Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
HL_4V64_0011/AA/12:22No text annotation
Not in a motif group
homologous
HL_4LFB_001
HL_89881.2
HL_4V64_0021/AA/83:86No text annotation
Not in a motif group
HL_4V64_0031/AA/158:163GNRA
Not in a motif group
homologous
HL_5J7L_003
HL_35490.2
HL_4V64_0041/AA/186:191GNRA
Not in a motif group
homologous
HL_5J7L_004
HL_35490.2
HL_4V64_0051/AA/207:212UNCG
Not in a motif group
homologous
HL_5J7L_005
HL_03562.2
HL_4V64_0061/AA/259:267No text annotation
Not in a motif group
homologous
HL_5J7L_006
HL_69023.2
HL_4V64_0071/AA/296:301GNRA
Not in a motif group
homologous
HL_5J7L_007
HL_35490.2
HL_4V64_0081/AA/320:333No text annotation
Not in a motif group
homologous
HL_5J7L_008
HL_81205.2
HL_4V64_0091/AA/342:347UNCG
Not in a motif group
homologous
HL_5J7L_009
HL_03562.2
HL_4V64_0101/AA/379:384GNRA
Not in a motif group
homologous
HL_5J7L_010
HL_35490.2
HL_4V64_0111/AA/419:424UNCG
Not in a motif group
homologous
HL_5J7L_011
HL_03562.2
HL_4V64_0121/AA/462:470No text annotation
Not in a motif group
HL_4V64_0131/AA/522:527No text annotation
Not in a motif group
geometric
HL_5J7L_143
HL_70546.1
HL_4V64_0141/AA/617:623No text annotation
Not in a motif group
homologous
HL_5J7L_014
HL_26881.3
HL_4V64_0151/AA/689:698No text annotation
Not in a motif group
homologous
HL_5J7L_015
HL_12326.1
HL_4V64_0161/AA/726:731Other HL
Not in a motif group
homologous
HL_5J7L_016
HL_87030.2
HL_4V64_0171/AA/786:796No text annotation
Not in a motif group
homologous
HL_4LFB_017
HL_12326.1
HL_4V64_0181/AA/840:846No text annotation
Not in a motif group
HL_4V64_0191/AA/862:867GNRA
Not in a motif group
homologous
HL_4LFB_019
HL_35490.2
HL_4V64_0201/AA/897:902GNRA
Not in a motif group
homologous
HL_4LFB_020
HL_35490.2
HL_4V64_0211/AA/963:972No text annotation
Not in a motif group
homologous
HL_5J7L_021
NA
HL_4V64_0221/AA/1012:1017GNRA
Not in a motif group
homologous
HL_4LFB_022
HL_35490.2
HL_4V64_0231/AA/1028:1033No text annotation
Not in a motif group
geometric
HL_4YAZ_004
HL_91104.1
HL_4V64_0241/AA/1076:1081GNRA
Not in a motif group
homologous
HL_5J7L_023
HL_35490.2
HL_4V64_0251/AA/1089:1096No text annotation
Not in a motif group
homologous
HL_4LFB_025
HL_71554.2
HL_4V64_0261/AA/1134:1140No text annotation
Not in a motif group
homologous
HL_4LFB_026
HL_03562.2
HL_4V64_0271/AA/1165:1171GNRA
Not in a motif group
homologous
HL_4LFB_027
HL_35490.2
HL_4V64_0281/AA/1265:1270Other HL
Not in a motif group
homologous
HL_4LFB_028
HL_35490.2
HL_4V64_0291/AA/1314:1323No text annotation
Not in a motif group
homologous
HL_4LFB_029
HL_41998.1
HL_4V64_0301/AA/1356:1366No text annotation
Not in a motif group
homologous
HL_4LFB_030
HL_96366.1
HL_4V64_0311/AA/1449:1454UNCG
Not in a motif group
homologous
HL_4LFB_031
HL_03562.2
HL_4V64_0321/AA/1515:1520No text annotation
Not in a motif group
homologous
HL_4LFB_032
NA
HL_4V64_0331/BA/38:44No text annotation
Not in a motif group
homologous
HL_5J7L_203
HL_87939.2
HL_4V64_0341/BA/86:90No text annotation
Not in a motif group
homologous
HL_5J7L_204
HL_38927.5
HL_4V64_0351/BB/59:68No text annotation
Not in a motif group
homologous
HL_7RQB_001
HL_99167.2
HL_4V64_0361/BB/87:95No text annotation
Not in a motif group
homologous
HL_5J7L_135
HL_03186.1
HL_4V64_0371/BB/123:128No text annotation
Not in a motif group
homologous
HL_5J7L_136
HL_70546.1
HL_4V64_0381/BB/137:142No text annotation
Not in a motif group
HL_4V64_0391/BB/158:168No text annotation
Not in a motif group
homologous
HL_5J7L_138
HL_81820.1
HL_4V64_0401/BB/194:201No text annotation
Not in a motif group
geometric
HL_5J7L_139
HL_06192.2
HL_4V64_0411/BB/225:230No text annotation
Not in a motif group
homologous
HL_5J7L_140
HL_56241.1
HL_4V64_0421/BB/246:252No text annotation
Not in a motif group
homologous
HL_5J7L_141
HL_67216.7
HL_4V64_0431/BB/305:312T-loop with 1 bulged base
Not in a motif group
homologous
HL_5J7L_142
HL_41998.1
HL_4V64_0441/BB/319:323No text annotation
Not in a motif group
homologous
HL_5J7L_143
HL_70546.1
HL_4V64_0451/BB/327:335No text annotation
Not in a motif group
homologous
HL_5J7L_144
HL_08002.9
HL_4V64_0461/BB/382:392No text annotation
Not in a motif group
homologous
HL_5J7L_145
HL_91503.4
HL_4V64_0471/BB/410:417No text annotation
Not in a motif group
homologous
HL_5J7L_146
HL_96598.1
HL_4V64_0481/BB/462:467GNRA
Not in a motif group
homologous
HL_4WF9_015
HL_35490.2
HL_4V64_0491/BB/487:493No text annotation
Not in a motif group
homologous
HL_5J7L_148
HL_35490.2
HL_4V64_0501/BB/543:550No text annotation
Not in a motif group
homologous
HL_7RQB_017
NA
HL_4V64_0511/BB/566:575T-loop with 2 stacked bulged bases
Not in a motif group
homologous
HL_5J7L_150
HL_41998.1
HL_4V64_0521/BB/611:617No text annotation
Not in a motif group
homologous
HL_5J7L_151
HL_90617.3
HL_4V64_0531/BB/629:634GNRA
Not in a motif group
homologous
HL_5J7L_152
HL_35490.2
HL_4V64_0541/BB/641:647No text annotation
Not in a motif group
homologous
HL_7RQB_021
HL_35490.2
HL_4V64_0551/BB/712:719No text annotation
Not in a motif group
homologous
HL_5J7L_154
HL_84085.2
HL_4V64_0561/BB/744:753No text annotation
Not in a motif group
homologous
HL_4WF9_023
HL_39334.6
HL_4V64_0571/BB/779:785No text annotation
Not in a motif group
HL_4V64_0581/BB/826:831No text annotation
Not in a motif group
homologous
HL_7RQB_025
HL_53619.1
HL_4V64_0601/BB/955:962GNRA
Not in a motif group
homologous
HL_4WF9_027
HL_35490.2
HL_4V64_0611/BB/978:985No text annotation
Not in a motif group
homologous
HL_7A0S_027
HL_64430.2
HL_4V64_0621/BB/1064:1074No text annotation
Not in a motif group
homologous
HL_6PRV_001
HL_07145.2
HL_4V64_0631/BB/1092:1099No text annotation
Not in a motif group
homologous
HL_6PRV_002
HL_84085.2
HL_4V64_0641/BB/1172:1177No text annotation
Not in a motif group
geometric
HL_4WF9_003
HL_70546.1
HL_4V64_0651/BB/1222:1227Other HL
Not in a motif group
homologous
HL_5J7L_164
HL_87030.2
HL_4V64_0661/BB/1281:1289T-loop with 2 stacked bulged bases
Not in a motif group
homologous
HL_5J7L_165
HL_41998.1
HL_4V64_0671/BB/1324:1330No text annotation
Not in a motif group
homologous
HL_5J7L_166
HL_46680.1
HL_4V64_0681/BB/1363:1368Other HL
Not in a motif group
homologous
HL_5J7L_167
HL_87030.2
HL_4V64_0691/BB/1389:1398No text annotation
Not in a motif group
homologous
HL_5J7L_168
HL_69023.2
HL_4V64_0701/BB/1449:1462No text annotation
Not in a motif group
HL_4V64_0711/BB/1492:1498No text annotation
Not in a motif group
homologous
HL_5J7L_170
HL_46680.1
HL_4V64_0721/BB/1533:1538UNCG
Not in a motif group
homologous
HL_5J7L_171
HL_03562.2
HL_4V64_0731/BB/1565:1568No text annotation
Not in a motif group
homologous
HL_5J7L_172
HL_38927.5
HL_4V64_0741/BB/1612:1619No text annotation
Not in a motif group
homologous
HL_7RQB_040
HL_64430.2
HL_4V64_0751/BB/1630:1636GNRA with one bulged base
Not in a motif group
homologous
HL_5J7L_174
HL_35490.2
HL_4V64_0761/BB/1691:1696UNCG
Not in a motif group
geometric
HL_4LFB_011
HL_03562.2
HL_4V64_0771/BB/1728:1731No text annotation
Not in a motif group
HL_4V64_0781/BB/1752:1756No text annotation
Not in a motif group
homologous
HL_7RQB_044
HL_76539.5
HL_4V64_0791/BB/1777:1787No text annotation
Not in a motif group
homologous
HL_4WF9_043
HL_43613.5
HL_4V64_0801/BB/1806:1811No text annotation
Not in a motif group
homologous
HL_5J7L_179
HL_35490.2
HL_4V64_0811/BB/1868:1873Other HL
Not in a motif group
homologous
HL_5J7L_180
HL_35490.2
HL_4V64_0821/BB/1910:1920No text annotation
Not in a motif group
geometric
HL_5TBW_049
HL_71924.2
HL_4V64_0831/BB/1949:1957No text annotation
Not in a motif group
homologous
HL_4WF9_046
HL_51824.1
HL_4V64_0841/BB/2027:2036No text annotation
Not in a motif group
homologous
HL_4WF9_047
HL_90642.6
HL_4V64_0851/BB/2142:2149No text annotation
Not in a motif group
HL_4V64_0861/BB/2209:2215No text annotation
Not in a motif group
homologous
HL_5J7L_185
HL_16845.6
HL_4V64_0871/BB/2248:2256No text annotation
Not in a motif group
homologous
HL_5J7L_186
NA
HL_4V64_0881/BB/2264:2276No text annotation
Not in a motif group
homologous
HL_7A0S_053
HL_19870.6
HL_4V64_0891/BB/2303:2313No text annotation
Not in a motif group
homologous
HL_7RQB_055
HL_11805.3
HL_4V64_0901/BB/2324:2331No text annotation
Not in a motif group
homologous
HL_5J7L_189
HL_12078.4
HL_4V64_0911/BB/2356:2361Other HL
Not in a motif group
homologous
HL_5J7L_190
HL_87030.2
HL_4V64_0921/BB/2374:2379GNRA
Not in a motif group
homologous
HL_4WF9_054
HL_35490.2
HL_4V64_0931/BB/2404:2413No text annotation
Not in a motif group
homologous
HL_5J7L_192
HL_40210.2
HL_4V64_0941/BB/2471:2479No text annotation
Not in a motif group
homologous
HL_5J7L_193
HL_06192.2
HL_4V64_0951/BB/2528:2535No text annotation
Not in a motif group
homologous
HL_5J7L_194
HL_91104.1
HL_4V64_0961/BB/2551:2557No text annotation
Not in a motif group
homologous
HL_4WF9_058
HL_43656.2
HL_4V64_0971/BB/2594:2599GNRA
Not in a motif group
homologous
HL_5J7L_196
HL_35490.2
HL_4V64_0981/BB/2658:2663GNRA
Not in a motif group
geometric
HL_3P22_001
HL_35490.2
HL_4V64_0991/BB/2701:2706Ribsomal LSU H95
Not in a motif group
homologous
HL_5J7L_198
HL_46680.1
HL_4V64_1001/BB/2745:2759No text annotation
Not in a motif group
homologous
HL_5J7L_199
HL_56677.7
HL_4V64_1011/BB/2796:2800No text annotation
Not in a motif group
geometric
HL_5J7L_172
HL_38927.5
HL_4V64_1021/BB/2819:2827No text annotation
Not in a motif group
homologous
HL_5J7L_201
HL_64690.1
HL_4V64_1031/BB/2856:2861No text annotation
Not in a motif group
homologous
HL_7A0S_068
HL_35490.2
HL_4V64_1041/CA/12:22No text annotation
Not in a motif group
homologous
HL_4LFB_001
HL_89881.2
HL_4V64_1051/CA/83:86No text annotation
Not in a motif group
geometric
HL_4V88_192
HL_53837.2
HL_4V64_1061/CA/158:163GNRA
Not in a motif group
homologous
HL_5J7L_003
HL_35490.2
HL_4V64_1071/CA/186:191GNRA
Not in a motif group
homologous
HL_5J7L_004
HL_35490.2
HL_4V64_1081/CA/207:212UNCG
Not in a motif group
homologous
HL_5J7L_005
HL_03562.2
HL_4V64_1091/CA/259:267No text annotation
Not in a motif group
homologous
HL_5J7L_006
HL_69023.2
HL_4V64_1101/CA/296:301GNRA
Not in a motif group
homologous
HL_5J7L_007
HL_35490.2
HL_4V64_1111/CA/320:333No text annotation
Not in a motif group
homologous
HL_5J7L_008
HL_81205.2
HL_4V64_1121/CA/342:347UNCG
Not in a motif group
homologous
HL_5J7L_009
HL_03562.2
HL_4V64_1131/CA/379:384GNRA
Not in a motif group
homologous
HL_5J7L_010
HL_35490.2
HL_4V64_1141/CA/419:424UNCG
Not in a motif group
homologous
HL_5J7L_011
HL_03562.2
HL_4V64_1151/CA/462:470No text annotation
Not in a motif group
HL_4V64_1161/CA/522:527No text annotation
Not in a motif group
geometric
HL_5J7L_143
HL_70546.1
HL_4V64_1171/CA/617:623No text annotation
Not in a motif group
homologous
HL_5J7L_014
HL_26881.3
HL_4V64_1181/CA/689:698No text annotation
Not in a motif group
homologous
HL_5J7L_015
HL_12326.1
HL_4V64_1191/CA/726:731Other HL
Not in a motif group
homologous
HL_5J7L_016
HL_87030.2
HL_4V64_1201/CA/786:796No text annotation
Not in a motif group
homologous
HL_4LFB_017
HL_12326.1
HL_4V64_1211/CA/840:846No text annotation
Not in a motif group
HL_4V64_1221/CA/862:867GNRA
Not in a motif group
homologous
HL_4LFB_019
HL_35490.2
HL_4V64_1231/CA/897:902GNRA
Not in a motif group
homologous
HL_4LFB_020
HL_35490.2
HL_4V64_1241/CA/963:972No text annotation
Not in a motif group
homologous
HL_5J7L_021
NA
HL_4V64_1251/CA/1012:1017GNRA
Not in a motif group
homologous
HL_4LFB_022
HL_35490.2
HL_4V64_1271/CA/1076:1081GNRA
Not in a motif group
homologous
HL_5J7L_023
HL_35490.2
HL_4V64_1281/CA/1089:1096No text annotation
Not in a motif group
homologous
HL_4LFB_025
HL_71554.2
HL_4V64_1291/CA/1134:1140No text annotation
Not in a motif group
homologous
HL_4LFB_026
HL_03562.2
HL_4V64_1301/CA/1165:1171GNRA
Not in a motif group
homologous
HL_4LFB_027
HL_35490.2
HL_4V64_1311/CA/1265:1270Other HL
Not in a motif group
homologous
HL_4LFB_028
HL_35490.2
HL_4V64_1321/CA/1314:1323No text annotation
Not in a motif group
homologous
HL_4LFB_029
HL_41998.1
HL_4V64_1331/CA/1356:1366No text annotation
Not in a motif group
homologous
HL_4LFB_030
HL_96366.1
HL_4V64_1341/CA/1449:1454UNCG
Not in a motif group
homologous
HL_4LFB_031
HL_03562.2
HL_4V64_1351/CA/1515:1520No text annotation
Not in a motif group
homologous
HL_4LFB_032
NA
HL_4V64_1361/DA/38:44No text annotation
Not in a motif group
geometric
HL_5TBW_006
HL_98984.4
HL_4V64_1371/DA/86:90No text annotation
Not in a motif group
homologous
HL_5J7L_204
HL_38927.5
HL_4V64_1381/DB/59:68No text annotation
Not in a motif group
homologous
HL_7RQB_001
HL_99167.2
HL_4V64_1391/DB/87:95No text annotation
Not in a motif group
homologous
HL_5J7L_135
HL_03186.1
HL_4V64_1401/DB/123:128No text annotation
Not in a motif group
homologous
HL_4WF9_003
HL_70546.1
HL_4V64_1411/DB/137:142No text annotation
Not in a motif group
HL_4V64_1421/DB/158:168No text annotation
Not in a motif group
homologous
HL_5J7L_138
HL_81820.1
HL_4V64_1431/DB/194:201No text annotation
Not in a motif group
homologous
HL_5J7L_139
HL_06192.2
HL_4V64_1441/DB/225:230No text annotation
Not in a motif group
homologous
HL_5J7L_140
HL_56241.1
HL_4V64_1451/DB/246:252No text annotation
Not in a motif group
homologous
HL_5J7L_141
HL_67216.7
HL_4V64_1461/DB/305:312T-loop with 1 bulged base
Not in a motif group
homologous
HL_5J7L_142
HL_41998.1
HL_4V64_1471/DB/319:323No text annotation
Not in a motif group
homologous
HL_5J7L_143
HL_70546.1
HL_4V64_1481/DB/327:335No text annotation
Not in a motif group
homologous
HL_5J7L_144
HL_08002.9
HL_4V64_1491/DB/382:392No text annotation
Not in a motif group
homologous
HL_5J7L_145
HL_91503.4
HL_4V64_1501/DB/410:417No text annotation
Not in a motif group
homologous
HL_5J7L_146
HL_96598.1
HL_4V64_1511/DB/462:467GNRA
Not in a motif group
homologous
HL_4WF9_015
HL_35490.2
HL_4V64_1521/DB/487:493No text annotation
Not in a motif group
homologous
HL_5J7L_148
HL_35490.2
HL_4V64_1531/DB/543:550No text annotation
Not in a motif group
HL_4V64_1541/DB/566:575T-loop with 2 stacked bulged bases
Not in a motif group
homologous
HL_5J7L_150
HL_41998.1
HL_4V64_1551/DB/611:617No text annotation
Not in a motif group
homologous
HL_5J7L_151
HL_90617.3
HL_4V64_1561/DB/629:634GNRA
Not in a motif group
homologous
HL_5J7L_152
HL_35490.2
HL_4V64_1571/DB/641:647No text annotation
Not in a motif group
homologous
HL_7RQB_021
HL_35490.2
HL_4V64_1581/DB/712:719No text annotation
Not in a motif group
homologous
HL_5J7L_154
HL_84085.2
HL_4V64_1591/DB/744:753No text annotation
Not in a motif group
homologous
HL_4WF9_023
HL_39334.6
HL_4V64_1601/DB/779:785No text annotation
Not in a motif group
homologous
HL_4WF9_024
HL_74322.1
HL_4V64_1611/DB/826:831No text annotation
Not in a motif group
homologous
HL_7RQB_025
HL_53619.1
HL_4V64_1631/DB/955:962GNRA
Not in a motif group
homologous
HL_4WF9_027
HL_35490.2
HL_4V64_1641/DB/978:985No text annotation
Not in a motif group
homologous
HL_7A0S_027
HL_64430.2
HL_4V64_1651/DB/1064:1074No text annotation
Not in a motif group
homologous
HL_6PRV_001
HL_07145.2
HL_4V64_1661/DB/1092:1099No text annotation
Not in a motif group
homologous
HL_6PRV_002
HL_84085.2
HL_4V64_1671/DB/1172:1177No text annotation
Not in a motif group
HL_4V64_1681/DB/1222:1227Other HL
Not in a motif group
homologous
HL_5J7L_164
HL_87030.2
HL_4V64_1691/DB/1281:1289T-loop with 2 stacked bulged bases
Not in a motif group
homologous
HL_5J7L_165
HL_41998.1
HL_4V64_1701/DB/1324:1330No text annotation
Not in a motif group
homologous
HL_5J7L_166
HL_46680.1
HL_4V64_1711/DB/1363:1368Other HL
Not in a motif group
homologous
HL_5J7L_167
HL_87030.2
HL_4V64_1721/DB/1389:1398No text annotation
Not in a motif group
homologous
HL_5J7L_168
HL_69023.2
HL_4V64_1731/DB/1449:1462No text annotation
Not in a motif group
HL_4V64_1741/DB/1492:1498No text annotation
Not in a motif group
homologous
HL_5J7L_170
HL_46680.1
HL_4V64_1751/DB/1533:1538UNCG
Not in a motif group
homologous
HL_5J7L_171
HL_03562.2
HL_4V64_1761/DB/1565:1568No text annotation
Not in a motif group
homologous
HL_5J7L_172
HL_38927.5
HL_4V64_1771/DB/1612:1619No text annotation
Not in a motif group
homologous
HL_7RQB_040
HL_64430.2
HL_4V64_1781/DB/1630:1636GNRA with one bulged base
Not in a motif group
homologous
HL_5J7L_174
HL_35490.2
HL_4V64_1791/DB/1691:1696UNCG
Not in a motif group
homologous
HL_5J7L_175
HL_03562.2
HL_4V64_1801/DB/1728:1731No text annotation
Not in a motif group
HL_4V64_1811/DB/1752:1756No text annotation
Not in a motif group
homologous
HL_7RQB_044
HL_76539.5
HL_4V64_1821/DB/1777:1787No text annotation
Not in a motif group
homologous
HL_4WF9_043
HL_43613.5
HL_4V64_1831/DB/1806:1811No text annotation
Not in a motif group
homologous
HL_5J7L_179
HL_35490.2
HL_4V64_1841/DB/1868:1873Other HL
Not in a motif group
homologous
HL_5J7L_180
HL_35490.2
HL_4V64_1851/DB/1910:1920No text annotation
Not in a motif group
geometric
HL_5TBW_049
HL_71924.2
HL_4V64_1861/DB/1949:1957No text annotation
Not in a motif group
homologous
HL_4WF9_046
HL_51824.1
HL_4V64_1871/DB/2027:2036No text annotation
Not in a motif group
homologous
HL_4WF9_047
HL_90642.6
HL_4V64_1881/DB/2142:2149No text annotation
Not in a motif group
HL_4V64_1891/DB/2209:2215No text annotation
Not in a motif group
homologous
HL_5J7L_185
HL_16845.6
HL_4V64_1901/DB/2248:2256No text annotation
Not in a motif group
homologous
HL_5J7L_186
NA
HL_4V64_1911/DB/2264:2276No text annotation
Not in a motif group
homologous
HL_7A0S_053
HL_19870.6
HL_4V64_1921/DB/2303:2313No text annotation
Not in a motif group
homologous
HL_7RQB_055
HL_11805.3
HL_4V64_1931/DB/2324:2331No text annotation
Not in a motif group
homologous
HL_5J7L_189
HL_12078.4
HL_4V64_1941/DB/2356:2361Other HL
Not in a motif group
homologous
HL_5J7L_190
HL_87030.2
HL_4V64_1951/DB/2374:2379GNRA
Not in a motif group
homologous
HL_4WF9_054
HL_35490.2
HL_4V64_1961/DB/2404:2413No text annotation
Not in a motif group
homologous
HL_5J7L_192
HL_40210.2
HL_4V64_1971/DB/2471:2479No text annotation
Not in a motif group
homologous
HL_5J7L_193
HL_06192.2
HL_4V64_1981/DB/2528:2535No text annotation
Not in a motif group
homologous
HL_5J7L_194
HL_91104.1
HL_4V64_1991/DB/2551:2557No text annotation
Not in a motif group
homologous
HL_4WF9_058
HL_43656.2
HL_4V64_2001/DB/2594:2599GNRA
Not in a motif group
homologous
HL_5J7L_196
HL_35490.2
HL_4V64_2011/DB/2658:2663GNRA
Not in a motif group
homologous
HL_5J7L_197
HL_35490.2
HL_4V64_2021/DB/2701:2706Ribsomal LSU H95
Not in a motif group
homologous
HL_5J7L_198
HL_46680.1
HL_4V64_2031/DB/2745:2759No text annotation
Not in a motif group
homologous
HL_5J7L_199
HL_56677.7
HL_4V64_2041/DB/2796:2800No text annotation
Not in a motif group
geometric
HL_5J7L_172
HL_38927.5
HL_4V64_2051/DB/2819:2827No text annotation
Not in a motif group
homologous
HL_5J7L_201
HL_64690.1
HL_4V64_2061/DB/2856:2861No text annotation
Not in a motif group
homologous
HL_7A0S_068
HL_35490.2

Problematic loops

#loop idProblemSequence
HL_4V64_059No text annotation
HL_4V64_126No text annotation
HL_4V64_162No text annotation

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
IL_4V64_0011/AA/30:32,
1/AA/552:553
Single bulged G
Not in a motif group
homologous
IL_5J7L_001
IL_00225.3
IL_4V64_0021/AA/44:45,
1/AA/396:398
Single bulged A
Not in a motif group
homologous
IL_5J7L_002
IL_37497.6
IL_4V64_0031/AA/47:52,
1/AA/359:361
No text annotation
Not in a motif group
homologous
IL_5J7L_003
IL_14177.1
IL_4V64_0041/AA/54:56,
1/AA/356:357
Minor groove platform
Not in a motif group
homologous
IL_4LFB_004
IL_80097.1
IL_4V64_0051/AA/63:66,
1/AA/103:104
Multiple bulged bases
Not in a motif group
homologous
IL_5J7L_005
IL_76389.1
IL_4V64_0061/AA/67:69,
1/AA/99:102
Minor groove platform with extra cWW
Not in a motif group
homologous
IL_5J7L_006
IL_65006.1
IL_4V64_0071/AA/70:73,
1/AA/97:98
Minor groove platform
Not in a motif group
homologous
IL_5J7L_007
IL_15052.1
IL_4V64_0081/AA/75:76,
1/AA/93:95
No text annotation
Not in a motif group
IL_4V64_0091/AA/128:131,
1/AA/231:233
Isolated non-canonical cWW with bulges
Not in a motif group
homologous
IL_5J7L_009
IL_43275.1
IL_4V64_0101/AA/132:136,
1/AA/227:230
Minor groove platform related
Not in a motif group
homologous
IL_5J7L_010
IL_58764.3
IL_4V64_0111/AA/144:146,
1/AA/176:178
Isolated cWH basepair
Not in a motif group
homologous
IL_5J7L_011
IL_70707.2
IL_4V64_0121/AA/147:153,
1/AA/168:175
tWH-tWH-tHW-tHW
Not in a motif group
homologous
IL_5J7L_012
IL_80604.2
IL_4V64_0131/AA/203:206,
1/AA/213:214
Minor groove platform
Not in a motif group
geometric
IL_3MXH_005
IL_15052.1
IL_4V64_0141/AA/242:247,
1/AA/277:284
Kink-turn with non-sequential stacking
Not in a motif group
homologous
IL_5J7L_014
IL_45067.2
IL_4V64_0151/AA/249:252,
1/AA/274:275
No text annotation
Not in a motif group
homologous
IL_5J7L_015
IL_48100.2
IL_4V64_0161/AA/292:293,
1/AA/304:308
C-loop
Not in a motif group
homologous
IL_6CZR_125
IL_37712.2
IL_4V64_0171/AA/367:369,
1/AA/392:393
Single bulged U
Not in a motif group
homologous
IL_5J7L_017
IL_83039.16
IL_4V64_0181/AA/371:375,
1/AA/389:390
C-loop
Not in a motif group
homologous
IL_4LFB_015
IL_75255.1
IL_4V64_0191/AA/375:376,
1/AA/387:389
Single bulged G
Not in a motif group
geometric
IL_5J7L_019
IL_00225.3
IL_4V64_0201/AA/409:416,
1/AA/427:433
No text annotation
Not in a motif group
homologous
IL_4LFB_017
IL_28026.1
IL_4V64_0211/AA/440:442,
1/AA/492:497
No text annotation
Not in a motif group
homologous
IL_5J7L_021
IL_22248.1
IL_4V64_0221/AA/446:450,
1/AA/483:488
tSH-tHW-tWW
Not in a motif group
geometric
IL_5J7L_022
IL_88269.3
IL_4V64_0231/AA/450:454,
1/AA/479:483
No text annotation
Not in a motif group
IL_4V64_0241/AA/454:455,
1/AA/477:479
Single stack bend
Not in a motif group
geometric
IL_5J7L_032
IL_76488.4
IL_4V64_0251/AA/458:459,
1/AA/472:474
Single stack bend
Not in a motif group
geometric
IL_4V83_236
IL_76488.4
IL_4V64_0261/AA/460:462,
1/AA/470:471
No text annotation
Not in a motif group
IL_4V64_0271/AA/504:511,
1/AA/540:541
SSU/LSU pseudoknot
Not in a motif group
homologous
IL_5J7L_024
IL_15861.7
IL_4V64_0281/AA/515:521,
1/AA/528:536
No text annotation
Not in a motif group
geometric
IL_4V88_415
IL_55871.1
IL_4V64_0291/AA/569:575,
1/AA/880:881
No text annotation
Not in a motif group
homologous
IL_5J7L_026
IL_69996.1
IL_4V64_0301/AA/580:584,
1/AA/757:761
tSH-tHW-tHS
Not in a motif group
homologous
IL_5J7L_027
IL_17136.1
IL_4V64_0311/AA/594:596,
1/AA/644:645
Major groove platform
Not in a motif group
homologous
IL_5J7L_028
IL_27635.3
IL_4V64_0321/AA/597:598,
1/AA/640:643
Major groove minor groove platform; mini C-loop
Not in a motif group
homologous
IL_5J7L_029
IL_09061.8
IL_4V64_0331/AA/605:612,
1/AA/628:633
No text annotation
Not in a motif group
homologous
IL_5J7L_030
IL_78349.1
IL_4V64_0341/AA/654:655,
1/AA/751:754
Major groove platform; stack outside cWW
Not in a motif group
homologous
IL_5J7L_031
IL_50694.2
IL_4V64_0351/AA/658:659,
1/AA/746:748
Single stack bend
Not in a motif group
homologous
IL_5J7L_032
IL_76488.4
IL_4V64_0361/AA/662:666,
1/AA/740:743
Tandem non-canonical cWW pairs
Not in a motif group
homologous
IL_5J7L_033
IL_71110.1
IL_4V64_0371/AA/673:678,
1/AA/712:717
No text annotation
Not in a motif group
homologous
IL_4LFB_030
IL_04668.2
IL_4V64_0381/AA/684:688,
1/AA/699:706
Kink-turn
Not in a motif group
homologous
IL_5J7L_035
IL_45067.2
IL_4V64_0391/AA/774:778,
1/AA/804:805
Left turn
Not in a motif group
homologous
IL_4LFB_032
IL_29346.1
IL_4V64_0401/AA/779:783,
1/AA/799:803
tSH-tHW-tHS
Not in a motif group
homologous
IL_5J7L_037
IL_17136.1
IL_4V64_0411/AA/887:894,
1/AA/905:910
8x6 Sarcin-Ricin with inserted Y; G-bulge
Not in a motif group
homologous
IL_5J7L_038
IL_24606.2
IL_4V64_0421/AA/922:923,
1/AA/1393:1395
Single bulged A
Not in a motif group
homologous
IL_5J7L_039
IL_37497.6
IL_4V64_0431/AA/925:927,
1/AA/1390:1391
Single bulged G
Not in a motif group
homologous
IL_5J7L_040
IL_00225.3
IL_4V64_0441/AA/933:935,
1/AA/1380:1384
Minor groove platform
Not in a motif group
homologous
IL_5J7L_041
IL_47078.1
IL_4V64_0451/AA/953:954,
1/AA/1226:1228
Minor groove platform
Not in a motif group
homologous
IL_4LFB_038
IL_42622.4
IL_4V64_0461/AA/993:997,
1/AA/1044:1045
Minor groove platform
Not in a motif group
homologous
IL_5J7L_043
IL_47078.1
IL_4V64_0471/AA/998:999,
1/AA/1041:1043
Single stack bend
Not in a motif group
homologous
IL_5J7L_044
IL_76488.4
IL_4V64_0481/AA/1048:1050,
1/AA/1208:1209
Single bulged U
Not in a motif group
homologous
IL_5J7L_046
IL_83039.16
IL_4V64_0491/AA/1052:1056,
1/AA/1204:1206
Isolated cWS basepair
Not in a motif group
homologous
IL_4LFB_044
IL_76319.2
IL_4V64_0501/AA/1057:1058,
1/AA/1199:1203
Minor groove platform
Not in a motif group
homologous
IL_5J7L_048
IL_80097.1
IL_4V64_0511/AA/1060:1061,
1/AA/1195:1197
Single bulged A
Not in a motif group
homologous
IL_5J7L_049
IL_37497.6
IL_4V64_0521/AA/1061:1063,
1/AA/1193:1195
No text annotation
Not in a motif group
geometric
IL_5J7L_050
IL_86319.2
IL_4V64_0531/AA/1124:1128,
1/AA/1144:1149
No text annotation
Not in a motif group
homologous
IL_5J7L_051
IL_93211.1
IL_4V64_0541/AA/1129:1132,
1/AA/1142:1143
Minor groove platform
Not in a motif group
homologous
IL_5J7L_052
IL_15052.1
IL_4V64_0551/AA/1158:1161,
1/AA/1175:1181
No text annotation
Not in a motif group
geometric
IL_5J7L_053
IL_42032.1
IL_4V64_0561/AA/1247:1253,
1/AA/1284:1290
No text annotation
Not in a motif group
homologous
IL_5J7L_054
IL_09129.1
IL_4V64_0571/AA/1255:1258,
1/AA/1277:1282
No text annotation
Not in a motif group
homologous
IL_4LFB_052
IL_84205.1
IL_4V64_0581/AA/1259:1263,
1/AA/1272:1276
Triple sheared
Not in a motif group
homologous
IL_5J7L_056
IL_56467.8
IL_4V64_0591/AA/1303:1308,
1/AA/1329:1334
No text annotation
Not in a motif group
geometric
IL_4V88_462
IL_19954.2