6WNT Internal, hairpin and 3-way junction loop motifs
Valid loops
# | loop id | location | motif |
---|---|---|---|
1 | ➜ | 1/4/24:30,1/4/510:516 | NA |
2 | ➜ | 1/4/36:37,1/4/442:444 | NA |
3 | ➜ | 1/4/43:44,1/4/434:436 | NA |
4 | ➜ | 1/4/81:85,1/4/97:105 | NA |
5 | ➜ | 1/4/183:184,1/4/212:214 | NA |
6 | ➜ | 1/4/188:194,1/4/201:208 | NA |
7 | ➜ | 1/4/239:245,1/4/253:258 | NA |
8 | ➜ | 1/4/269:271,1/4/366:370 | NA |
9 | ➜ | 1/4/274:281,1/4/359:363 | NA |
10 | ➜ | 1/4/293:295,1/4/343:347 | NA |
11 | ➜ | 1/4/481:484,1/4/496:509 | NA |
12 | ➜ | 1/4/536:539,1/4/554:557 | NA |
13 | ➜ | 1/4/564:566,1/4/575:577 | NA |
14 | ➜ | 1/4/606:610,1/4/618:622 | NA |
15 | ➜ | 1/4/672:674,1/4/806:808 | NA |
16 | ➜ | 1/4/674:678,1/4/799:806 | NA |
17 | ➜ | 1/4/697:698,1/4/763:765 | NA |
18 | ➜ | 1/4/702:703,1/4/728:730 | NA |
19 | ➜ | 1/4/703:707,1/4/724:728 | NA |
20 | ➜ | 1/4/738:740,1/4/757:758 | NA |
21 | ➜ | 1/4/775:777,1/4/787:791 | NA |
22 | ➜ | 1/4/844:847,1/4/933:934 | NA |
23 | ➜ | 1/4/847:848,1/4/930:933 | NA |
24 | ➜ | 1/4/850:851,1/4/926:928 | NA |
25 | ➜ | 1/4/856:862,1/4/915:921 | NA |
26 | ➜ | 1/4/862:864,1/4/912:915 | NA |
27 | ➜ | 1/4/864:868,1/4/909:912 | NA |
28 | ➜ | 1/4/870:872,1/4/905:907 | NA |
29 | ➜ | 1/4/875:879,1/4/898:902 | NA |
30 | ➜ | 1/4/879:882,1/4/894:898 | NA |
31 | ➜ | 1/4/994:996,1/4/1287:1288 | NA |
32 | ➜ | 1/4/998:1002,1/4/1281:1285 | NA |
33 | ➜ | 1/4/1004:1011,1/4/1278:1279 | NA |
34 | ➜ | 1/4/1011:1013,1/4/1277:1278 | NA |
35 | ➜ | 1/4/1018:1024,1/4/1268:1272 | NA |
36 | ➜ | 1/4/1039:1047,1/4/1137:1145 | NA |
37 | ➜ | 1/4/1083:1084,1/4/1131:1133 | NA |
38 | ➜ | 1/4/1089:1094,1/4/1122:1126 | NA |
39 | ➜ | 1/4/1096:1097,1/4/1117:1120 | NA |
40 | ➜ | 1/4/1100:1104,1/4/1110:1114 | NA |
41 | ➜ | 1/4/1159:1162,1/4/1249:1251 | NA |
42 | ➜ | 1/4/1166:1169,1/4/1242:1245 | NA |
43 | ➜ | 1/4/1171:1180,1/4/1235:1240 | NA |
44 | ➜ | 1/4/1187:1190,1/4/1204:1207 | NA |
45 | ➜ | 1/4/1215:1219,1/4/1228:1230 | NA |
46 | ➜ | 1/4/1324:1326,1/4/1375:1378 | NA |
47 | ➜ | 1/4/1330:1334,1/4/1368:1371 | NA |
48 | ➜ | 1/4/1336:1343,1/4/1362:1366 | NA |
49 | ➜ | 1/4/1390:1397,1/4/2139:2145 | NA |
50 | ➜ | 1/4/1438:1441,1/4/1731:1732 | NA |
51 | ➜ | 1/4/1447:1451,1/4/1459:1461 | NA |
52 | ➜ | 1/4/1479:1483,1/4/1504:1508 | NA |
53 | ➜ | 1/4/1485:1489,1/4/1498:1502 | NA |
54 | ➜ | 1/4/1543:1544,1/4/1710:1715 | NA |
55 | ➜ | 1/4/1545:1549,1/4/1705:1709 | NA |
56 | ➜ | 1/4/1560:1563,1/4/1685:1689 | NA |
57 | ➜ | 1/4/1565:1568,1/4/1679:1683 | NA |
58 | ➜ | 1/4/1578:1579,1/4/1587:1589 | NA |
59 | ➜ | 1/4/1596:1599,1/4/1648:1652 | NA |
60 | ➜ | 1/4/1602:1606,1/4/1641:1645 | NA |
61 | ➜ | 1/4/1609:1610,1/4/1635:1638 | NA |
62 | ➜ | 1/4/1617:1619,1/4/1627:1628 | NA |
63 | ➜ | 1/4/1654:1658,1/4/1669:1674 | NA |
64 | ➜ | 1/4/1779:1784,1/4/2132:2134 | NA |
65 | ➜ | 1/4/1791:1793,1/4/2123:2125 | NA |
66 | ➜ | 1/4/1794:1797,1/4/2121:2122 | NA |
67 | ➜ | 1/4/1797:1802,1/4/2118:2121 | NA |
68 | ➜ | 1/4/1814:1819,1/4/1824:1830 | NA |
69 | ➜ | 1/4/1840:1846,1/4/1870:1874 | NA |
70 | ➜ | 1/4/1848:1852,1/4/1864:1868 | NA |
71 | ➜ | 1/4/1898:1899,1/4/2108:2110 | NA |
72 | ➜ | 1/4/1926:1932,1/4/1941:1949 | NA |
73 | ➜ | 1/4/1965:1968,1/4/2030:2031 | NA |
74 | ➜ | 1/4/1969:1970,1/4/2026:2029 | NA |
75 | ➜ | 1/4/1974:1977,1/4/2021:2022 | NA |
76 | ➜ | 1/4/1992:1995,1/4/2002:2006 | NA |
77 | ➜ | 1/4/2061:2062,1/4/2092:2095 | NA |
78 | ➜ | 1/4/2062:2073,1/4/2089:2092 | NA |
79 | ➜ | 1/4/2178:2180,1/4/2745:2746 | NA |
80 | ➜ | 1/4/2182:2184,1/4/2740:2743 | NA |
81 | ➜ | 1/4/2195:2197,1/4/2570:2571 | NA |
82 | ➜ | 1/4/2198:2199,1/4/2566:2569 | NA |
83 | ➜ | 1/4/2209:2211,1/4/2364:2367 | NA |
84 | ➜ | 1/4/2213:2215,1/4/2360:2362 | NA |
85 | ➜ | 1/4/2230:2233,1/4/2312:2315 | NA |
86 | ➜ | 1/4/2233:2249,1/4/2305:2312 | NA |
87 | ➜ | 1/4/2330:2332,1/4/2348:2349 | NA |
88 | ➜ | 1/4/2478:2481,1/4/2492:2495 | NA |
89 | ➜ | 1/4/2529:2531,1/4/2542:2543 | NA |
90 | ➜ | 1/4/2594:2598,1/4/2608:2612 | NA |
91 | ➜ | 1/4/2635:2636,1/4/2708:2710 | NA |
92 | ➜ | 1/4/2638:2640,1/4/2702:2706 | NA |
93 | ➜ | 1/4/2640:2641,1/4/2699:2702 | NA |
94 | ➜ | 1/4/2650:2651,1/4/2668:2671 | NA |
95 | ➜ | 1/4/2719:2720,1/4/2729:2731 | NA |
96 | ➜ | 1/4/2764:2768,1/4/2902:2910 | NA |
97 | ➜ | 1/4/2780:2786,1/4/2791:2796 | NA |
98 | ➜ | 1/4/2808:2812,1/4/2853:2855 | NA |
99 | ➜ | 1/4/2815:2819,1/4/2846:2850 | NA |
100 | ➜ | 1/4/2823:2824,1/4/2839:2842 | NA |
101 | ➜ | 1/4/2865:2870,1/4/2890:2895 | NA |
102 | ➜ | 1/4/2934:2939,1/4/3017:3020 | NA |
103 | ➜ | 1/4/2966:2967,1/4/3006:3008 | NA |
104 | ➜ | 1/4/2971:2974,1/4/2998:3002 | NA |
105 | ➜ | 1/4/2975:2980,1/4/2993:2997 | NA |
Problematic loops
No problematic loops
Valid loops
# | loop id | location | motif |
---|---|---|---|
1 | ➜ | 1/4/59:68 | NA |
2 | ➜ | 1/4/87:95 | NA |
3 | ➜ | 1/4/123:128 | NA |
4 | ➜ | 1/4/137:142 | NA |
5 | ➜ | 1/4/158:168 | NA |
6 | ➜ | 1/4/194:201 | NA |
7 | ➜ | 1/4/225:230 | NA |
8 | ➜ | 1/4/246:252 | NA |
9 | ➜ | 1/4/305:312 | NA |
10 | ➜ | 1/4/327:335 | NA |
11 | ➜ | 1/4/382:392 | NA |
12 | ➜ | 1/4/410:417 | NA |
13 | ➜ | 1/4/462:467 | NA |
14 | ➜ | 1/4/487:493 | NA |
15 | ➜ | 1/4/544:549 | NA |
16 | ➜ | 1/4/566:575 | NA |
17 | ➜ | 1/4/611:617 | NA |
18 | ➜ | 1/4/629:634 | NA |
19 | ➜ | 1/4/640:648 | NA |
20 | ➜ | 1/4/712:719 | NA |
21 | ➜ | 1/4/744:753 | NA |
22 | ➜ | 1/4/779:785 | NA |
23 | ➜ | 1/4/826:831 | NA |
24 | ➜ | 1/4/882:894 | NA |
25 | ➜ | 1/4/955:962 | NA |
26 | ➜ | 1/4/978:985 | NA |
27 | ➜ | 1/4/1061:1067 | NA |
28 | ➜ | 1/4/1104:1110 | NA |
29 | ➜ | 1/4/1192:1202 | NA |
30 | ➜ | 1/4/1220:1227 | NA |
31 | ➜ | 1/4/1299:1306 | NA |
32 | ➜ | 1/4/1350:1355 | NA |
33 | ➜ | 1/4/1409:1417 | NA |
34 | ➜ | 1/4/1452:1458 | NA |
35 | ➜ | 1/4/1491:1496 | NA |
36 | ➜ | 1/4/1517:1526 | NA |
37 | ➜ | 1/4/1579:1587 | NA |
38 | ➜ | 1/4/1620:1626 | NA |
39 | ➜ | 1/4/1661:1666 | NA |
40 | ➜ | 1/4/1693:1696 | NA |
41 | ➜ | 1/4/1740:1747 | NA |
42 | ➜ | 1/4/1758:1764 | NA |
43 | ➜ | 1/4/1819:1824 | NA |
44 | ➜ | 1/4/1855:1861 | NA |
45 | ➜ | 1/4/1880:1884 | NA |
46 | ➜ | 1/4/1905:1915 | NA |
47 | ➜ | 1/4/1934:1939 | NA |
48 | ➜ | 1/4/1996:2001 | NA |
49 | ➜ | 1/4/2038:2048 | NA |
50 | ➜ | 1/4/2077:2085 | NA |
51 | ➜ | 1/4/2155:2164 | NA |
52 | ➜ | 1/4/2267:2280 | NA |
53 | ➜ | 1/4/2337:2343 | NA |
54 | ➜ | 1/4/2376:2384 | NA |
55 | ➜ | 1/4/2392:2404 | NA |
56 | ➜ | 1/4/2431:2441 | NA |
57 | ➜ | 1/4/2452:2459 | NA |
58 | ➜ | 1/4/2484:2489 | NA |
59 | ➜ | 1/4/2502:2507 | NA |
60 | ➜ | 1/4/2532:2541 | NA |
61 | ➜ | 1/4/2599:2607 | NA |
62 | ➜ | 1/4/2656:2663 | NA |
63 | ➜ | 1/4/2679:2685 | NA |
64 | ➜ | 1/4/2722:2727 | NA |
65 | ➜ | 1/4/2786:2791 | NA |
66 | ➜ | 1/4/2829:2834 | NA |
67 | ➜ | 1/4/2873:2887 | NA |
68 | ➜ | 1/4/2923:2929 | NA |
69 | ➜ | 1/4/2947:2955 | NA |
70 | ➜ | 1/4/2984:2989 | NA |
Problematic loops
No problematic loops
Valid loops
# | loop id | location | motif |
---|---|---|---|
1 | ➜ | 1/4/30:31,1/4/474:481,1/4/509:510 | NA |
2 | ➜ | 1/4/56:57,1/4/70:76,1/4/110:114 | NA |
3 | ➜ | 1/4/683:689,1/4/773:775,1/4/791:794 | NA |
4 | ➜ | 1/4/698:700,1/4/732:736,1/4/760:763 | NA |
5 | ➜ | 1/4/1048:1052,1/4/1076:1082,1/4/1134:1136 | NA |
6 | ➜ | 1/4/1183:1187,1/4/1207:1215,1/4/1230:1232 | NA |
7 | ➜ | 1/4/1426:1431,1/4/1753:1755,1/4/1767:1770 | NA |
8 | ➜ | 1/4/1434:1437,1/4/1733:1739,1/4/1748:1750 | NA |
9 | ➜ | 1/4/1472:1477,1/4/1510:1513,1/4/1530:1531 | NA |
10 | ➜ | 1/4/2219:2221,1/4/2324:2328,1/4/2351:2356 | NA |
11 | ➜ | 1/4/2423:2427,1/4/2445:2451,1/4/2460:2465 | NA |
12 | ➜ | 1/4/2645:2648,1/4/2673:2675,1/4/2689:2695 | NA |
13 | ➜ | 1/4/2917:2919,1/4/2933:2934,1/4/3020:3022 | NA |
14 | ➜ | 1/4/2940:2943,1/4/2959:2964,1/4/3010:3016 | NA |
Problematic loops
No problematic loops
Coloring options: