#Varna 2DMotifCore NtsInstances
1
  • HL_85603.2
HL_85603.2
  • Basepair signature: cWW-F-F-F-F
  • History status: Updated, 2 parents
  • GNRA (278)
  • GNRA related (3)
  • GNRA variation (3)
  • 6284
    2
    • HL_15422.1
    HL_15422.1
    • Basepair signature: cWW-tWH-F-F-F-F-F
    • History status: New id, 2 parents
  • T-loop with 2 stacked bulged bases (102)
  • T-loop with 2 bulged bases not stacked (2)
  • 9104
    3
    • HL_29960.2
    HL_29960.2
    • Basepair signature: cWW-tSW-F
    • History status: Updated, 1 parent
  • UNCG (46)
  • UNCG variation (3)
  • 549
    4
    • HL_23932.1
    HL_23932.1
    • Basepair signature: cWW-tWH-F-F-F
    • History status: New id, 1 parent
  • T-loop with 2 stacked bulged bases (27)
  • T-loop with 2 bulged bases not stacked (8)
  • T-loop with 3 stacked bulged bases (3)
  • T-loop with 1 bulged base (2)
  • 740
    5
    • HL_36427.1
    HL_36427.1
    • Basepair signature: cWW-F-F-F-F-F-F-F
    • History status: New id, 1 parent
  • tRNA anticodon loop (33)
  • Anticodon loop related (4)
  • 937
    6
    • HL_29031.1
    HL_29031.1
    • Basepair signature: cWW-F-F
    • History status: New id, > 2 parents
  • GNRA (22)
  • GNRA variation (6)
  • GNRA with GA tSW pair (4)
  • 435
    7
    • HL_33074.1
    HL_33074.1
    • Basepair signature: cWW-F
    • History status: New id, > 2 parents
  • U1 small nuclear ribonucleoprotein A binding hairpin (21)
  • tRNA D-loop (1)
  • 330
    8
    • HL_11871.1
    HL_11871.1
    • Basepair signature: cWW-F
    • History status: New id, > 2 parents
  • Mini UNCG (29)
  • 329
    9
    • HL_12078.6
    HL_12078.6
    • Basepair signature: cWW-F-F-F-F-F
    • History status: Updated, 2 parents
  • Pseudoknot geometry (28)
  • 728
    10
    • HL_58029.1
    HL_58029.1
    • Basepair signature: cWW-tSH-F-F
    • History status: New id, 2 parents
  • GNRA (24)
  • 626
    11
    • HL_22584.2
    HL_22584.2
    • Basepair signature: cWW-tSW-F
    • History status: Updated, 2 parents
  • Fab BL3-6 binding hairpin with tSW (18)
  • Other HL (3)
  • 525
    12
    • HL_25462.4
    HL_25462.4
    • Basepair signature: cWW-cWS-F
    • History status: Updated, 1 parent
  • tRNA D-loop (23)
  • 523
    13
    • HL_46535.1
    HL_46535.1
    • Basepair signature: cWW-F
    • History status: New id, > 2 parents
  • Mini UNCG (17)
  • Mini UNCG with extended bulge (3)
  • Mini UNCG related (2)
  • 322
    14
    • HL_08002.11
    HL_08002.11
    • Basepair signature: cWW-tWH-F-F
    • History status: Updated, 1 parent
  • T-loop with unstacked turn (21)
  • 21
    15
    • HL_45820.1
    HL_45820.1
    • Basepair signature: cWW-tWH-F-F-F
    • History status: New id, 2 parents
  • T-loop with 2 stacked bulged bases (18)
  • Other HL (1)
  • T-loop with 2 bulged bases not stacked (1)
  • 720
    16
    • HL_76539.7
    HL_76539.7
    • Basepair signature: cWW-F
    • History status: Updated, 2 parents
  • GNRA variation (4)
  • GNRA related (2)
  • 319
    17
    • HL_56241.3
    HL_56241.3
    • Basepair signature: cWW-F-F-F
    • History status: Updated, 2 parents
  • T-loop with 1 bulged base (2)
  • Other HL (1)
  • UNCG variation (1)
  • 519
    18
    • HL_00828.1
    HL_00828.1
    • Basepair signature: cWW-F-F-F-F
    • History status: New id, > 2 parents
  • Pseudoknot geometry (13)
  • Ribsomal LSU H95 (6)
  • 619
    19
    • HL_28421.1
    HL_28421.1
    • Basepair signature: cWW-F
    • History status: New id, > 2 parents
    318
    20
    • HL_84085.4
    HL_84085.4
    • Basepair signature: cWW-tSH-F-F-F-F
    • History status: Updated, 1 parent
  • GNRA wlth tandem sheared (12)
  • GNRA with extra near cWW (3)
  • GNRA related (1)
  • GNRA wlth extra near cWW (1)
  • 817
    21
    • HL_70546.3
    HL_70546.3
    • Basepair signature: cWW-F
    • History status: Updated, 1 parent
    316
    22
    • HL_96598.3
    HL_96598.3
    • Basepair signature: cWW
    • History status: Updated, 2 parents
  • Pseudoknot geometry (14)
  • Externally structured (2)
  • 216
    23
    • HL_61911.1
    HL_61911.1
    • Basepair signature: cWW-F-F-F-F-F-F
    • History status: New id, 2 parents
  • GNRA related (5)
  • T-loop related (2)
  • GNRA with extra near cWW (1)
  • tRNA anticodon loop (1)
  • 815
    24
    • HL_06192.4
    HL_06192.4
    • Basepair signature: cWW-tSH-F
    • History status: Updated, 1 parent
    515
    25
    • HL_42228.1
    HL_42228.1
    • Basepair signature: cWW-F
    • History status: New id, 2 parents
  • Pseudoknot geometry with 3' bulge (9)
  • Pseudoknot geometry (1)
  • 312
    26
    • HL_73355.1
    HL_73355.1
    • Basepair signature: cWW-F-F-F-F
    • History status: New id, 2 parents
  • Purine riboswitch (7)
  • Pseudoknot geometry (2)
  • 612
    27
    • HL_10397.1
    HL_10397.1
    • Basepair signature: cWW-F-F-F-F-F-F
    • History status: New id, 2 parents
  • GNRA with extra cWW (4)
  • tRNA anticodon loop with synthetase (2)
  • tRNA anticodon loop (1)
  • T-loop (1)
  • GNRA with extra cWH (1)
  • 812
    28
    • HL_23914.1
    HL_23914.1
    • Basepair signature: cWW-F-F-F
    • History status: New id, > 2 parents
  • UNCG (4)
  • 512
    29
    • HL_41152.1
    HL_41152.1
    • Basepair signature: cWW-F-F
    • History status: New id, > 2 parents
  • tRNA anticodon loop with synthetase (1)
  • UNCG (1)
  • 412
    30
    • HL_66853.4
    HL_66853.4
    • Basepair signature: cWW-F-F-F-cSH
    • History status: Updated, 1 parent
  • tRNA D-loop (4)
  • 12
    31
    • HL_58034.1
    HL_58034.1
    • Basepair signature: cWW-F-F-F-F-F-F
    • History status: New id, 2 parents
  • Pseudoknot with intercalation (9)
  • Pseudoknot (2)
  • 811
    32
    • HL_78347.1
    HL_78347.1
    • Basepair signature: cWW-F-F-F-F
    • History status: New id, > 2 parents
    611
    33
    • HL_52105.1
    HL_52105.1
    • Basepair signature: cWW-F
    • History status: New id, 2 parents
  • Mini UNCG (5)
  • 11
    34
    • HL_78499.1
    HL_78499.1
    • Basepair signature: cWW-F-F-F-F-F
    • History status: New id, 2 parents
  • GNRA variation (4)
  • Anticodon loop related (2)
  • tRNA anticodon loop (1)
  • 711
    35
    • HL_45598.1
    HL_45598.1
    • Basepair signature: cWW-F
    • History status: New id, > 2 parents
  • Mini UNCG (1)
  • 311
    36
    • HL_71554.2
    HL_71554.2
    • Basepair signature: cWW-cWW-F-F-F
    • History status: Exact match
  • T-loop related (5)
  • 711
    37
    • HL_66836.1
    HL_66836.1
    • Basepair signature: cWW-cWS-R
    • History status: New id, 2 parents
  • tRNA anticodon loop (6)
  • Anticodon loop related (5)
  • 811
    38
    • HL_55359.1
    HL_55359.1
    • Basepair signature: cWW-F
    • History status: New id, 2 parents
  • Mini UNCG with extended bulge (1)
  • 310
    39
    • HL_12326.2
    HL_12326.2
    • Basepair signature: cWW-F-F-tSH-F-F
    • History status: Exact match
    1010
    40
    • HL_73266.6
    HL_73266.6
    • Basepair signature: cWW-F-F-cSW-cSH-F
    • History status: Exact match
    910
    41
    • HL_38060.1
    HL_38060.1
    • Basepair signature: cWW-tWH-F-F-F
    • History status: New id, 1 parent
  • T-loop related (4)
  • 710
    42
    • HL_44926.1
    HL_44926.1
    • Basepair signature: cWW-F
    • History status: New id, > 2 parents
  • Mini UNCG (5)
  • GNRA related (2)
  • 310
    43
    • HL_67216.8
    HL_67216.8
    • Basepair signature: cWW-tSH-F-F
    • History status: Exact match
    69
    44
    • HL_00182.1
    HL_00182.1
    • Basepair signature: cWW-F-F-F-F-F-F
    • History status: New id, 2 parents
  • Pseudoknot geometry (2)
  • 89
    45
    • HL_47383.1
    HL_47383.1
    • Basepair signature: cWW-F-F-F-F-F
    • History status: New id, 1 parent
    79
    46
    • HL_36684.2
    HL_36684.2
    • Basepair signature: cWW-F-F-F-F-F-F-F-F-F
    • History status: Updated, 2 parents
    119
    47
    • HL_23827.1
    HL_23827.1
    • Basepair signature: cWW-F-F-F-F-F-F-F
    • History status: New id, 2 parents
    99
    48
    • HL_07306.1
    HL_07306.1
    • Basepair signature: cWW-F
    • History status: New id, 2 parents
  • tRNA D-loop (5)
  • 38
    49
    • HL_32617.7
    HL_32617.7
    • Basepair signature: cWW-F-cSH
    • History status: Updated, 1 parent
  • tRNA D-loop (5)
  • Other HL (3)
  • 8
    50
    • HL_26881.4
    HL_26881.4
    • Basepair signature: cWW-tWH-F-F
    • History status: Updated, 1 parent
  • GNRA-like with tWH (2)
  • GNRA (1)
  • 68
    51
    • HL_83767.2
    HL_83767.2
    • Basepair signature: cWW-F-F
    • History status: Updated, 1 parent
    68
    52
    • HL_04171.6
    HL_04171.6
    • Basepair signature: cWW-cWW-F-F-F-F-F-F
    • History status: Updated, 1 parent
    108
    53
    • HL_51824.2
    HL_51824.2
    • Basepair signature: cWW-F-F-tSH-F-F
    • History status: Exact match
    88
    54
    • HL_56677.8
    HL_56677.8
    • Basepair signature: cWW-tWH-tSH-cWH-tSH-tHW-tHW-tSW
    • History status: Exact match
    8
    55
    • HL_34168.4
    HL_34168.4
    • Basepair signature: cWW-cWW-F
    • History status: Updated, 1 parent
  • UNCG variation (1)
  • 58
    56
    • HL_19870.8
    HL_19870.8
    • Basepair signature: cWW-tSH-tHH-tWW-F
    • History status: Updated, 1 parent
  • tRNA anticodon loop (1)
  • 98
    57
    • HL_64690.3
    HL_64690.3
    • Basepair signature: cWW-cSW-F-F-F-F
    • History status: Updated, 1 parent
    88
    58
    • HL_74284.1
    HL_74284.1
    • Basepair signature: cWW-F-F
    • History status: New id, > 2 parents
  • T-loop related (1)
  • 48
    59
    • HL_25222.1
    HL_25222.1
    • Basepair signature: cWW-cWW-F-F-F-F-F-F-F-F
    • History status: New id, 1 parent
    7
    60
    • HL_81742.1
    HL_81742.1
    • Basepair signature: cWW-F-F
    • History status: New id, > 2 parents
  • T-loop related (3)
  • tRNA D-loop (1)
  • 47
    61
    • HL_91058.2
    HL_91058.2
    • Basepair signature: cWW-F-F
    • History status: Updated, 2 parents
  • UNCG variation (2)
  • 47
    62
    • HL_39334.8
    HL_39334.8
    • Basepair signature: cWW-cWS-tSW-F-F
    • History status: Updated, 1 parent
    77
    63
    • HL_64107.1
    HL_64107.1
    • Basepair signature: cWW-F
    • History status: New id, 2 parents
  • GNRA variation (3)
  • 37
    64
    • HL_34217.1
    HL_34217.1
    • Basepair signature: cWW-F-F
    • History status: New id, 2 parents
  • GNRA (4)
  • UNCG variation (1)
  • 47
    65
    • HL_39947.1
    HL_39947.1
    • Basepair signature: cWW-F-F-F-F-F
    • History status: New id, > 2 parents
    77
    66
    • HL_79462.1
    HL_79462.1
    • Basepair signature: cWW-F
    • History status: New id, 1 parent
  • Mini UNCG (5)
  • 37
    67
    • HL_14199.1
    HL_14199.1
    • Basepair signature: cWW-tSH-F
    • History status: New id, 2 parents
    57
    68
    • HL_35086.1
    HL_35086.1
    • Basepair signature: cWW-F-F-F-F-F-F-F
    • History status: New id, 2 parents
  • tRNA anticodon loop (3)
  • Anticodon loop related (1)
  • 97
    69
    • HL_20743.4
    HL_20743.4
    • Basepair signature: cWW-F-F-cSS-F
    • History status: Exact match
    7
    70
    • HL_32095.1
    HL_32095.1
    • Basepair signature: cWW-F
    • History status: New id, 2 parents
  • tRNA D-loop (1)
  • 36
    71
    • HL_72777.1
    HL_72777.1
    • Basepair signature: cWW-F-cWH-F-F-F-F
    • History status: New id, 1 parent
    96
    72
    • HL_50902.1
    HL_50902.1
    • Basepair signature: cWW-F-F
    • History status: New id, 2 parents
  • tRNA D-loop (6)
  • 46
    73
    • HL_85680.2
    HL_85680.2
    • Basepair signature: cWW-tSH-F
    • History status: Updated, 1 parent
    6
    74
    • HL_90642.7
    HL_90642.7
    • Basepair signature: cWW-tWH-F-F-F
    • History status: Exact match
    76
    75
    • HL_43613.6
    HL_43613.6
    • Basepair signature: cWW-tWH-tWH-F
    • History status: Exact match
    76
    76
    • HL_21392.1
    HL_21392.1
    • Basepair signature: cWW-cWW-F-F
    • History status: New id, 2 parents
  • GNRA with extra cWW (1)
  • 66
    77
    • HL_56371.1
    HL_56371.1
    • Basepair signature: cWW-F-F-F-F-F
    • History status: New id, 1 parent
    76
    78
    • HL_91680.1
    HL_91680.1
    • Basepair signature: cWW-F-F
    • History status: New id, 2 parents
  • UNCG (3)
  • 46
    79
    • HL_86769.3
    HL_86769.3
    • Basepair signature: cWW-F-cSS-cSH
    • History status: Exact match
    76
    80
    • HL_40252.1
    HL_40252.1
    • Basepair signature: cWW-tSH-cWS-F
    • History status: New id, 1 parent
    6
    81
    • HL_52553.1
    HL_52553.1
    • Basepair signature: cWW-F-F-F-F-F-F-F-F
    • History status: New id, 1 parent
    106
    82
    • HL_30445.1
    HL_30445.1
    • Basepair signature: cWW-F-F-F-F-F-F-F-F
    • History status: New id, 2 parents
    106
    83
    • HL_31196.1
    HL_31196.1
    • Basepair signature: cWW-cWW-F-F-F-F-F
    • History status: New id, > 2 parents
    96
    84
    • HL_97756.1
    HL_97756.1
    • Basepair signature: cWW-cSH-cWS-tSW-cSW-cWW-F-F-F-F
    • History status: New id, no parents
    146
    85
    • HL_90617.5
    HL_90617.5
    • Basepair signature: cWW-tSH
    • History status: Updated, 1 parent
    46
    86
    • HL_16416.1
    HL_16416.1
    • Basepair signature: cWW-F-F-F
    • History status: New id, 1 parent
  • Pseudoknot geometry with 3' bulge (5)
  • 55
    87
    • HL_36514.1
    HL_36514.1
    • Basepair signature: cWW
    • History status: New id, 1 parent
  • Pseudoknot geometry (1)
  • 25
    88
    • HL_61849.1
    HL_61849.1
    • Basepair signature: cWW-F-F
    • History status: Exact match
    45
    89
    • HL_04221.1
    HL_04221.1
    • Basepair signature: cWW-cWS-tSH-cWS-F
    • History status: Exact match
  • tRNA D-loop (5)
  • 5
    90
    • HL_04434.1
    HL_04434.1
    • Basepair signature: cWW-F-F
    • History status: New id, 2 parents
    45
    91
    • HL_19368.1
    HL_19368.1
    • Basepair signature: cWW-F-F-F-F-F-F-F
    • History status: New id, 2 parents
  • tRNA anticodon loop (2)
  • 95
    92
    • HL_57293.1
    HL_57293.1
    • Basepair signature: cWW-F
    • History status: New id, 1 parent
  • GNRA (3)
  • 35
    93
    • HL_50779.1
    HL_50779.1
    • Basepair signature: cWW-F-F-F-F-F-F-F
    • History status: New id, 1 parent
    95
    94
    • HL_60707.1
    HL_60707.1
    • Basepair signature: cWW-F
    • History status: New id, > 2 parents
    35
    95
    • HL_89881.2
    HL_89881.2
    • Basepair signature: cWW-tHW-F-F-F-F-F-F
    • History status: Exact match
    105
    96
    • HL_55195.1
    HL_55195.1
    • Basepair signature: cWW-F-F
    • History status: Exact match
    45
    97
    • HL_77232.3
    HL_77232.3
    • Basepair signature: cWW-F-F-F-F
    • History status: Updated, 1 parent
  • tRNA anticodon loop (4)
  • 74
    98
    • HL_16845.7
    HL_16845.7
    • Basepair signature: cWW-F-F-F
    • History status: Exact match
    4
    99
    • HL_59342.1
    HL_59342.1
    • Basepair signature: cWW-F-F-F-F-F-F-F-F
    • History status: New id, 1 parent
    4
    100
    • HL_07579.4
    HL_07579.4
    • Basepair signature: cWW-cWW-F-F
    • History status: Updated, 1 parent
    64
    101
    • HL_78254.1
    HL_78254.1
    • Basepair signature: cWW-F-F-F-F-F
    • History status: New id, 1 parent
  • T-loop related (1)
  • GNRA related (1)
  • 74
    102
    • HL_91503.5
    HL_91503.5
    • Basepair signature: cWW-F-F-F-F-F-F-F
    • History status: Exact match
    94
    103
    • HL_44439.1
    HL_44439.1
    • Basepair signature: cWW-F-F-F-F-F-F-F
    • History status: New id, > 2 parents
  • tRNA anticodon loop (3)
  • Anticodon loop related (1)
  • 94
    104
    • HL_83808.1
    HL_83808.1
    • Basepair signature: cWW-tWW-F-F-F
    • History status: Exact match
  • Pseudoknot (4)
  • 4
    105
    • HL_50142.2
    HL_50142.2
    • Basepair signature: cWW-F-F-F
    • History status: Exact match
  • GNRA variation (2)
  • 4
    106
    • HL_52085.1
    HL_52085.1
    • Basepair signature: cWW-F-F-F
    • History status: New id, 1 parent
    54
    107
    • HL_63154.1
    HL_63154.1
    • Basepair signature: cWW-tSW
    • History status: Exact match
    44
    108
    • HL_73268.1
    HL_73268.1
    • Basepair signature: cWW-F-F-cSS-cSS-F
    • History status: New id, 2 parents
    94
    109
    • HL_45036.1
    HL_45036.1
    • Basepair signature: cWW-F
    • History status: New id, > 2 parents
  • UNCG variation (1)
  • GNRA variation (1)
  • 34
    110
    • HL_86877.1
    HL_86877.1
    • Basepair signature: cWW-cSH-F-F-F-F-F-F
    • History status: Exact match
    94
    111
    • HL_01927.1
    HL_01927.1
    • Basepair signature: cWW-F-F-F-F-F
    • History status: New id, 2 parents
    74
    112
    • HL_60563.1
    HL_60563.1
    • Basepair signature: cWW-F
    • History status: New id, 2 parents
  • Mini UNCG (1)
  • T-loop related (1)
  • 34
    113
    • HL_84632.1
    HL_84632.1
    • Basepair signature: cWW-F-F-F-F-F-F
    • History status: New id, 1 parent
    84
    114
    • HL_19988.1
    HL_19988.1
    • Basepair signature: F-F-F-F-F-F-F-F
    • History status: New id, 2 parents
    84
    115
    • HL_84702.1
    HL_84702.1
    • Basepair signature: cWW-F-F-tHW-F-F-F-F
    • History status: New id, 1 parent
    104
    116
    • HL_74322.2
    HL_74322.2
    • Basepair signature: cWW-tSW-F
    • History status: Exact match
    54
    117
    • HL_20751.2
    HL_20751.2
    • Basepair signature: cWW-tHW-F-F-F-F-F-F-F-F-F
    • History status: Updated, 1 parent
    133
    118
    • HL_46766.2
    HL_46766.2
    • Basepair signature: cWW-tWH-F-F-F-F
    • History status: Exact match
    3
    119
    • HL_76846.1
    HL_76846.1
    • Basepair signature: cWW-F-F-F-F
    • History status: New id, 2 parents
  • GNRA (1)
  • 63
    120
    • HL_67667.2
    HL_67667.2
    • Basepair signature: cWW-F-F
    • History status: Updated, 1 parent
    43
    121
    • HL_73247.1
    HL_73247.1
    • Basepair signature: cWW-F-tWH-F-F-F-F-F-F-F-F-F-F
    • History status: Exact match
  • Pseudoknot geometry (3)
  • 153
    122
    • HL_51713.1
    HL_51713.1
    • Basepair signature: cWW-F-F-F
    • History status: New id, 1 parent
  • GNRA (1)
  • 53
    123
    • HL_67835.1
    HL_67835.1
    • Basepair signature: cWW-F-F
    • History status: New id, 2 parents
  • tRNA D-loop (3)
  • 43
    124
    • HL_48076.1
    HL_48076.1
    • Basepair signature: cWW-F-F-F-F-F-F-F
    • History status: New id, 1 parent
  • tRNA anticodon loop (2)
  • Anticodon loop related (1)
  • 93
    125
    • HL_86109.1
    HL_86109.1
    • Basepair signature: cWW-F-tWH-F-F-F-F-F-F-F
    • History status: Exact match
    123
    126
    • HL_12758.2
    HL_12758.2
    • Basepair signature: cWW-tSH-F-cHW-cWH-F-F-tSH-cWH-cHW-cWH-cHW-cWH-cWH-cHW-tSH-cHW-cWH-F-cWH
    • History status: Exact match
  • G-quadruplex (3)
  • 223
    127
    • HL_69465.1
    HL_69465.1
    • Basepair signature: cWW
    • History status: New id, 1 parent
    23
    128
    • HL_59735.2
    HL_59735.2
    • Basepair signature: cWW-F-F-F-F-F
    • History status: Updated, 1 parent
    73
    129
    • HL_04531.1
    HL_04531.1
    • Basepair signature: cWW-cWS-F
    • History status: New id, no parents
  • tRNA D-loop (2)
  • 3
    130
    • HL_52319.1
    HL_52319.1
    • Basepair signature: cWW-tSH-F-F-F-F-F-F
    • History status: New id, 1 parent
    103
    131
    • HL_45177.1
    HL_45177.1
    • Basepair signature: cWW-F-F-F
    • History status: New id, 1 parent
    3
    132
    • HL_50537.5
    HL_50537.5
    • Basepair signature: cWW-cWW-F-F
    • History status: Updated, 1 parent
  • tRNA anticodon loop with synthetase (3)
  • 63
    133
    • HL_02373.1
    HL_02373.1
    • Basepair signature: cWW-F-F-F-F-F-F-F-F-F-F-F-F-F
    • History status: New id, 1 parent
    3
    134
    • HL_88953.1
    HL_88953.1
    • Basepair signature: cWW-F-F-F-F-F
    • History status: New id, 2 parents
    73
    135
    • HL_09829.2
    HL_09829.2
    • Basepair signature: cWW-F
    • History status: Updated, 1 parent
    33
    136
    • HL_53504.1
    HL_53504.1
    • Basepair signature: cWW-tSH-F-F-F-F-F-F
    • History status: New id, 2 parents
    3
    137
    • HL_80621.1
    HL_80621.1
    • Basepair signature: cWW-cWS-F
    • History status: New id, 2 parents
  • UNCG related (2)
  • 53
    138
    • HL_20146.2
    HL_20146.2
    • Basepair signature: cWW-tSH-F-F
    • History status: Updated, 1 parent
    3
    139
    • HL_81205.2
    HL_81205.2
    • Basepair signature: cWW-cWW-tWH-F-tWH-F-F-F-F-F
    • History status: Exact match
    143
    140
    • HL_15708.4
    HL_15708.4
    • Basepair signature: cWW-F-F
    • History status: Updated, 1 parent
  • GNRA variation (1)
  • 53
    141
    • HL_31581.5
    HL_31581.5
    • Basepair signature: cWW-F-F-F-cSH-F-F-F-F
    • History status: Exact match
  • U1 small nuclear ribonucleoprotein A binding hairpin (1)
  • 113
    142
    • HL_36032.1
    HL_36032.1
    • Basepair signature: cWW-cWW
    • History status: New id, 1 parent
    43
    143
    • HL_61388.1
    HL_61388.1
    • Basepair signature: cWW-F
    • History status: New id, 2 parents
    32
    144
    • HL_90620.1
    HL_90620.1
    • Basepair signature: cWW-F-F-F-F-cSW-cSH-F
    • History status: Exact match
    112
    145
    • HL_98870.1
    HL_98870.1
    • Basepair signature: cWW-tSH-tWW-F-F-F-F-F
    • History status: Exact match
    112
    146
    • HL_03333.1
    HL_03333.1
    • Basepair signature: cWW-F-F-F-cSH-F
    • History status: Exact match
    82
    147
    • HL_73183.1
    HL_73183.1
    • Basepair signature: cWW-tSH-tHW-F-F-F-F-F-F-F-F-F
    • History status: Exact match
  • Pseudoknot geometry with G-bulge (2)
  • 152
    148
    • HL_21372.1
    HL_21372.1
    • Basepair signature: cWW-F-cSH-F-F
    • History status: New id, 1 parent
    72
    149
    • HL_51266.1
    HL_51266.1
    • Basepair signature: cWW-F-F-F-F
    • History status: New id, 1 parent
    62
    150
    • HL_81948.1
    HL_81948.1
    • Basepair signature: cWW-F-F-F-F
    • History status: New id, 1 parent
    62
    151
    • HL_03862.1
    HL_03862.1
    • Basepair signature: cWW-F-F-F-F-F-F
    • History status: New id, 1 parent
    82
    152
    • HL_07518.1
    HL_07518.1
    • Basepair signature: cWW-tSH-F
    • History status: Exact match
  • UNCG variation (1)
  • 2
    153
    • HL_73255.1
    HL_73255.1
    • Basepair signature: cWW-F-F-F-F-F-F
    • History status: Exact match
    82
    154
    • HL_62912.1
    HL_62912.1
    • Basepair signature: cWW-cWW-F-F
    • History status: New id, 1 parent
    62
    155
    • HL_33817.1
    HL_33817.1
    • Basepair signature: cWW-cWW-tSW-F-F
    • History status: Exact match
    72
    156
    • HL_86546.1
    HL_86546.1
    • Basepair signature: cWW-F-F
    • History status: New id, 2 parents
    42
    157
    • HL_01226.2
    HL_01226.2
    • Basepair signature: cWW-F-F-F-F-F
    • History status: Updated, 1 parent
    72
    158
    • HL_18747.1
    HL_18747.1
    • Basepair signature: cWW-F-F
    • History status: Exact match
    2
    159
    • HL_08510.1
    HL_08510.1
    • Basepair signature: cWW-F-F-cSH-F-F
    • History status: Exact match
    82
    160
    • HL_01876.1
    HL_01876.1
    • Basepair signature: cWW-F-F
    • History status: New id, 2 parents
    42
    161
    • HL_84221.1
    HL_84221.1
    • Basepair signature: cWW-F-F
    • History status: New id, 2 parents
    42
    162
    • HL_60293.1
    HL_60293.1
    • Basepair signature: cWW-cWH-F-cWH-cHW-cHW-cWH-cHW-cWH-F-cWH-cWH-cWH-F
    • History status: Exact match
  • G-quadruplex (2)
  • 182
    163
    • HL_08513.1
    HL_08513.1
    • Basepair signature: cWW-tSH-tSS-tHS-F-F-F-F-F-F-F-F-F-F-F
    • History status: New id, no parents
    182
    164
    • HL_64163.1
    HL_64163.1
    • Basepair signature: cWW-cWW-F-F-F-F-F-F-F-F
    • History status: Exact match
    2
    165
    • HL_30239.1
    HL_30239.1
    • Basepair signature: cWW-F-F
    • History status: Exact match
    42
    166
    • HL_84288.1
    HL_84288.1
    • Basepair signature: cWW-tWH-tWH-F-F-F-F
    • History status: Exact match
    102
    167
    • HL_73778.1
    HL_73778.1
    • Basepair signature: cWW-F
    • History status: Exact match
    32
    168
    • HL_87834.1
    HL_87834.1
    • Basepair signature: cWW-F-F-F-F-F
    • History status: New id, 2 parents
  • GNRA (1)
  • 72
    169
    • HL_23569.1
    HL_23569.1
    • Basepair signature: cWW-F-F-F-F-F-F
    • History status: New id, 1 parent
    82
    170
    • HL_79531.1
    HL_79531.1
    • Basepair signature: cWW-F-F
    • History status: Exact match
    42
    171
    • HL_04725.1
    HL_04725.1
    • Basepair signature: cWW-cWS-cWW-cWW-cWS
    • History status: New id, no parents
    82
    172
    • HL_50588.1
    HL_50588.1
    • Basepair signature: cWW-cWW-F-F-F-F-F-F-F-F-F-F-F-F-F
    • History status: New id, 1 parent
    2
    173
    • HL_73788.1
    HL_73788.1
    • Basepair signature: cWW-F-F-F
    • History status: New id, 1 parent
    52
    174
    • HL_40310.1
    HL_40310.1
    • Basepair signature: cWW-tSH-F-F-F
    • History status: Exact match
    72
    175
    • HL_45785.1
    HL_45785.1
    • Basepair signature: cWW-F-F-F-F-cSH-F-F
    • History status: Exact match
    112
    176
    • HL_57863.1
    HL_57863.1
    • Basepair signature: cWW-F-F-cWH-cWH-F
    • History status: New id, 1 parent
  • G-quadruplex fragment (2)
  • 92
    177
    • HL_05727.1
    HL_05727.1
    • Basepair signature: cWW-F-F-F
    • History status: Exact match
    52
    178
    • HL_72714.3
    HL_72714.3
    • Basepair signature: cWW-cWW-cWH-F-F-F-F-F
    • History status: Exact match
    112
    179
    • HL_10456.1
    HL_10456.1
    • Basepair signature: cWW-F-cWW-tWW-F-tHW-F-F-F-F-F-F-F
    • History status: New id, no parents
    172
    180
    • HL_41181.1
    HL_41181.1
    • Basepair signature: cWW-F-F-F
    • History status: New id, 2 parents
    52
    181
    • HL_55305.1
    HL_55305.1
    • Basepair signature: cWW-F-F-F-F-F
    • History status: Exact match
    72
    182
    • HL_81622.1
    HL_81622.1
    • Basepair signature: cWW-cWS-F-tSW-F-tSH-tSH-cWW-F-F
    • History status: New id, no parents
    142
    183
    • HL_02966.1
    HL_02966.1
    • Basepair signature: cWW-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F
    • History status: New id, no parents
    371
    184
    • HL_16395.1
    HL_16395.1
    • Basepair signature: cWW-F-F-F-F
    • History status: Exact match
    1
    185
    • HL_06766.1
    HL_06766.1
    • Basepair signature: cWW-F-F-F
    • History status: New id, 1 parent
    51
    186
    • HL_32255.1
    HL_32255.1
    • Basepair signature: cWW-tWW-F-F-cWW-F-F
    • History status: Exact match
    1
    187
    • HL_58224.1
    HL_58224.1
    • Basepair signature: cWW-F-F-F-F-F
    • History status: New id, 1 parent
    71
    188
    • HL_16843.1
    HL_16843.1
    • Basepair signature: cWW-F-cWH
    • History status: Exact match
    61
    189
    • HL_58539.1
    HL_58539.1
    • Basepair signature: cWW-tWS-F-tHW-F-F-F-F-F-F-F-F
    • History status: Exact match
    131
    190
    • HL_85993.1
    HL_85993.1
    • Basepair signature: cWW-F-F-F-F-F
    • History status: New id, 1 parent
    71
    191
    • HL_00317.1
    HL_00317.1
    • Basepair signature: cWW-F-cSS-F-F-F-F-F-F-F-F-F-F-F-F-F-F
    • History status: Exact match
    191
    192
    • HL_44294.1
    HL_44294.1
    • Basepair signature: cWW-F-F-F-F-F
    • History status: Exact match
    71
    193
    • HL_21400.1
    HL_21400.1
    • Basepair signature: cWW-tWH-tSW-cWW-cWH-cHW-cWH-cWH-cHW-cWH-cHW-cWH-cWH-cWH-cWH-cWH
    • History status: New id, no parents
  • G-quadruplex (1)
  • 181
    194
    • HL_36790.1
    HL_36790.1
    • Basepair signature: F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F
    • History status: New id, 1 parent
    181
    195
    • HL_56500.1
    HL_56500.1
    • Basepair signature: cWW-cWW-F-cSH-F-F
    • History status: Exact match
    91
    196
    • HL_68185.1
    HL_68185.1
    • Basepair signature: cWW-F-F-F-F
    • History status: New id, no parents
  • GNRA variation (1)
  • 61
    197
    • HL_16991.1
    HL_16991.1
    • Basepair signature: cWW-cWH-cWH-F-cWH-F
    • History status: Exact match
  • G-quadruplex fragment (1)
  • 81
    198
    • HL_59564.1
    HL_59564.1
    • Basepair signature: cWW-F-cSS-F-cSS-F-F-F-F-F-F-F-F-F-F-F-F
    • History status: Exact match
    201
    199
    • HL_21612.1
    HL_21612.1
    • Basepair signature: F-F-F-F-F-F-F
    • History status: New id, no parents
    71
    200
    • HL_12870.1
    HL_12870.1
    • Basepair signature: cWW-tHW-F-F-F-F-F-F-F-F-F
    • History status: Exact match
    121
    201
    • HL_50259.1
    HL_50259.1
    • Basepair signature: cWW-cWS-F-F
    • History status: New id, no parents
  • tRNA D-loop (1)
  • 61
    202
    • HL_92488.1
    HL_92488.1
    • Basepair signature: cWW-cWW-F-cSS-F-F-F-F-F-F
    • History status: Exact match
    131
    203
    • HL_13160.1
    HL_13160.1
    • Basepair signature: cWW-cWS-F-F-F-F
    • History status: Exact match
  • tRNA D-loop (1)
  • 81
    204
    • HL_56845.1
    HL_56845.1
    • Basepair signature: cWW-F-F-F-F-F-F-F-F-F-F-F-F-F-F
    • History status: Exact match
    141
    205
    • HL_70228.1
    HL_70228.1
    • Basepair signature: cWW-F-F-F-F-F
    • History status: Exact match
    51
    206
    • HL_50318.1
    HL_50318.1
    • Basepair signature: cWW-cSH-F-F
    • History status: Exact match
    61
    207
    • HL_23331.1
    HL_23331.1
    • Basepair signature: cWW-cWW-F-F-F-F
    • History status: New id, 1 parent
    1
    208
    • HL_94032.1
    HL_94032.1
    • Basepair signature: cWW-cSH-F-F-F-F-F-F
    • History status: Exact match
    1
    209
    • HL_13939.1
    HL_13939.1
    • Basepair signature: cWW-F-F-F-F-F-F-F-cSH
    • History status: New id, 1 parent
    111
    210
    • HL_57204.1
    HL_57204.1
    • Basepair signature: cWW-F-F-F
    • History status: Exact match
  • Mini UNCG related (1)
  • 31
    211
    • HL_04641.1
    HL_04641.1
    • Basepair signature: cWW-F-F-F-F-F
    • History status: Exact match
    71
    212
    • HL_34921.1
    HL_34921.1
    • Basepair signature: F-F-F-F-F-F-F-F-F-F
    • History status: New id, no parents
    101
    213
    • HL_08602.1
    HL_08602.1
    • Basepair signature: cWW-cSS-F-cSS-F-F-F-F-F
    • History status: Exact match
    111
    214
    • HL_70682.1
    HL_70682.1
    • Basepair signature: cWW-tWH-F-F-F-F
    • History status: Exact match
    81
    215
    • HL_60592.1
    HL_60592.1
    • Basepair signature: cWW-F-F-F
    • History status: Exact match
    51
    216
    • HL_66482.1
    HL_66482.1
    • Basepair signature: cWW-cWW-tWW-F-F-tWH-F-F-F-F-F-F-F-F
    • History status: New id, no parents
    181
    217
    • HL_97733.1
    HL_97733.1
    • Basepair signature: cWW-F-F-F-cSH-F
    • History status: Exact match
    81
    218
    • HL_02483.1
    HL_02483.1
    • Basepair signature: cWW-tWH-F-cSH-F-F-F
    • History status: Exact match
    101
    219
    • HL_35354.1
    HL_35354.1
    • Basepair signature: cWW-cWH-cHW-F-cWH-cHW-F-F-tHH-cWH-tWW-cWH-F-tWW-cWH-F-cWH
    • History status: Exact match
    211
    220
    • HL_02811.1
    HL_02811.1
    • Basepair signature: cWW-F-F
    • History status: Exact match
    41
    221
    • HL_84847.1
    HL_84847.1
    • Basepair signature: cWW-F-F-F-F-tWW-F-F-F-F-F-F
    • History status: Exact match
    141
    222
    • HL_50851.1
    HL_50851.1
    • Basepair signature: cWW-cWH-cWH-cWH-cWH-F
    • History status: Exact match
  • G-quadruplex fragment (1)
  • 91
    223
    • HL_60914.1
    HL_60914.1
    • Basepair signature: cWW-F
    • History status: Exact match
    31
    224
    • HL_98252.1
    HL_98252.1
    • Basepair signature: cWW-tWW-F-F-F-F
    • History status: Exact match
    81

    Coloring options:


    New id, 2 parents 41; Exact match 76; New id, > 2 parents 18; Updated, 1 parent 27; New id, 1 parent 41; New id, no parents 13; Updated, 2 parents 8;

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