659
4
  • HL_72935.1
HL_72935.1
  • Basepair signature: cWW-tSH-R-R-R-R
  • History status: New id, 1 parent
  • Name: Double sheared (tSH) with U-turn
842
5
  • HL_72253.1
HL_72253.1
  • Basepair signature: cWW-bif-R-R-R-R-R
  • History status: New id, 1 parent
  • Name: tRNA Anti-Codon loop
942
6
  • HL_41542.1
HL_41542.1
  • Basepair signature: cWW-R-R-R-R-R
  • History status: New id, 1 parent
  • Name: Kissing Hairpin motif
830
7
  • HL_56406.1
HL_56406.1
  • Basepair signature: cWW-R-R-R-R
  • History status: New id, 2 parents
728
8
  • HL_56205.1
HL_56205.1
  • Basepair signature: cWW-R-tSH-R-R-R-R
  • History status: New id, 1 parent
1026
9
  • HL_90745.1
HL_90745.1
  • Basepair signature: cWW-tSH-R-R
  • History status: New id, 1 parent
624
10
  • HL_68864.1
HL_68864.1
  • Basepair signature: cWW-tWH-R-R-R
  • History status: New id, 1 parent
  • Name: T-loops with 1 bulged base
724
11
  • HL_08396.1
HL_08396.1
  • Basepair signature: cWW-R
  • History status: New id, 1 parent
422
12
  • HL_79306.1
HL_79306.1
  • Basepair signature: cWW-bif-R-tSH-R
  • History status: New id, 1 parent
  • Name: LSU Helix 71 (H71) Hairpin Loop.
820
13
  • HL_82706.1
HL_82706.1
  • Basepair signature: cWW-tSH-R-R-R
  • History status: New id, 1 parent
  • Name: LSU Helix 13 (H13) Hairpin loop. GNRA-like.
719
14
  • HL_06138.1
HL_06138.1
  • Basepair signature: cWW-cWW-R-R-R
  • History status: New id, 1 parent
  • Name: SSU Helix 37 (h37) Hairpin loop.
818
15
  • HL_03270.1
HL_03270.1
  • Basepair signature: cWW-R
  • History status: New id, 1 parent
  • Name: MS2 virus RNA Hairpin
418
16
  • HL_55724.1
HL_55724.1
  • Basepair signature: cWW-R-R
  • History status: New id, 1 parent
  • Name: LSU Helix 60A. LSU Helix 63A.
518
17
  • HL_69480.1
HL_69480.1
  • Basepair signature: cWW-R-R-tWH
  • History status: New id, 1 parent
  • Name: LSU Helix 20 Hairpin loop
818
18
  • HL_60919.1
HL_60919.1
  • Basepair signature: cWW-R-R-R-R-R
  • History status: New id, 1 parent
817
19
  • HL_38117.1
HL_38117.1
  • Basepair signature: cWW-tSH-tHH-tWW-R-R-R
  • History status: New id, 1 parent
  • Name: LSU Helix 81 (H81) Hairpin Loop
1315
20
  • HL_55197.1
HL_55197.1
  • Basepair signature: cWW-tWH-R-tSH-R
  • History status: New id, 1 parent
  • Name: LSU Helix 53 (H53) Hairpin Loop. T-loop like.
915
21
  • HL_36830.1
HL_36830.1
  • Basepair signature: cWW-R-R
  • History status: New id, 1 parent
615
22
  • HL_26938.1
HL_26938.1
  • Basepair signature: cWW-tSH-R-R-R
  • History status: New id, 1 parent
714
23
  • HL_03958.1
HL_03958.1
  • Basepair signature: cWW-R-R-R-R-R-R-R-R-R
  • History status: New id, 1 parent
  • Name: U1A protein-binding Hairpin Loop.
1214
24
  • HL_03712.1
HL_03712.1
  • Basepair signature: cWW-R-R-R
  • History status: New id, 2 parents
  • Name: LSU Helix 96 (H96) Hairpin Loop
614
25
  • HL_05568.1
HL_05568.1
  • Basepair signature: cWW-tSH-R-R-R-R-R
  • History status: New id, 1 parent
  • Name: LSU H89 Hairpin Loop
914
26
  • HL_11434.1
HL_11434.1
  • Basepair signature: cWW-R-R-R-R
  • History status: New id, 1 parent
  • Name: LSU Helix 22 (H22) Hairpin Loop. Forms Pseudknot.
714
27
  • HL_90168.1
HL_90168.1
  • Basepair signature: cWW-R-R-tWH-R
  • History status: New id, 1 parent
  • Name: LSU Helix 72 (H72) Hairpin Loop
1014
28
  • HL_89583.1
HL_89583.1
  • Basepair signature: cWW-R-R-R-R-R
  • History status: New id, 1 parent
  • Name: LSU Helix 39A Hairpin loop
814
29
  • HL_05901.1
HL_05901.1
  • Basepair signature: cWW-R-R-R
  • History status: New id, 1 parent
  • Name: 5S Loop C - Upper part of Hairpin Loop.
613
30
  • HL_77780.1
HL_77780.1
  • Basepair signature: cWW-tWH-tWH-R
  • History status: New id, no parents
1113
31
  • HL_57089.1
HL_57089.1
  • Basepair signature: cWW-cSW-R-R-R-R
  • History status: New id, 1 parent
  • Name: LSU Helix 99A (H99A) Hairpin Loop. Closed by cSW AA.
913
32
  • HL_56490.1
HL_56490.1
  • Basepair signature: cWW-R
  • History status: New id, 1 parent
  • Name: LSU Helix 37 (H37) Hairpin Loop.
613
33
  • HL_70574.1
HL_70574.1
  • Basepair signature: cWW-R-tHW-R-R-R-R-R-R
  • History status: New id, 1 parent
  • Name: SSU Central Pseudoknot (forms helix 2)
1113
34
  • HL_69076.1
HL_69076.1
  • Basepair signature: cWW-tSH-cWH-tSH-tWH-tHW-tHW-tSW
  • History status: New id, 1 parent
  • Name: LSU Helix 97 Hairpin loop
1512
35
  • HL_97879.1
HL_97879.1
  • Basepair signature: cWW
  • History status: New id, 1 parent
511
36
  • HL_95765.1
HL_95765.1
  • Basepair signature: cWW-R-R-R-R-R-R-R-R
  • History status: New id, 1 parent
  • Name: SSU Helix 43 (h43) Hairpin Loop from T.th. T-loop like.
1111
37
  • HL_01306.1
HL_01306.1
  • Basepair signature: cWW-R-tSW-R-R
  • History status: New id, 1 parent
  • Name: LSU Helix 35 (H35) Hairpin Loop
1010
38
  • HL_03271.1
HL_03271.1
  • Basepair signature: cWW-R-R-R-tSH-R-R
  • History status: New id, no parents
1110
39
  • HL_07137.1
HL_07137.1
  • Basepair signature: cWW-cSH
  • History status: New id, 1 parent
  • Name: tRNA D-loop. Sec tRNA
510
40
  • HL_20284.1
HL_20284.1
  • Basepair signature: cWW-R-R-R-R-R-R
  • History status: New id, 2 parents
1010
41
  • HL_89954.1
HL_89954.1
  • Basepair signature: cWW
  • History status: New id, 1 parent
510
42
  • HL_62686.1
HL_62686.1
  • Basepair signature: cWW-R-R-R-R-R-R
  • History status: New id, 1 parent
  • Name: SSU Helix 31 (h31) Hairpin Loop
1010
43
  • HL_32751.1
HL_32751.1
  • Basepair signature: cWW-cSW-R
  • History status: New id, no parents
69
44
  • HL_23455.1
HL_23455.1
  • Basepair signature: cWW
  • History status: New id, 1 parent
49
45
  • HL_04124.1
HL_04124.1
  • Basepair signature: cWW-cWS-R-R-R-R-R
  • History status: New id, no parents
119
46
  • HL_68015.1
HL_68015.1
  • Basepair signature: cWW-R-R-R-R
  • History status: New id, 1 parent
79
47
  • HL_40871.1
HL_40871.1
  • Basepair signature: cWW-cWH-tWH-R-R-R
  • History status: New id, 1 parent
118
48
  • HL_52254.1
HL_52254.1
  • Basepair signature: cWW-cWW-cSS-cSS-R
  • History status: New id, 1 parent
  • Name: Hairpin-Hairpin Interacting HL
118
49
  • HL_69432.1
HL_69432.1
  • Basepair signature: cWW-R-tSW-R
  • History status: New id, 1 parent
  • Name: LSU Helix 35A (H35A) Hairpin Loop
68
50
  • HL_12776.1
HL_12776.1
  • Basepair signature: cWW-R-R-R-R-R-R-R
  • History status: New id, 1 parent
  • Name: SSU Central Pseudoknot (forms helix 2)
107
51
  • HL_84417.1
HL_84417.1
  • Basepair signature: cWW-cSW-R-R
  • History status: New id, 1 parent
  • Name: GNRA-like with 5'-stacking of first unpaired base.
67
52
  • HL_25023.1
HL_25023.1
  • Basepair signature: cWW-cWH-R-R-R-R
  • History status: New id, no parents
97
53
  • HL_83191.1
HL_83191.1
  • Basepair signature: cWW-R
  • History status: New id, no parents
57
54
  • HL_26295.1
HL_26295.1
  • Basepair signature: cWW-tSH-R-R-R
  • History status: New id, 1 parent
77
55
  • HL_27052.1
HL_27052.1
  • Basepair signature: cWW-R-R
  • History status: New id, 1 parent
  • Name: LSU Helix 12 (H12) Hairpin Loop. GNRA-like with altered stacking
67
56
  • HL_87993.1
HL_87993.1
  • Basepair signature: cWW-cWW-tSW-R
  • History status: New id, no parents
97
57
  • HL_22130.1
HL_22130.1
  • Basepair signature: cWW-cWW-R-R-R-R-R
  • History status: New id, no parents
117
58
  • HL_75243.1
HL_75243.1
  • Basepair signature: cWW-R-tSH-R-R
  • History status: New id, no parents
86
59
  • HL_94809.1
HL_94809.1
  • Basepair signature: cWW
  • History status: New id, no parents
46
60
  • HL_18683.1
HL_18683.1
  • Basepair signature: cWW-R-R-R-R-R-R
  • History status: New id, no parents
96
61
  • HL_42514.1
HL_42514.1
  • Basepair signature: cWW-cWS-R
  • History status: New id, 2 parents
96
62
  • HL_58385.1
HL_58385.1
  • Basepair signature: cWW-R-cSW-R-cSH
  • History status: New id, 1 parent
  • Name: cHS GU/cWS Double Platform creates Intercalation site
96
63
  • HL_23500.1
HL_23500.1
  • Basepair signature: cWW-cWW-R-tSH-R-tSH-R-R
  • History status: New id, no parents
136
64
  • HL_92806.1
HL_92806.1
  • Basepair signature: cWW-R-R-R-R-R-R
  • History status: New id, 1 parent
  • Name: LSU Helix 7 (H7) Hairpin Loop. Forms Pseudo-knot
96
65
  • HL_31303.1
HL_31303.1
  • Basepair signature: cWW-tSH-R-tHW-R-R
  • History status: New id, no parents
116
66
  • HL_14932.1
HL_14932.1
  • Basepair signature: cWW-tSH-R
  • History status: New id, no parents
56
67
  • HL_41768.1
HL_41768.1
  • Basepair signature: cWW-cWS-cSH-R-R-R
  • History status: New id, no parents
106
68
  • HL_61729.1
HL_61729.1
  • Basepair signature: cWW-tWH-tHS-tWH-R-R-R
  • History status: New id, 1 parent
126
69
  • HL_74437.1
HL_74437.1
  • Basepair signature: cWW-R
  • History status: New id, 2 parents
46
70
  • HL_71221.1
HL_71221.1
  • Basepair signature: cWW-cWW-R-R-R-R-R-R-R-R-R-R-R-R
  • History status: New id, no parents
175
71
  • HL_35608.1
HL_35608.1
  • Basepair signature: cWW-tSH-R-R-R-R-R
  • History status: New id, 1 parent
  • Name: LSU Helix 69 (H69) Hairpin Loop
105
72
  • HL_47284.1
HL_47284.1
  • Basepair signature: cWW-cWW-cWS-R-R
  • History status: New id, 1 parent
115
73
  • HL_15846.1
HL_15846.1
  • Basepair signature: cWW-R-R
  • History status: New id, 1 parent
  • Name: LSU Helix 8 (H8) Hairpin Loop
65
74
  • HL_96456.1
HL_96456.1
  • Basepair signature: cWW-R-R-R
  • History status: New id, 1 parent
  • Name: GNRA-like. Closed by tSH UC.
75
75
  • HL_08178.1
HL_08178.1
  • Basepair signature: cWW-R-cSS-R-R
  • History status: New id, no parents
95
76
  • HL_40664.1
HL_40664.1
  • Basepair signature: cWW-R-R
  • History status: New id, no parents
55
77
  • HL_05923.1
HL_05923.1
  • Basepair signature: cWW-tSH-R
  • History status: New id, no parents
55
78
  • HL_60814.1
HL_60814.1
  • Basepair signature: cWW-R
  • History status: New id, no parents
55
79
  • HL_21557.1
HL_21557.1
  • Basepair signature: cWW-cWS-tSW
  • History status: New id, 1 parent
85
80
  • HL_95414.1
HL_95414.1
  • Basepair signature: cWW-cWW
  • History status: New id, 1 parent
  • Name: GNRA-like with 5'-stacking of first unpaired base.
65
81
  • HL_97846.1
HL_97846.1
  • Basepair signature: cWW-R-tWH-R-R-R
  • History status: New id, 1 parent
95
82
  • HL_12086.1
HL_12086.1
  • Basepair signature: cWW-R
  • History status: New id, 1 parent
  • Name: Two base, cross-stacked hairpin loop
44
83
  • HL_50248.1
HL_50248.1
  • Basepair signature: cWW-R-R-R-R-R
  • History status: New id, no parents
84
84
  • HL_09582.1
HL_09582.1
  • Basepair signature: cWW-cWW-R-R-R
  • History status: New id, no parents
94
85
  • HL_95265.1
HL_95265.1
  • Basepair signature: cWW-tSH-R-R-R-R
  • History status: New id, 1 parent
94
86
  • HL_16278.1
HL_16278.1
  • Basepair signature: cWW
  • History status: New id, no parents
44
87
  • HL_40187.1
HL_40187.1
  • Basepair signature: cWW-R
  • History status: New id, 2 parents
64
88
  • HL_33862.1
HL_33862.1
  • Basepair signature: cWW-cWW-R-R-R-R-R-R
  • History status: New id, 1 parent
134
89
  • HL_56776.1
HL_56776.1
  • Basepair signature: cWW-R-R-R-R-R-R
  • History status: New id, 1 parent
114
90
  • HL_91546.1
HL_91546.1
  • Basepair signature: cWW-tWH-R-R-R-R
  • History status: New id, 1 parent
94
91
  • HL_35624.1
HL_35624.1
  • Basepair signature: cWW-cWS-R-R-R
  • History status: New id, no parents
104
92
  • HL_25669.1
HL_25669.1
  • Basepair signature: cWW-tSH-R-R-R-R-R-R-R
  • History status: New id, 2 parents
  • Name: SSU Central Pseudoknot (forms helix 2)
124
93
  • HL_74373.1
HL_74373.1
  • Basepair signature: cWW-R-R-R
  • History status: New id, 1 parent
64
94
  • HL_61817.1
HL_61817.1
  • Basepair signature: cWW-R-R
  • History status: New id, 1 parent
  • Name: LSU Helix 12 (H12) Hairpin Loop. GNRA-like with altered stacking
64
95
  • HL_96334.1
HL_96334.1
  • Basepair signature: cWW-R-R
  • History status: New id, no parents
54
96
  • HL_07278.1
HL_07278.1
  • Basepair signature: cWW-R-R-R-R-R-R-R-R
  • History status: New id, 1 parent
  • Name: 16S helix 23 and 24 hairpin loops
114
97
  • HL_09288.1
HL_09288.1
  • Basepair signature: cWW-cWW-R
  • History status: New id, no parents
74
98
  • HL_21095.1
HL_21095.1
  • Basepair signature: cWW-R-R-tWH-R-R-R-R
  • History status: New id, 1 parent
104
99
  • HL_57276.1
HL_57276.1
  • Basepair signature: cWW-tSS-R-R-R
  • History status: New id, no parents
84
100
  • HL_60809.1
HL_60809.1
  • Basepair signature: cWW-cWW-R-R-R-R
  • History status: New id, 1 parent
94
101
  • HL_48953.1
HL_48953.1
  • Basepair signature: cWW-R-R-R-R-R-R-R-R-R-R-R-R
  • History status: New id, no parents
154
102
  • HL_15414.1
HL_15414.1
  • Basepair signature: cWW-R-cWS-R
  • History status: New id, no parents
74
103
  • HL_72793.1
HL_72793.1
  • Basepair signature: cWW
  • History status: New id, 1 parent
54
104
  • HL_61425.1
HL_61425.1
  • Basepair signature: cWW-R-cSH
  • History status: New id, 1 parent
64
105
  • HL_87601.1
HL_87601.1
  • Basepair signature: cWW-R-R-R-R-R-R-R-R
  • History status: New id, no parents
114
106
  • HL_43410.1
HL_43410.1
  • Basepair signature: cWW-R-R-R-R-R
  • History status: New id, no parents
83
107
  • HL_70644.1
HL_70644.1
  • Basepair signature: cWW-R-R-R
  • History status: New id, 1 parent
  • Name: LSU Helix 96 (H96) Hairpin Loop
63
108
  • HL_18012.1
HL_18012.1
  • Basepair signature: cWW-R-R-R
  • History status: New id, 1 parent
63
109
  • HL_79069.1
HL_79069.1
  • Basepair signature: cWW-tSH-tHW-tHW-R-R-R
  • History status: New id, no parents
113
110
  • HL_59077.1
HL_59077.1
  • Basepair signature: cWW-cWW-R-cWS-R-R
  • History status: New id, 2 parents
133
111
  • HL_55829.1
HL_55829.1
  • Basepair signature: cWW-R-R-R-tWH-R-R-R
  • History status: New id, 1 parent
  • Name: SSU Helix 42 (h42) Hairpin Loop. T-loop like.
103
112
  • HL_26016.1
HL_26016.1
  • Basepair signature: cWW-R-tSH-R
  • History status: New id, 1 parent
63
113
  • HL_98833.4
HL_98833.4
  • Basepair signature: cWW-cWS-R-R-R-R
  • History status: Updated, 1 parent
113
114
  • HL_95694.1
HL_95694.1
  • Basepair signature: cWW-cWS-R
  • History status: New id, 1 parent
53
115
  • HL_88741.1
HL_88741.1
  • Basepair signature: cWW-cWW-R-R-tWH-R-tWH-R-R-R
  • History status: New id, 1 parent
143
116
  • HL_03897.1
HL_03897.1
  • Basepair signature: cWW-R-R-R
  • History status: New id, 1 parent
  • Name: GNRA with one bulged base
63
117
  • HL_30483.1
HL_30483.1
  • Basepair signature: cWW-cWS-R
  • History status: New id, no parents
83
118
  • HL_98228.1
HL_98228.1
  • Basepair signature: cWW-R-R
  • History status: New id, no parents
53
119
  • HL_71441.1
HL_71441.1
  • Basepair signature: cWW-cWW-R-R-R
  • History status: New id, no parents
103
120
  • HL_49089.1
HL_49089.1
  • Basepair signature: cWW-cWW-R-R-R
  • History status: New id, no parents
83
121
  • HL_61580.1
HL_61580.1
  • Basepair signature: cWW-cSS-cSH
  • History status: New id, 1 parent
83
122
  • HL_13324.1
HL_13324.1
  • Basepair signature: cWW-cWW-tSH-R
  • History status: New id, 1 parent
83
123
  • HL_42245.1
HL_42245.1
  • Basepair signature: cWW-R-R-R-R-R-R-R-R-R
  • History status: New id, no parents
123
124
  • HL_30879.1
HL_30879.1
  • Basepair signature: cWW-R-R-R
  • History status: New id, 2 parents
63
125
  • HL_81868.1
HL_81868.1
  • Basepair signature: cWW-tSW-R
  • History status: New id, 1 parent
63
126
  • HL_14875.1
HL_14875.1
  • Basepair signature: cWW-cWW-R-R-R-R-R
  • History status: New id, 1 parent
  • Name: SSU Central Pseudoknot (forms helix 2)
103
127
  • HL_22131.1
HL_22131.1
  • Basepair signature: cWW-cWW-R-R
  • History status: New id, no parents
73
128
  • HL_25553.1
HL_25553.1
  • Basepair signature: cWW-R-R-R-cSH-R-R
  • History status: New id, 1 parent
  • Name: LSU Helix 6 (H6) Hairpin Loop.
103
129
  • HL_82040.1
HL_82040.1
  • Basepair signature: cWW-R-R
  • History status: New id, no parents
63
130
  • HL_23290.3
HL_23290.3
  • Basepair signature: cWW-R-R-R-R
  • History status: Updated, 1 parent
73
131
  • HL_93692.1
HL_93692.1
  • Basepair signature: cWW-tSW-R
  • History status: New id, no parents
63
132
  • HL_30125.1
HL_30125.1
  • Basepair signature: cWW-R-tWH-R-R-R-R-R-R-R
  • History status: New id, 1 parent
133
133
  • HL_38130.2
HL_38130.2
  • Basepair signature: cWW-R-R-R-R-R-R-R-R
  • History status: Exact match
112
134
  • HL_03328.1
HL_03328.1
  • Basepair signature: cWW-R-R-cSW
  • History status: New id, 1 parent
62
135
  • HL_02758.1
HL_02758.1
  • Basepair signature: cWW-R-R
  • History status: New id, 1 parent
52
136
  • HL_32608.1
HL_32608.1
  • Basepair signature: cWW-cWW-R-R
  • History status: New id, no parents
82
137
  • HL_68897.1
HL_68897.1
  • Basepair signature: cWW-tHH-tSS-tWW-R-R-R-R-R
  • History status: New id, no parents
152
138
  • HL_84285.1
HL_84285.1
  • Basepair signature: cWW-R-tSW-R
  • History status: New id, 1 parent
72
139
  • HL_76062.1
HL_76062.1
  • Basepair signature: cWW-R-R-R-R
  • History status: New id, no parents
72
140
  • HL_92295.1
HL_92295.1
  • Basepair signature: cWW-tSH-tHW-R-R-R-R
  • History status: New id, 1 parent
  • Name: RNase P Structured Hairpin Loop
102
141
  • HL_30273.1
HL_30273.1
  • Basepair signature: cWW-R-R
  • History status: New id, no parents
52
142
  • HL_12525.1
HL_12525.1
  • Basepair signature: cWW-R-R
  • History status: New id, no parents
62
143
  • HL_52248.1
HL_52248.1
  • Basepair signature: cWW-tSH-R
  • History status: New id, 1 parent
  • Name: GNRA-like with 5'-stacking of first unpaired base.
72
144
  • HL_38453.1
HL_38453.1
  • Basepair signature: cWW-cWW-cWW-R-R-R-R-R-R
  • History status: New id, 1 parent
142
145
  • HL_44467.1
HL_44467.1
  • Basepair signature: cWW-R-R-R-R-R
  • History status: Exact match
122
146
  • HL_86256.1
HL_86256.1
  • Basepair signature: cWW-cWW-R
  • History status: New id, 1 parent
92
147
  • HL_08810.1
HL_08810.1
  • Basepair signature: cWW-tSW-R
  • History status: New id, no parents
52
148
  • HL_50880.1
HL_50880.1
  • Basepair signature: cWW-R-R-R-R-R-R-R
  • History status: New id, no parents
102
149
  • HL_16924.1
HL_16924.1
  • Basepair signature: cWW-cWS-R-R
  • History status: New id, no parents
82
150
  • HL_04272.1
HL_04272.1
  • Basepair signature: cWW-R-R-R
  • History status: New id, no parents
72
151
  • HL_39436.1
HL_39436.1
  • Basepair signature: cWW-cWW-tSH-tHS-R-R-R-R-R-R-cWW-R-R-R-R-R
  • History status: New id, no parents
232
152
  • HL_97735.1
HL_97735.1
  • Basepair signature: cWW-cWS
  • History status: New id, 1 parent
92
153
  • HL_68621.1
HL_68621.1
  • Basepair signature: cWW-cWW-R-R
  • History status: New id, no parents
82
154
  • HL_59580.1
HL_59580.1
  • Basepair signature: cWW-R-R-tWH-R-R-R-R
  • History status: New id, no parents
112
155
  • HL_53366.1
HL_53366.1
  • Basepair signature: cWW-cWW-R
  • History status: New id, 1 parent
82
156
  • HL_93109.1
HL_93109.1
  • Basepair signature: cWW-R-R
  • History status: New id, 1 parent
52
157
  • HL_64650.1
HL_64650.1
  • Basepair signature: cWW
  • History status: New id, 1 parent
52
158
  • HL_24456.1
HL_24456.1
  • Basepair signature: cWW-cSW-tSH-R
  • History status: New id, no parents
92
159
  • HL_28338.1
HL_28338.1
  • Basepair signature: cWW-R-R-R-R-R
  • History status: New id, no parents
102
160
  • HL_49210.1
HL_49210.1
  • Basepair signature: cWW-R-R-R-R
  • History status: Exact match
92
161
  • HL_00232.1
HL_00232.1
  • Basepair signature: cWW-R-R-R
  • History status: New id, no parents
62
162
  • HL_00694.1
HL_00694.1
  • Basepair signature: cWW-L-cWW-R-R-R-R-R
  • History status: New id, 1 parent
112
163
  • HL_04673.1
HL_04673.1
  • Basepair signature: cWW-R-R-R
  • History status: New id, no parents
62
164
  • HL_43883.1
HL_43883.1
  • Basepair signature: cWW-R-R-R-R
  • History status: New id, no parents
92
165
  • HL_07891.1
HL_07891.1
  • Basepair signature: cWW-cWW-tSH-R-R
  • History status: New id, no parents
82
166
  • HL_15983.1
HL_15983.1
  • Basepair signature: cWW-R
  • History status: New id, no parents
62
167
  • HL_97425.1
HL_97425.1
  • Basepair signature: cWW-R-cSH-R
  • History status: New id, no parents
62
168
  • HL_49747.1
HL_49747.1
  • Basepair signature: cWW-tSH-R-R-R-R-R-R-R
  • History status: New id, no parents
122
169
  • HL_62545.1
HL_62545.1
  • Basepair signature: cWW
  • History status: New id, no parents
52
170
  • HL_80492.3
HL_80492.3
  • Basepair signature: cWW-tSH-cWS-cWS-R
  • History status: Updated, 1 parent
  • Name: tRNA D-loop
132
171
  • HL_56547.1
HL_56547.1
  • Basepair signature: cWW-R-tSW-cSS-R
  • History status: New id, no parents
102
172
  • HL_89594.1
HL_89594.1
  • Basepair signature: cWW
  • History status: New id, 1 parent
62
173
  • HL_29344.1
HL_29344.1
  • Basepair signature: cWW-R-R-R-R-R-R
  • History status: New id, no parents
112
174
  • HL_98577.1
HL_98577.1
  • Basepair signature: cWW-R-R-tHW-R-R-R-R-R-R-R
  • History status: Exact match
142
175
  • HL_70740.1
HL_70740.1
  • Basepair signature: cWW-R-R-R-R-R-R-R-R
  • History status: New id, 1 parent
112
176
  • HL_46023.1
HL_46023.1
  • Basepair signature: cWW-L-cWW
  • History status: New id, 1 parent
62
177
  • HL_14879.1
HL_14879.1
  • Basepair signature: cWW-tSW-R
  • History status: New id, 1 parent
72
178
  • HL_09322.1
HL_09322.1
  • Basepair signature: cWW-tSH-cWS-tSW-R-R-R
  • History status: New id, 1 parent
  • Name: tRNA D-loop
132
179
  • HL_72226.1
HL_72226.1
  • Basepair signature: cWW
  • History status: New id, 1 parent
  • Name: UNCG-like. cWW Closing pair.
52
180
  • HL_07149.1
HL_07149.1
  • Basepair signature: cWW-tSH-tHS-R-R-tSS-R-R-R-R-R-R-R-R-R-R
  • History status: New id, no parents
212
181
  • HL_05765.1
HL_05765.1
  • Basepair signature: cWW-tWH-R-R-R
  • History status: New id, 1 parent
82
182
  • HL_22971.1
HL_22971.1
  • Basepair signature: cWW-cWW-tSH-R-R-R
  • History status: New id, no parents
102
183
  • HL_25575.1
HL_25575.1
  • Basepair signature: cWW-R-R-R
  • History status: New id, 1 parent
62
184
  • HL_04698.1
HL_04698.1
  • Basepair signature: cWW-R-R-R-R-R-R
  • History status: New id, no parents
92
185
  • HL_95969.2
HL_95969.2
  • Basepair signature: cWW-R-R-R-R
  • History status: Updated, 1 parent
82
186
  • HL_05941.1
HL_05941.1
  • Basepair signature: cWW-cWH-R
  • History status: New id, 1 parent
62
187
  • HL_48629.1
HL_48629.1
  • Basepair signature: cWW-R-R
  • History status: New id, no parents
62
188
  • HL_99019.1
HL_99019.1
  • Basepair signature: cWW-R-tSW
  • History status: New id, no parents
92
189
  • HL_12767.1
HL_12767.1
  • Basepair signature: cWW-R-R-R-R-R-R-R-R-R-R-R-R
  • History status: New id, 1 parent
162
190
  • HL_11386.1
HL_11386.1
  • Basepair signature: cWW-L-cWW-R-R
  • History status: New id, no parents
82
191
  • HL_04973.1
HL_04973.1
  • Basepair signature: cWW-R-tSH-R
  • History status: New id, 1 parent
  • Name: S8 operon binding Hairpin Loop. T-loop like with purine stacking.
82
192
  • HL_34388.1
HL_34388.1
  • Basepair signature: cWW-cWW-R-tWH-R-R-R-R-R
  • History status: New id, 1 parent
132
193
  • HL_55684.2
HL_55684.2
  • Basepair signature: cWW-tSH-R-R
  • History status: Updated, 1 parent
72
194
  • HL_26177.1
HL_26177.1
  • Basepair signature: cWW-R-R-R-R
  • History status: New id, no parents
82
195
  • HL_29212.1
HL_29212.1
  • Basepair signature: cWW-cSH-R-R
  • History status: New id, no parents
92
196
  • HL_13019.1
HL_13019.1
  • Basepair signature: cWW-tSH-R-R-R
  • History status: New id, 1 parent
82
197
  • HL_39765.1
HL_39765.1
  • Basepair signature: cWW-R-R
  • History status: New id, 1 parent
62
198
  • HL_80634.1
HL_80634.1
  • Basepair signature: cWW-cWW-R
  • History status: New id, no parents
82
199
  • HL_08566.1
HL_08566.1
  • Basepair signature: cWW-R-R-R-R
  • History status: New id, no parents
82
200
  • HL_77203.1
HL_77203.1
  • Basepair signature: cWW-R-R
  • History status: New id, no parents
62
201
  • HL_79038.1
HL_79038.1
  • Basepair signature: cWW-R-R
  • History status: Exact match
  • Name: LSU Helix 12 (H12) Hairpin Loop. GNRA-like with altered stacking
61
202
  • HL_14128.1
HL_14128.1
  • Basepair signature: cWW-cWS-R-R-R
  • History status: New id, no parents
121
203
  • HL_00849.1
HL_00849.1
  • Basepair signature: cWW-L-R-R-L-L-cWW-R-R-R-R-R-R-R-R-R-R
  • History status: New id, no parents
211
204
  • HL_93522.1
HL_93522.1
  • Basepair signature: cWW-R-R
  • History status: New id, no parents
71
205
  • HL_85044.1
HL_85044.1
  • Basepair signature: cWW-tSH-R-R-R-R-R-R-R
  • History status: Exact match
  • Name: LSU Helix 10 (H10) Hairpin E.coli
121
206
  • HL_13578.1
HL_13578.1
  • Basepair signature: cWW-R
  • History status: New id, 1 parent
61
207
  • HL_06062.1
HL_06062.1
  • Basepair signature: cWW-R-cWH-R-R-R
  • History status: New id, no parents
91
208
  • HL_65622.1
HL_65622.1
  • Basepair signature: cWW-R-R-R
  • History status: New id, no parents
81
209
  • HL_78946.1
HL_78946.1
  • Basepair signature: cWW-cWW-R-cWS-R-R-R-R
  • History status: New id, no parents
141
210
  • HL_89899.1
HL_89899.1
  • Basepair signature: cWW-R-R-R-R
  • History status: New id, no parents
91
211
  • HL_17687.1
HL_17687.1
  • Basepair signature: cWW-cWW-R-tWH-R-R-R-R
  • History status: New id, no parents
111
212
  • HL_90107.1
HL_90107.1
  • Basepair signature: cWW-R-R-R-R-R
  • History status: New id, no parents
91
213
  • HL_21067.1
HL_21067.1
  • Basepair signature: cWW-R-R-R
  • History status: New id, no parents
61
214
  • HL_41508.1
HL_41508.1
  • Basepair signature: cWW-R-tWH-R-R-R-cSH
  • History status: New id, no parents
121
215
  • HL_01145.1
HL_01145.1
  • Basepair signature: cWW-R-R-R
  • History status: New id, no parents
81
216
  • HL_55579.1
HL_55579.1
  • Basepair signature: cWW-R-R-R-R-R-R
  • History status: New id, no parents
111
217
  • HL_41530.1
HL_41530.1
  • Basepair signature: cWW-R-R-R-R
  • History status: New id, no parents
91
218
  • HL_24427.1
HL_24427.1
  • Basepair signature: cWW-cWW-cWW-bif-cSW-R-R-R-R
  • History status: New id, no parents
151
219
  • HL_03600.1
HL_03600.1
  • Basepair signature: cWW-tSH-tHS-R-R
  • History status: New id, no parents
111
220
  • HL_16938.1
HL_16938.1
  • Basepair signature: cWW-cWW-R-R
  • History status: New id, 1 parent
81
221
  • HL_90862.1
HL_90862.1
  • Basepair signature: cWW-tSH-tHS-tSS-R-R-R-cWW-R-R-R-R-R
  • History status: New id, no parents
191
222
  • HL_85145.1
HL_85145.1
  • Basepair signature: cWW-R-R-R-R-R
  • History status: New id, no parents
91
223
  • HL_73142.1
HL_73142.1
  • Basepair signature: cWW-tHS-R-R
  • History status: New id, no parents
101
224
  • HL_29048.1
HL_29048.1
  • Basepair signature: cWW-cWW-R-R-R-R-R-R-R-R
  • History status: New id, no parents
151
225
  • HL_01158.1
HL_01158.1
  • Basepair signature: cWW-R
  • History status: New id, no parents
91
226
  • HL_96012.1
HL_96012.1
  • Basepair signature: cWW-R-R-R-R-R-R
  • History status: Exact match
101
227
  • HL_94092.1
HL_94092.1
  • Basepair signature: cWW-R-R-R-R-R
  • History status: New id, no parents
91
228
  • HL_77213.1
HL_77213.1
  • Basepair signature: cWW-R-R
  • History status: New id, no parents
61
229
  • HL_09397.1
HL_09397.1
  • Basepair signature: cWW-R-R-R-R
  • History status: New id, no parents
91
230
  • HL_87383.1
HL_87383.1
  • Basepair signature: cWW-tWH-R-tSH-R
  • History status: New id, no parents
101
231
  • HL_54411.1
HL_54411.1
  • Basepair signature: cWW-cWH-R-R-R-R-R
  • History status: New id, no parents
101
232
  • HL_35996.1
HL_35996.1
  • Basepair signature: cWW-cSW-R-R-R
  • History status: New id, no parents
91
233
  • HL_24567.1
HL_24567.1
  • Basepair signature: cWW-tSW-R
  • History status: New id, no parents
61
234
  • HL_62374.1
HL_62374.1
  • Basepair signature: cWW-cSS-cSS-R-R-R-R-R-R-R-R-R-R-R-R-R
  • History status: Exact match
201
235
  • HL_71900.1
HL_71900.1
  • Basepair signature: cWW-R-R-R-R-R-R-R-R
  • History status: New id, no parents
121
236
  • HL_10715.1
HL_10715.1
  • Basepair signature: cWW-R-R-R-R-R-R-R
  • History status: New id, no parents
121
237
  • HL_93647.1
HL_93647.1
  • Basepair signature: cWW-R-R-R
  • History status: New id, no parents
61
238
  • HL_15553.1
HL_15553.1
  • Basepair signature: cWW-bif-R-cWW-R
  • History status: New id, no parents
81
239
  • HL_30731.1
HL_30731.1
  • Basepair signature: cWW-R
  • History status: Exact match
71
240
  • HL_71320.1
HL_71320.1
  • Basepair signature: cWW-R-R-R
  • History status: New id, no parents
71
241
  • HL_70531.1
HL_70531.1
  • Basepair signature: cWW-R-R-R-R-R
  • History status: New id, no parents
81
242
  • HL_77438.1
HL_77438.1
  • Basepair signature: cWW-R-R-tWH-R-R-R
  • History status: New id, no parents
91
243
  • HL_04288.1
HL_04288.1
  • Basepair signature: cWW
  • History status: New id, no parents
61
244
  • HL_14293.1
HL_14293.1
  • Basepair signature: cWW-L-R-cWW-R-tSH-tWW-R-cHW-R
  • History status: New id, no parents
171
245
  • HL_76276.1
HL_76276.1
  • Basepair signature: cWW-R-R-R-R-R-R-R
  • History status: New id, no parents
121
246
  • HL_23080.1
HL_23080.1
  • Basepair signature: cWW-R-R-R
  • History status: Exact match
81
247
  • HL_35165.1
HL_35165.1
  • Basepair signature: cWW-R-R-R-R
  • History status: New id, no parents
71
248
  • HL_15316.1
HL_15316.1
  • Basepair signature: cWW-cWW-R-R-R-R-R
  • History status: New id, no parents
101
249
  • HL_21187.1
HL_21187.1
  • Basepair signature: cWW-R-R-R-R-R
  • History status: New id, no parents
101
250
  • HL_73228.1
HL_73228.1
  • Basepair signature: cWW-cWW-R-R-R-R-R-R
  • History status: New id, no parents
131
251
  • HL_97104.1
HL_97104.1
  • Basepair signature: cWW-cSW-R-R-R-R-R-R-R-R-R
  • History status: New id, no parents
151
252
  • HL_37526.1
HL_37526.1
  • Basepair signature: cWW-R-R-R
  • History status: New id, no parents
61
253
  • HL_63203.1
HL_63203.1
  • Basepair signature: cWW-tWW-R-R-R
  • History status: New id, no parents
101
254
  • HL_95745.1
HL_95745.1
  • Basepair signature: cWW-R-R-R
  • History status: New id, no parents
61
255
  • HL_25783.1
HL_25783.1
  • Basepair signature: cWW-cWW-L-R-R-cWW-R-R-R-R-R-R-R-R-R-R-R-R-R
  • History status: New id, no parents
261
256
  • HL_01005.1
HL_01005.1
  • Basepair signature: cWW-cWH-R-cSH
  • History status: New id, no parents
81
257
  • HL_47219.1
HL_47219.1
  • Basepair signature: cWW-R-tSH-tHS-R-R-R-R-R-R-R-R-R-R
  • History status: New id, no parents
191
258
  • HL_20028.1
HL_20028.1
  • Basepair signature: cWW-R-R-R-R-R
  • History status: Exact match
111
259
  • HL_79992.1
HL_79992.1
  • Basepair signature: cWW-tWH-R-R-R-R-R-R
  • History status: New id, no parents
121
260
  • HL_44914.1
HL_44914.1
  • Basepair signature: cWW-R-R-R
  • History status: New id, no parents
111
261
  • HL_85081.1
HL_85081.1
  • Basepair signature: cWW-R-R-R-R-R
  • History status: New id, no parents
111
262
  • HL_62809.1
HL_62809.1
  • Basepair signature: cWW-R-R-R-R-R-R-R-R-R-R-R-R-R-R-R-R-R-R-R-R-R-R-R-R-R-R-R
  • History status: New id, no parents
321
263
  • HL_38898.1
HL_38898.1
  • Basepair signature: cWW-R-R-R-R-R
  • History status: Exact match
101
264
  • HL_30063.1
HL_30063.1
  • Basepair signature: cWW-R-R-R-R-R-R-R-R
  • History status: New id, 1 parent
  • Name: 16S helix 23 and 24 hairpin loops
111
265
  • HL_72137.1
HL_72137.1
  • Basepair signature: cWW-R-R-R-R-R-R-R
  • History status: New id, no parents
121
266
  • HL_24133.1
HL_24133.1
  • Basepair signature: cWW-cWS-R-R
  • History status: New id, 1 parent
  • Name: tRNA D-loop
101
267
  • HL_72389.1
HL_72389.1
  • Basepair signature: cWW-R-R-R-R-R-R
  • History status: Exact match
91
268
  • HL_00061.1
HL_00061.1
  • Basepair signature: cWW-tSH-R-R-R-R-R
  • History status: New id, no parents
111
269
  • HL_67225.1
HL_67225.1
  • Basepair signature: cWW-tSH-tSH-R-R
  • History status: New id, no parents
91
270
  • HL_11362.1
HL_11362.1
  • Basepair signature: cWW-R-R-R-R
  • History status: New id, no parents
81
271
  • HL_16817.1
HL_16817.1
  • Basepair signature: cWW-R-R-R-R-R-R
  • History status: New id, no parents
91
272
  • HL_85937.1
HL_85937.1
  • Basepair signature: cWW-cWW-R-tSH-tWH-R-tHW-R-R-R-R
  • History status: New id, no parents
181
273
  • HL_86393.1
HL_86393.1
  • Basepair signature: cWW-R-R-R-R-R-R-R-R
  • History status: New id, no parents
121
274
  • HL_70597.1
HL_70597.1
  • Basepair signature: cWW-R
  • History status: New id, no parents
61
275
  • HL_43289.1
HL_43289.1
  • Basepair signature: cWW-R-cSH-R-R-R-R-R-R
  • History status: New id, no parents
121
276
  • HL_00724.1
HL_00724.1
  • Basepair signature: cWW-R-R
  • History status: New id, no parents
61
277
  • HL_82887.1
HL_82887.1
  • Basepair signature: cWW-R-R-R-R-R
  • History status: New id, no parents
91
278
  • HL_57217.1
HL_57217.1
  • Basepair signature: cWW-R-R-R-cSH
  • History status: Exact match
  • Name: cHS platform Intercalation Site
91
279
  • HL_49429.1
HL_49429.1
  • Basepair signature: cWW-cWW-R-cSS-cSS-R-R-R-R
  • History status: New id, no parents
161
280
  • HL_52914.1
HL_52914.1
  • Basepair signature: cWW-R-tSH-R-R
  • History status: New id, no parents
81
281
  • HL_22286.1
HL_22286.1
  • Basepair signature: cWW-cWH
  • History status: New id, no parents
51
282
  • HL_81973.1
HL_81973.1
  • Basepair signature: cWW
  • History status: New id, no parents
71
283
  • HL_17008.1
HL_17008.1
  • Basepair signature: cWW-R-R-R-tSW-R-R
  • History status: Exact match
  • Name: Nova-2 KH3 domain binding hairpin
141
284
  • HL_16418.1
HL_16418.1
  • Basepair signature: cWW-tSH-tSH-R-R-R-R-R-R-R-R-R-R
  • History status: New id, no parents
171
285
  • HL_98415.1
HL_98415.1
  • Basepair signature: cWW-R-R
  • History status: New id, no parents
61
286
  • HL_01413.1
HL_01413.1
  • Basepair signature: cWW-cWW
  • History status: New id, no parents
71
287
  • HL_48787.1
HL_48787.1
  • Basepair signature: cWW-cWW-tWW-cWH-cSH-cSS-L-L-tHS-R-R-R-cSH-L-cWW-R-R-R-R-R-R-tSH-R-R-R-R
  • History status: New id, no parents
381
288
  • HL_23479.1
HL_23479.1
  • Basepair signature: cWW-R-R
  • History status: New id, no parents
61
289
  • HL_77064.1
HL_77064.1
  • Basepair signature: cWW-tSH-tHH-R-R-R-R-R
  • History status: New id, no parents
111
290
  • HL_97766.1
HL_97766.1
  • Basepair signature: cWW-cWH-R-R-R-R-R-R-R
  • History status: New id, no parents
141
291
  • HL_05113.1
HL_05113.1
  • Basepair signature: cWW-R-R-R-R
  • History status: Exact match
111
292
  • HL_21773.1
HL_21773.1
  • Basepair signature: cWW-cWW-cWH-R
  • History status: New id, no parents
91
293
  • HL_68396.1
HL_68396.1
  • Basepair signature: cWW-R
  • History status: New id, no parents
71
294
  • HL_03642.1
HL_03642.1
  • Basepair signature: cWW-R-R-R-R-R-R-R
  • History status: New id, no parents
101
295
  • HL_26476.1
HL_26476.1
  • Basepair signature: cWW-cSW-R-R-R-R-R-R-R-R
  • History status: New id, no parents
171
296
  • HL_05157.1
HL_05157.1
  • Basepair signature: cWW-R-R
  • History status: New id, no parents
81
297
  • HL_39469.1
HL_39469.1
  • Basepair signature: cWW-cSW-R-R-cWW
  • History status: New id, no parents
91
298
  • HL_03511.1
HL_03511.1
  • Basepair signature: cWW-R-R-R-tWH-R-R
  • History status: New id, no parents
111
299
  • HL_91613.1
HL_91613.1
  • Basepair signature: cWW-cWW-cWW-R-R-R
  • History status: Exact match
111
300
  • HL_99584.1
HL_99584.1
  • Basepair signature: cWW-R
  • History status: Exact match
51
301
  • HL_73581.1
HL_73581.1
  • Basepair signature: cWW-tSW-R
  • History status: New id, no parents
61
302
  • HL_98240.1
HL_98240.1
  • Basepair signature: cWW-tSS-R-R
  • History status: New id, no parents
91
303
  • HL_96535.1
HL_96535.1
  • Basepair signature: cWW-cWW
  • History status: New id, no parents
71
304
  • HL_00806.1
HL_00806.1
  • Basepair signature: cWW-R
  • History status: New id, no parents
61
305
  • HL_38841.1
HL_38841.1
  • Basepair signature: cWW-R-R-R-R-R-R-R-R-R-R
  • History status: New id, no parents
141
306
  • HL_77692.1
HL_77692.1
  • Basepair signature: cWW-tSH-cWS-cSH-R-R
  • History status: Exact match
  • Name: tRNA D-loop
111
307
  • HL_64161.1
HL_64161.1
  • Basepair signature: cWW-R-R-R-R
  • History status: New id, no parents
91
308
  • HL_64206.1
HL_64206.1
  • Basepair signature: cWW-R-R-R
  • History status: New id, no parents
91
309
  • HL_51972.1
HL_51972.1
  • Basepair signature: cWW-R-R
  • History status: New id, no parents
71
310
  • HL_96239.1
HL_96239.1
  • Basepair signature: cWW-R-R-R-R-R-R-R-R-R
  • History status: New id, no parents
141
311
  • HL_88830.1
HL_88830.1
  • Basepair signature: cWW-tSW-cWH-cHW-cHW-cWH-cHW-cWH-R-cWH-cWH-cWH-cWH
  • History status: New id, no parents
221
312
  • HL_71145.1
HL_71145.1
  • Basepair signature: cWW-tSH-cWS-tSW-R-R-R-R-R
  • History status: New id, 1 parent
  • Name: tRNA D-loop
151
313
  • HL_17554.1
HL_17554.1
  • Basepair signature: cWW-R-cHH-tSW-tSH-R
  • History status: New id, no parents
121
314
  • HL_81880.1
HL_81880.1
  • Basepair signature: cWW-cWW-R-R-R-R-R-R
  • History status: New id, no parents
121
315
  • HL_01938.1
HL_01938.1
  • Basepair signature: cWW-R-R-R-R-R-R-cSH
  • History status: New id, 1 parent
121
316
  • HL_01569.1
HL_01569.1
  • Basepair signature: cWW-cWW-L-R-cSS-cWW
  • History status: New id, no parents
101
317
  • HL_97014.1
HL_97014.1
  • Basepair signature: cWW-tSH-cWS-cWS-R-R-R
  • History status: New id, no parents
131
318
  • HL_37955.1
HL_37955.1
  • Basepair signature: cWW-cWW-cWW-L-R-cWW-cWW-R-R-R-R-R-R-R-R-R-R-R
  • History status: New id, no parents
251
319
  • HL_20432.1
HL_20432.1
  • Basepair signature: cWW-R-R-R
  • History status: New id, no parents
91
320
  • HL_29148.1
HL_29148.1
  • Basepair signature: cWW-R-R-R-cSS-R-cSW-R-R-R-R-R
  • History status: New id, no parents
171
321
  • HL_71413.1
HL_71413.1
  • Basepair signature: cWW-R-R-R-R-R-R
  • History status: New id, 1 parent
  • Name: cHS GU/cWS Double Platform creates Intercalation site
101
322
  • HL_08203.1
HL_08203.1
  • Basepair signature: cWW-cWW-tWH-tHH-R
  • History status: Exact match
131
323
  • HL_92745.1
HL_92745.1
  • Basepair signature: cWW-tSH-R-R
  • History status: New id, no parents
81
324
  • HL_20963.1
HL_20963.1
  • Basepair signature: cWW-R-R-R-R-R-R-R-R-R-R-R-R
  • History status: New id, no parents
181
325
  • HL_23944.1
HL_23944.1
  • Basepair signature: cWW-R-R-R-R-R-R-R-R
  • History status: New id, no parents
131
326
  • HL_17381.1
HL_17381.1
  • Basepair signature: cWW-R-R-R
  • History status: New id, no parents
81
327
  • HL_45358.1
HL_45358.1
  • Basepair signature: cWW-R-R-R-R-tHW-R-R-R-R-R
  • History status: Exact match
  • Name: Double hairpin loop based on GGA triple
131
328
  • HL_28244.1
HL_28244.1
  • Basepair signature: cWW
  • History status: New id, no parents
41
329
  • HL_59511.1
HL_59511.1
  • Basepair signature: cWW-R-R-R-R-R-R-R-R-R-R
  • History status: New id, no parents
131
330
  • HL_65157.1
HL_65157.1
  • Basepair signature: cWW-R-R-R
  • History status: New id, 1 parent
91
331
  • HL_19791.1
HL_19791.1
  • Basepair signature: cWW-cWW-R-R-R-R
  • History status: New id, no parents
131
332
  • HL_55428.1
HL_55428.1
  • Basepair signature: cWW-tSW-R-cWH-cHW-cHW-cWH-cHW-cWH-R-cWH-cWH-cWH-cWH-R
  • History status: New id, no parents
221
333
  • HL_74418.1
HL_74418.1
  • Basepair signature: cWW-R-R-R-R
  • History status: New id, 1 parent
  • Name: LSU Helix 22 (H22) Hairpin Loop. Forms Pseudknot.
91
334
  • HL_42716.1
HL_42716.1
  • Basepair signature: cWW-R-R-R-R-R-R
  • History status: New id, no parents
91
335
  • HL_15934.1
HL_15934.1
  • Basepair signature: cWW-R-R-R-R-R-R-R
  • History status: New id, no parents
101
336
  • HL_06318.1
HL_06318.1
  • Basepair signature: cWW-cSH-tSS-R-R
  • History status: New id, no parents
101
337
  • HL_17244.1
HL_17244.1
  • Basepair signature: cWW-tWH-R-tWW-R-R-R-R
  • History status: New id, no parents
111
338
  • HL_97865.1
HL_97865.1
  • Basepair signature: cWW-cWW-R-R-R-R-R
  • History status: New id, no parents
101
339
  • HL_65557.1
HL_65557.1
  • Basepair signature: cWW-R-cWW-R-R-R-R-R-cWH
  • History status: New id, no parents
151
340
  • HL_93910.1
HL_93910.1
  • Basepair signature: cWW-R-R-R-R-R-R
  • History status: New id, no parents
121
341
  • HL_75236.1
HL_75236.1
  • Basepair signature: cWW-tSH-R-R-R-R
  • History status: New id, no parents
91
342
  • HL_30008.1
HL_30008.1
  • Basepair signature: cWW-R-R
  • History status: Exact match
51
343
  • HL_35255.1
HL_35255.1
  • Basepair signature: cWW-R-R-R-R-R-R
  • History status: New id, no parents
101
344
  • HL_67264.1
HL_67264.1
  • Basepair signature: cWW-cSW-R-R-R-R
  • History status: New id, no parents
81
345
  • HL_03996.1
HL_03996.1
  • Basepair signature: cWW-R-R-R
  • History status: New id, no parents
81
346
  • HL_46507.1
HL_46507.1
  • Basepair signature: cWW-tSH-R-R
  • History status: New id, no parents
71
347
  • HL_73972.1
HL_73972.1
  • Basepair signature: cWW-bif-tSW
  • History status: Exact match
91
348
  • HL_12635.1
HL_12635.1
  • Basepair signature: cWW-R-R-tSH-R-R
  • History status: New id, no parents
101
349
  • HL_33971.1
HL_33971.1
  • Basepair signature: cWW-R
  • History status: New id, no parents
51
350
  • HL_57735.1
HL_57735.1
  • Basepair signature: cWW-R-R-R
  • History status: New id, no parents
61
351
  • HL_11257.1
HL_11257.1
  • Basepair signature: cWW-cSW-R-R-R
  • History status: Exact match
71
352
  • HL_42255.1
HL_42255.1
  • Basepair signature: cWW-R-R-cSH
  • History status: Exact match
81
353
  • HL_18595.1
HL_18595.1
  • Basepair signature: cWW-L-R-R-cWW-R-cWW-cWW-R-R-R
  • History status: New id, no parents
161
354
  • HL_81734.1
HL_81734.1
  • Basepair signature: cWW-R-R
  • History status: New id, no parents
101
355
  • HL_95289.1
HL_95289.1
  • Basepair signature: cWW-tSH-R-cWS-R-R-R
  • History status: New id, 1 parent
131
356
  • HL_78306.1
HL_78306.1
  • Basepair signature: cWW-R-R-R-R-R-cWH-R-R-R-R-R-R-R-R
  • History status: New id, no parents
241
357
  • HL_98233.1
HL_98233.1
  • Basepair signature: cWW-R-R-R-R-R
  • History status: Exact match
91
358
  • HL_16959.1
HL_16959.1
  • Basepair signature: cWW-R-R-R-R-R-R
  • History status: Exact match
101
359
  • HL_61454.1
HL_61454.1
  • Basepair signature: cWW
  • History status: New id, no parents
51
360
  • HL_39776.1
HL_39776.1
  • Basepair signature: cWW-R-bif-R-R-R-R-R-R-R-R-R-R-R
  • History status: New id, no parents
161
361
  • HL_87223.1
HL_87223.1
  • Basepair signature: cWW-R-R-R-R
  • History status: Exact match
81
362
  • HL_13475.1
HL_13475.1
  • Basepair signature: cWW-R-tSW-R-R
  • History status: New id, no parents
81
363
  • HL_42345.1
HL_42345.1
  • Basepair signature: cWW-R-R-R-R
  • History status: Exact match
81
364
  • HL_11415.1
HL_11415.1
  • Basepair signature: cWW-R-R
  • History status: New id, no parents
61
365
  • HL_06941.1
HL_06941.1
  • Basepair signature: cWW-R-R-R-R-R-R-R
  • History status: New id, no parents
111
366
  • HL_98861.1
HL_98861.1
  • Basepair signature: cWW-R
  • History status: New id, no parents
61
367
  • HL_07386.1
HL_07386.1
  • Basepair signature: cWW-R-R-R-R
  • History status: New id, no parents
71
368
  • HL_78422.1
HL_78422.1
  • Basepair signature: cWW-R-R-R-R-R-R-R
  • History status: Exact match
  • Name: SSU Central Pseudoknot (forms helix 2)
101
369
  • HL_43172.1
HL_43172.1
  • Basepair signature: cWW-R-R-R-R
  • History status: New id, no parents
91
370
  • HL_31461.1
HL_31461.1
  • Basepair signature: cWW-cWS-R
  • History status: New id, no parents
61
371
  • HL_72162.1
HL_72162.1
  • Basepair signature: cWW-cSS-R-R-R-cSS-R-R
  • History status: New id, no parents
131
372
  • HL_25712.1
HL_25712.1
  • Basepair signature: cWW-R-R
  • History status: New id, no parents
71
373
  • HL_03478.1
HL_03478.1
  • Basepair signature: cWW-R-R-R-R-R
  • History status: New id, 1 parent
  • Name: cSH AA Platform containing Hairpin Loop
91
374
  • HL_83924.1
HL_83924.1
  • Basepair signature: cWW-R-R-R-R-R-R-R-R
  • History status: New id, no parents
131
375
  • HL_88357.1
HL_88357.1
  • Basepair signature: cWW-tWH-R-R
  • History status: New id, no parents
71
376
  • HL_92991.1
HL_92991.1
  • Basepair signature: cWW-R-R-R-R
  • History status: New id, no parents
71
377
  • HL_33707.1
HL_33707.1
  • Basepair signature: cWW-R-R-R-R-R
  • History status: New id, no parents
91
378
  • HL_21839.1
HL_21839.1
  • Basepair signature: cWW-cSW-R-R-R-R-R-R-R
  • History status: Exact match
111
379
  • HL_25572.1
HL_25572.1
  • Basepair signature: cWW-R-cSW-R-R-R-R-R-R-R
  • History status: New id, 1 parent
131
380
  • HL_18706.1
HL_18706.1
  • Basepair signature: cWW
  • History status: New id, no parents
61
381
  • HL_18721.1
HL_18721.1
  • Basepair signature: cWW-cWW-R-cSW-R-cSH
  • History status: New id, no parents
111
382
  • HL_55450.1
HL_55450.1
  • Basepair signature: cWW-R-R-R
  • History status: Exact match
71
383
  • HL_63819.1
HL_63819.1
  • Basepair signature: cWW-cSH-bif-R-R-R-R-R-tSH-R-R-R-R-R-R-R
  • History status: New id, no parents
191
384
  • HL_20630.1
HL_20630.1
  • Basepair signature: cWW-R-R
  • History status: New id, no parents
71
385
  • HL_87305.1
HL_87305.1
  • Basepair signature: cWW-tHW-R-R-R-R-R-R-R-R-R-R
  • History status: New id, 1 parent
  • Name: Kissing Hairpin from di-GMP-II riboswitch
161
386
  • HL_65299.1
HL_65299.1
  • Basepair signature: cWW-R-R
  • History status: New id, no parents
61
387
  • HL_60168.1
HL_60168.1
  • Basepair signature: cWW-R-R-R
  • History status: New id, no parents
71
388
  • HL_64221.1
HL_64221.1
  • Basepair signature: cWW-cSH-cWW-R-R-tSH-R-R-R-R-R
  • History status: New id, no parents
161
389
  • HL_14388.1
HL_14388.1
  • Basepair signature: cWW-cWW-R-cSH-R
  • History status: New id, no parents
91
390
  • HL_03127.1
HL_03127.1
  • Basepair signature: cWW-cWW-R-R-R-R
  • History status: New id, no parents
91
391
  • HL_96296.1
HL_96296.1
  • Basepair signature: cWW-R-R-R-R-R-R-R-R-R-R
  • History status: New id, no parents
141
392
  • HL_91347.1
HL_91347.1
  • Basepair signature: cWW-R-R-R-R-R
  • History status: New id, no parents
101
393
  • HL_07245.1
HL_07245.1
  • Basepair signature: cWW-R-R-R-R-cSS-R-R-R
  • History status: New id, no parents
121
394
  • HL_98774.1
HL_98774.1
  • Basepair signature: cWW-R-R
  • History status: New id, no parents
61
395
  • HL_99779.1
HL_99779.1
  • Basepair signature: cWW-R-R
  • History status: Exact match
71
396
  • HL_72191.1
HL_72191.1
  • Basepair signature: cWW-bif-R-R-R-R
  • History status: New id, no parents
91
397
  • HL_87051.1
HL_87051.1
  • Basepair signature: cWW-R-R-R-R-R
  • History status: New id, no parents
81
398
  • HL_83609.1
HL_83609.1
  • Basepair signature: cWW-R-R-R-R
  • History status: Exact match
81
399
  • HL_74049.1
HL_74049.1
  • Basepair signature: cWW-cWW-R-cWS-R-R-R-R-R
  • History status: New id, no parents
151
400
  • HL_39911.1
HL_39911.1
  • Basepair signature: cWW-cWW-R-R-R-R-R
  • History status: New id, no parents
121
401
  • HL_41333.1
HL_41333.1
  • Basepair signature: cWW-bif-cWW-cWW-R-R-R-R-R-R-R-R-R-R
  • History status: New id, no parents
171
402
  • HL_00721.1
HL_00721.1
  • Basepair signature: cWW
  • History status: Exact match
61
403
  • HL_66880.1
HL_66880.1
  • Basepair signature: cWW-R-R-R-R-R-R-R-R
  • History status: Exact match
121
404
  • HL_31108.1
HL_31108.1
  • Basepair signature: cWW-R
  • History status: New id, no parents
41
405
  • HL_09334.1
HL_09334.1
  • Basepair signature: cWW-tSW
  • History status: New id, no parents
71
406
  • HL_41200.1
HL_41200.1
  • Basepair signature: cWW-R-bif-cWH-tSH-tWH-R-tHW-tHH-R-R
  • History status: New id, no parents
191
407
  • HL_75842.1
HL_75842.1
  • Basepair signature: cWW-R-R-R-R-R-R-R-R-R-R-R-R-R-R-R-R-R-R-R-R-R-R-R-R-R
  • History status: New id, no parents
301
408
  • HL_66907.1
HL_66907.1
  • Basepair signature: cWW-R-R-R-R-R-R-R-R
  • History status: New id, no parents
131
409
  • HL_57923.1
HL_57923.1
  • Basepair signature: cWW-cWW-R-R
  • History status: Exact match
91
410
  • HL_27488.1
HL_27488.1
  • Basepair signature: cWW-tWH-R-R-R
  • History status: New id, no parents
81
411
  • HL_27648.1
HL_27648.1
  • Basepair signature: cWW-cSH-R-R
  • History status: New id, no parents
101
412
  • HL_11142.1
HL_11142.1
  • Basepair signature: cWW-tWW-R-R-R-R-R-R
  • History status: New id, no parents
111
413
  • HL_04708.1
HL_04708.1
  • Basepair signature: cWW-cWW-cSH-R-R
  • History status: New id, no parents
111
414
  • HL_45397.1
HL_45397.1
  • Basepair signature: cWW-R-R
  • History status: New id, no parents
61



New id, no parents 243; New id, 1 parent 119; Exact match 37; New id, 2 parents 10; Updated, 1 parent 5;