6WNT Internal, Hairpin and 3-way Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_6WNT_001 | 1/4/59:68 | No text annotation Not in a motif group | geometric HL_4GXY_003 HL_96598.1 | |
| HL_6WNT_002 | 1/4/87:95 | No text annotation Not in a motif group | geometric HL_5J7L_135 HL_03186.1 | |
| HL_6WNT_003 | 1/4/123:128 | No text annotation Not in a motif group | geometric HL_5J7L_136 HL_70546.1 | |
| HL_6WNT_004 | 1/4/137:142 | No text annotation Not in a motif group | geometric HL_5TBW_022 HL_01057.2 | |
| HL_6WNT_005 | 1/4/158:168 | No text annotation Not in a motif group | geometric HL_5J7L_138 HL_81820.1 | |
| HL_6WNT_006 | 1/4/194:201 | No text annotation Not in a motif group | geometric HL_5J7L_139 HL_06192.2 | |
| HL_6WNT_007 | 1/4/225:230 | No text annotation Not in a motif group | geometric HL_5J7L_140 HL_56241.1 | |
| HL_6WNT_008 | 1/4/246:252 | No text annotation Not in a motif group | geometric HL_5J7L_141 HL_67216.7 | |
| HL_6WNT_009 | 1/4/305:312 | T-loop with 2 bulged bases not stacked Not in a motif group | geometric HL_5C45_003 HL_41998.1 | |
| HL_6WNT_010 | 1/4/327:335 | No text annotation Not in a motif group | geometric HL_7RQB_012 HL_08002.9 | |
| HL_6WNT_011 | 1/4/382:392 | No text annotation Not in a motif group | geometric HL_5J7L_145 HL_91503.4 | |
| HL_6WNT_012 | 1/4/410:417 | No text annotation Not in a motif group | geometric HL_5J7L_146 HL_96598.1 | |
| HL_6WNT_013 | 1/4/462:467 | No text annotation Not in a motif group | geometric HL_7RQB_015 HL_35490.2 | |
| HL_6WNT_014 | 1/4/487:493 | No text annotation Not in a motif group | geometric HL_5J7L_148 HL_35490.2 | |
| HL_6WNT_015 | 1/4/544:549 | No text annotation Not in a motif group | geometric HL_5U3G_001 HL_87030.2 | |
| HL_6WNT_016 | 1/4/566:575 | T-loop with 2 stacked bulged bases Not in a motif group | geometric HL_5J7L_150 HL_41998.1 | |
| HL_6WNT_017 | 1/4/611:617 | No text annotation Not in a motif group | geometric HL_361D_002 HL_90617.3 | |
| HL_6WNT_018 | 1/4/629:634 | GNRA Not in a motif group | geometric HL_5J7L_152 HL_35490.2 | |
| HL_6WNT_019 | 1/4/640:648 | No text annotation Not in a motif group | ||
| HL_6WNT_020 | 1/4/712:719 | No text annotation Not in a motif group | geometric HL_5J7L_154 HL_84085.2 | |
| HL_6WNT_021 | 1/4/744:753 | No text annotation Not in a motif group | geometric HL_7A0S_022 HL_39334.6 | |
| HL_6WNT_022 | 1/4/779:785 | No text annotation Not in a motif group | geometric HL_7A0S_007 HL_02862.2 | |
| HL_6WNT_023 | 1/4/826:831 | No text annotation Not in a motif group | geometric HL_7RQB_025 HL_53619.1 | |
| HL_6WNT_024 | 1/4/882:894 | No text annotation Not in a motif group | ||
| HL_6WNT_025 | 1/4/955:962 | No text annotation Not in a motif group | ||
| HL_6WNT_026 | 1/4/978:985 | No text annotation Not in a motif group | geometric HL_5NFV_001 HL_76539.5 | |
| HL_6WNT_027 | 1/4/1061:1067 | No text annotation Not in a motif group | geometric HL_2ZNI_001 HL_26380.1 | |
| HL_6WNT_028 | 1/4/1104:1110 | No text annotation Not in a motif group | homologous HL_5J7L_203 HL_87939.2 | |
| HL_6WNT_029 | 1/4/1192:1202 | No text annotation Not in a motif group | ||
| HL_6WNT_030 | 1/4/1220:1227 | No text annotation Not in a motif group | geometric HL_7RQB_022 HL_84085.2 | |
| HL_6WNT_031 | 1/4/1299:1306 | No text annotation Not in a motif group | ||
| HL_6WNT_032 | 1/4/1350:1355 | Other HL Not in a motif group | geometric HL_5J7L_164 HL_87030.2 | |
| HL_6WNT_033 | 1/4/1409:1417 | T-loop with 2 stacked bulged bases Not in a motif group | geometric HL_5J7L_165 HL_41998.1 | |
| HL_6WNT_034 | 1/4/1452:1458 | No text annotation Not in a motif group | geometric HL_5J7L_166 HL_46680.1 | |
| HL_6WNT_035 | 1/4/1491:1496 | Other HL Not in a motif group | geometric HL_5J7L_167 HL_87030.2 | |
| HL_6WNT_036 | 1/4/1517:1526 | No text annotation Not in a motif group | geometric HL_5J7L_168 HL_69023.2 | |
| HL_6WNT_037 | 1/4/1579:1587 | No text annotation Not in a motif group | geometric HL_5J7L_169 HL_53837.2 | |
| HL_6WNT_038 | 1/4/1620:1626 | No text annotation Not in a motif group | geometric HL_5J7L_170 HL_46680.1 | |
| HL_6WNT_039 | 1/4/1661:1666 | No text annotation Not in a motif group | ||
| HL_6WNT_040 | 1/4/1693:1696 | No text annotation Not in a motif group | geometric HL_4V9F_041 HL_49678.2 | |
| HL_6WNT_041 | 1/4/1740:1747 | No text annotation Not in a motif group | geometric HL_7RQB_040 HL_64430.2 | |
| HL_6WNT_042 | 1/4/1758:1764 | GNRA with one bulged base Not in a motif group | geometric HL_5J7L_174 HL_35490.2 | |
| HL_6WNT_043 | 1/4/1819:1824 | UNCG Not in a motif group | geometric HL_4PMI_004 HL_03562.2 | |
| HL_6WNT_044 | 1/4/1855:1861 | No text annotation Not in a motif group | geometric HL_5TBW_012 HL_86373.3 | |
| HL_6WNT_045 | 1/4/1880:1884 | No text annotation Not in a motif group | geometric HL_4V9F_046 HL_76539.5 | |
| HL_6WNT_046 | 1/4/1905:1915 | No text annotation Not in a motif group | geometric HL_4WF9_043 HL_43613.5 | |
| HL_6WNT_047 | 1/4/1934:1939 | No text annotation Not in a motif group | geometric HL_5J7L_179 HL_35490.2 | |
| HL_6WNT_048 | 1/4/1996:2001 | GNRA Not in a motif group | geometric HL_2OIU_001 HL_35490.2 | |
| HL_6WNT_049 | 1/4/2038:2048 | No text annotation Not in a motif group | ||
| HL_6WNT_050 | 1/4/2077:2085 | No text annotation Not in a motif group | geometric HL_5J7L_182 HL_51824.1 | |
| HL_6WNT_051 | 1/4/2155:2164 | No text annotation Not in a motif group | geometric HL_4WF9_047 HL_90642.6 | |
| HL_6WNT_052 | 1/4/2267:2280 | No text annotation Not in a motif group | ||
| HL_6WNT_053 | 1/4/2337:2343 | No text annotation Not in a motif group | geometric HL_5J7L_185 HL_16845.6 | |
| HL_6WNT_054 | 1/4/2376:2384 | No text annotation Not in a motif group | geometric HL_4LFB_002 HL_40210.2 | |
| HL_6WNT_055 | 1/4/2392:2404 | No text annotation Not in a motif group | geometric HL_7RQB_054 HL_19870.6 | |
| HL_6WNT_056 | 1/4/2431:2441 | No text annotation Not in a motif group | geometric HL_5J7L_188 HL_11805.3 | |
| HL_6WNT_057 | 1/4/2452:2459 | No text annotation Not in a motif group | geometric HL_5J7L_189 HL_12078.4 | |
| HL_6WNT_058 | 1/4/2484:2489 | Other HL Not in a motif group | geometric HL_5J7L_190 HL_87030.2 | |
| HL_6WNT_059 | 1/4/2502:2507 | No text annotation Not in a motif group | geometric HL_7RQB_020 HL_35490.2 | |
| HL_6WNT_060 | 1/4/2532:2541 | No text annotation Not in a motif group | geometric HL_5J7L_192 HL_40210.2 | |
| HL_6WNT_061 | 1/4/2599:2607 | No text annotation Not in a motif group | geometric HL_7A0S_059 HL_06192.2 | |
| HL_6WNT_062 | 1/4/2656:2663 | No text annotation Not in a motif group | geometric HL_5J7L_194 HL_91104.1 | |
| HL_6WNT_063 | 1/4/2679:2685 | No text annotation Not in a motif group | geometric HL_5TBW_063 HL_43656.2 | |
| HL_6WNT_064 | 1/4/2722:2727 | No text annotation Not in a motif group | geometric HL_7RQB_069 HL_35490.2 | |
| HL_6WNT_065 | 1/4/2786:2791 | GNRA Not in a motif group | geometric HL_4V9F_066 HL_35490.2 | |
| HL_6WNT_066 | 1/4/2829:2834 | Ribsomal LSU H95 Not in a motif group | geometric HL_5J7L_198 HL_46680.1 | |
| HL_6WNT_067 | 1/4/2873:2887 | No text annotation Not in a motif group | geometric HL_5J7L_199 HL_56677.7 | |
| HL_6WNT_068 | 1/4/2923:2929 | No text annotation Not in a motif group | geometric HL_7A0S_023 HL_56241.1 | |
| HL_6WNT_069 | 1/4/2947:2955 | No text annotation Not in a motif group | geometric HL_5J7L_201 HL_64690.1 | |
| HL_6WNT_070 | 1/4/2984:2989 | Other HL Not in a motif group | geometric HL_4Y1M_004 HL_35490.2 |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_6WNT_001 | 1/4/24:30, 1/4/510:516 | Triple sheared with non-canonical cWW Not in a motif group | geometric IL_4WF9_001 IL_66414.6 | |
| IL_6WNT_002 | 1/4/36:37, 1/4/442:444 | Single bulged A Not in a motif group | geometric IL_7RQB_002 IL_37497.6 | |
| IL_6WNT_003 | 1/4/43:44, 1/4/434:436 | Minor groove platform Not in a motif group | geometric IL_5J7L_247 IL_42622.4 | |
| IL_6WNT_004 | 1/4/81:85, 1/4/97:105 | No text annotation Not in a motif group | geometric IL_5J7L_248 IL_93699.1 | |
| IL_6WNT_005 | 1/4/183:184, 1/4/212:214 | Single stack bend Not in a motif group | geometric IL_5J7L_249 IL_76488.4 | |
| IL_6WNT_006 | 1/4/188:194, 1/4/201:208 | 8x7 Sarcin-Ricin; G-bulge Not in a motif group | geometric IL_5J7L_250 IL_04346.7 | |
| IL_6WNT_007 | 1/4/239:245, 1/4/253:258 | 7x6 Sarcin-Ricin; G-bulge Not in a motif group | geometric IL_5J7L_251 IL_76042.2 | |
| IL_6WNT_008 | 1/4/269:271, 1/4/366:370 | No text annotation Not in a motif group | geometric IL_5J7L_252 IL_47972.1 | |
| IL_6WNT_009 | 1/4/274:281, 1/4/359:363 | No text annotation Not in a motif group | ||
| IL_6WNT_010 | 1/4/293:295, 1/4/343:347 | No text annotation Not in a motif group | geometric IL_5J7L_254 IL_69440.1 | |
| IL_6WNT_011 | 1/4/481:484, 1/4/496:509 | No text annotation Not in a motif group | geometric IL_5J7L_255 IL_60992.6 | |
| IL_6WNT_012 | 1/4/536:539, 1/4/554:557 | Double sheared Not in a motif group | geometric IL_5J7L_256 IL_09705.10 | |
| IL_6WNT_013 | 1/4/564:566, 1/4/575:577 | No text annotation Not in a motif group | geometric IL_5J7L_257 IL_86319.2 | |
| IL_6WNT_014 | 1/4/606:610, 1/4/618:622 | AAA cross-strand stack Not in a motif group | geometric IL_5J7L_258 IL_17136.1 | |
| IL_6WNT_015 | 1/4/672:674, 1/4/806:808 | No text annotation Not in a motif group | geometric IL_5J7L_259 IL_86319.2 | |
| IL_6WNT_016 | 1/4/674:678, 1/4/799:806 | No text annotation Not in a motif group | geometric IL_7RQB_018 IL_17470.6 | |
| IL_6WNT_017 | 1/4/697:698, 1/4/763:765 | Single bulged A Not in a motif group | geometric IL_5J7L_261 IL_37497.6 | |
| IL_6WNT_018 | 1/4/702:703, 1/4/728:730 | Single bulged G Not in a motif group | geometric IL_7A0S_017 IL_00225.3 | |
| IL_6WNT_019 | 1/4/703:707, 1/4/724:728 | Triple sheared Not in a motif group | geometric IL_5J7L_263 IL_56467.8 | |
| IL_6WNT_020 | 1/4/738:740, 1/4/757:758 | Major groove platform Not in a motif group | geometric IL_4WF9_026 IL_27635.3 | |
| IL_6WNT_021 | 1/4/775:777, 1/4/787:791 | Multiple bulged bases Not in a motif group | geometric IL_5J7L_265 IL_90991.6 | |
| IL_6WNT_022 | 1/4/844:847, 1/4/933:934 | Other IL Not in a motif group | geometric IL_5J7L_267 IL_92001.1 | |
| IL_6WNT_023 | 1/4/847:848, 1/4/930:933 | Stack outside cWW Not in a motif group | geometric IL_5J7L_268 IL_37629.1 | |
| IL_6WNT_024 | 1/4/850:851, 1/4/926:928 | Single stack bend Not in a motif group | geometric IL_5J7L_269 IL_76488.4 | |
| IL_6WNT_025 | 1/4/856:862, 1/4/915:921 | 7x7 Sarcin-Ricin with intercalated A; G-bulge Not in a motif group | geometric IL_5J7L_270 IL_93830.3 | |
| IL_6WNT_026 | 1/4/862:864, 1/4/912:915 | Isolated non-canonical cWW with bulges Not in a motif group | geometric IL_5ML7_010 IL_43275.1 | |
| IL_6WNT_027 | 1/4/864:868, 1/4/909:912 | C-loop Not in a motif group | geometric IL_4V9F_051 IL_63596.6 | |
| IL_6WNT_028 | 1/4/870:872, 1/4/905:907 | UU cWW Not in a motif group | geometric IL_4E48_006 IL_86319.2 | |
| IL_6WNT_029 | 1/4/875:879, 1/4/898:902 | No text annotation Not in a motif group | ||
| IL_6WNT_030 | 1/4/879:882, 1/4/894:898 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_4V88_429 IL_30621.4 | |
| IL_6WNT_031 | 1/4/994:996, 1/4/1287:1288 | Single bulged C Not in a motif group | geometric IL_7RQB_035 IL_61258.12 | |
| IL_6WNT_032 | 1/4/998:1002, 1/4/1281:1285 | UAA/GAN Not in a motif group | geometric IL_4WF9_036 IL_89002.2 | |
| IL_6WNT_033 | 1/4/1004:1011, 1/4/1278:1279 | SSU/LSU pseudoknot Not in a motif group | geometric IL_5J7L_278 IL_15861.7 | |
| IL_6WNT_034 | 1/4/1011:1013, 1/4/1277:1278 | Single bulged U Not in a motif group | geometric IL_5J7L_279 IL_83039.16 | |
| IL_6WNT_035 | 1/4/1018:1024, 1/4/1268:1272 | No text annotation Not in a motif group | geometric IL_4WF9_039 IL_57188.3 | |
| IL_6WNT_036 | 1/4/1039:1047, 1/4/1137:1145 | Bacterial 5S Loop E Not in a motif group | geometric IL_1DFU_001 IL_56455.3 | |
| IL_6WNT_037 | 1/4/1083:1084, 1/4/1131:1133 | Major groove intercalation Not in a motif group | homologous IL_5J7L_355 IL_37497.6 | |
| IL_6WNT_038 | 1/4/1089:1094, 1/4/1122:1126 | No text annotation Not in a motif group | homologous IL_5J7L_356 IL_18472.2 | |
| IL_6WNT_039 | 1/4/1096:1097, 1/4/1117:1120 | Major groove minor groove platform; mini C-loop Not in a motif group | homologous IL_7RQB_113 IL_09061.8 | |
| IL_6WNT_040 | 1/4/1100:1104, 1/4/1110:1114 | Symmetric double minor groove platform Not in a motif group | geometric IL_5J7L_358 IL_58103.6 | |
| IL_6WNT_041 | 1/4/1159:1162, 1/4/1249:1251 | No text annotation Not in a motif group | homologous IL_5TBW_378 IL_86319.2 | |
| IL_6WNT_042 | 1/4/1166:1169, 1/4/1242:1245 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_5J7L_283 IL_30621.4 | |
| IL_6WNT_043 | 1/4/1171:1180, 1/4/1235:1240 | No text annotation Not in a motif group | ||
| IL_6WNT_044 | 1/4/1187:1190, 1/4/1204:1207 | No text annotation Not in a motif group | ||
| IL_6WNT_045 | 1/4/1215:1219, 1/4/1228:1230 | Major groove platform with extra cWW Not in a motif group | geometric IL_1MMS_002 IL_05564.2 | |
| IL_6WNT_046 | 1/4/1324:1326, 1/4/1375:1378 | Isolated cWS basepair Not in a motif group | geometric IL_5J7L_286 IL_52767.4 | |
| IL_6WNT_047 | 1/4/1330:1334, 1/4/1368:1371 | No text annotation Not in a motif group | geometric IL_5J7L_287 IL_91920.1 | |
| IL_6WNT_048 | 1/4/1336:1343, 1/4/1362:1366 | Kink-turn Not in a motif group | geometric IL_5J7L_288 IL_70923.2 | |
| IL_6WNT_049 | 1/4/1390:1397, 1/4/2139:2145 | 8x7 Sarcin-Ricin; G-bulge Not in a motif group | geometric IL_5J7L_289 IL_04346.7 | |
| IL_6WNT_050 | 1/4/1438:1441, 1/4/1731:1732 | Major groove platform; stack outside cWW Not in a motif group | geometric IL_7RQB_050 IL_50694.2 | |
| IL_6WNT_051 | 1/4/1447:1451, 1/4/1459:1461 | C-loop Not in a motif group | geometric IL_5J7L_291 IL_63596.6 | |
| IL_6WNT_052 | 1/4/1479:1483, 1/4/1504:1508 | UAA/GAN Not in a motif group | geometric IL_5J7L_292 IL_89002.2 | |
| IL_6WNT_053 | 1/4/1485:1489, 1/4/1498:1502 | tSH-tHW-tHS Not in a motif group | geometric IL_5J7L_293 IL_17136.1 | |
| IL_6WNT_054 | 1/4/1543:1544, 1/4/1710:1715 | No text annotation Not in a motif group | geometric IL_5J7L_294 IL_90348.1 | |
| IL_6WNT_055 | 1/4/1545:1549, 1/4/1705:1709 | UAA/GAN Not in a motif group | geometric IL_5J7L_295 IL_89002.2 | |
| IL_6WNT_056 | 1/4/1560:1563, 1/4/1685:1689 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_5J7L_296 IL_55178.1 | |
| IL_6WNT_057 | 1/4/1565:1568, 1/4/1679:1683 | tSH-tHW Not in a motif group | geometric IL_5J7L_297 IL_04059.1 | |
| IL_6WNT_058 | 1/4/1578:1579, 1/4/1587:1589 | Single bulged U Not in a motif group | geometric IL_5J7L_298 IL_83039.16 | |
| IL_6WNT_059 | 1/4/1596:1599, 1/4/1648:1652 | No text annotation Not in a motif group | geometric IL_5J7L_299 IL_68574.2 | |
| IL_6WNT_060 | 1/4/1602:1606, 1/4/1641:1645 | tSH-tHW-tHS Not in a motif group | geometric IL_5J7L_300 IL_38862.1 | |
| IL_6WNT_061 | 1/4/1609:1610, 1/4/1635:1638 | No text annotation Not in a motif group | geometric IL_5J7L_301 IL_67474.4 | |
| IL_6WNT_062 | 1/4/1617:1619, 1/4/1627:1628 | Single bulged A Not in a motif group | geometric IL_5J7L_302 IL_37497.6 | |
| IL_6WNT_063 | 1/4/1654:1658, 1/4/1669:1674 | Triple sheared related Not in a motif group | geometric IL_4V9F_018 IL_64879.2 | |
| IL_6WNT_064 | 1/4/1779:1784, 1/4/2132:2134 | No text annotation Not in a motif group | geometric IL_5J7L_304 IL_12566.2 | |
| IL_6WNT_065 | 1/4/1791:1793, 1/4/2123:2125 | Isolated tWW turn Not in a motif group | geometric IL_4WF9_063 IL_54997.7 | |
| IL_6WNT_066 | 1/4/1794:1797, 1/4/2121:2122 | Major groove platform; stack outside cWW Not in a motif group | geometric IL_7RQB_066 IL_50694.2 | |
| IL_6WNT_067 | 1/4/1797:1802, 1/4/2118:2121 | Intercalated tWH Not in a motif group | geometric IL_4WF9_065 IL_76273.1 | |
| IL_6WNT_068 | 1/4/1814:1819, 1/4/1824:1830 | tSH-tSH-tHH-tHS Not in a motif group | geometric IL_7RQB_068 IL_65969.2 | |
| IL_6WNT_069 | 1/4/1840:1846, 1/4/1870:1874 | tSH-tHW-tWW Not in a motif group | geometric IL_5J7L_022 IL_88269.3 | |
| IL_6WNT_070 | 1/4/1848:1852, 1/4/1864:1868 | Triple sheared Not in a motif group | geometric IL_5J7L_310 IL_56467.8 | |
| IL_6WNT_071 | 1/4/1898:1899, 1/4/2108:2110 | Single bulged A Not in a motif group | geometric IL_4WF9_068 IL_37497.6 | |
| IL_6WNT_072 | 1/4/1926:1932, 1/4/1941:1949 | Kink-turn related Not in a motif group | geometric IL_5J7L_313 IL_17069.3 | |
| IL_6WNT_073 | 1/4/1965:1968, 1/4/2030:2031 | Major groove outside cWW, minor groove, intercalation pocket Not in a motif group | geometric IL_5J7L_314 IL_88739.3 | |
| IL_6WNT_074 | 1/4/1969:1970, 1/4/2026:2029 | Multiple bulged bases Not in a motif group | geometric IL_5WLH_001 IL_44546.1 | |
| IL_6WNT_075 | 1/4/1974:1977, 1/4/2021:2022 | Major groove minor groove platform; mini C-loop Not in a motif group | geometric IL_4V9F_068 IL_95601.3 | |
| IL_6WNT_076 | 1/4/1992:1995, 1/4/2002:2006 | UAA/GAN related Not in a motif group | geometric IL_5J7L_317 IL_77691.2 | |
| IL_6WNT_077 | 1/4/2061:2062, 1/4/2092:2095 | Multiple bulged bases Not in a motif group | geometric IL_5J7L_318 IL_59677.2 | |
| IL_6WNT_078 | 1/4/2062:2073, 1/4/2089:2092 | No text annotation Not in a motif group | geometric IL_4WF9_077 IL_81589.2 | |
| IL_6WNT_079 | 1/4/2178:2180, 1/4/2745:2746 | Major groove platform Not in a motif group | geometric IL_5J7L_320 IL_27635.3 | |
| IL_6WNT_080 | 1/4/2182:2184, 1/4/2740:2743 | No text annotation Not in a motif group | ||
| IL_6WNT_081 | 1/4/2195:2197, 1/4/2570:2571 | Single bulged U Not in a motif group | geometric IL_7RQB_080 IL_83039.16 | |
| IL_6WNT_082 | 1/4/2198:2199, 1/4/2566:2569 | Minor groove platform Not in a motif group | geometric IL_4V9F_075 IL_42622.4 | |
| IL_6WNT_083 | 1/4/2209:2211, 1/4/2364:2367 | Isolated tHS basepair with bulges Not in a motif group | geometric IL_5J7L_325 IL_38958.7 | |
| IL_6WNT_084 | 1/4/2213:2215, 1/4/2360:2362 | No text annotation Not in a motif group | geometric IL_5J7L_326 IL_86319.2 | |
| IL_6WNT_085 | 1/4/2230:2233, 1/4/2312:2315 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_3TZR_003 IL_30621.4 | |
| IL_6WNT_086 | 1/4/2233:2249, 1/4/2305:2312 | No text annotation Not in a motif group | ||
| IL_6WNT_087 | 1/4/2330:2332, 1/4/2348:2349 | Single bulged U Not in a motif group | geometric IL_5J7L_331 IL_83039.16 | |
| IL_6WNT_088 | 1/4/2478:2481, 1/4/2492:2495 | Double sheared Not in a motif group | geometric IL_5J7L_333 IL_09705.10 | |
| IL_6WNT_089 | 1/4/2529:2531, 1/4/2542:2543 | No text annotation Not in a motif group | ||
| IL_6WNT_090 | 1/4/2594:2598, 1/4/2608:2612 | Triple sheared Not in a motif group | geometric IL_5J7L_274 IL_56467.8 | |
| IL_6WNT_091 | 1/4/2635:2636, 1/4/2708:2710 | Major groove platform Not in a motif group | geometric IL_4OQU_002 IL_27635.3 | |
| IL_6WNT_092 | 1/4/2638:2640, 1/4/2702:2706 | Isolated non-canonical cWW with bulges Not in a motif group | geometric IL_5J7L_340 IL_90933.2 | |
| IL_6WNT_093 | 1/4/2640:2641, 1/4/2699:2702 | No text annotation Not in a motif group | geometric IL_5J7L_341 IL_71530.2 | |
| IL_6WNT_094 | 1/4/2650:2651, 1/4/2668:2671 | Minor groove platform with intercalation Not in a motif group | geometric IL_5J7L_342 IL_95601.3 | |
| IL_6WNT_095 | 1/4/2719:2720, 1/4/2729:2731 | No text annotation Not in a motif group | ||
| IL_6WNT_096 | 1/4/2764:2768, 1/4/2902:2910 | No text annotation Not in a motif group | geometric IL_5J7L_345 IL_04638.1 | |
| IL_6WNT_097 | 1/4/2780:2786, 1/4/2791:2796 | Sarcin-Ricin target in LSU H95; G-bulge Not in a motif group | geometric IL_7RQB_103 IL_16458.1 | |
| IL_6WNT_098 | 1/4/2808:2812, 1/4/2853:2855 | C-loop Not in a motif group | geometric IL_5J7L_347 IL_63596.6 | |
| IL_6WNT_099 | 1/4/2815:2819, 1/4/2846:2850 | No text annotation Not in a motif group | geometric IL_5J7L_348 IL_08296.3 | |
| IL_6WNT_100 | 1/4/2823:2824, 1/4/2839:2842 | Multiple bulged bases Not in a motif group | geometric IL_5J7L_349 IL_71530.2 | |
| IL_6WNT_101 | 1/4/2865:2870, 1/4/2890:2895 | UAA/GAN with extra cWW Not in a motif group | geometric IL_5J7L_350 IL_49767.5 | |
| IL_6WNT_102 | 1/4/2934:2939, 1/4/3017:3020 | No text annotation Not in a motif group | geometric IL_5J7L_351 IL_49460.2 | |
| IL_6WNT_103 | 1/4/2966:2967, 1/4/3006:3008 | Major groove intercalation Not in a motif group | geometric IL_4WF9_112 IL_37497.6 | |
| IL_6WNT_104 | 1/4/2971:2974, 1/4/2998:3002 | Multiple bulged bases with non-canonical cWW Not in a motif group | geometric IL_5J7L_353 IL_58764.3 | |
| IL_6WNT_105 | 1/4/2975:2980, 1/4/2993:2997 | No text annotation Not in a motif group | geometric IL_5J7L_354 IL_83162.5 |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J3_6WNT_001 | 1/4/30:31, 1/4/474:481, 1/4/509:510 | No text annotation Not in a motif group | ||
| J3_6WNT_002 | 1/4/56:57, 1/4/70:76, 1/4/110:114 | No text annotation Not in a motif group | ||
| J3_6WNT_003 | 1/4/683:689, 1/4/773:775, 1/4/791:794 | No text annotation Not in a motif group | ||
| J3_6WNT_004 | 1/4/698:700, 1/4/732:736, 1/4/760:763 | No text annotation Not in a motif group | ||
| J3_6WNT_005 | 1/4/1048:1052, 1/4/1076:1082, 1/4/1134:1136 | No text annotation Not in a motif group | ||
| J3_6WNT_006 | 1/4/1183:1187, 1/4/1207:1215, 1/4/1230:1232 | No text annotation Not in a motif group | ||
| J3_6WNT_007 | 1/4/1426:1431, 1/4/1753:1755, 1/4/1767:1770 | No text annotation Not in a motif group | ||
| J3_6WNT_008 | 1/4/1434:1437, 1/4/1733:1739, 1/4/1748:1750 | No text annotation Not in a motif group | ||
| J3_6WNT_009 | 1/4/1472:1477, 1/4/1510:1513, 1/4/1530:1531 | No text annotation Not in a motif group | ||
| J3_6WNT_010 | 1/4/2219:2221, 1/4/2324:2328, 1/4/2351:2356 | No text annotation Not in a motif group | ||
| J3_6WNT_011 | 1/4/2423:2427, 1/4/2445:2451, 1/4/2460:2465 | No text annotation Not in a motif group | ||
| J3_6WNT_012 | 1/4/2645:2648, 1/4/2673:2675, 1/4/2689:2695 | No text annotation Not in a motif group | ||
| J3_6WNT_013 | 1/4/2917:2919, 1/4/2933:2934, 1/4/3020:3022 | No text annotation Not in a motif group | ||
| J3_6WNT_014 | 1/4/2940:2943, 1/4/2959:2964, 1/4/3010:3016 | No text annotation Not in a motif group |
Problematic loops
No problematic loops
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