Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
HL_4V63_0011/AA/12:22No text annotation
Not in a motif group
homologous
HL_5J7L_001
HL_89881.2
HL_4V63_0031/AA/102C:103BNo text annotation
Not in a motif group
HL_4V63_0041/AA/158:163GNRA
Not in a motif group
homologous
HL_4LFB_003
HL_42097.2
HL_4V63_0051/AA/186G:191ANo text annotation
Not in a motif group
homologous
HL_4LFB_004
HL_10278.1
HL_4V63_0061/AA/201:216No text annotation
Not in a motif group
geometric
HL_4WF9_037
HL_94803.2
HL_4V63_0071/AA/259:267No text annotation
Not in a motif group
homologous
HL_4LFB_006
HL_69023.2
HL_4V63_0081/AA/296:301GNRA
Not in a motif group
homologous
HL_4LFB_007
HL_42097.2
HL_4V63_0091/AA/320:333No text annotation
Not in a motif group
homologous
HL_4LFB_008
HL_81205.2
HL_4V63_0101/AA/342:347UNCG
Not in a motif group
homologous
HL_4LFB_009
HL_03562.2
HL_4V63_0111/AA/379:384GNRA
Not in a motif group
homologous
HL_5J7L_010
HL_42097.2
HL_4V63_0121/AA/419:424UNCG
Not in a motif group
homologous
HL_5J7L_011
HL_03562.2
HL_4V63_0131/AA/458:474No text annotation
Not in a motif group
homologous
HL_6CZR_083
HL_43656.2
HL_4V63_0141/AA/522:527No text annotation
Not in a motif group
geometric
HL_4WF9_003
HL_75407.1
HL_4V63_0151/AA/617:623No text annotation
Not in a motif group
homologous
HL_4LFB_014
HL_26881.1
HL_4V63_0161/AA/689:698No text annotation
Not in a motif group
homologous
HL_5J7L_015
HL_12326.1
HL_4V63_0171/AA/726:731Other HL
Not in a motif group
homologous
HL_5J7L_016
HL_87030.2
HL_4V63_0181/AA/786:796No text annotation
Not in a motif group
homologous
HL_4LFB_017
HL_12326.1
HL_4V63_0191/AA/838:848No text annotation
Not in a motif group
homologous
HL_4LFB_018
HL_38927.2
HL_4V63_0201/AA/862:867GNRA
Not in a motif group
homologous
HL_4LFB_019
HL_42097.2
HL_4V63_0211/AA/897:902GNRA
Not in a motif group
homologous
HL_4LFB_020
HL_42097.2
HL_4V63_0221/AA/963:972No text annotation
Not in a motif group
homologous
HL_4LFB_021
NA
HL_4V63_0231/AA/1011:1018No text annotation
Not in a motif group
homologous
HL_6CZR_093
NA
HL_4V63_0241/AA/1027:1034No text annotation
Not in a motif group
HL_4V63_0251/AA/1076:1081GNRA
Not in a motif group
homologous
HL_5J7L_023
HL_42097.2
HL_4V63_0261/AA/1089:1096No text annotation
Not in a motif group
homologous
HL_5J7L_024
HL_71554.2
HL_4V63_0271/AA/1134:1140No text annotation
Not in a motif group
homologous
HL_6CZR_097
NA
HL_4V63_0281/AA/1165:1171GNRA
Not in a motif group
homologous
HL_4LFB_027
HL_42097.2
HL_4V63_0291/AA/1265:1270No text annotation
Not in a motif group
homologous
HL_6CZR_099
NA
HL_4V63_0301/AA/1314:1323No text annotation
Not in a motif group
homologous
HL_4LFB_029
HL_89380.2
HL_4V63_0311/AA/1356:1366No text annotation
Not in a motif group
HL_4V63_0321/AA/1449:1454UNCG
Not in a motif group
homologous
HL_5J7L_030
HL_03562.2
HL_4V63_0331/AA/1515:1520No text annotation
Not in a motif group
homologous
HL_4LFB_032
NA
HL_4V63_0341/AY/13:22No text annotation
Not in a motif group
homologous
HL_4YYE_001
NA
HL_4V63_0351/AY/31:39tRNA anticodon loop
Not in a motif group
homologous
HL_4TUE_034
HL_53597.2
HL_4V63_0361/AY/53:61T-loop with 2 stacked bulged bases
Not in a motif group
homologous
HL_4V9Q_215
HL_22280.1
HL_4V63_0371/AZ/13:22No text annotation
Not in a motif group
homologous
HL_3KFU_004
NA
HL_4V63_0381/AZ/31:39tRNA anticodon loop
Not in a motif group
homologous
HL_6UFM_002
HL_53597.2
HL_4V63_0391/AZ/53:61T-loop with 2 stacked bulged bases
Not in a motif group
homologous
HL_6JXM_003
HL_22280.1
HL_4V63_0401/BA/59:68No text annotation
Not in a motif group
homologous
HL_7RQB_001
HL_99167.1
HL_4V63_0411/BA/87:95No text annotation
Not in a motif group
homologous
HL_7RQB_002
HL_96598.1
HL_4V63_0421/BA/123:128No text annotation
Not in a motif group
geometric
HL_5J7L_136
HL_75407.1
HL_4V63_0431/BA/137B:141BNo text annotation
Not in a motif group
homologous
HL_7RQB_004
HL_79921.3
HL_4V63_0441/BA/155:171No text annotation
Not in a motif group
homologous
HL_7A0S_005
HL_30784.2
HL_4V63_0451/BA/194:201No text annotation
Not in a motif group
homologous
HL_7RQB_006
HL_06192.2
HL_4V63_0461/BA/225:230No text annotation
Not in a motif group
homologous
HL_7RQB_007
HL_02862.2
HL_4V63_0471/BA/246:252No text annotation
Not in a motif group
homologous
HL_7RQB_008
HL_67216.7
HL_4V63_0481/BA/270K:270QNo text annotation
Not in a motif group
HL_4V63_0491/BA/305:312No text annotation
Not in a motif group
homologous
HL_7RQB_010
HL_89380.2
HL_4V63_0501/BA/319:323No text annotation
Not in a motif group
homologous
HL_7A0S_011
HL_75407.1
HL_4V63_0511/BA/327:335No text annotation
Not in a motif group
homologous
HL_7RQB_012
HL_08002.9
HL_4V63_0521/BA/382:392No text annotation
Not in a motif group
homologous
HL_7RQB_013
HL_91503.4
HL_4V63_0531/BA/410:417No text annotation
Not in a motif group
homologous
HL_7RQB_014
HL_96598.1
HL_4V63_0541/BA/462:467No text annotation
Not in a motif group
homologous
HL_7A0S_015
HL_42097.2
HL_4V63_0551/BA/487:493No text annotation
Not in a motif group
homologous
HL_7RQB_016
HL_42097.2
HL_4V63_0561/BA/544:549GNRA
Not in a motif group
geometric
HL_6UFG_004
HL_42097.2
HL_4V63_0571/BA/566:575No text annotation
Not in a motif group
homologous
HL_7RQB_018
HL_89380.2
HL_4V63_0581/BA/611:617No text annotation
Not in a motif group
homologous
HL_7RQB_019
HL_32369.1
HL_4V63_0591/BA/629:634GNRA
Not in a motif group
homologous
HL_4WF9_020
HL_42097.2
HL_4V63_0601/BA/641:647No text annotation
Not in a motif group
homologous
HL_7RQB_021
HL_42097.2
HL_4V63_0611/BA/712:719No text annotation
Not in a motif group
homologous
HL_7RQB_022
HL_84085.2
HL_4V63_0621/BA/744:753No text annotation
Not in a motif group
homologous
HL_7RQB_023
HL_39334.6
HL_4V63_0631/BA/779:785No text annotation
Not in a motif group
homologous
HL_7A0S_023
HL_27930.1
HL_4V63_0641/BA/826:831No text annotation
Not in a motif group
homologous
HL_4WF9_025
HL_64365.1
HL_4V63_0651/BA/884:892No text annotation
Not in a motif group
HL_4V63_0661/BA/955:962No text annotation
Not in a motif group
homologous
HL_7RQB_027
HL_42097.2
HL_4V63_0671/BA/978:985No text annotation
Not in a motif group
homologous
HL_7RQB_028
HL_64430.2
HL_4V63_0681/BA/1064:1074No text annotation
Not in a motif group
homologous
HL_6PRV_001
HL_07145.1
HL_4V63_0691/BA/1092:1099No text annotation
Not in a motif group
homologous
HL_6PRV_002
HL_84085.2
HL_4V63_0701/BA/1171:1178No text annotation
Not in a motif group
HL_4V63_0711/BA/1222:1227GNRA
Not in a motif group
geometric
HL_4WF9_059
HL_42097.2
HL_4V63_0721/BA/1281:1289No text annotation
Not in a motif group
homologous
HL_7RQB_033
HL_89380.2
HL_4V63_0731/BA/1324:1330No text annotation
Not in a motif group
homologous
HL_4WF9_033
HL_46680.1
HL_4V63_0741/BA/1363:1368No text annotation
Not in a motif group
homologous
HL_7RQB_035
HL_87030.2
HL_4V63_0751/BA/1389:1398No text annotation
Not in a motif group
homologous
HL_5J7L_168
HL_69023.2
HL_4V63_0761/BA/1450:1461No text annotation
Not in a motif group
HL_4V63_0771/BA/1492:1498No text annotation
Not in a motif group
HL_4V63_0781/BA/1533:1538Other HL
Not in a motif group
geometric
HL_2CZJ_007
HL_53845.1
HL_4V63_0791/BA/1565:1568No text annotation
Not in a motif group
homologous
HL_5J7L_172
HL_38927.2
HL_4V63_0801/BA/1612:1619No text annotation
Not in a motif group
homologous
HL_7A0S_040
HL_64430.2
HL_4V63_0811/BA/1630:1636No text annotation
Not in a motif group
geometric
HL_2Y8W_001
HL_01057.1
HL_4V63_0821/BA/1691:1696No text annotation
Not in a motif group
homologous
HL_7RQB_042
HL_03562.2
HL_4V63_0831/BA/1727:1733No text annotation
Not in a motif group
homologous
HL_7RQB_043
HL_43656.2
HL_4V63_0841/BA/1752:1756No text annotation
Not in a motif group
homologous
HL_7RQB_044
HL_76539.2
HL_4V63_0851/BA/1777:1787No text annotation
Not in a motif group
homologous
HL_7RQB_045
HL_43613.5
HL_4V63_0861/BA/1806:1811No text annotation
Not in a motif group
homologous
HL_7RQB_046
HL_42097.2
HL_4V63_0871/BA/1864:1878No text annotation
Not in a motif group
homologous
HL_7RQB_047
HL_42097.2
HL_4V63_0881/BA/1910:1920No text annotation
Not in a motif group
geometric
HL_5TBW_049
HL_71924.2
HL_4V63_0891/BA/1949:1957No text annotation
Not in a motif group
homologous
HL_4WF9_046
HL_51824.1
HL_4V63_0901/BA/2027:2036No text annotation
Not in a motif group
homologous
HL_7RQB_050
HL_90642.6
HL_4V63_0921/BA/2209:2215No text annotation
Not in a motif group
geometric
HL_6U8D_003
HL_89098.1
HL_4V63_0931/BA/2248:2256No text annotation
Not in a motif group
homologous
HL_4WF9_049
HL_53171.2
HL_4V63_0941/BA/2264:2276No text annotation
Not in a motif group
homologous
HL_7RQB_054
HL_19870.6
HL_4V63_0951/BA/2303:2313No text annotation
Not in a motif group
homologous
HL_7A0S_054
HL_11805.3
HL_4V63_0961/BA/2324:2331No text annotation
Not in a motif group
homologous
HL_7RQB_056
HL_12078.2
HL_4V63_0971/BA/2355:2362No text annotation
Not in a motif group
homologous
HL_7RQB_057
HL_09136.1
HL_4V63_0981/BA/2374:2379No text annotation
Not in a motif group
homologous
HL_7A0S_057
HL_42097.2
HL_4V63_0991/BA/2404:2413No text annotation
Not in a motif group
homologous
HL_7RQB_059
HL_30784.2
HL_4V63_1001/BA/2471:2479No text annotation
Not in a motif group
homologous
HL_7RQB_060
HL_06192.2
HL_4V63_1011/BA/2528:2535No text annotation
Not in a motif group
homologous
HL_7RQB_061
HL_91104.1
HL_4V63_1021/BA/2551:2557No text annotation
Not in a motif group
homologous
HL_4WF9_058
HL_43656.2
HL_4V63_1031/BA/2594:2599No text annotation
Not in a motif group
homologous
HL_7RQB_063
HL_42097.2
HL_4V63_1041/BA/2658:2663GNRA
Not in a motif group
homologous
HL_5J7L_197
HL_42097.2
HL_4V63_1051/BA/2701:2706No text annotation
Not in a motif group
homologous
HL_7RQB_065
HL_53171.2
HL_4V63_1061/BA/2745:2759No text annotation
Not in a motif group
homologous
HL_7RQB_066
HL_56677.7
HL_4V63_1081/BA/2819:2827No text annotation
Not in a motif group
homologous
HL_7A0S_067
HL_27930.1
HL_4V63_1091/BA/2856:2861No text annotation
Not in a motif group
homologous
HL_7RQB_069
HL_42097.2
HL_4V63_1101/BB/38:44No text annotation
Not in a motif group
geometric
HL_5NFV_001
HL_76539.2
HL_4V63_1111/BB/86:90No text annotation
Not in a motif group
homologous
HL_7A0S_070
HL_42097.2
HL_4V63_1121/CA/12:22No text annotation
Not in a motif group
homologous
HL_5J7L_001
HL_89881.2
HL_4V63_1141/CA/102C:103BNo text annotation
Not in a motif group
HL_4V63_1151/CA/158:163GNRA
Not in a motif group
homologous
HL_4LFB_003
HL_42097.2
HL_4V63_1161/CA/186G:191ANo text annotation
Not in a motif group
homologous
HL_4LFB_004
HL_10278.1
HL_4V63_1171/CA/201:216No text annotation
Not in a motif group
geometric
HL_4WF9_037
HL_94803.2
HL_4V63_1181/CA/259:267No text annotation
Not in a motif group
homologous
HL_4LFB_006
HL_69023.2
HL_4V63_1191/CA/296:301GNRA
Not in a motif group
homologous
HL_4LFB_007
HL_42097.2
HL_4V63_1201/CA/320:333No text annotation
Not in a motif group
homologous
HL_4LFB_008
HL_81205.2
HL_4V63_1211/CA/342:347UNCG
Not in a motif group
homologous
HL_4LFB_009
HL_03562.2
HL_4V63_1221/CA/379:384GNRA
Not in a motif group
homologous
HL_5J7L_010
HL_42097.2
HL_4V63_1231/CA/419:424UNCG
Not in a motif group
homologous
HL_5J7L_011
HL_03562.2
HL_4V63_1241/CA/458:474No text annotation
Not in a motif group
homologous
HL_6CZR_083
HL_43656.2
HL_4V63_1251/CA/522:527No text annotation
Not in a motif group
geometric
HL_4WF9_003
HL_75407.1
HL_4V63_1261/CA/617:623No text annotation
Not in a motif group
homologous
HL_4LFB_014
HL_26881.1
HL_4V63_1271/CA/689:698No text annotation
Not in a motif group
homologous
HL_5J7L_015
HL_12326.1
HL_4V63_1281/CA/726:731Other HL
Not in a motif group
homologous
HL_5J7L_016
HL_87030.2
HL_4V63_1291/CA/786:796No text annotation
Not in a motif group
homologous
HL_4LFB_017
HL_12326.1
HL_4V63_1301/CA/838:848No text annotation
Not in a motif group
homologous
HL_4LFB_018
HL_38927.2
HL_4V63_1311/CA/862:867GNRA
Not in a motif group
homologous
HL_4LFB_019
HL_42097.2
HL_4V63_1321/CA/897:902GNRA
Not in a motif group
homologous
HL_4LFB_020
HL_42097.2
HL_4V63_1331/CA/963:972No text annotation
Not in a motif group
homologous
HL_4LFB_021
NA
HL_4V63_1341/CA/1011:1018No text annotation
Not in a motif group
homologous
HL_6CZR_093
NA
HL_4V63_1351/CA/1027:1034No text annotation
Not in a motif group
HL_4V63_1361/CA/1076:1081GNRA
Not in a motif group
homologous
HL_5J7L_023
HL_42097.2
HL_4V63_1371/CA/1089:1096No text annotation
Not in a motif group
homologous
HL_5J7L_024
HL_71554.2
HL_4V63_1381/CA/1134:1140No text annotation
Not in a motif group
homologous
HL_6CZR_097
NA
HL_4V63_1391/CA/1165:1171GNRA
Not in a motif group
homologous
HL_4LFB_027
HL_42097.2
HL_4V63_1401/CA/1265:1270No text annotation
Not in a motif group
homologous
HL_6CZR_099
NA
HL_4V63_1411/CA/1314:1323No text annotation
Not in a motif group
homologous
HL_4LFB_029
HL_89380.2
HL_4V63_1421/CA/1356:1366No text annotation
Not in a motif group
HL_4V63_1431/CA/1449:1454UNCG
Not in a motif group
homologous
HL_5J7L_030
HL_03562.2
HL_4V63_1441/CA/1515:1520No text annotation
Not in a motif group
homologous
HL_4LFB_032
NA
HL_4V63_1451/CY/13:22No text annotation
Not in a motif group
homologous
HL_4YYE_001
NA
HL_4V63_1461/CY/31:39tRNA anticodon loop
Not in a motif group
homologous
HL_4TUE_034
HL_53597.2
HL_4V63_1471/CY/53:61T-loop with 2 stacked bulged bases
Not in a motif group
homologous
HL_4V9Q_215
HL_22280.1
HL_4V63_1481/CZ/13:22No text annotation
Not in a motif group
homologous
HL_3KFU_004
NA
HL_4V63_1491/CZ/31:39tRNA anticodon loop
Not in a motif group
homologous
HL_6UFM_002
HL_53597.2
HL_4V63_1501/CZ/53:61T-loop with 2 stacked bulged bases
Not in a motif group
homologous
HL_6JXM_003
HL_22280.1
HL_4V63_1511/DA/59:68No text annotation
Not in a motif group
homologous
HL_7RQB_001
HL_99167.1
HL_4V63_1521/DA/87:95No text annotation
Not in a motif group
homologous
HL_7RQB_002
HL_96598.1
HL_4V63_1531/DA/123:128No text annotation
Not in a motif group
homologous
HL_7RQB_003
HL_75407.1
HL_4V63_1541/DA/137B:141BNo text annotation
Not in a motif group
homologous
HL_7RQB_004
HL_79921.3
HL_4V63_1551/DA/155:171No text annotation
Not in a motif group
homologous
HL_7A0S_005
HL_30784.2
HL_4V63_1561/DA/194:201No text annotation
Not in a motif group
geometric
HL_7RQB_006
HL_06192.2
HL_4V63_1571/DA/225:230No text annotation
Not in a motif group
homologous
HL_7RQB_007
HL_02862.2
HL_4V63_1581/DA/246:252No text annotation
Not in a motif group
homologous
HL_7RQB_008
HL_67216.7
HL_4V63_1591/DA/270K:270QNo text annotation
Not in a motif group
HL_4V63_1601/DA/305:312No text annotation
Not in a motif group
homologous
HL_7RQB_010
HL_89380.2
HL_4V63_1611/DA/319:323No text annotation
Not in a motif group
homologous
HL_7A0S_011
HL_75407.1
HL_4V63_1621/DA/327:335No text annotation
Not in a motif group
homologous
HL_7RQB_012
HL_08002.9
HL_4V63_1631/DA/382:392No text annotation
Not in a motif group
homologous
HL_7RQB_013
HL_91503.4
HL_4V63_1641/DA/410:417No text annotation
Not in a motif group
homologous
HL_7RQB_014
HL_96598.1
HL_4V63_1651/DA/462:467No text annotation
Not in a motif group
homologous
HL_7A0S_015
HL_42097.2
HL_4V63_1661/DA/487:493No text annotation
Not in a motif group
homologous
HL_7RQB_016
HL_42097.2
HL_4V63_1671/DA/544:549GNRA
Not in a motif group
geometric
HL_6UFG_004
HL_42097.2
HL_4V63_1681/DA/566:575No text annotation
Not in a motif group
geometric
HL_7RQB_018
HL_89380.2
HL_4V63_1691/DA/611:617No text annotation
Not in a motif group
homologous
HL_7RQB_019
HL_32369.1
HL_4V63_1701/DA/629:634GNRA
Not in a motif group
homologous
HL_4WF9_020
HL_42097.2
HL_4V63_1711/DA/641:647No text annotation
Not in a motif group
homologous
HL_7RQB_021
HL_42097.2
HL_4V63_1721/DA/712:719No text annotation
Not in a motif group
homologous
HL_7RQB_022
HL_84085.2
HL_4V63_1731/DA/744:753No text annotation
Not in a motif group
homologous
HL_7RQB_023
HL_39334.6
HL_4V63_1741/DA/779:785No text annotation
Not in a motif group
homologous
HL_7A0S_023
HL_27930.1
HL_4V63_1751/DA/826:831No text annotation
Not in a motif group
homologous
HL_4WF9_025
HL_64365.1
HL_4V63_1761/DA/884:892No text annotation
Not in a motif group
HL_4V63_1771/DA/955:962No text annotation
Not in a motif group
homologous
HL_7RQB_027
HL_42097.2
HL_4V63_1781/DA/978:985No text annotation
Not in a motif group
homologous
HL_7RQB_028
HL_64430.2
HL_4V63_1791/DA/1064:1074No text annotation
Not in a motif group
homologous
HL_6PRV_001
HL_07145.1
HL_4V63_1801/DA/1092:1099No text annotation
Not in a motif group
homologous
HL_6PRV_002
HL_84085.2
HL_4V63_1811/DA/1171:1178No text annotation
Not in a motif group
HL_4V63_1821/DA/1222:1227No text annotation
Not in a motif group
homologous
HL_7RQB_032
HL_42097.2
HL_4V63_1831/DA/1281:1289No text annotation
Not in a motif group
homologous
HL_7RQB_033
HL_89380.2
HL_4V63_1841/DA/1324:1330No text annotation
Not in a motif group
homologous
HL_4WF9_033
HL_46680.1
HL_4V63_1851/DA/1363:1368No text annotation
Not in a motif group
homologous
HL_7RQB_035
HL_87030.2
HL_4V63_1861/DA/1389:1398No text annotation
Not in a motif group
homologous
HL_5J7L_168
HL_69023.2
HL_4V63_1871/DA/1450:1461No text annotation
Not in a motif group
HL_4V63_1881/DA/1492:1498No text annotation
Not in a motif group
HL_4V63_1891/DA/1533:1538Other HL
Not in a motif group
geometric
HL_2CZJ_007
HL_53845.1
HL_4V63_1901/DA/1565:1568No text annotation
Not in a motif group
homologous
HL_5J7L_172
HL_38927.2
HL_4V63_1911/DA/1612:1619No text annotation
Not in a motif group
homologous
HL_7A0S_040
HL_64430.2
HL_4V63_1921/DA/1630:1636No text annotation
Not in a motif group
geometric
HL_2Y8W_001
HL_01057.1
HL_4V63_1931/DA/1691:1696UNCG
Not in a motif group
geometric
HL_4V9F_044
HL_03562.2
HL_4V63_1941/DA/1727:1733No text annotation
Not in a motif group
homologous
HL_7RQB_043
HL_43656.2
HL_4V63_1951/DA/1752:1756No text annotation
Not in a motif group
homologous
HL_7RQB_044
HL_76539.2
HL_4V63_1961/DA/1777:1787No text annotation
Not in a motif group
homologous
HL_7RQB_045
HL_43613.5
HL_4V63_1971/DA/1806:1811No text annotation
Not in a motif group
homologous
HL_7RQB_046
HL_42097.2
HL_4V63_1981/DA/1864:1878No text annotation
Not in a motif group
homologous
HL_7RQB_047
HL_42097.2
HL_4V63_1991/DA/1910:1920No text annotation
Not in a motif group
geometric
HL_5TBW_049
HL_71924.2
HL_4V63_2001/DA/1949:1957No text annotation
Not in a motif group
homologous
HL_4WF9_046
HL_51824.1
HL_4V63_2011/DA/2027:2036No text annotation
Not in a motif group
homologous
HL_7RQB_050
HL_90642.6
HL_4V63_2031/DA/2209:2215No text annotation
Not in a motif group
geometric
HL_6U8D_003
HL_89098.1
HL_4V63_2041/DA/2248:2256No text annotation
Not in a motif group
homologous
HL_4WF9_049
HL_53171.2
HL_4V63_2051/DA/2264:2276No text annotation
Not in a motif group
homologous
HL_7RQB_054
HL_19870.6
HL_4V63_2061/DA/2303:2313No text annotation
Not in a motif group
homologous
HL_7A0S_054
HL_11805.3
HL_4V63_2071/DA/2324:2331No text annotation
Not in a motif group
homologous
HL_7RQB_056
HL_12078.2
HL_4V63_2081/DA/2355:2362No text annotation
Not in a motif group
homologous
HL_7RQB_057
HL_09136.1
HL_4V63_2091/DA/2374:2379No text annotation
Not in a motif group
homologous
HL_7A0S_057
HL_42097.2
HL_4V63_2101/DA/2404:2413No text annotation
Not in a motif group
homologous
HL_7RQB_059
HL_30784.2
HL_4V63_2111/DA/2471:2479No text annotation
Not in a motif group
homologous
HL_7RQB_060
HL_06192.2
HL_4V63_2121/DA/2528:2535No text annotation
Not in a motif group
homologous
HL_7RQB_061
HL_91104.1
HL_4V63_2131/DA/2551:2557No text annotation
Not in a motif group
homologous
HL_4WF9_058
HL_43656.2
HL_4V63_2141/DA/2594:2599No text annotation
Not in a motif group
homologous
HL_7RQB_063
HL_42097.2
HL_4V63_2151/DA/2658:2663GNRA
Not in a motif group
geometric
HL_5B2P_001
HL_42097.2
HL_4V63_2161/DA/2701:2706No text annotation
Not in a motif group
homologous
HL_7RQB_065
HL_53171.2
HL_4V63_2171/DA/2745:2759No text annotation
Not in a motif group
homologous
HL_7RQB_066
HL_56677.7
HL_4V63_2191/DA/2819:2827No text annotation
Not in a motif group
homologous
HL_7A0S_067
HL_27930.1
HL_4V63_2201/DA/2856:2861No text annotation
Not in a motif group
homologous
HL_7RQB_069
HL_42097.2
HL_4V63_2211/DB/38:44No text annotation
Not in a motif group
homologous
HL_5J7L_203
HL_87939.1
HL_4V63_2221/DB/86:90No text annotation
Not in a motif group
homologous
HL_7A0S_070
HL_42097.2

Problematic loops

#loop idProblemSequence
HL_4V63_002No text annotation
HL_4V63_091No text annotation
HL_4V63_107No text annotation
HL_4V63_113No text annotation
HL_4V63_202No text annotation
HL_4V63_218No text annotation

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
IL_4V63_0011/AA/30:32,
1/AA/552:553
Single bulged G
Not in a motif group
homologous
IL_4LFB_001
IL_00225.3
IL_4V63_0021/AA/44:45,
1/AA/396:398
Single bulged A
Not in a motif group
homologous
IL_4LFB_002
IL_37497.3
IL_4V63_0031/AA/47:52,
1/AA/359:361
No text annotation
Not in a motif group
geometric
IL_4LFB_003
IL_11178.1
IL_4V63_0041/AA/54:56,
1/AA/356:357
Minor groove platform
Not in a motif group
homologous
IL_4LFB_004
IL_93353.1
IL_4V63_0051/AA/67:69,
1/AA/99:102
No text annotation
Not in a motif group
homologous
IL_4LFB_006
IL_95997.1
IL_4V63_0061/AA/129A:131,
1/AA/231:232
Multiple bulged bases
Not in a motif group
homologous
IL_4LFB_007
IL_16396.2
IL_4V63_0071/AA/132:136,
1/AA/227:230
No text annotation
Not in a motif group
geometric
IL_4LFB_008
IL_58764.3
IL_4V63_0091/AA/148:153,
1/AA/168:174
tWH-tWH-tHW-tHW
Not in a motif group
homologous
IL_4LFB_009
IL_39753.1
IL_4V63_0101/AA/186A:186C,
1/AA/191E:191G
No text annotation
Not in a motif group
homologous
IL_4LFB_010
IL_95997.1
IL_4V63_0111/AA/242:247,
1/AA/277:284
Kink-turn with non-sequential stacking
Not in a motif group
homologous
IL_4LFB_011
IL_45067.2
IL_4V63_0121/AA/249:252,
1/AA/274:275
No text annotation
Not in a motif group
homologous
IL_4LFB_012
IL_48100.2
IL_4V63_0131/AA/292:293,
1/AA/304:308
C-loop
Not in a motif group
homologous
IL_4LFB_013
IL_37712.2
IL_4V63_0141/AA/367:369,
1/AA/392:393
Single bulged U
Not in a motif group
geometric
IL_4LFB_014
IL_83039.14
IL_4V63_0151/AA/371:375,
1/AA/389:390
C-loop
Not in a motif group
geometric
IL_4LFB_015
IL_75255.1
IL_4V63_0161/AA/375:376,
1/AA/387:389
Single bulged G
Not in a motif group
homologous
IL_4LFB_016
IL_00225.3
IL_4V63_0171/AA/409:416,
1/AA/427:433
No text annotation
Not in a motif group
IL_4V63_0181/AA/446:450,
1/AA/483:488
6x5 Sarcin-Ricin; G-bulge
Not in a motif group
geometric
IL_4LFB_018
IL_88269.3
IL_4V63_0191/AA/450:455,
1/AA/477:483
No text annotation
Not in a motif group
homologous
IL_4LFB_019
IL_11882.1
IL_4V63_0201/AA/504:511,
1/AA/540:541
SSU/LSU pseudoknot
Not in a motif group
homologous
IL_4LFB_020
IL_15861.7
IL_4V63_0211/AA/515:522,
1/AA/527:536
No text annotation
Not in a motif group
IL_4V63_0221/AA/569:575,
1/AA/880:881
No text annotation
Not in a motif group
homologous
IL_4LFB_022
IL_69996.1
IL_4V63_0231/AA/580:584,
1/AA/757:761
tSH-tHW-tHS
Not in a motif group
homologous
IL_4LFB_023
IL_17136.1
IL_4V63_0241/AA/594:596,
1/AA/644:645
Major groove platform
Not in a motif group
homologous
IL_4LFB_024
IL_27635.2
IL_4V63_0251/AA/597:598,
1/AA/640:643
Major groove minor groove platform; mini C-loop
Not in a motif group
homologous
IL_6CZR_137
IL_09061.6
IL_4V63_0261/AA/605:612,
1/AA/628:633
No text annotation
Not in a motif group
IL_4V63_0271/AA/654:655,
1/AA/751:754
Major groove platform; stack outside cWW
Not in a motif group
geometric
IL_5J7L_031
IL_50694.2
IL_4V63_0281/AA/657:658,
1/AA/747:749
Major groove platform
Not in a motif group
homologous
IL_4LFB_028
IL_27635.2
IL_4V63_0291/AA/662:666,
1/AA/740:743
Tandem non-canonical cWW pairs
Not in a motif group
homologous
IL_4LFB_029
IL_71110.1
IL_4V63_0301/AA/673:678,
1/AA/712:717
No text annotation
Not in a motif group
geometric
IL_5J7L_034
IL_04668.1
IL_4V63_0311/AA/683:688,
1/AA/699:707
Kink-turn
Not in a motif group
homologous
IL_4LFB_031
IL_37722.1
IL_4V63_0321/AA/774:778,
1/AA/804:805
Left turn
Not in a motif group
homologous
IL_4LFB_032
IL_29346.1
IL_4V63_0331/AA/779:783,
1/AA/799:803
tSH-tHW-tHS
Not in a motif group
homologous
IL_4LFB_033
IL_17136.1
IL_4V63_0341/AA/887:894,
1/AA/905:910
8x6 Sarcin-Ricin with inserted Y; G-bulge
Not in a motif group
homologous
IL_4LFB_034
IL_24606.2
IL_4V63_0351/AA/922:923,
1/AA/1393:1395
Single bulged A
Not in a motif group
homologous
IL_5J7L_039
IL_37497.3
IL_4V63_0361/AA/925:927,
1/AA/1390:1391
Single bulged G
Not in a motif group
homologous
IL_4LFB_036
IL_00225.3
IL_4V63_0371/AA/933:935,
1/AA/1380:1384
Minor groove platform
Not in a motif group
homologous
IL_5J7L_041
IL_47078.1
IL_4V63_0381/AA/953:954,
1/AA/1226:1228
No text annotation
Not in a motif group
homologous
IL_6CZR_150
NA
IL_4V63_0391/AA/993:997,
1/AA/1044:1045
Minor groove platform
Not in a motif group
homologous
IL_5J7L_043
IL_47078.1
IL_4V63_0401/AA/1048:1050,
1/AA/1208:1209
Single bulged U
Not in a motif group
homologous
IL_5J7L_046
IL_83039.14
IL_4V63_0411/AA/1051:1056,
1/AA/1204:1207
Tandem non-canonical cWW pairs
Not in a motif group
geometric
IL_4V88_473
IL_30621.3
IL_4V63_0421/AA/1057:1058,
1/AA/1199:1203
Minor groove platform
Not in a motif group
homologous
IL_4LFB_045
IL_93353.1
IL_4V63_0431/AA/1060:1061,
1/AA/1195:1197
Single bulged U
Not in a motif group
geometric
IL_6CZR_156
IL_83039.14
IL_4V63_0441/AA/1061:1063,
1/AA/1193:1195
No text annotation
Not in a motif group
homologous
IL_4LFB_047
IL_95997.1
IL_4V63_0451/AA/1124:1127,
1/AA/1145:1149
No text annotation
Not in a motif group
IL_4V63_0461/AA/1127:1128,
1/AA/1143:1145
Single stack bend
Not in a motif group
geometric
IL_7A0S_005
IL_76488.2
IL_4V63_0471/AA/1128:1132,
1/AA/1142:1143
Minor groove platform
Not in a motif group
geometric
IL_4LFB_049
IL_15052.1
IL_4V63_0481/AA/1158:1161,
1/AA/1175:1181
No text annotation
Not in a motif group
geometric
IL_5J7L_053
IL_42032.1
IL_4V63_0491/AA/1247:1253,
1/AA/1284:1290
No text annotation
Not in a motif group
homologous
IL_4LFB_051
IL_09129.1
IL_4V63_0501/AA/1255:1258,
1/AA/1277:1282
No text annotation
Not in a motif group
homologous
IL_4LFB_052
IL_84205.1
IL_4V63_0511/AA/1259:1262,
1/AA/1273:1276
Double sheared
Not in a motif group
geometric
IL_5J7L_256
IL_09705.9
IL_4V63_0521/AA/1303:1308,
1/AA/1329:1334
No text annotation
Not in a motif group
homologous
IL_4LFB_055
IL_19954.2
IL_4V63_0531/AA/1399:1401,
1/AA/1501:1504
No text annotation
Not in a motif group
geometric
IL_4V88_463
IL_36143.3
IL_4V63_0541/AA/1401:1404,
1/AA/1497:1501
No text annotation
Not in a motif group
geometric
IL_4V88_464
IL_99670.1
IL_4V63_0551/AA/1405:1407,
1/AA/1494:1496
No text annotation
Not in a motif group
geometric
IL_5MWI_002
IL_95997.1
IL_4V63_0561/AA/1407:1409,
1/AA/1491:1494
No text annotation
Not in a motif group
geometric
IL_4V88_455
IL_10023.1
IL_4V63_0571/AA/1412:1414,
1/AA/1486:1488
No text annotation
Not in a motif group
homologous
IL_5J7L_061
IL_95997.1
IL_4V63_0581/AA/1416:1419,
1/AA/1481:1484
Double sheared
Not in a motif group
homologous
IL_5J7L_062
IL_09705.9
IL_4V63_0591/AA/1431:1435,
1/AA/1466:1469
UAA/GAN variation
Not in a motif group
geometric
IL_4LFB_062
IL_07235.1
IL_4V63_0601/AA/1435:1437,
1/AA/1464:1466
No text annotation
Not in a motif group
homologous