#Varna 2DMotifNum NtsInstances
1
  • IL_86319.3
IL_86319.3
  • Basepair signature: cWW-cWW-cWW
  • History status: Updated, 1 parent
  • UU cWW (6)
  • CC cWW (5)
  • CA cWW (3)
  • Isolated cWH basepair (3)
  • Self complementary (2)
  • AA cWW (2)
  • UU cWW water inserted (1)
  • Isolated near basepair (1)
  • UG cWW (1)
  • CA cWW with bulged A (1)
  • 6269
    2
    • IL_37497.7
    IL_37497.7
    • Basepair signature: cWW-L-cWW
    • History status: Updated, 1 parent
  • Single bulged A (81)
  • Major groove intercalation (3)
  • 5120
    3
    • IL_83039.17
    IL_83039.17
    • Basepair signature: cWW-L-cWW
    • History status: Updated, 1 parent
  • Single bulged U (79)
  • 5117
    4
    • IL_70707.3
    IL_70707.3
    • Basepair signature: cWW-cHW-cWW
    • History status: Updated, 2 parents
  • Isolated cWH basepair (35)
  • UU cWW (2)
  • cWH basepair with bulged bases (1)
  • UC cWW (1)
  • Multiple bulged bases, near cWW (1)
  • 670
    5
    • IL_30621.4
    IL_30621.4
    • Basepair signature: cWW-cWW-cWW-cWW
    • History status: Exact match
  • Tandem non-canonical cWW pairs (47)
  • Self complementary (1)
  • 866
    6
    • IL_00225.4
    IL_00225.4
    • Basepair signature: cWW-L-cWW
    • History status: Updated, 1 parent
  • Single bulged G (31)
  • Stack outside cWW (1)
  • 542
    7
    • IL_61258.13
    IL_61258.13
    • Basepair signature: cWW-L-cWW
    • History status: Updated, 1 parent
  • Single bulged C (31)
  • 540
    8
    • IL_27635.4
    IL_27635.4
    • Basepair signature: cWW-cSH-cWW
    • History status: Updated, 1 parent
  • Major groove platform (29)
  • Major groove platform; stack outside cWW (1)
  • 538
    9
    • IL_16396.3
    IL_16396.3
    • Basepair signature: cWW-cWW
    • History status: Updated, 2 parents
  • Multiple bulged bases (13)
  • Major groove outside cWW, minor groove, intercalation pocket (5)
  • Stack outside cWW (3)
  • Basepair outside cWW (3)
  • Major groove platform outside cWW (2)
  • Major groove intercalation (2)
  • Major groove outside cWW, intercalation pocket (1)
  • 438
    10
    • IL_76488.5
    IL_76488.5
    • Basepair signature: cWW-L-cWW
    • History status: Updated, 1 parent
  • Single stack bend (23)
  • Not an internal loop (1)
  • Single stack bend with bulge (1)
  • 536
    11
    • IL_42622.5
    IL_42622.5
    • Basepair signature: cWW-cSH-tHS-cWW
    • History status: Updated, 1 parent
  • Minor groove platform (24)
  • Multiple bulged bases (1)
  • 533
    12
    • IL_09705.11
    IL_09705.11
    • Basepair signature: cWW-tSH-tHS-cWW
    • History status: Updated, 1 parent
  • Double sheared (22)
  • tWS-tSW (1)
  • 833
    13
    • IL_43275.2
    IL_43275.2
    • Basepair signature: cWW-cWW-cWW
    • History status: Updated, 1 parent
  • Isolated non-canonical cWW with bulges (16)
  • Single bulged G, near cWW (1)
  • Self complementary (1)
  • 630
    14
    • IL_70923.3
    IL_70923.3
    • Basepair signature: cWW-tSS-tSH-L-tHS-tHS-cWW
    • History status: Updated, 1 parent
  • Kink-turn (17)
  • 1228
    15
    • IL_52767.5
    IL_52767.5
    • Basepair signature: cWW-L-R-cWW
    • History status: Updated, 1 parent
  • Isolated cWS basepair (8)
  • Isolated near basepair (6)
  • Self complementary (1)
  • Single bulged G, near cWW (1)
  • 628
    16
    • IL_56467.9
    IL_56467.9
    • Basepair signature: cWW-tSH-tSH-tHS-cWW
    • History status: Updated, 1 parent
  • Triple sheared (22)
  • 1028
    17
    • IL_50694.3
    IL_50694.3
    • Basepair signature: cWW-tSH-cWW-L
    • History status: Updated, 1 parent
  • Major groove platform; stack outside cWW (24)
  • 627
    18
    • IL_17136.2
    IL_17136.2
    • Basepair signature: cWW-tSH-tHW-tHS-cWW
    • History status: Updated, 1 parent
  • tSH-tHW-tHS (12)
  • AAA cross-strand stack (4)
  • UAA/GAN variation (1)
  • UAA/GAN related (1)
  • 1022
    19
    • IL_89002.3
    IL_89002.3
    • Basepair signature: cWW-tWH-R-L-tHS-cWW
    • History status: Updated, 1 parent
  • UAA/GAN (13)
  • 920
    20
    • IL_59677.3
    IL_59677.3
    • Basepair signature: cWW-cWW
    • History status: Updated, 1 parent
  • Multiple bulged bases (7)
  • 419
    21
    • IL_64417.2
    IL_64417.2
    • Basepair signature: cWW-L-cWW
    • History status: Exact match
  • Decoding loop related (12)
  • Stack and bulge (2)
  • Intercalated cWW (2)
  • Not an internal loop (1)
  • 518
    22
    • IL_45067.3
    IL_45067.3
    • Basepair signature: cWW-tSS-L-tSH-L-R-R-cWW-L
    • History status: Updated, 1 parent
  • Kink-turn (11)
  • Kink-turn with non-sequential stacking (5)
  • 1218
    23
    • IL_80097.2
    IL_80097.2
    • Basepair signature: cWW-tHS-cWW
    • History status: Updated, 1 parent
  • Minor groove platform (12)
  • Not an internal loop (1)
  • 517
    24
    • IL_04346.8
    IL_04346.8
    • Basepair signature: cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW
    • History status: Updated, 1 parent
  • 8x7 Sarcin-Ricin; G-bulge (11)
  • 1515
    25
    • IL_38958.8
    IL_38958.8
    • Basepair signature: cWW-tHS-cWW
    • History status: Updated, 1 parent
  • Isolated tHS basepair with bulges (10)
  • 615
    26
    • IL_45612.4
    IL_45612.4
    • Basepair signature: cWW-L-R-L-cWW
    • History status: Updated, 1 parent
    714
    27
    • IL_71530.3
    IL_71530.3
    • Basepair signature: cWW-cWW
    • History status: Updated, 1 parent
  • Multiple bulged bases (8)
  • 414
    28
    • IL_63596.7
    IL_63596.7
    • Basepair signature: cWW-cWS-cSH-tWH-cWW-L
    • History status: Updated, 1 parent
  • C-loop (11)
  • 714
    29
    • IL_09061.9
    IL_09061.9
    • Basepair signature: cWW-cWS-cSH-cWW
    • History status: Updated, 1 parent
  • Major groove minor groove platform; mini C-loop (12)
  • 614
    30
    • IL_05564.3
    IL_05564.3
    • Basepair signature: cWW-cSH-cWW-cWW
    • History status: Updated, 1 parent
  • Major groove platform with extra cWW (7)
  • 714
    31
    • IL_92788.3
    IL_92788.3
    • Basepair signature: cWW-L-R-L-cWW-L
    • History status: Updated, 1 parent
  • Major groove minor groove platform with extra cWW (6)
  • Isolated basepair with bulged bases (3)
  • Minor groove platform with extra cWW (1)
  • 714
    32
    • IL_76273.2
    IL_76273.2
    • Basepair signature: cWW-L-R-cWW
    • History status: Updated, 1 parent
  • Intercalated tWH (5)
  • 614
    33
    • IL_05145.3
    IL_05145.3
    • Basepair signature: cWW-cWW-cWW-cWW-cWW
    • History status: Updated, 1 parent
  • Other IL (1)
  • 1013
    34
    • IL_04059.2
    IL_04059.2
    • Basepair signature: cWW-tWH-tHS-cWW
    • History status: Updated, 1 parent
  • tSH-tHW (9)
  • Other IL (1)
  • 813
    35
    • IL_15861.8
    IL_15861.8
    • Basepair signature: cWW-L-cWW-L-L-R-cSH
    • History status: Updated, 1 parent
  • SSU/LSU pseudoknot (9)
  • 1012
    36
    • IL_53448.1
    IL_53448.1
    • Basepair signature: cWW-tWH-cSH-cWW
    • History status: Exact match
  • Receptor of 11-nt loop-receptor motif (11)
  • 811
    37
    • IL_90933.3
    IL_90933.3
    • Basepair signature: cWW-cWW-cWW
    • History status: Updated, 1 parent
  • Isolated non-canonical cWW with bulges (7)
  • Isolated basepair with bulged bases (1)
  • 611
    38
    • IL_27844.2
    IL_27844.2
    • Basepair signature: cWW-L-R-cWW
    • History status: Exact match
  • Decoding loop related (1)
  • Decoding loop with one bulged A (1)
  • Other IL (1)
  • 611
    39
    • IL_88739.4
    IL_88739.4
    • Basepair signature: cWW-L-cWW
    • History status: Updated, 1 parent
  • Major groove outside cWW, minor groove, intercalation pocket (6)
  • Major groove minor groove platform; mini C-loop (1)
  • 511
    40
    • IL_71110.1
    IL_71110.1
    • Basepair signature: cWW-cWW-L-R-cWW
    • History status: Exact match
  • Tandem non-canonical cWW pairs (8)
  • Other IL (1)
  • 810
    41
    • IL_58764.4
    IL_58764.4
    • Basepair signature: cWW-cWW-L-R-L-cWW
    • History status: Updated, 1 parent
  • Minor groove platform related (3)
  • Tandem non-canonical cWW pairs (2)
  • UAA/GAN variation (1)
  • Multiple bulged bases with non-canonical cWW (1)
  • 910
    42
    • IL_92001.2
    IL_92001.2
    • Basepair signature: cWW-L-cWW
    • History status: Updated, 1 parent
  • Single stack bend (6)
  • Single base bend (1)
  • Other IL (1)
  • 510
    43
    • IL_76223.3
    IL_76223.3
    • Basepair signature: cWW-cHH-cWW
    • History status: Updated, 1 parent
  • Major groove platform (6)
  • Other IL (1)
  • 510
    44
    • IL_95601.4
    IL_95601.4
    • Basepair signature: cWW-tSH-cWW
    • History status: Updated, 1 parent
  • Minor groove platform with intercalation (5)
  • Minor groove platform (1)
  • Major groove minor groove platform; mini C-loop (1)
  • 510
    45
    • IL_07235.2
    IL_07235.2
    • Basepair signature: cWW-tSH-L-tHS-cWW
    • History status: Updated, 1 parent
  • UAA/GAN variation (3)
  • UAA/GAN (2)
  • 99
    46
    • IL_93341.1
    IL_93341.1
    • Basepair signature: cWW-cWW-cSH-cSH-cWW
    • History status: Exact match
  • 8-nt loop receptor (5)
  • 89
    47
    • IL_77691.2
    IL_77691.2
    • Basepair signature: cWW-tSH-tHS-L-cWW
    • History status: Exact match
  • UAA/GAN related (5)
  • UAA/GAN (1)
  • 99
    48
    • IL_19389.6
    IL_19389.6
    • Basepair signature: cWW-L-cWW-cSH
    • History status: Exact match
  • Major groove platform with intercalated tWH (5)
  • Other IL (1)
  • 69
    49
    • IL_67743.1
    IL_67743.1
    • Basepair signature: cWW-cWW-cWH-cWW
    • History status: Exact match
  • Tandem non-canonical cWW pairs (3)
  • 89
    50
    • IL_44546.2
    IL_44546.2
    • Basepair signature: cWW-cWW
    • History status: Updated, 1 parent
  • Multiple bulged bases (5)
  • 49
    51
    • IL_76042.3
    IL_76042.3
    • Basepair signature: cWW-tSH-tHH-cSH-tWH-tHS-cWW
    • History status: Updated, 1 parent
  • 7x6 Sarcin-Ricin; G-bulge (6)
  • Sarcin-Ricin target in LSU H95; G-bulge (1)
  • 139
    52
    • IL_38186.1
    IL_38186.1
    • Basepair signature: cWW-cWW
    • History status: New id, 1 parent
  • Major groove outside cWW, minor groove, intercalation pocket (2)
  • Single bulged A (1)
  • 49
    53
    • IL_51265.2
    IL_51265.2
    • Basepair signature: cWW-tSS-tSH-L-tHS-cWW
    • History status: Exact match
  • Kink-turn from U4 (5)
  • Kink-turn (3)
  • Kink-turn from T-box riboswitch (1)
  • 109
    54
    • IL_54997.8
    IL_54997.8
    • Basepair signature: cWW-tWW-cWW
    • History status: Updated, 1 parent
  • Isolated tWW turn (5)
  • 68
    55
    • IL_63450.3
    IL_63450.3
    • Basepair signature: cWW-cWW-cSH-cWW
    • History status: Updated, 1 parent
  • Major groove platform with extra pair (3)
  • 78
    56
    • IL_76389.1
    IL_76389.1
    • Basepair signature: cWW-cWW
    • History status: Exact match
  • Multiple bulged bases (7)
  • Intercalation pocket (1)
  • 48
    57
    • IL_58103.7
    IL_58103.7
    • Basepair signature: cWW-cWS-L-tSW-L-R-R-cWW
    • History status: Updated, 1 parent
  • Symmetric double minor groove platform (5)
  • Minor groove platform (1)
  • 88
    58
    • IL_90802.1
    IL_90802.1
    • Basepair signature: cWW-cWW-cWW-cWW
    • History status: Exact match
  • Tandem non-canonical cWW pairs (7)
  • 88
    59
    • IL_65969.3
    IL_65969.3
    • Basepair signature: cWW-tSH-tSH-tHH-tHS-cWW
    • History status: Updated, 1 parent
  • tSH-tSH-tHH-tHS (4)
  • 128
    60
    • IL_04668.2
    IL_04668.2
    • Basepair signature: cWW-cWW-cWW-L-R-L-R-cWW
    • History status: Exact match
  • Other IL (1)
  • Tandem non-canonical cWW pairs with near WC pairs (1)
  • 128
    61
    • IL_75255.1
    IL_75255.1
    • Basepair signature: cWW-cSH-cWS-cSH-tWH-cWW
    • History status: Exact match
  • C-loop (5)
  • 78
    62
    • IL_73886.1
    IL_73886.1
    • Basepair signature: cWW-cWW
    • History status: Exact match
  • Basepair outside cWW, intercalation pocket (5)
  • 48
    63
    • IL_17470.7
    IL_17470.7
    • Basepair signature: cWW-tWW-L-R-tWH-L-cWW
    • History status: Updated, 1 parent
  • tHW-tHW cross-strand stack (3)
  • 117
    64
    • IL_07486.2
    IL_07486.2
    • Basepair signature: cWW-tSS-tSH-L-tHS-cWW-cWW
    • History status: Exact match
  • Kink-turn (5)
  • 127
    65
    • IL_48100.2
    IL_48100.2
    • Basepair signature: cWW-L-cWW
    • History status: Exact match
  • 180 degree turn (1)
  • 57
    66
    • IL_66414.7
    IL_66414.7
    • Basepair signature: cWW-L-R-tSH-tSH-tHS-cWW-cWW
    • History status: Updated, 1 parent
  • Triple sheared with non-canonical cWW (5)
  • 147
    67
    • IL_90991.7
    IL_90991.7
    • Basepair signature: cWW-cWW
    • History status: Updated, 1 parent
  • Multiple bulged bases (5)
  • 47
    68
    • IL_16458.2
    IL_16458.2
    • Basepair signature: cWW-L-R-L-R-cSH-tWH-tHS-cWW
    • History status: Updated, 1 parent
  • Sarcin-Ricin target in LSU H95; G-bulge (3)
  • 7x6 Sarcin-Ricin with UU cWW pair; G-bulge (1)
  • 8x6 Sarcin-Ricin with inserted A; G-bulge (1)
  • 7x6 Sarcin-Ricin; G-bulge (1)
  • 137
    69
    • IL_37712.2
    IL_37712.2
    • Basepair signature: cWW-L-cWW-L-L
    • History status: Exact match
  • C-loop (4)
  • Major groove minor groove platform with tHH (2)
  • 77
    70
    • IL_15052.1
    IL_15052.1
    • Basepair signature: cWW-cSH-cWS-cWW
    • History status: Exact match
  • Minor groove platform (7)
  • 67
    71
    • IL_83162.6
    IL_83162.6
    • Basepair signature: cWW-tSH-L-tHH-L-cWW
    • History status: Updated, 1 parent
    107
    72
    • IL_76308.4
    IL_76308.4
    • Basepair signature: cWW-tSH-tHW-L-R-cWW-cWW
    • History status: Exact match
  • tSH-tHW-tHS-cWW (5)
  • Tandem non-canonical cWW pairs with near WC pairs (1)
  • 126
    73
    • IL_04650.1
    IL_04650.1
    • Basepair signature: cWW-cSH-cWW-L-L-R-L
    • History status: Exact match
  • Minor groove platform (2)
  • 96
    74
    • IL_90538.5
    IL_90538.5
    • Basepair signature: cWW-tSS-tSS-tSH-L-tHS-R-cWW-L-L
    • History status: Updated, 1 parent
  • Kink-turn (4)
  • 136
    75
    • IL_23164.1
    IL_23164.1
    • Basepair signature: cWW-L-R-L-cWW
    • History status: Exact match
    76
    76
    • IL_58686.2
    IL_58686.2
    • Basepair signature: cWW-cWW-L-R-cSH-cWW
    • History status: Exact match
  • Multiple bulged bases with near cWW (1)
  • 96
    77
    • IL_60992.7
    IL_60992.7
    • Basepair signature: cWW-cWS-tSH-L-tHH-tWH-cWW-tSS-tSH-L-L
    • History status: Updated, 1 parent
    166
    78
    • IL_88375.1
    IL_88375.1
    • Basepair signature: cWW-cWW
    • History status: New id, 2 parents
  • Multiple bulged bases (3)
  • Minor groove platform (1)
  • Major groove outside cWW, minor groove, intercalation pocket (1)
  • 46
    79
    • IL_02284.7
    IL_02284.7
    • Basepair signature: cWW-L-cWW
    • History status: Exact match
  • Decoding loop related (2)
  • 56
    80
    • IL_46796.2
    IL_46796.2
    • Basepair signature: cWW-tHS-cWW-cWW
    • History status: Updated, 1 parent
  • Minor groove platform with extra cWW (1)
  • 76
    81
    • IL_56455.4
    IL_56455.4
    • Basepair signature: cWW-tSH-tHW-L-R-L-R-L-R-tWH-tHS-cWW
    • History status: Updated, 1 parent
  • Bacterial 5S Loop E (5)
  • 186
    82
    • IL_25186.1
    IL_25186.1
    • Basepair signature: cWW-L-R-L-R-cWW-cWW
    • History status: Exact match
    106
    83
    • IL_54678.5
    IL_54678.5
    • Basepair signature: cWW-cWW
    • History status: Exact match
  • Minor groove platform with intercalation (1)
  • 45
    84
    • IL_65006.1
    IL_65006.1
    • Basepair signature: cWW-L-cWW-cWW
    • History status: Exact match
  • Minor groove platform with extra cWW (3)
  • 75
    85
    • IL_65510.1
    IL_65510.1
    • Basepair signature: cWW-L-cWW-L-L-R-L
    • History status: Exact match
    95
    86
    • IL_69145.1
    IL_69145.1
    • Basepair signature: cWW-L-cWW-L
    • History status: Exact match
  • Pseudoknot (3)
  • 65
    87
    • IL_04638.2
    IL_04638.2
    • Basepair signature: cWW-tSH-tHW-tHS-cSH-cWW-L
    • History status: Updated, 1 parent
  • tSH-tHS-tHW (2)
  • 135
    88
    • IL_80604.2
    IL_80604.2
    • Basepair signature: cWW-cWW-tWH-tWH-tHW-tHW-cWW
    • History status: Exact match
  • tWH-tWH-tHW-tHW (3)
  • 145
    89
    • IL_19954.2
    IL_19954.2
    • Basepair signature: cWW-tSH-tSH-tHS-cWW-cWW
    • History status: Exact match
    125
    90
    • IL_69265.1
    IL_69265.1
    • Basepair signature: cWW-L-R-L-R-cWW
    • History status: New id, 2 parents
  • Decoding loop related (1)
  • Other IL (1)
  • 85
    91
    • IL_45944.3
    IL_45944.3
    • Basepair signature: cWW-L-cWW-L-tWH-L-R-L
    • History status: Exact match
    115
    92
    • IL_73028.1
    IL_73028.1
    • Basepair signature: cWW-cWW-cWW
    • History status: Exact match
    65
    93
    • IL_58502.1
    IL_58502.1
    • Basepair signature: cWW-cWW-L-R-L-cWW
    • History status: Exact match
  • Major groove platform with intercalation (1)
  • 95
    94
    • IL_12566.3
    IL_12566.3
    • Basepair signature: cWW-L-tHS-L-cWW-L
    • History status: Updated, 1 parent
    95
    95
    • IL_16386.1
    IL_16386.1
    • Basepair signature: cWW-L-cWW
    • History status: Exact match
  • Intercalated cWS (1)
  • 55
    96
    • IL_23544.2
    IL_23544.2
    • Basepair signature: cWW-L-R-L-cWW
    • History status: Exact match
    75
    97
    • IL_81589.2
    IL_81589.2
    • Basepair signature: cWW-L-R-cHW-cWW-L-L-tSW-L
    • History status: Exact match
    135
    98
    • IL_49767.6
    IL_49767.6
    • Basepair signature: cWW-cWW-tWH-L-tHS-cWW
    • History status: Updated, 1 parent
  • UAA/GAN with extra cWW (4)
  • 115
    99
    • IL_21270.1
    IL_21270.1
    • Basepair signature: cWW-tSH-cWS-cWW
    • History status: Exact match
  • Other IL (1)
  • tSH-tHW (1)
  • 85
    100
    • IL_47078.1
    IL_47078.1
    • Basepair signature: cWW-cWS-L-cWW-L
    • History status: Exact match
  • Minor groove platform (5)
  • 75
    101
    • IL_02509.2
    IL_02509.2
    • Basepair signature: cWW-tSW-cWS-cSH-tWH-R-R-cWW
    • History status: Updated, 1 parent
  • C-loop (3)
  • 95
    102
    • IL_17069.4
    IL_17069.4
    • Basepair signature: cWW-tSH-tHH-cSS-tWW-tHH-tSS-cWW
    • History status: Updated, 1 parent
  • Kink-turn related (4)
  • 135
    103
    • IL_62552.1
    IL_62552.1
    • Basepair signature: cWW-L-cWW-L-L-R-L
    • History status: Exact match
    95
    104
    • IL_47263.2
    IL_47263.2
    • Basepair signature: cWW-tSH-cSH-cWW
    • History status: Exact match
  • Major groove platform with extra pair (5)
  • 75
    105
    • IL_57188.4
    IL_57188.4
    • Basepair signature: cWW-cSH-tWW-L-tWW-cWW-cSH
    • History status: Updated, 1 parent
    115
    106
    • IL_30542.3
    IL_30542.3
    • Basepair signature: cWW-L-R-L-cWW-L
    • History status: Exact match
    84
    107
    • IL_76319.2
    IL_76319.2
    • Basepair signature: cWW-L-cWS-cWW
    • History status: Exact match
  • Isolated cWS basepair (2)
  • 74
    108
    • IL_38862.2
    IL_38862.2
    • Basepair signature: cWW-cSH-tSH-tWH-tHS-cWW
    • History status: Updated, 1 parent
  • tSH-tHW-tHS (2)
  • 5x5 Sarcin-Ricin with intercalated A; G-bulge (1)
  • 104
    109
    • IL_65653.1
    IL_65653.1
    • Basepair signature: cWW-tSW-tHW-tWW-tWH-cSH-L-L-tHS-L-cWW-L
    • History status: Exact match
    174
    110
    • IL_18471.2
    IL_18471.2
    • Basepair signature: cWW-cSH-cWW-cWW
    • History status: Exact match
  • Major groove platform with extra cWW (2)
  • 74
    111
    • IL_74697.2
    IL_74697.2
    • Basepair signature: cWW-cWW-L-R-L-cWW
    • History status: Exact match
  • Decoding loop related (1)
  • 94
    112
    • IL_04655.1
    IL_04655.1
    • Basepair signature: cWW-L-R-L-cWW
    • History status: Exact match
    74
    113
    • IL_55178.1
    IL_55178.1
    • Basepair signature: cWW-cWW-tWW-cWW
    • History status: Exact match
  • tWW and non-canonical cWW (1)
  • Tandem non-canonical cWW pairs (1)
  • Non canonical cWW and near pair (1)
  • tWW and near cWH (1)
  • 84
    114
    • IL_08296.4
    IL_08296.4
    • Basepair signature: cWW-L-tHS-L-cWW
    • History status: Updated, 1 parent
    84
    115
    • IL_49460.2
    IL_49460.2
    • Basepair signature: cWW-L-R-L-R-L-cWW-L
    • History status: Exact match
    104
    116
    • IL_93630.2
    IL_93630.2
    • Basepair signature: cWW-L-R-L-cWW-L-L
    • History status: Exact match
  • C-loop with extra cWW pair (1)
  • 94
    117
    • IL_88269.3
    IL_88269.3
    • Basepair signature: cWW-L-R-cSH-tWH-tHS-cWW
    • History status: Exact match
  • 6x5 Sarcin-Ricin; G-bulge (3)
  • tSH-tHW-tWW (1)
  • 114
    118
    • IL_44312.2
    IL_44312.2
    • Basepair signature: cWW-tWH-R-cSH-cWW
    • History status: Exact match
  • Receptor of 11-nt loop-receptor motif (2)
  • 94
    119
    • IL_97697.1
    IL_97697.1
    • Basepair signature: cWW-L-R-L-R-L-cWW-L-L
    • History status: Exact match
  • Reverse turn (4)
  • 114
    120
    • IL_55953.3
    IL_55953.3
    • Basepair signature: cWW-tSH-tHS-R-L-L-R-cWW
    • History status: Exact match
    124
    121
    • IL_93830.3
    IL_93830.3
    • Basepair signature: cWW-cWW-L-R-cSH-R-tWH-tHS-cWW
    • History status: Exact match
  • 7x7 Sarcin-Ricin with intercalated A; G-bulge (3)
  • 144
    122
    • IL_50715.2
    IL_50715.2
    • Basepair signature: cWW-tSH-tHH-L-R-L-R-cSH-tWW-cWW-L-L-L-R-L
    • History status: Updated, 1 parent
    214
    123
    • IL_75461.4
    IL_75461.4
    • Basepair signature: cWW-L-R-L-cWW
    • History status: Exact match
    74
    124
    • IL_33912.1
    IL_33912.1
    • Basepair signature: cWW-L-R-L-cWW-L
    • History status: Exact match
    84
    125
    • IL_68506.1
    IL_68506.1
    • Basepair signature: cWW-cWW-tSH-tHW-tHW-L-R-L-cWW-cWW
    • History status: Exact match
    174
    126
    • IL_24606.2
    IL_24606.2
    • Basepair signature: cWW-tSH-tHH-cSH-tWH-tHS-cWW-L
    • History status: Exact match
  • 8x6 Sarcin-Ricin with inserted Y; G-bulge (3)
  • 144
    127
    • IL_19557.3
    IL_19557.3
    • Basepair signature: cWW-L-cWW
    • History status: Exact match
  • Isolated cWH basepair (1)
  • 54
    128
    • IL_29346.1
    IL_29346.1
    • Basepair signature: cWW-L-cWW-L-L
    • History status: Exact match
  • Left turn (3)
  • 74
    129
    • IL_06136.1
    IL_06136.1
    • Basepair signature: cWW-tSH-tSH-tHS-tHS-cWW
    • History status: Exact match
  • Quadruple sheared (4)
  • 124
    130
    • IL_90318.2
    IL_90318.2
    • Basepair signature: cWW-tSH-L-R-L-R-cWW
    • History status: Updated, 1 parent
  • UAA/GAN with extra pair (2)
  • 103
    131
    • IL_47298.1
    IL_47298.1
    • Basepair signature: cWW-L-R-L-cWW
    • History status: Exact match
    73
    132
    • IL_42334.1
    IL_42334.1
    • Basepair signature: cWW-L-R-L-R-cWW
    • History status: Exact match
  • Tandem non-canonical cWW pairs (1)
  • Non canonical cWW and near pair (1)
  • 83
    133
    • IL_26728.2
    IL_26728.2
    • Basepair signature: cWW-cSH-R-cSH-cWW-cWW
    • History status: Exact match
    93
    134
    • IL_87284.1
    IL_87284.1
    • Basepair signature: cWW-tSH-tHW-tWH-tHS-cWW
    • History status: Exact match
  • tSH-tHW-tWH-tHS (3)
  • 123
    135
    • IL_96141.2
    IL_96141.2
    • Basepair signature: cWW-tSH-tHS-L-R-cWW
    • History status: Updated, 2 parents
  • Triple sheared (2)
  • tSH-tHS-tWS (1)
  • 103
    136
    • IL_35728.2
    IL_35728.2
    • Basepair signature: cWW-L-R-tSH-tHW-tHH-tHS-cWW-cWW
    • History status: Exact match
  • 9x8 Sarcin-Ricin; G-bulge (1)
  • tSH-tHW-tHH-tHS (1)
  • 163
    137
    • IL_17806.1
    IL_17806.1
    • Basepair signature: cWW-L-cWW-cWW
    • History status: Exact match
    73
    138
    • IL_26785.1
    IL_26785.1
    • Basepair signature: cWW-tSH-tHH-cSH-tWH-tHS-R-L-cWW-L-cWW
    • History status: Exact match
  • 10x8 Sarcin-Ricin; G-bulge (3)
  • 183
    139
    • IL_96303.1
    IL_96303.1
    • Basepair signature: cWW-cSH-tSW-tHW-cWW-L-L-R-L-R
    • History status: Exact match
    133
    140
    • IL_36143.3
    IL_36143.3
    • Basepair signature: cWW-L-cWW
    • History status: Exact match
    53
    141
    • IL_65851.2
    IL_65851.2
    • Basepair signature: cWW-L-R-tSH-tHW-tHS-cWW-cWW
    • History status: Exact match
  • tSH-tHW-tHS with extra cWW pairs (1)
  • 143
    142
    • IL_36973.6
    IL_36973.6
    • Basepair signature: cWW-tSH-L-R-L-R-L-R-cWW-cWW
    • History status: Exact match
    143
    143
    • IL_63797.2
    IL_63797.2
    • Basepair signature: cWW-cWS-cWW
    • History status: Exact match
  • Major groove outside cWW, minor groove, intercalation pocket (1)
  • Minor groove platform (1)
  • 53
    144
    • IL_18472.2
    IL_18472.2
    • Basepair signature: cWW-L-R-L-cWW-L
    • History status: Exact match
  • Symmetric double minor groove platform (1)
  • 83
    145
    • IL_27393.7
    IL_27393.7
    • Basepair signature: cWW-L-cWW-L-L-R
    • History status: Exact match
    83
    146
    • IL_84698.1
    IL_84698.1
    • Basepair signature: cWW-L-cSW-cWW
    • History status: Exact match
  • Other IL (1)
  • 73
    147
    • IL_60192.2
    IL_60192.2
    • Basepair signature: cWW-tSH-tSH-tSS-tHS-L-R-cWW
    • History status: Exact match
  • Kink-turn (2)
  • 123
    148
    • IL_69440.2
    IL_69440.2
    • Basepair signature: cWW-L-R-cSH-cWW
    • History status: Updated, 1 parent
    83
    149
    • IL_64181.2
    IL_64181.2
    • Basepair signature: cWW-L-tHS-cWW-cWW-cWW
    • History status: Exact match
    113
    150
    • IL_09129.1
    IL_09129.1
    • Basepair signature: cWW-tWH-tWH-L-R-L-R-tWW-cWW
    • History status: Exact match
    143
    151
    • IL_67474.5
    IL_67474.5
    • Basepair signature: cWW-L-cWW-L
    • History status: Updated, 1 parent
    63
    152
    • IL_75283.2
    IL_75283.2
    • Basepair signature: cWW-tSS-L-R-L-tHS-L-cWW-L-tWH-tWH-L-L-R
    • History status: Exact match
    183
    153
    • IL_82426.4
    IL_82426.4
    • Basepair signature: cWW-cHW-R-L-cHW-cHW-cHW-L-cWW-R
    • History status: Exact match
    143
    154
    • IL_39753.1
    IL_39753.1
    • Basepair signature: cWW-L-R-tWH-L-R-L-cWW-cWW
    • History status: Exact match
  • tWH-tWH-tHW-tHW (1)
  • 133
    155
    • IL_02349.4
    IL_02349.4
    • Basepair signature: cWW-tSH-tWH-cSH-tWH-tHS-cWW
    • History status: Exact match
  • 8x6 Sarcin-Ricin with bulged A; G-bulge (2)
  • 133
    156
    • IL_14177.1
    IL_14177.1
    • Basepair signature: cWW-L-R-cWW
    • History status: Exact match
    63
    157
    • IL_70627.2
    IL_70627.2
    • Basepair signature: cWW-tWH-L-R-cWW
    • History status: Exact match
    83
    158
    • IL_05192.1
    IL_05192.1
    • Basepair signature: cWW-L-R-L-R-L-cWW
    • History status: Exact match
    93
    159
    • IL_74051.1
    IL_74051.1
    • Basepair signature: cWW-tSS-tSH-L-tHS-cWW-L
    • History status: Exact match
  • Kink-turn (1)
  • 113
    160
    • IL_34470.2
    IL_34470.2
    • Basepair signature: cWW-cWW-L-R-tSH-tHH-cSH-tWH-tHS-cWW
    • History status: Exact match
  • 9x8 Sarcin-Ricin with GA cWW pair; G-bulge (2)
  • 9x9 Sarcin-Ricin with pseudoknotted region; G-bulge (1)
  • 173
    161
    • IL_64879.2
    IL_64879.2
    • Basepair signature: cWW-L-R-tSH-L-R-L-cWW
    • History status: Exact match
  • Triple sheared related (2)
  • 113
    162
    • IL_10207.2
    IL_10207.2
    • Basepair signature: cWW-L-R-L-cSH-cSW-L-R-L-cWW-cWW
    • History status: Exact match
    133
    163
    • IL_41507.1
    IL_41507.1
    • Basepair signature: cWW-cWW-L-R-tHS-cWW
    • History status: Exact match
  • Triple sheared (1)
  • 103
    164
    • IL_58960.1
    IL_58960.1
    • Basepair signature: cWW-L-cWW-L-tWW-L-R-L
    • History status: Exact match
    113
    165
    • IL_68574.3
    IL_68574.3
    • Basepair signature: cWW-tHH-tHS-cWW
    • History status: Updated, 1 parent
    83
    166
    • IL_34739.3
    IL_34739.3
    • Basepair signature: cWW-tWW-tWW-L-R-L-R-L-cWW-L-L-R-L-R-L-R-L-R
    • History status: Exact match
    203
    167
    • IL_64900.1
    IL_64900.1
    • Basepair signature: cWW-cWW-tSS-tSH-L-tHS-R-cWW-L
    • History status: Exact match
  • Kink-turn (3)
  • 143
    168
    • IL_19724.2
    IL_19724.2
    • Basepair signature: cWW-L-cWW-L-cSH
    • History status: Exact match
    73
    169
    • IL_86929.2
    IL_86929.2
    • Basepair signature: cWW-L-R-tHS-tHS-cWW-cWW
    • History status: Exact match
  • Triple sheared with non-canonical cWW (1)
  • 123
    170
    • IL_15218.1
    IL_15218.1
    • Basepair signature: cWW-L-cWW-L-L-R-L-R-L-R-L
    • History status: Exact match
    132
    171
    • IL_45371.1
    IL_45371.1
    • Basepair signature: cWW-cWW-L-R-cWW
    • History status: Exact match
    82
    172
    • IL_25960.1
    IL_25960.1
    • Basepair signature: cWW-L-R-L-R-L-cWW-L-L
    • History status: Exact match
    112
    173
    • IL_38634.5
    IL_38634.5
    • Basepair signature: cWW-cWH-L-R-cWW
    • History status: Exact match
  • cWH basepair and non-canonical AC (2)
  • 82
    174
    • IL_57273.1
    IL_57273.1
    • Basepair signature: cWW-cWW-L-R-L-R-L-R-L-R-L-R-cWW
    • History status: Exact match
  • tSH-tHW-tHH-tHS (1)
  • 162
    175
    • IL_10484.1
    IL_10484.1
    • Basepair signature: cWW-tSH-tHS-cWW
    • History status: Exact match
  • Double sheared (2)
  • 82
    176
    • IL_52708.1
    IL_52708.1
    • Basepair signature: cWW-tSS-cWW
    • History status: Exact match
    52
    177
    • IL_59302.1
    IL_59302.1
    • Basepair signature: cWW-L-R-L-cWW-L
    • History status: Exact match
    82
    178
    • IL_87034.1
    IL_87034.1
    • Basepair signature: cWW-L-cWW
    • History status: New id, 1 parent
    52
    179
    • IL_34822.1
    IL_34822.1
    • Basepair signature: cWW-L-R-L-R-L-R-L-R-cWW
    • History status: Exact match
    122
    180
    • IL_80581.1
    IL_80581.1
    • Basepair signature: cWW-cWW-L-R-L-cWW
    • History status: Exact match
    92
    181
    • IL_38684.1
    IL_38684.1
    • Basepair signature: cWW-L-cWW-cWW
    • History status: Exact match
    72
    182
    • IL_57343.1
    IL_57343.1
    • Basepair signature: cWW-L-R-L-R-L-R-L-cWW
    • History status: Exact match
    112
    183
    • IL_74284.1
    IL_74284.1
    • Basepair signature: cWW-L-R-L-R-L-R-cWW
    • History status: Exact match
    102
    184
    • IL_84251.1
    IL_84251.1
    • Basepair signature: cWW-L-tHS-cWW
    • History status: Exact match
    82
    185
    • IL_93211.1
    IL_93211.1
    • Basepair signature: cWW-cWS-cWW-L-R-cWW-L
    • History status: Exact match
    102
    186
    • IL_19897.1
    IL_19897.1
    • Basepair signature: cWW-L-cWW-L-L-tWH-R-L
    • History status: Exact match
    112
    187
    • IL_59659.1
    IL_59659.1
    • Basepair signature: cWW-L-R-L-R-L-R-L-cWW
    • History status: New id, 1 parent
  • Other IL (1)
  • 112
    188
    • IL_58032.1
    IL_58032.1
    • Basepair signature: cWW-tWH-cWW-L-L-R
    • History status: Exact match
  • Major groove platform; stack outside cWW (1)
  • 92
    189
    • IL_74684.1
    IL_74684.1
    • Basepair signature: cWW-L-cWW-L
    • History status: Exact match
    62
    190
    • IL_11347.1
    IL_11347.1
    • Basepair signature: cWW-L-R-L-cWW-L
    • History status: Exact match
    82
    191
    • IL_55023.1
    IL_55023.1
    • Basepair signature: cWW-tSH-L-cWW
    • History status: Exact match
    72
    192
    • IL_80884.1
    IL_80884.1
    • Basepair signature: cWW-L-cWW-L-cWW-L-L
    • History status: Exact match
    102
    193
    • IL_07703.1
    IL_07703.1
    • Basepair signature: cWW-tSH-cSH-tWH-cSH-cHW-cWH-cWW-cWW
    • History status: Exact match
    152
    194
    • IL_27086.1
    IL_27086.1
    • Basepair signature: cWW-tWW-L-tWW-cWW-L
    • History status: Exact match
    102
    195
    • IL_48431.1
    IL_48431.1
    • Basepair signature: cWW-L-R-L-R-L-cWW
    • History status: Exact match
    92
    196
    • IL_53206.1
    IL_53206.1
    • Basepair signature: cWW-L-R-L-R-cWW
    • History status: Exact match
    82
    197
    • IL_69313.1
    IL_69313.1
    • Basepair signature: cWW-tWH-tHH-tHS-cWW
    • History status: Exact match
    102
    198
    • IL_76458.1
    IL_76458.1
    • Basepair signature: cWW-cSH-L-cWW
    • History status: Exact match
  • Minor groove platform (1)
  • 62
    199
    • IL_73448.1
    IL_73448.1
    • Basepair signature: cWW-L-R-L-cWW-L-L-R-L-R-L
    • History status: Exact match
    132
    200
    • IL_81522.1
    IL_81522.1
    • Basepair signature: cWW-cWS-L-cWW
    • History status: Exact match
  • Major groove minor groove platform with intercalation; mini C-loop (2)
  • 72
    201
    • IL_74794.1
    IL_74794.1
    • Basepair signature: cWW-L-cWW-L-L
    • History status: New id, 1 parent
    72
    202
    • IL_55871.1
    IL_55871.1
    • Basepair signature: cWW-tSH-L-R-L-R-L-R-L-R-L-cWW
    • History status: Exact match
    132
    203
    • IL_85149.1
    IL_85149.1
    • Basepair signature: cWW-L-cWW-L
    • History status: New id, 1 parent
  • Multiple bulged bases (1)
  • 62
    204
    • IL_93699.1
    IL_93699.1
    • Basepair signature: cWW-L-R-L-R-L-tHS-L-cWW-L
    • History status: Exact match
  • Kink-turn (1)
  • 132
    205
    • IL_53581.1
    IL_53581.1
    • Basepair signature: cWW-tWW-L-tWH-cSS-tSS-tWH-cSS-tWH-R-tSS-R-L-L-cWW-L-cWW
    • History status: Exact match
  • Kink-turn related (2)
  • 222
    206
    • IL_23992.1
    IL_23992.1
    • Basepair signature: cWW-L-R-L-R-L-R-L-R-L-R-cWW
    • History status: Exact match
    142
    207
    • IL_46559.1
    IL_46559.1
    • Basepair signature: cWW-L-tHH-L-R-L-cWW-L-R
    • History status: Exact match
    122
    208
    • IL_81631.1
    IL_81631.1
    • Basepair signature: cWW-L-R-cSH-R-R-L-R-cWW
    • History status: Exact match
  • 5x5 Sarcin-Ricin with intercalated A; G-bulge (1)
  • 122
    209
    • IL_88613.1
    IL_88613.1
    • Basepair signature: cWW-L-R-tSW-tHH-cSH-tWH-tHS-cWW
    • History status: Exact match
    152
    210
    • IL_99670.1
    IL_99670.1
    • Basepair signature: cWW-cSH-cWS-cWW-cWW
    • History status: Exact match
    92
    211
    • IL_24484.1
    IL_24484.1
    • Basepair signature: cWW-tSH-L-R-tHS-cWW
    • History status: New id, 1 parent
  • tSH-tHW-tHS (1)
  • 102
    212
    • IL_64509.1
    IL_64509.1
    • Basepair signature: cWW-tWW-tWW-tSS-L-cWW
    • History status: Exact match
  • Kink-turn related (1)
  • 112
    213
    • IL_91592.1
    IL_91592.1
    • Basepair signature: cWW-L-tHH-L-cWW-L-L
    • History status: Exact match
    102
    214
    • IL_28026.1
    IL_28026.1
    • Basepair signature: cWW-tSH-tWH-cWH-L-tHW-tSS-tHH-cWW
    • History status: Exact match
    152
    215
    • IL_21620.1
    IL_21620.1
    • Basepair signature: cWW-cSH-L-R-cWW-L-L
    • History status: New id, 1 parent
    92
    216
    • IL_53749.1
    IL_53749.1
    • Basepair signature: cWW-L-cWW-L-L-R-L-R-L
    • History status: Exact match
    112
    217
    • IL_77870.1
    IL_77870.1
    • Basepair signature: cWW-L-R-L-tHS-L-cWW-L-cWW
    • History status: Exact match
    132
    218
    • IL_37722.1
    IL_37722.1
    • Basepair signature: cWW-L-tSH-L-tHW-tHS-R-cWW-L
    • History status: Exact match
  • Kink-turn (1)
  • 142
    219
    • IL_95004.1
    IL_95004.1
    • Basepair signature: cWW-cWH-R-L-cWW-L-L
    • History status: Exact match
    92
    220
    • IL_22046.1
    IL_22046.1
    • Basepair signature: cWW-L-cWW-L-cWW-L
    • History status: Exact match
  • Other IL (1)
  • 92
    221
    • IL_44998.1
    IL_44998.1
    • Basepair signature: cWW-cWW-R-cWW-tSS-R-cWW-cWW-L-cWW-L-L-L-cWW-L-cSS-L-R-L-R
    • History status: Exact match
    262
    222
    • IL_53762.1
    IL_53762.1
    • Basepair signature: cWW-tSH-tHH-L-R-L-R-L-R-L-R-L-R-L-R-L-cWW-L-cWW-L
    • History status: Exact match
    252
    223
    • IL_78349.1
    IL_78349.1
    • Basepair signature: cWW-L-R-L-R-L-cWW-L-cWW-L
    • History status: Exact match
    142
    224
    • IL_74114.1
    IL_74114.1
    • Basepair signature: cWW-cWS-cWW-L-R
    • History status: Exact match
    82
    225
    • IL_15174.1
    IL_15174.1
    • Basepair signature: cWW-L-R-L-R-L-cWW-cSS-cWW-L
    • History status: Exact match
    122
    226
    • IL_22248.1
    IL_22248.1
    • Basepair signature: cWW-cWW-cSH-cWW-L
    • History status: Exact match
  • Other IL (1)
  • 82
    227
    • IL_38394.1
    IL_38394.1
    • Basepair signature: cWW-tWH-cWW-L-L-R-L
    • History status: Exact match
  • Stack outside cWW (1)
  • 102
    228
    • IL_74125.1
    IL_74125.1
    • Basepair signature: cWW-L-cWW-L
    • History status: Exact match
    62
    229
    • IL_10447.1
    IL_10447.1
    • Basepair signature: cWW-tWW-L-R-L-R-L-R-L-tHW-R-L-cWW
    • History status: Exact match
    172
    230
    • IL_30149.1
    IL_30149.1
    • Basepair signature: cWW-L-R-L-R-tWH-L-R-L-R-L-cWW
    • History status: Exact match
    142
    231
    • IL_42032.1
    IL_42032.1
    • Basepair signature: cWW-cSH-cWW-tWH-L-cWW-L-L
    • History status: Exact match
    112
    232
    • IL_04105.1
    IL_04105.1
    • Basepair signature: cWW-L-R-L-R-L-R-L-R-L-cWW-L-L-R
    • History status: Exact match
    161
    233
    • IL_22252.1
    IL_22252.1
    • Basepair signature: cWW-L-R-L-R-L-R-L-R-L-R-L-cWW-L
    • History status: Exact match
    161
    234
    • IL_34780.1
    IL_34780.1
    • Basepair signature: cWW-L-R-L-R-L-R-L-R-cWW-cWW-cWW
    • History status: Exact match
  • Kink-turn (1)
  • 161
    235
    • IL_62654.1
    IL_62654.1
    • Basepair signature: cWW-tSH-tHH-tHS-cWW
    • History status: Exact match
  • tSH-tHH-tHS (1)
  • 101
    236
    • IL_80412.1
    IL_80412.1
    • Basepair signature: cWW-tSW-L-cWW-L-L-R-L
    • History status: Exact match
    111
    237
    • IL_06300.1
    IL_06300.1
    • Basepair signature: cWW-L-R-L-R-L-cWW
    • History status: Exact match
    91
    238
    • IL_74184.1
    IL_74184.1
    • Basepair signature: cWW-L-tHS-L-cWW-L-L-L
    • History status: Exact match
    111
    239
    • IL_84205.1
    IL_84205.1
    • Basepair signature: cWW-L-cWW
    • History status: Exact match
    51
    240
    • IL_93094.1
    IL_93094.1
    • Basepair signature: cWW-L-tHH-L-tHS-L-cWW
    • History status: Exact match
  • Reverse kink-turn (1)
  • 111
    241
    • IL_19852.1
    IL_19852.1
    • Basepair signature: cWW-tWH-cWW-cWH-cWH-cWH
    • History status: Exact match
    111
    242
    • IL_30441.1
    IL_30441.1
    • Basepair signature: cWW-cSH-tSW-tHW-cWW-L-L-R-L-L-R
    • History status: Exact match
    141
    243
    • IL_69091.1
    IL_69091.1
    • Basepair signature: cWW-cWW-L-R-L-R-L-R-L-R-L-cWW-L
    • History status: Exact match
    161
    244
    • IL_95961.1
    IL_95961.1
    • Basepair signature: cWW-tSH-L-cWW-L
    • History status: Exact match
    81
    245
    • IL_15484.1
    IL_15484.1
    • Basepair signature: cWW-L-R-L-R-L-R-L-R-L-cWW-cSH
    • History status: Exact match
    141
    246
    • IL_22436.1
    IL_22436.1
    • Basepair signature: cWW-L-tWH-tHW-cWW-cWW
    • History status: Exact match
  • Kink-turn related (1)
  • 111
    247
    • IL_45488.1
    IL_45488.1
    • Basepair signature: cWW-cWW-L-R-tWH-L-R-cWW
    • History status: Exact match
    121
    248
    • IL_54896.1
    IL_54896.1
    • Basepair signature: cWW-L-R-L-cWW-L-L-R-L-R
    • History status: Exact match
    121
    249
    • IL_62947.1
    IL_62947.1
    • Basepair signature: cWW-cWW-cWW-R-cWW-R-cWW-R-cWW-R-L-tSH-L-L-L-L
    • History status: Exact match
    231
    250
    • IL_90346.1
    IL_90346.1
    • Basepair signature: cWW-L-R-L-cWW-L-L
    • History status: Exact match
    91
    251
    • IL_17765.1
    IL_17765.1
    • Basepair signature: cWW-tWH-cHW-L-tSS-cSS-cWW-R-L
    • History status: Exact match
    141
    252
    • IL_47972.1
    IL_47972.1
    • Basepair signature: cWW-L-R-L-cWW-L
    • History status: Exact match
    81
    253
    • IL_10810.1
    IL_10810.1
    • Basepair signature: cWW-L-cWS-cSH-cWW
    • History status: Exact match
    81
    254
    • IL_52743.1
    IL_52743.1
    • Basepair signature: cWW-tSW-L-cSW-L-cWW-L
    • History status: Exact match
    101
    255
    • IL_22821.1
    IL_22821.1
    • Basepair signature: cWW-L-R-L-R-L-R-L-R-L-cWW-L-L-R-L
    • History status: Exact match
  • Pseudoknot (1)
  • 171
    256
    • IL_90348.1
    IL_90348.1
    • Basepair signature: cWW-cSW-L-cWW-L
    • History status: Exact match
    71
    257
    • IL_84409.1
    IL_84409.1
    • Basepair signature: cWW-tSS-L-cWH-L-cSH-cHW-tWH-cSS-tWH-tSW-cWS-R-L-R-cSH-R-cWW-L
    • History status: Exact match
    231
    258
    • IL_43140.1
    IL_43140.1
    • Basepair signature: cWW-L-cWW-cWH-L-L
    • History status: Exact match
    91
    259
    • IL_87290.1
    IL_87290.1
    • Basepair signature: cWW-L-R-L-R-L-R-L-R-L-R-L-R-L-R-L
    • History status: Exact match
    171
    260
    • IL_15978.1
    IL_15978.1
    • Basepair signature: cWW-tSH-L-cWS-cWW-L
    • History status: Exact match
    101
    261
    • IL_23152.1
    IL_23152.1
    • Basepair signature: cWW-L-cWW-L-L-R-L-R-L
    • History status: Exact match
    111
    262
    • IL_38882.1
    IL_38882.1
    • Basepair signature: cWW-L-R-tSS-R-L-tSH-R-L-cWW-R-L-R-L-cWW
    • History status: Exact match
    191
    263
    • IL_84665.1
    IL_84665.1
    • Basepair signature: cWW-L-cSW-cWW-L-L-R-L-R-L-R-L
    • History status: Exact match
    151
    264
    • IL_93585.1
    IL_93585.1
    • Basepair signature: cWW-L-cWW-L-cWW-tWH-L-cSH-L
    • History status: Exact match
    111
    265
    • IL_11882.1
    IL_11882.1
    • Basepair signature: cWW-L-R-tWH-tWH-L-R-L-cWW
    • History status: Exact match
    131
    266
    • IL_20245.1
    IL_20245.1
    • Basepair signature: cWW-L-R-L-R-L-R-L-R-L-R-L-R-L-cWW-L-L-R-L
    • History status: Exact match
    211
    267
    • IL_31504.1
    IL_31504.1
    • Basepair signature: cWW-cWW-cWS-tSH-L-tWH-cWW-tSS-tSH-L-R-L
    • History status: Exact match
    181
    268
    • IL_43166.1
    IL_43166.1
    • Basepair signature: cWW-L-R-L-cWW-L-L-R-L-R
    • History status: Exact match
    121
    269
    • IL_59724.1
    IL_59724.1
    • Basepair signature: cWW-L-R-L-R-cSH-tWH-tHS-R-L-cWW
    • History status: Exact match
  • 8x7 Sarcin-Ricin with CC bifurcated pair; G-bulge (1)
  • 151
    270
    • IL_88190.1
    IL_88190.1
    • Basepair signature: cWW-L-R-tHS-L-R-L-R-cWW
    • History status: Exact match
    121
    271
    • IL_96371.1
    IL_96371.1
    • Basepair signature: cWW-tHH-cWW
    • History status: Exact match
    61
    272
    • IL_16073.1
    IL_16073.1
    • Basepair signature: cWW-L-cWW-L-cWW-L-L-L-R
    • History status: Exact match
    121
    273
    • IL_46112.1
    IL_46112.1
    • Basepair signature: cWW-L-cWW-L-L-R-L
    • History status: Exact match
    91
    274
    • IL_00559.1
    IL_00559.1
    • Basepair signature: cWW-cWW-L-cWW-L-L-R-L-R-L-R-L-R-L-R-L
    • History status: Exact match
    191
    275
    • IL_20463.1
    IL_20463.1
    • Basepair signature: cWW-tSH-tHW-cSH-tHH-cWH-L-R-cWW-L-L-R
    • History status: Exact match
  • 7x11 Sarcin-Ricin with pseudoknotted region; G-bulge (1)
  • 181
    276
    • IL_31890.1
    IL_31890.1
    • Basepair signature: cWW-L-R-L-R-L-R-L
    • History status: Exact match
    91
    277
    • IL_97253.1
    IL_97253.1
    • Basepair signature: cWW-L-R-L-R-L-cWW-L-L-R-L
    • History status: Exact match
    131
    278
    • IL_46461.1
    IL_46461.1
    • Basepair signature: cWW-L-tHH-L-tHS-L-cWW-L-L-L-L-R-L-R-tSW-R-R-L-R-L-R-L-R
    • History status: Exact match
    281
    279
    • IL_73662.1
    IL_73662.1
    • Basepair signature: cWW-L-cWW-L-L-R-L-R-L-R
    • History status: Exact match
    121
    280
    • IL_19023.1
    IL_19023.1
    • Basepair signature: cWW-cHW-L-cWW-L-L-R-L-R-L-R
    • History status: Exact match
    141
    281
    • IL_38969.1
    IL_38969.1
    • Basepair signature: cWW-L-R-L-cWW-L-L
    • History status: Exact match
    91
    282
    • IL_01393.1
    IL_01393.1
    • Basepair signature: cWW-L-cWW-L-L
    • History status: Exact match
    71
    283
    • IL_12750.1
    IL_12750.1
    • Basepair signature: cWW-L-R-L-R-L-R-L-R-L-R-L-cWW
    • History status: Exact match
    151
    284
    • IL_21121.1
    IL_21121.1
    • Basepair signature: cWW-tSW-cWS-cSH-tSW-tWH-R-R-cWW-cWW
    • History status: Exact match
    111
    285
    • IL_32270.1
    IL_32270.1
    • Basepair signature: cWW-L-R-L-tHS-cWW
    • History status: New id, no parents
    91
    286
    • IL_70096.1
    IL_70096.1
    • Basepair signature: cWW-L-cWW-cWW
    • History status: Exact match
    71
    287
    • IL_04736.1
    IL_04736.1
    • Basepair signature: cWW-L-R-L-R-L-R-L-R-cWW
    • History status: Exact match
    121
    288
    • IL_37629.1
    IL_37629.1
    • Basepair signature: cWW-L-cWW
    • History status: Exact match
  • Stack outside cWW (1)
  • 51
    289
    • IL_73759.1
    IL_73759.1
    • Basepair signature: cWW-cSH-tHS-cWH-cHW-cWW
    • History status: Exact match
    91
    290
    • IL_19048.1
    IL_19048.1
    • Basepair signature: cWW-L-R-L-R-L-cSH-L-R-cWW-cWW
    • History status: Exact match
    141
    291
    • IL_39287.1
    IL_39287.1
    • Basepair signature: cWW-L-R-L-tSH-tSS-L-tHS-cWW-L-L
    • History status: Exact match
    151
    292
    • IL_85222.1
    IL_85222.1
    • Basepair signature: cWW-L-R-L-R-L-cWW-L-L
    • History status: Exact match
    111
    293
    • IL_13394.1
    IL_13394.1
    • Basepair signature: cWW-L-R-L-R-L-R-L-R-L-R-L-R-L-R-L-R-L-R-L-R
    • History status: Exact match
    221
    294
    • IL_33557.1
    IL_33557.1
    • Basepair signature: cWW-tHH-R-L-R-L-L-R-L-R-cWW
    • History status: Exact match
    141
    295
    • IL_44325.1
    IL_44325.1
    • Basepair signature: cWW-cWH-cWW-L
    • History status: Exact match
    61
    296
    • IL_53601.1
    IL_53601.1
    • Basepair signature: cWW-tHW-tHS-cWW-cWW
    • History status: Exact match
    101
    297
    • IL_61242.1
    IL_61242.1
    • Basepair signature: cWW-cWW-L-R-L-R-cWW
    • History status: Exact match
    101
    298
    • IL_70149.1
    IL_70149.1
    • Basepair signature: cWW-L-R-cWW
    • History status: Exact match
    61
    299
    • IL_77827.1
    IL_77827.1
    • Basepair signature: cWW-tSS-R-L-L-R-L-cWW-tHH-L-R-L-R-L-R-L-R-L-R-L-cSH-R-R-L-R-L-R-cWW-R-cWW-R-L-R-L-R-L-R-R
    • History status: Exact match
    451
    300
    • IL_56105.1
    IL_56105.1
    • Basepair signature: cWW-tSH-tSH-cWW-L
    • History status: Exact match
    81
    301
    • IL_58809.1
    IL_58809.1
    • Basepair signature: cWW-tSS-L-R-L-R-L-R-L-cWW-L-L-R-L-R-L-L-R
    • History status: Exact match
    201
    302
    • IL_85630.1
    IL_85630.1
    • Basepair signature: cWW-tSH-L-R-L-R-L-cWW-L-cWW-L
    • History status: Exact match
    151
    303
    • IL_94351.1
    IL_94351.1
    • Basepair signature: cWW-L-R-L-R-L-tHS-cWW
    • History status: Exact match
    111
    304
    • IL_16665.1
    IL_16665.1
    • Basepair signature: cWW-L-R-L-R-L-R-L-cWW
    • History status: Exact match
    111
    305
    • IL_24499.1
    IL_24499.1
    • Basepair signature: cWW-cWS-L-R-L-R-cWW-L-cSH-L
    • History status: Exact match
    121
    306
    • IL_64842.1
    IL_64842.1
    • Basepair signature: cWW-L-tWH-L-cWW-L-cSH
    • History status: Exact match
    101
    307
    • IL_91920.1
    IL_91920.1
    • Basepair signature: cWW-cWW-tHH-cWW
    • History status: Exact match
    81
    308
    • IL_10092.1
    IL_10092.1
    • Basepair signature: cWW-tSH-tSH-L-R-cWW-L-R-cWW
    • History status: Exact match
    141
    309
    • IL_19516.1
    IL_19516.1
    • Basepair signature: cWW-L-R-L-R-L-cWW-L-cWW-L-L-L-R-L-R
    • History status: Exact match
    181
    310
    • IL_28564.1
    IL_28564.1
    • Basepair signature: cWW-L-R-L-cWW
    • History status: Exact match
    71
    311
    • IL_41414.1
    IL_41414.1
    • Basepair signature: cWW-L-R-L-cWW-tWH-cWW-L-L-L-R-L-R-cSH-L-L
    • History status: Exact match
    211
    312
    • IL_51101.1
    IL_51101.1
    • Basepair signature: cWW-L-cWW
    • History status: Exact match
    51
    313
    • IL_58819.1
    IL_58819.1
    • Basepair signature: cWW-L-R-tWH-R-L-tHW-tSS-R-L-R-L-cWW
    • History status: Exact match
    171
    314
    • IL_85652.1
    IL_85652.1
    • Basepair signature: cWW-tSH-L-R-L-R-L-cWW-L
    • History status: Exact match
    121
    315
    • IL_61300.1
    IL_61300.1
    • Basepair signature: cWW-cSS-tSS-L-tHW-cWW-L-R-L-R-L-R
    • History status: Exact match
    141
    316
    • IL_47108.1
    IL_47108.1
    • Basepair signature: cWW-L-R-L-tHH-L-cWW
    • History status: Exact match
    101
    317
    • IL_51191.1
    IL_51191.1
    • Basepair signature: cWW-L-R-L-cWW-L-L
    • History status: Exact match
    91
    318
    • IL_53787.1
    IL_53787.1
    • Basepair signature: cWW-L-cWW-L-L-R-L-R-L-R-L-R
    • History status: Exact match
    141
    319
    • IL_70801.1
    IL_70801.1
    • Basepair signature: cWW-cWW-L-R-tWW-L-R-L-cWW
    • History status: Exact match
    131
    320
    • IL_89055.1
    IL_89055.1
    • Basepair signature: cWW-L-R-L-R-L-R-L-cWW-L-cWW-L-L
    • History status: Exact match
    161
    321
    • IL_84029.1
    IL_84029.1
    • Basepair signature: cWW-L-R-L-R-L-cWW-L
    • History status: Exact match
    101
    322
    • IL_59027.1
    IL_59027.1
    • Basepair signature: cWW-L-R-L-cWW-L-L
    • History status: Exact match
    91
    323
    • IL_68633.1
    IL_68633.1
    • Basepair signature: cWW-L-R-L-R-cSH-tWH-tHS-R-L-cWW-L
    • History status: Exact match
  • 9x7 Sarcin-Ricin with inserted C; G-bulge (1)
  • 161
    324
    • IL_95811.1
    IL_95811.1
    • Basepair signature: cWW-L-cWW-L-cWW-L-R-L
    • History status: Exact match
  • Vitamin B12 Aptamer (1)
  • 111

    Coloring options:


    Updated, 1 parent 66; Exact match 245; Updated, 2 parents 3; New id, 1 parent 7; New id, no parents 1; New id, 2 parents 2;

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