7N2C | Motifs

109 Hairpin loops
179 Internal loops
26 Junction loops

Valid loops

#	loop id	location	annotation	motif
1	HL_7N2C_001 ➜	1/16/12:22	NA	NA
2	HL_7N2C_003 ➜	1/16/158:163	NA	NA
3	HL_7N2C_004 ➜	1/16/186:191	NA	NA
4	HL_7N2C_005 ➜	1/16/203:214	NA	NA
5	HL_7N2C_006 ➜	1/16/259:267	NA	NA
6	HL_7N2C_007 ➜	1/16/296:301	NA	NA
7	HL_7N2C_008 ➜	1/16/320:333	NA	NA
8	HL_7N2C_009 ➜	1/16/342:347	NA	NA
9	HL_7N2C_010 ➜	1/16/379:384	NA	NA
10	HL_7N2C_011 ➜	1/16/419:424	NA	NA
11	HL_7N2C_012 ➜	1/16/462:470	NA	NA
12	HL_7N2C_013 ➜	1/16/521:528	NA	NA
13	HL_7N2C_014 ➜	1/16/617:623	NA	NA
14	HL_7N2C_015 ➜	1/16/689:698	NA	NA
15	HL_7N2C_016 ➜	1/16/726:731	NA	NA
16	HL_7N2C_017 ➜	1/16/786:796	NA	NA
17	HL_7N2C_018 ➜	1/16/840:846	NA	NA
18	HL_7N2C_019 ➜	1/16/862:867	NA	NA
19	HL_7N2C_020 ➜	1/16/897:902	NA	NA
20	HL_7N2C_021 ➜	1/16/963:972	NA	NA
21	HL_7N2C_022 ➜	1/16/1012:1017	NA	NA
22	HL_7N2C_023 ➜	1/16/1028:1033	NA	NA
23	HL_7N2C_024 ➜	1/16/1076:1081	NA	NA
24	HL_7N2C_025 ➜	1/16/1089:1096	NA	NA
25	HL_7N2C_026 ➜	1/16/1134:1140	NA	NA
26	HL_7N2C_027 ➜	1/16/1165:1171	NA	NA
27	HL_7N2C_028 ➜	1/16/1265:1270	NA	NA
28	HL_7N2C_029 ➜	1/16/1314:1323	NA	NA
29	HL_7N2C_030 ➜	1/16/1356:1366	NA	NA
30	HL_7N2C_031 ➜	1/16/1449:1454	NA	NA
31	HL_7N2C_032 ➜	1/16/1515:1520	NA	NA
32	HL_7N2C_033 ➜	1/23/59:68	NA	NA
33	HL_7N2C_034 ➜	1/23/87:95	NA	NA
34	HL_7N2C_035 ➜	1/23/123:128	NA	NA
35	HL_7N2C_036 ➜	1/23/137:142	NA	NA
36	HL_7N2C_037 ➜	1/23/158:168	NA	NA
37	HL_7N2C_038 ➜	1/23/194:201	NA	NA
38	HL_7N2C_039 ➜	1/23/225:230	NA	NA
39	HL_7N2C_040 ➜	1/23/246:252	NA	NA
40	HL_7N2C_041 ➜	1/23/305:312	NA	NA
41	HL_7N2C_042 ➜	1/23/319:323	NA	NA
42	HL_7N2C_043 ➜	1/23/327:335	NA	NA
43	HL_7N2C_044 ➜	1/23/382:392	NA	NA
44	HL_7N2C_045 ➜	1/23/410:417	NA	NA
45	HL_7N2C_046 ➜	1/23/462:467	NA	NA
46	HL_7N2C_047 ➜	1/23/487:493	NA	NA
47	HL_7N2C_048 ➜	1/23/544:549	NA	NA
48	HL_7N2C_049 ➜	1/23/566:575	NA	NA
49	HL_7N2C_050 ➜	1/23/611:617	NA	NA
50	HL_7N2C_051 ➜	1/23/629:634	NA	NA
51	HL_7N2C_052 ➜	1/23/641:647	NA	NA
52	HL_7N2C_053 ➜	1/23/711:720	NA	NA
53	HL_7N2C_054 ➜	1/23/744:753	NA	NA
54	HL_7N2C_055 ➜	1/23/779:785	NA	NA
55	HL_7N2C_056 ➜	1/23/826:831	NA	NA
56	HL_7N2C_057 ➜	1/23/884:892	NA	NA
57	HL_7N2C_058 ➜	1/23/954:963	NA	NA
58	HL_7N2C_059 ➜	1/23/978:985	NA	NA
59	HL_7N2C_060 ➜	1/23/1064:1074	NA	NA
60	HL_7N2C_061 ➜	1/23/1092:1099	NA	NA
61	HL_7N2C_062 ➜	1/23/1172:1177	NA	NA
62	HL_7N2C_063 ➜	1/23/1222:1227	NA	NA
63	HL_7N2C_064 ➜	1/23/1281:1289	NA	NA
64	HL_7N2C_065 ➜	1/23/1324:1330	NA	NA
65	HL_7N2C_066 ➜	1/23/1363:1368	NA	NA
66	HL_7N2C_067 ➜	1/23/1389:1398	NA	NA
67	HL_7N2C_068 ➜	1/23/1451:1459	NA	NA
68	HL_7N2C_069 ➜	1/23/1492:1498	NA	NA
69	HL_7N2C_070 ➜	1/23/1531:1540	NA	NA
70	HL_7N2C_071 ➜	1/23/1565:1568	NA	NA
71	HL_7N2C_072 ➜	1/23/1612:1619	NA	NA
72	HL_7N2C_073 ➜	1/23/1630:1636	NA	NA
73	HL_7N2C_074 ➜	1/23/1691:1696	NA	NA
74	HL_7N2C_075 ➜	1/23/1728:1731	NA	NA
75	HL_7N2C_076 ➜	1/23/1752:1756	NA	NA
76	HL_7N2C_077 ➜	1/23/1777:1787	NA	NA
77	HL_7N2C_078 ➜	1/23/1806:1811	NA	NA
78	HL_7N2C_079 ➜	1/23/1868:1873	NA	NA
79	HL_7N2C_080 ➜	1/23/1910:1920	NA	NA
80	HL_7N2C_081 ➜	1/23/1949:1957	NA	NA
81	HL_7N2C_082 ➜	1/23/2027:2036	NA	NA
82	HL_7N2C_083 ➜	1/23/2143:2148	NA	NA
83	HL_7N2C_084 ➜	1/23/2209:2215	NA	NA
84	HL_7N2C_085 ➜	1/23/2248:2256	NA	NA
85	HL_7N2C_086 ➜	1/23/2264:2276	NA	NA
86	HL_7N2C_087 ➜	1/23/2303:2313	NA	NA
87	HL_7N2C_088 ➜	1/23/2324:2331	NA	NA
88	HL_7N2C_089 ➜	1/23/2356:2361	NA	NA
89	HL_7N2C_090 ➜	1/23/2374:2379	NA	NA
90	HL_7N2C_091 ➜	1/23/2404:2413	NA	NA
91	HL_7N2C_092 ➜	1/23/2471:2479	NA	NA
92	HL_7N2C_093 ➜	1/23/2528:2535	NA	NA
93	HL_7N2C_094 ➜	1/23/2551:2557	NA	NA
94	HL_7N2C_095 ➜	1/23/2594:2599	NA	NA
95	HL_7N2C_096 ➜	1/23/2658:2663	NA	NA
96	HL_7N2C_097 ➜	1/23/2701:2706	NA	NA
97	HL_7N2C_098 ➜	1/23/2745:2759	NA	NA
98	HL_7N2C_099 ➜	1/23/2795:2801	NA	NA
99	HL_7N2C_100 ➜	1/23/2819:2827	NA	NA
100	HL_7N2C_101 ➜	1/23/2856:2861	NA	NA
101	HL_7N2C_102 ➜	1/5/38:44	NA	NA
102	HL_7N2C_103 ➜	1/5/86:90	NA	NA
103	HL_7N2C_104 ➜	1/Dt/13:22	NA	NA
104	HL_7N2C_105 ➜	1/Dt/30:40	NA	NA
105	HL_7N2C_106 ➜	1/Dt/53:61	NA	NA
106	HL_7N2C_107 ➜	1/Pt/13:22	NA	NA
107	HL_7N2C_108 ➜	1/Pt/30:40	NA	NA
108	HL_7N2C_109 ➜	1/Pt/53:61	NA	NA

Problematic loops

#	loop id	Problem	Sequence
1	HL_7N2C_002 ➜	missing nts	NA

Valid loops

#	loop id	location	annotation	motif
1	IL_7N2C_001 ➜	1/16/30:32,1/16/552:553	NA	NA
2	IL_7N2C_002 ➜	1/16/44:45,1/16/396:398	NA	NA
3	IL_7N2C_003 ➜	1/16/47:52,1/16/359:361	NA	NA
4	IL_7N2C_004 ➜	1/16/54:56,1/16/356:357	NA	NA
5	IL_7N2C_005 ➜	1/16/63:66,1/16/103:104	NA	NA
6	IL_7N2C_006 ➜	1/16/67:69,1/16/99:102	NA	NA
7	IL_7N2C_007 ➜	1/16/70:73,1/16/97:98	NA	NA
8	IL_7N2C_008 ➜	1/16/75:77,1/16/92:95	NA	NA
9	IL_7N2C_009 ➜	1/16/128:131,1/16/231:233	NA	NA
10	IL_7N2C_010 ➜	1/16/132:136,1/16/227:230	NA	NA
11	IL_7N2C_011 ➜	1/16/144:146,1/16/176:178	NA	NA
12	IL_7N2C_012 ➜	1/16/147:153,1/16/168:175	NA	NA
13	IL_7N2C_013 ➜	1/16/242:247,1/16/277:284	NA	NA
14	IL_7N2C_014 ➜	1/16/249:252,1/16/274:275	NA	NA
15	IL_7N2C_015 ➜	1/16/292:293,1/16/304:308	NA	NA
16	IL_7N2C_016 ➜	1/16/367:369,1/16/392:393	NA	NA
17	IL_7N2C_017 ➜	1/16/371:375,1/16/389:390	NA	NA
18	IL_7N2C_018 ➜	1/16/375:376,1/16/387:389	NA	NA
19	IL_7N2C_019 ➜	1/16/409:416,1/16/427:433	NA	NA
20	IL_7N2C_020 ➜	1/16/440:442,1/16/492:497	NA	NA
21	IL_7N2C_021 ➜	1/16/446:450,1/16/483:488	NA	NA
22	IL_7N2C_022 ➜	1/16/450:455,1/16/477:483	NA	NA
23	IL_7N2C_023 ➜	1/16/504:511,1/16/540:541	NA	NA
24	IL_7N2C_024 ➜	1/16/515:521,1/16/528:536	NA	NA
25	IL_7N2C_025 ➜	1/16/569:575,1/16/880:881	NA	NA
26	IL_7N2C_026 ➜	1/16/580:584,1/16/757:761	NA	NA
27	IL_7N2C_027 ➜	1/16/594:596,1/16/644:645	NA	NA
28	IL_7N2C_028 ➜	1/16/597:598,1/16/640:643	NA	NA
29	IL_7N2C_029 ➜	1/16/605:612,1/16/628:633	NA	NA
30	IL_7N2C_030 ➜	1/16/654:655,1/16/751:754	NA	NA
31	IL_7N2C_031 ➜	1/16/659:660,1/16/745:747	NA	NA
32	IL_7N2C_032 ➜	1/16/662:666,1/16/740:743	NA	NA
33	IL_7N2C_033 ➜	1/16/673:678,1/16/712:717	NA	NA
34	IL_7N2C_034 ➜	1/16/684:688,1/16/699:706	NA	NA
35	IL_7N2C_035 ➜	1/16/774:778,1/16/804:805	NA	NA
36	IL_7N2C_036 ➜	1/16/779:783,1/16/799:803	NA	NA
37	IL_7N2C_037 ➜	1/16/887:894,1/16/905:910	NA	NA
38	IL_7N2C_038 ➜	1/16/922:923,1/16/1393:1395	NA	NA
39	IL_7N2C_039 ➜	1/16/925:927,1/16/1390:1391	NA	NA
40	IL_7N2C_040 ➜	1/16/933:935,1/16/1380:1384	NA	NA
41	IL_7N2C_041 ➜	1/16/953:954,1/16/1226:1228	NA	NA
42	IL_7N2C_042 ➜	1/16/993:997,1/16/1044:1045	NA	NA
43	IL_7N2C_043 ➜	1/16/998:999,1/16/1041:1043	NA	NA
44	IL_7N2C_044 ➜	1/16/1048:1050,1/16/1208:1209	NA	NA
45	IL_7N2C_045 ➜	1/16/1052:1056,1/16/1204:1206	NA	NA
46	IL_7N2C_046 ➜	1/16/1057:1058,1/16/1199:1203	NA	NA
47	IL_7N2C_047 ➜	1/16/1060:1061,1/16/1195:1197	NA	NA
48	IL_7N2C_048 ➜	1/16/1061:1063,1/16/1193:1195	NA	NA
49	IL_7N2C_049 ➜	1/16/1124:1128,1/16/1144:1149	NA	NA
50	IL_7N2C_050 ➜	1/16/1129:1132,1/16/1142:1143	NA	NA
51	IL_7N2C_051 ➜	1/16/1158:1161,1/16/1175:1181	NA	NA
52	IL_7N2C_052 ➜	1/16/1247:1253,1/16/1284:1290	NA	NA
53	IL_7N2C_053 ➜	1/16/1255:1258,1/16/1277:1282	NA	NA
54	IL_7N2C_054 ➜	1/16/1259:1263,1/16/1272:1276	NA	NA
55	IL_7N2C_055 ➜	1/16/1303:1308,1/16/1329:1334	NA	NA
56	IL_7N2C_056 ➜	1/16/1399:1401,1/16/1501:1504	NA	NA
57	IL_7N2C_057 ➜	1/16/1401:1404,1/16/1497:1501	NA	NA
58	IL_7N2C_058 ➜	1/16/1405:1409,1/16/1491:1496	NA	NA
59	IL_7N2C_059 ➜	1/16/1412:1414,1/16/1486:1488	NA	NA
60	IL_7N2C_060 ➜	1/16/1416:1419,1/16/1481:1484	NA	NA
61	IL_7N2C_061 ➜	1/16/1430:1435,1/16/1466:1470	NA	NA
62	IL_7N2C_062 ➜	1/16/1440:1442,1/16/1460:1461	NA	NA
63	IL_7N2C_063 ➜	1/16/1445:1448,1/16/1455:1457	NA	NA
64	IL_7N2C_064 ➜	1/23/24:30,1/23/510:516	NA	NA
65	IL_7N2C_065 ➜	1/23/36:37,1/23/442:444	NA	NA
66	IL_7N2C_066 ➜	1/23/43:44,1/23/434:436	NA	NA
67	IL_7N2C_067 ➜	1/23/81:85,1/23/97:105	NA	NA
68	IL_7N2C_068 ➜	1/23/183:184,1/23/212:214	NA	NA
69	IL_7N2C_069 ➜	1/23/188:194,1/23/201:208	NA	NA
70	IL_7N2C_070 ➜	1/23/239:245,1/23/253:258	NA	NA
71	IL_7N2C_071 ➜	1/23/269:271,1/23/366:370	NA	NA
72	IL_7N2C_072 ➜	1/23/274:281,1/23/359:363	NA	NA
73	IL_7N2C_073 ➜	1/23/293:295,1/23/343:347	NA	NA
74	IL_7N2C_074 ➜	1/23/481:484,1/23/496:509	NA	NA
75	IL_7N2C_075 ➜	1/23/536:539,1/23/554:557	NA	NA
76	IL_7N2C_076 ➜	1/23/564:566,1/23/575:577	NA	NA
77	IL_7N2C_077 ➜	1/23/606:610,1/23/618:622	NA	NA
78	IL_7N2C_078 ➜	1/23/672:674,1/23/806:808	NA	NA
79	IL_7N2C_079 ➜	1/23/674:678,1/23/799:806	NA	NA
80	IL_7N2C_080 ➜	1/23/697:698,1/23/763:765	NA	NA
81	IL_7N2C_081 ➜	1/23/702:703,1/23/728:730	NA	NA
82	IL_7N2C_082 ➜	1/23/703:707,1/23/724:728	NA	NA
83	IL_7N2C_083 ➜	1/23/738:740,1/23/757:758	NA	NA
84	IL_7N2C_084 ➜	1/23/775:777,1/23/787:791	NA	NA
85	IL_7N2C_085 ➜	1/23/844:847,1/23/933:934	NA	NA
86	IL_7N2C_086 ➜	1/23/847:848,1/23/930:933	NA	NA
87	IL_7N2C_087 ➜	1/23/850:851,1/23/926:928	NA	NA
88	IL_7N2C_088 ➜	1/23/856:862,1/23/915:921	NA	NA
89	IL_7N2C_089 ➜	1/23/862:863,1/23/913:915	NA	NA
90	IL_7N2C_090 ➜	1/23/864:868,1/23/909:912	NA	NA
91	IL_7N2C_091 ➜	1/23/870:872,1/23/905:907	NA	NA
92	IL_7N2C_092 ➜	1/23/875:879,1/23/898:902	NA	NA
93	IL_7N2C_093 ➜	1/23/880:883,1/23/893:897	NA	NA
94	IL_7N2C_094 ➜	1/23/994:996,1/23/1159:1160	NA	NA
95	IL_7N2C_095 ➜	1/23/998:1002,1/23/1153:1157	NA	NA
96	IL_7N2C_096 ➜	1/23/1004:1011,1/23/1150:1151	NA	NA
97	IL_7N2C_097 ➜	1/23/1011:1013,1/23/1149:1150	NA	NA
98	IL_7N2C_098 ➜	1/23/1018:1024,1/23/1140:1144	NA	NA
99	IL_7N2C_099 ➜	1/23/1024:1030,1/23/1124:1140	NA	NA
100	IL_7N2C_100 ➜	1/23/1031:1034,1/23/1121:1123	NA	NA
101	IL_7N2C_101 ➜	1/23/1038:1041,1/23/1114:1117	NA	NA
102	IL_7N2C_102 ➜	1/23/1043:1051,1/23/1108:1112	NA	NA
103	IL_7N2C_103 ➜	1/23/1059:1062,1/23/1076:1079	NA	NA
104	IL_7N2C_104 ➜	1/23/1087:1090,1/23/1101:1102	NA	NA
105	IL_7N2C_105 ➜	1/23/1196:1198,1/23/1247:1250	NA	NA
106	IL_7N2C_106 ➜	1/23/1202:1206,1/23/1240:1243	NA	NA
107	IL_7N2C_107 ➜	1/23/1208:1215,1/23/1234:1238	NA	NA
108	IL_7N2C_108 ➜	1/23/1262:1269,1/23/2011:2017	NA	NA
109	IL_7N2C_109 ➜	1/23/1310:1313,1/23/1603:1604	NA	NA
110	IL_7N2C_110 ➜	1/23/1319:1323,1/23/1331:1333	NA	NA
111	IL_7N2C_111 ➜	1/23/1351:1355,1/23/1376:1380	NA	NA
112	IL_7N2C_112 ➜	1/23/1357:1361,1/23/1370:1374	NA	NA
113	IL_7N2C_113 ➜	1/23/1415:1416,1/23/1582:1587	NA	NA
114	IL_7N2C_114 ➜	1/23/1417:1421,1/23/1577:1581	NA	NA
115	IL_7N2C_115 ➜	1/23/1432:1435,1/23/1557:1561	NA	NA
116	IL_7N2C_116 ➜	1/23/1437:1440,1/23/1551:1555	NA	NA
117	IL_7N2C_117 ➜	1/23/1450:1451,1/23/1459:1461	NA	NA
118	IL_7N2C_118 ➜	1/23/1468:1471,1/23/1520:1524	NA	NA
119	IL_7N2C_119 ➜	1/23/1474:1478,1/23/1513:1517	NA	NA
120	IL_7N2C_120 ➜	1/23/1481:1482,1/23/1507:1510	NA	NA
121	IL_7N2C_121 ➜	1/23/1489:1491,1/23/1499:1500	NA	NA
122	IL_7N2C_122 ➜	1/23/1526:1529,1/23/1542:1546	NA	NA
123	IL_7N2C_123 ➜	1/23/1651:1656,1/23/2004:2006	NA	NA
124	IL_7N2C_124 ➜	1/23/1663:1665,1/23/1995:1997	NA	NA
125	IL_7N2C_125 ➜	1/23/1666:1669,1/23/1993:1994	NA	NA
126	IL_7N2C_126 ➜	1/23/1669:1674,1/23/1990:1993	NA	NA
127	IL_7N2C_127 ➜	1/23/1686:1691,1/23/1696:1702	NA	NA
128	IL_7N2C_128 ➜	1/23/1712:1718,1/23/1742:1746	NA	NA
129	IL_7N2C_129 ➜	1/23/1720:1724,1/23/1736:1740	NA	NA
130	IL_7N2C_130 ➜	1/23/1727:1728,1/23/1731:1733	NA	NA
131	IL_7N2C_131 ➜	1/23/1770:1771,1/23/1980:1982	NA	NA
132	IL_7N2C_132 ➜	1/23/1798:1804,1/23/1813:1821	NA	NA
133	IL_7N2C_133 ➜	1/23/1837:1840,1/23/1902:1903	NA	NA
134	IL_7N2C_134 ➜	1/23/1841:1842,1/23/1898:1901	NA	NA
135	IL_7N2C_135 ➜	1/23/1846:1849,1/23/1893:1894	NA	NA
136	IL_7N2C_136 ➜	1/23/1864:1867,1/23/1874:1878	NA	NA
137	IL_7N2C_137 ➜	1/23/1933:1934,1/23/1964:1967	NA	NA
138	IL_7N2C_138 ➜	1/23/1934:1945,1/23/1961:1964	NA	NA
139	IL_7N2C_139 ➜	1/23/2050:2052,1/23/2617:2618	NA	NA
140	IL_7N2C_140 ➜	1/23/2054:2056,1/23/2612:2615	NA	NA
141	IL_7N2C_141 ➜	1/23/2064:2066,1/23/2444:2446	NA	NA
142	IL_7N2C_142 ➜	1/23/2067:2070,1/23/2441:2443	NA	NA
143	IL_7N2C_143 ➜	1/23/2070:2071,1/23/2438:2441	NA	NA
144	IL_7N2C_144 ➜	1/23/2081:2083,1/23/2236:2239	NA	NA
145	IL_7N2C_145 ➜	1/23/2085:2087,1/23/2232:2234	NA	NA
146	IL_7N2C_146 ➜	1/23/2103:2105,1/23/2184:2186	NA	NA
147	IL_7N2C_147 ➜	1/23/2108:2110,1/23/2179:2181	NA	NA
148	IL_7N2C_148 ➜	1/23/2110:2116,1/23/2164:2179	NA	NA
149	IL_7N2C_149 ➜	1/23/2116:2127,1/23/2161:2164	NA	NA
150	IL_7N2C_150 ➜	1/23/2129:2136,1/23/2155:2159	NA	NA
151	IL_7N2C_151 ➜	1/23/2202:2204,1/23/2220:2221	NA	NA
152	IL_7N2C_152 ➜	1/23/2297:2299,1/23/2317:2321	NA	NA
153	IL_7N2C_153 ➜	1/23/2350:2353,1/23/2364:2367	NA	NA
154	IL_7N2C_154 ➜	1/23/2401:2403,1/23/2414:2415	NA	NA
155	IL_7N2C_155 ➜	1/23/2453:2455,1/23/2496:2500	NA	NA
156	IL_7N2C_156 ➜	1/23/2456:2459,1/23/2493:2495	NA	NA
157	IL_7N2C_157 ➜	1/23/2459:2461,1/23/2489:2493	NA	NA
158	IL_7N2C_158 ➜	1/23/2466:2470,1/23/2480:2484	NA	NA
159	IL_7N2C_159 ➜	1/23/2507:2509,1/23/2579:2582	NA	NA
160	IL_7N2C_160 ➜	1/23/2510:2512,1/23/2574:2578	NA	NA
161	IL_7N2C_161 ➜	1/23/2512:2513,1/23/2571:2574	NA	NA
162	IL_7N2C_162 ➜	1/23/2522:2523,1/23/2540:2543	NA	NA
163	IL_7N2C_163 ➜	1/23/2588:2591,1/23/2603:2606	NA	NA
164	IL_7N2C_164 ➜	1/23/2591:2592,1/23/2601:2603	NA	NA
165	IL_7N2C_165 ➜	1/23/2636:2640,1/23/2774:2782	NA	NA
166	IL_7N2C_166 ➜	1/23/2652:2658,1/23/2663:2668	NA	NA
167	IL_7N2C_167 ➜	1/23/2680:2684,1/23/2725:2727	NA	NA
168	IL_7N2C_168 ➜	1/23/2687:2691,1/23/2718:2722	NA	NA
169	IL_7N2C_169 ➜	1/23/2695:2696,1/23/2711:2714	NA	NA
170	IL_7N2C_170 ➜	1/23/2737:2742,1/23/2762:2767	NA	NA
171	IL_7N2C_171 ➜	1/23/2806:2811,1/23/2889:2892	NA	NA
172	IL_7N2C_172 ➜	1/23/2838:2839,1/23/2878:2880	NA	NA
173	IL_7N2C_173 ➜	1/23/2843:2846,1/23/2870:2874	NA	NA
174	IL_7N2C_174 ➜	1/23/2847:2852,1/23/2865:2869	NA	NA
175	IL_7N2C_175 ➜	1/5/17:18,1/5/65:67	NA	NA
176	IL_7N2C_176 ➜	1/5/23:28,1/5/56:60	NA	NA
177	IL_7N2C_177 ➜	1/5/30:31,1/5/51:54	NA	NA
178	IL_7N2C_178 ➜	1/5/34:38,1/5/44:48	NA	NA
179	IL_7N2C_179 ➜	1/5/71:79,1/5/97:105	NA	NA

Problematic loops

No problematic loops

Valid loops

#	loop id	location	annotation	motif
1	J3_7N2C_001 ➜	1/16/46:47,1/16/361:367,1/16/393:395	NA	NA
2	J3_7N2C_002 ➜	1/16/586:588,1/16/651:654,1/16/754:755	NA	NA
3	J3_7N2C_003 ➜	1/16/672:673,1/16/717:725,1/16/732:734	NA	NA
4	J3_7N2C_004 ➜	1/16/826:829,1/16/857:861,1/16/868:874	NA	NA
5	J3_7N2C_005 ➜	1/16/943:946,1/16/1235:1237,1/16/1337:1340	NA	NA
6	J3_7N2C_006 ➜	1/16/955:962,1/16/973:984,1/16/1221:1225	NA	NA
7	J3_7N2C_007 ➜	1/16/990:993,1/16/1045:1047,1/16/1210:1215	NA	NA
8	J3_7N2C_008 ➜	1/16/1003:1006,1/16/1023:1027,1/16/1034:1037	NA	NA
9	J3_7N2C_009 ➜	1/16/1063:1068,1/16/1107:1113,1/16/1187:1193	NA	NA
10	J3_7N2C_010 ➜	1/16/1073:1074,1/16/1083:1087,1/16/1098:1102	NA	NA
11	J3_7N2C_011 ➜	1/16/1116:1118,1/16/1155:1158,1/16/1181:1184	NA	NA
12	J3_7N2C_012 ➜	1/16/1237:1241,1/16/1296:1303,1/16/1334:1337	NA	NA
13	J3_7N2C_013 ➜	1/23/30:31,1/23/474:481,1/23/509:510	NA	NA
14	J3_7N2C_014 ➜	1/23/56:57,1/23/70:76,1/23/110:114	NA	NA
15	J3_7N2C_015 ➜	1/23/683:689,1/23/773:775,1/23/791:794	NA	NA
16	J3_7N2C_016 ➜	1/23/698:700,1/23/732:736,1/23/760:763	NA	NA
17	J3_7N2C_017 ➜	1/23/1055:1057,1/23/1081:1087,1/23/1102:1104	NA	NA
18	J3_7N2C_018 ➜	1/23/1298:1303,1/23/1625:1627,1/23/1639:1642	NA	NA
19	J3_7N2C_019 ➜	1/23/1306:1309,1/23/1605:1611,1/23/1620:1622	NA	NA
20	J3_7N2C_020 ➜	1/23/1344:1349,1/23/1382:1385,1/23/1402:1403	NA	NA
21	J3_7N2C_021 ➜	1/23/2091:2093,1/23/2196:2200,1/23/2223:2228	NA	NA
22	J3_7N2C_022 ➜	1/23/2295:2297,1/23/2321:2323,1/23/2332:2337	NA	NA
23	J3_7N2C_023 ➜	1/23/2517:2520,1/23/2545:2547,1/23/2561:2567	NA	NA
24	J3_7N2C_024 ➜	1/23/2789:2791,1/23/2805:2806,1/23/2892:2894	NA	NA
25	J3_7N2C_025 ➜	1/23/2812:2815,1/23/2831:2836,1/23/2882:2888	NA	NA
26	J3_7N2C_026 ➜	1/5/10:16,1/5/68:70,1/5/106:110	NA	NA

Problematic loops

No problematic loops

Coloring options: Nucleotide numbers

7N2C Internal, Hairpin and 3-way Junction Loop Motifs

Valid loops

Problematic loops

Valid loops

Problematic loops

Valid loops

Problematic loops