RNA 3D Hub //

1K8A Hairpin, Internal, and multi-helix Junction Loop Motifs

Download loops

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
HL_1K8A_0011/A/55:64Pseudoknot with intercalation
homologous
HL_4V9F_001
HL_93438.2
HL_1K8A_0021/A/83:91Pseudoknot geometry
homologous
HL_4V9F_002
HL_93324.4
HL_1K8A_0031/A/118:122No text annotation
homologous
HL_4V9F_003
HL_75660.5
HL_1K8A_0051/A/136:142No text annotation
homologous
HL_4V9F_005
HL_87954.2
HL_1K8A_0061/A/164:171No text annotation
geometric
HL_4V9F_006
HL_30068.2
HL_1K8A_0071/A/195:201No text annotation
homologous
HL_4V9F_007
HL_04783.2
HL_1K8A_0081/A/217:223No text annotation
homologous
HL_4V9F_008
HL_37369.2
HL_1K8A_0091/A/252:257GNRA
homologous
HL_4V9F_009
HL_37824.7
HL_1K8A_0101/A/312:319T-loop with 2 stacked bulged bases
homologous
HL_4V9F_010
HL_01609.3
HL_1K8A_0111/A/326:330No text annotation
homologous
HL_4V9F_011
HL_75660.5
HL_1K8A_0121/A/334:342T-loop with unstacked turn
homologous
HL_4V9F_012
HL_27670.2
HL_1K8A_0131/A/390:399No text annotation
homologous
HL_4V9F_013
HL_87463.1
HL_1K8A_0141/A/416:424Pseudoknot geometry
homologous
HL_4V9F_014
HL_93324.4
HL_1K8A_0151/A/468:473GNRA
homologous
HL_4V9F_015
HL_37824.7
HL_1K8A_0161/A/493:499GNRA
homologous
HL_4V9F_016
HL_37824.7
HL_1K8A_0171/A/576:581GNRA
homologous
HL_4V9F_017
HL_37824.7
HL_1K8A_0181/A/623:632No text annotation
geometric
HL_7RQB_018
NA
HL_1K8A_0191/A/670:676No text annotation
homologous
HL_4V9F_019
HL_80922.2
HL_1K8A_0201/A/690:695GNRA
homologous
HL_4V9F_020
HL_37824.7
HL_1K8A_0221/A/733:738GNRA
homologous
HL_4V9F_022
HL_37824.7
HL_1K8A_0231/A/804:809GNRA
homologous
HL_4V9F_023
HL_37824.7
HL_1K8A_0241/A/837:846No text annotation
homologous
HL_4V9F_024
HL_88205.2
HL_1K8A_0251/A/872:878No text annotation
homologous
HL_4V9F_025
HL_87954.2
HL_1K8A_0261/A/919:924No text annotation
homologous
HL_4V9F_026
HL_55195.3
HL_1K8A_0281/A/1054:1060GNRA
homologous
HL_4V9F_028
HL_37824.7
HL_1K8A_0291/A/1076:1083No text annotation
homologous
HL_4V9F_029
HL_42998.2
HL_1K8A_0311/A/1196:1203GNRA wlth tandem sheared
homologous
HL_5D8H_002
HL_81538.2
HL_1K8A_0321/A/1274:1282Anticodon loop related
homologous
HL_4V9F_032
HL_77082.1
HL_1K8A_0331/A/1326:1331GNRA
homologous
HL_4V9F_033
HL_37824.7
HL_1K8A_0341/A/1387:1395T-loop with 2 stacked bulged bases
homologous
HL_4V9F_034
HL_28252.6
HL_1K8A_0351/A/1430:1436Pseudoknot geometry with 3' bulge
homologous
HL_4V9F_035
HL_57176.2
HL_1K8A_0361/A/1468:1474GNRA
homologous
HL_4V9F_036
HL_37824.7
HL_1K8A_0371/A/1498:1507No text annotation
homologous
HL_4V9F_037
HL_81545.2
HL_1K8A_0391/A/1594:1600Other HL
homologous
HL_4V9F_039
HL_77436.5
HL_1K8A_0401/A/1628:1633GNRA
homologous
HL_4V9F_040
HL_37824.7
HL_1K8A_0411/A/1651:1655Mini UNCG
homologous
HL_4V9F_041
HL_48778.2
HL_1K8A_0421/A/1687:1694No text annotation
homologous
HL_4V9F_042
HL_89567.2
HL_1K8A_0431/A/1705:1713GNRA wlth tandem sheared
homologous
HL_4V9F_043
HL_81538.2
HL_1K8A_0441/A/1769:1774UNCG
homologous
HL_4V9F_044
HL_34617.5
HL_1K8A_0451/A/1793:1799GNRA
homologous
HL_4V9F_045
HL_37824.7
HL_1K8A_0461/A/1808:1812No text annotation
homologous
HL_4V9F_046
HL_80709.3
HL_1K8A_0471/A/1833:1843No text annotation
homologous
HL_4V9F_047
HL_01962.2
HL_1K8A_0481/A/1862:1867GNRA
homologous
HL_4V9F_048
HL_37824.7
HL_1K8A_0491/A/1916:1923GNRA related
homologous
HL_4V9F_049
HL_77436.5
HL_1K8A_0511/A/1990:1998No text annotation
homologous
HL_4V9F_051
HL_20167.2
HL_1K8A_0521/A/2068:2077No text annotation
homologous
HL_4V9F_052
HL_61996.2
HL_1K8A_0541/A/2248:2253GNRA
homologous
HL_4V9F_054
HL_37824.7
HL_1K8A_0551/A/2281:2289No text annotation
homologous
HL_4V9F_055
HL_85367.2
HL_1K8A_0561/A/2298:2310No text annotation
homologous
HL_4V9F_056
HL_91939.2
HL_1K8A_0581/A/2358:2365Pseudoknot geometry
homologous
HL_4V9F_058
HL_93324.4
HL_1K8A_0591/A/2389:2399No text annotation
homologous
HL_4V9F_059
HL_91939.2
HL_1K8A_0601/A/2411:2416GNRA
homologous
HL_4V9F_060
HL_37824.7
HL_1K8A_0611/A/2442:2450Pseudoknot geometry
homologous
HL_4V9F_061
HL_93324.4
HL_1K8A_0621/A/2506:2514No text annotation
homologous
HL_4V9F_062
HL_32735.2
HL_1K8A_0631/A/2563:2570No text annotation
homologous
HL_4V9F_063
HL_31585.3
HL_1K8A_0741/A/2586:2592No text annotation
homologous
HL_4V9F_073
HL_30068.2
HL_1K8A_0651/A/2629:2634GNRA
homologous
HL_4V9F_065
HL_37824.7
HL_1K8A_0661/A/2695:2700GNRA
geometric
HL_4V9F_066
HL_37824.7
HL_1K8A_0671/A/2737:2742Ribsomal LSU H95
homologous
HL_4V9F_067
HL_65794.5
HL_1K8A_0681/A/2780:2794No text annotation
homologous
HL_4V9F_068
HL_74055.2
HL_1K8A_0691/A/2836:2844No text annotation
homologous
HL_4V9F_069
HL_64690.6
HL_1K8A_0701/A/2876:2881GNRA
homologous
HL_4V9F_070
HL_37824.7
HL_1K8A_0751/B/3033:3047No text annotation
homologous
HL_4V9F_074
HL_97756.2
HL_1K8A_0711/B/3037:3043No text annotation
homologous
HL_4V9F_071
HL_47787.2
HL_1K8A_0721/B/3089:3094GNRA
homologous
HL_4V9F_072
HL_37824.7

Problematic loops

#loop idProblemSequence
HL_1K8A_004Mini UNCG related
HL_1K8A_021Mini UNCG
HL_1K8A_027No text annotation
HL_1K8A_030No text annotation
HL_1K8A_073No text annotation
HL_1K8A_038No text annotation
HL_1K8A_050No text annotation
HL_1K8A_053No text annotation
HL_1K8A_057No text annotation
HL_1K8A_064tRNA D-loop

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
IL_1K8A_0011/A/21:27,
1/A/516:522		Triple sheared with non-canonical cWW
homologous
IL_4V9F_001
IL_04021.2
IL_1K8A_0021/A/33:34,
1/A/448:450		Single bulged A
homologous
IL_4V9F_002
IL_31462.5
IL_1K8A_0031/A/39:41,
1/A/440:443		Major groove platform with extra cWW
homologous
IL_4V9F_003
IL_51387.2
IL_1K8A_0041/A/77:81,
1/A/93:100		Kink-turn
homologous
IL_4V9F_004
IL_01488.3
IL_1K8A_0051/A/153:154,
1/A/182:184		Single stack bend
homologous
IL_4V9F_005
IL_90729.1
IL_1K8A_0061/A/158:164,
1/A/171:178		8x7 Sarcin-Ricin; G-bulge
homologous
IL_4V9F_006
IL_04346.10
IL_1K8A_0071/A/210:216,
1/A/224:229		7x6 Sarcin-Ricin; G-bulge
homologous
IL_4V9F_007
IL_26307.2
IL_1K8A_0081/A/245:248,
1/A/265:266		Major groove platform; stack outside cWW
homologous
IL_4V9F_008
IL_50694.7
IL_1K8A_1051/A/245:249,
1/A/260:266		Kink-turn with embedded cWW pair
homologous
IL_4V9F_108
IL_33886.1
IL_1K8A_0091/A/248:249,
1/A/260:265		No text annotation
geometric
IL_4V9F_009
IL_92634.2
IL_1K8A_0101/A/274:275,
1/A/374:376		Single bulged G
homologous
IL_4V9F_010
IL_00225.13
IL_1K8A_0121/A/287:290,
1/A/362:365		Tandem non-canonical cWW pairs
geometric
IL_6CZR_168
NA
IL_1K8A_0131/A/290:296,
1/A/355:362		8x7 Sarcin-Ricin with CC bifurcated pair; G-bulge
homologous
IL_4V9F_012
IL_59724.1
IL_1K8A_0141/A/307:309,
1/A/322:323		Single bulged U
homologous
IL_4V9F_013
IL_89505.4
IL_1K8A_0151/A/487:491,
1/A/501:515		No text annotation
geometric
IL_4V9F_014
IL_31504.1
IL_1K8A_0161/A/548:553,
1/A/606:608		No text annotation
homologous
IL_4V9F_015
IL_59302.1
IL_1K8A_0171/A/554:555,
1/A/602:605		No text annotation
homologous
IL_4V9F_016
IL_47074.2
IL_1K8A_0181/A/558:561,
1/A/596:599		Tandem non-canonical cWW pairs
geometric
IL_1JID_002
IL_85033.2
IL_1K8A_0191/A/562:567,
1/A/591:595		Triple sheared related
homologous
IL_4V9F_018
IL_97631.1
IL_1K8A_0201/A/567:572,
1/A/585:591		7x6 Sarcin-Ricin; G-bulge
geometric
IL_4V9F_019
IL_16458.4
IL_1K8A_0211/A/663:667,
1/A/679:683		AAA cross-strand stack
homologous
IL_4V9F_020
IL_66798.2
IL_1K8A_0221/A/699:702,
1/A/726:727		Multiple bulged bases
homologous
IL_4V9F_021
IL_82107.4
IL_1K8A_0231/A/705:709,
1/A/719:723		tSH-tHW-tHS
homologous
IL_4V9F_022
IL_17136.7
IL_1K8A_0241/A/763:765,
1/A/899:901		Isolated non-canonical cWW pair
homologous
IL_4V9F_023
IL_87907.2
IL_1K8A_0251/A/765:769,
1/A/892:899		tHW-tHW cross-strand stack
geometric
IL_4V9F_024
IL_54041.2
IL_1K8A_0261/A/788:789,
1/A/856:858		Single bulged A
geometric
IL_4V9F_025
IL_31462.5
IL_1K8A_0271/A/793:794,
1/A/819:821		Single bulged G
homologous
IL_4V9F_026
IL_00225.13
IL_1K8A_0281/A/794:798,
1/A/815:819		Triple sheared
geometric
IL_4V9F_027
IL_50730.2
IL_1K8A_0291/A/830:833,
1/A/849:851		Major groove platform with extra cWW
homologous
IL_4V9F_028
IL_51387.2
IL_1K8A_0301/A/834:836,
1/A/847:848		Single bulged U
homologous
IL_4V9F_029
IL_89505.4
IL_1K8A_0311/A/868:870,
1/A/880:884		Multiple bulged bases
homologous
IL_4V9F_030
IL_57881.1
IL_1K8A_0321/A/936:940,
1/A/1026:1034		Kink-turn
homologous
IL_4V9F_031
IL_94910.1
IL_1K8A_0331/A/942:944,
1/A/1023:1024		Single bulged A
homologous
IL_4V9F_032
IL_31462.5
IL_1K8A_0341/A/952:956,
1/A/1011:1015		5x5 Sarcin-Ricin with intercalated A; G-bulge
geometric
IL_4V9F_033
IL_38862.4
IL_1K8A_0351/A/956:957,
1/A/1009:1011		Minor groove platform
homologous
IL_4V9F_034
IL_51454.2
IL_1K8A_0361/A/958:964,
1/A/1004:1008		No text annotation
homologous
IL_4V9F_035
IL_06691.1
IL_1K8A_0371/A/965:968,
1/A/1000:1003		No text annotation
homologous
IL_4V9F_036
IL_02203.1
IL_1K8A_0381/A/1095:1099,
1/A/1257:1261		UAA/GAN
homologous
IL_4V9F_037
IL_38507.2
IL_1K8A_0391/A/1101:1108,
1/A/1254:1255		SSU/LSU pseudoknot
homologous
IL_4V9F_038
IL_41203.4
IL_1K8A_0401/A/1108:1110,
1/A/1253:1254		Single bulged U
geometric
IL_4V9F_039
IL_89505.4
IL_1K8A_0411/A/1115:1121,
1/A/1243:1248		Kink-turn related
homologous
IL_4V9F_040
IL_57188.5
IL_1K8A_1061/A/1122:1134,
1/A/1228:1242		No text annotation
homologous
IL_4V9F_109
IL_29826.1
IL_1K8A_0421/A/1136:1138,
1/A/1225:1226		Single bulged G
homologous
IL_4V9F_041
IL_00225.13
IL_1K8A_0431/A/1147:1155,
1/A/1212:1216		Kink-turn
homologous
IL_4V9F_042
IL_99692.2
IL_1K8A_0451/A/1269:1270,
1/A/1286:1289		Bulged stacked bases
homologous
IL_4V9F_045
IL_76709.2
IL_1K8A_0461/A/1301:1303,
1/A/1351:1354		Isolated cWS basepair
homologous
IL_4V9F_046
IL_42997.3
IL_1K8A_0471/A/1303:1305,
1/A/1349:1351		Isolated non-canonical cWW pair
geometric
IL_4V9F_047
IL_28037.2
IL_1K8A_0481/A/1312:1319,
1/A/1338:1342		Kink-turn
homologous
IL_4V9F_048
IL_70923.9
IL_1K8A_0491/A/1367:1373,
1/A/2052:2057		7x6 Sarcin-Ricin; G-bulge
homologous
IL_4V9F_049
IL_26307.2
IL_1K8A_0501/A/1416:1419,
1/A/1678:1679		Major groove platform; stack outside cWW
homologous
IL_4V9F_050
IL_50694.7
IL_1K8A_0511/A/1425:1429,
1/A/1437:1439		C-loop
homologous
IL_4V9F_051
IL_63596.11
IL_1K8A_0521/A/1456:1460,
1/A/1483:1489		UAA/GAN
homologous
IL_4V9F_052
IL_70627.3
IL_1K8A_0531/A/1465:1467,
1/A/1475:1478		No text annotation
homologous
IL_4V9F_053
IL_09990.4
IL_1K8A_0541/A/1521:1529,
1/A/1662:1665		No text annotation
homologous
IL_4V9F_054
IL_41853.1
IL_1K8A_0551/A/1542:1546,
1/A/1639:1643		tSH-tHW-tHS
homologous
IL_4V9F_055
IL_17136.7
IL_1K8A_0561/A/1570:1574,
1/A/1622:1627		tSH-tHH-tHS
homologous
IL_4V9F_056
IL_62654.1
IL_1K8A_0571/A/1578:1583,
1/A/1612:1618		No text annotation
homologous
IL_4V9F_057
IL_34822.1
IL_1K8A_0581/A/1587:1592,
1/A/1602:1608		Kink-turn
homologous
IL_4V9F_058
IL_32016.1
IL_1K8A_0591/A/1728:1734,
1/A/2045:2047		No text annotation
homologous
IL_4V9F_059
IL_12566.4
IL_1K8A_0601/A/1741:1743,
1/A/2036:2038		Isolated tWW turn
homologous
IL_4V9F_060
IL_67095.2
IL_1K8A_0611/A/1744:1747,
1/A/2034:2035		Major groove platform; stack outside cWW
homologous
IL_4V9F_061
IL_50694.7
IL_1K8A_1081/A/1744:1752,
1/A/2031:2035		No text annotation
homologous
IL_4V9F_111
IL_22854.4
IL_1K8A_0621/A/1747:1752,
1/A/2031:2034		Intercalated tWH
geometric
IL_4V9F_062
IL_76758.2
IL_1K8A_0631/A/1764:1769,
1/A/1774:1780		tSH-tSH-tHH-tHS
geometric
IL_4V9F_063
IL_47346.2
IL_1K8A_0641/A/1826:1827,
1/A/2021:2023		Single bulged A
homologous
IL_4V9F_064
IL_31462.5
IL_1K8A_0651/A/1854:1860,
1/A/1869:1877		Kink-turn related
homologous
IL_4V9F_065
IL_17069.5
IL_1K8A_0661/A/1893:1896,
1/A/1943:1944		Minor groove platform, major groove intercalation
homologous
IL_4V9F_066
IL_95583.2
IL_1K8A_0671/A/1897:1898,
1/A/1939:1942		Major groove intercalation
homologous
IL_4V9F_067
IL_82107.4
IL_1K8A_0681/A/1902:1905,
1/A/1934:1935		Major groove minor groove platform; mini C-loop
homologous
IL_4V9F_068
IL_68140.4
IL_1K8A_0691/A/1907:1913,
1/A/1926:1932		No text annotation
homologous
IL_4V9F_069
IL_88116.2
IL_1K8A_0701/A/1974:1975,
1/A/2005:2008		Bulged stacked bases
geometric
IL_4V9F_070
IL_22551.3
IL_1K8A_0711/A/1975:1986,
1/A/2002:2005		No text annotation
homologous
IL_4V9F_071
IL_04332.3
IL_1K8A_0721/A/2090:2093,
1/A/2652:2654		No text annotation
homologous
IL_4V9F_072
IL_55516.2
IL_1K8A_0731/A/2095:2097,
1/A/2647:2650		No text annotation
homologous
IL_4V9F_073
IL_83389.2
IL_1K8A_0741/A/2108:2110,
1/A/2477:2478		Single bulged U
homologous
IL_4V9F_074
IL_89505.4
IL_1K8A_0751/A/2111:2112,
1/A/2473:2476		Minor groove platform
homologous
IL_4V9F_075
IL_51454.2
IL_1K8A_0761/A/2122:2124,
1/A/2269:2272		Isolated tHS basepair with bulges
homologous
IL_4V9F_076
IL_85599.2
IL_1K8A_0771/A/2279:2280,
1/A/2290:2292		Single bulged A
homologous
IL_4V9F_079
IL_31462.5
IL_1K8A_0781/A/2331:2333,
1/A/2351:2355		Isolated tHS basepair with bulges
geometric
IL_4V9F_080
IL_61476.2
IL_1K8A_0791/A/2436:2438,
1/A/2454:2455		Single stack bend
homologous
IL_4V9F_081
IL_26793.1
IL_1K8A_0801/A/2489:2490,
1/A/2531:2533		Major groove platform
homologous
IL_4V9F_082
IL_48076.6
IL_1K8A_0811/A/2492:2494,
1/A/2528:2529		Major groove platform
geometric
IL_4V9F_083
IL_07039.3
IL_1K8A_0821/A/2494:2496,
1/A/2524:2528		Major groove minor groove platform with extra cWW
homologous
IL_4V9F_084
IL_51387.2
IL_1K8A_0831/A/2501:2505,
1/A/2515:2519		Triple sheared
homologous
IL_4V9F_085
IL_17948.2
IL_1K8A_0841/A/2542:2543,
1/A/2615:2617		Major groove platform
homologous
IL_4V9F_086
IL_07039.3
IL_1K8A_0851/A/2545:2547,
1/A/2609:2613		Isolated non-canonical cWW pair
geometric
IL_4V9F_087
IL_07785.1
IL_1K8A_0861/A/2547:2548,
1/A/2606:2609		Multiple bulged bases
homologous
IL_4V9F_088
IL_42626.2
IL_1K8A_0871/A/2557:2558,
1/A/2575:2578		Major groove platform with intercalation
homologous
IL_4V9F_089
IL_02555.1
IL_1K8A_0881/A/2626:2627,
1/A/2636:2638		Single bulged A
geometric
IL_4V88_409
NA
IL_1K8A_0891/A/2672:2676,
1/A/2809:2817		tSH-tHS-tHW
geometric
IL_5J7L_345
IL_04638.3
IL_1K8A_0901/A/2689:2695,
1/A/2700:2705		Sarcin-Ricin target in LSU H95; G-bulge
homologous
IL_4V9F_092
IL_26307.2
IL_1K8A_0911/A/2717:2721,
1/A/2761:2763		C-loop
homologous
IL_4V9F_093
IL_63596.11
IL_1K8A_0921/A/2724:2728,
1/A/2754:2758		UAA/GAN
homologous
IL_4V9F_094
IL_23774.1
IL_1K8A_0931/A/2732:2733,
1/A/2746:2750		Bulged stacked bases
homologous
IL_4V9F_095
IL_07171.1
IL_1K8A_0941/A/2772:2777,
1/A/2797:2802		UAA/GAN with extra cWW
homologous
IL_4V9F_096
IL_49767.8
IL_1K8A_0951/A/2855:2857,
1/A/2900:2903		Isolated non-canonical cWW with bulges
homologous
IL_4V9F_097
IL_07785.1
IL_1K8A_0961/A/2860:2861,
1/A/2895:2897		Single bulged A
homologous
IL_4V9F_098
IL_31462.5
IL_1K8A_0971/A/2864:2869,
1/A/2888:2892		tHS double platform
homologous
IL_4V9F_099
IL_70411.2
IL_1K8A_0981/A/2873:2876,
1/A/2881:2884		Double sheared
geometric
IL_4V9F_100
IL_09705.15
IL_1K8A_0991/B/3015:3016,
1/B/3064:3066		Major groove intercalation
homologous
IL_4V9F_101
IL_31462.5
IL_1K8A_1001/B/3021:3028,
1/B/3054:3059		Minor groove platform related
homologous
IL_4V9F_102
IL_67623.1
IL_1K8A_1011/B/3029:3030,
1/B/3050:3053		Major groove minor groove platform; mini C-loop
homologous
IL_4V9F_103
IL_68140.4
IL_1K8A_1021/B/3033:3037,
1/B/3043:3047		Symmetric double minor groove platform
geometric
IL_4V9F_104
IL_58103.11
IL_1K8A_1031/B/3075:3081,
1/B/3101:3106		7x6 Sarcin-Ricin; G-bulge
homologous
IL_4V9F_106
IL_26307.2
IL_1K8A_1041/B/3086:3088,
1/B/3095:3096		Single bulged U
homologous
IL_4V9F_107
IL_89505.4

Problematic loops

#loop idProblemSequence
IL_1K8A_011No text annotation
IL_1K8A_107No text annotation
IL_1K8A_044No text annotation

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
J3_1K8A_0111/A/27:28,
1/A/480:487,
1/A/515:516		No text annotation
geometric
J3_4V9F_011
J3_60031.2
J3_1K8A_0121/A/27:28,
1/A/480:491,
1/A/501:516		No text annotation
homologous
J3_4V9F_012
J3_24879.1
J3_1K8A_0131/A/29:32,
1/A/451:467,
1/A/474:479		No text annotation
homologous
J3_4V9F_013
J3_30040.2
J3_1K8A_0141/A/52:53,
1/A/66:72,
1/A/105:109		No text annotation
homologous
J3_4V9F_014
J3_35667.2
J3_1K8A_0011/A/240:244,
1/A/267:273,
1/A/377:379		No text annotation
homologous
J3_4V9F_001
J3_06335.1
J3_1K8A_0151/A/302:307,
1/A/323:332,
1/A/344:349		No text annotation
homologous
J3_4V9F_015
J3_59706.1
J3_1K8A_0021/A/774:780,
1/A/866:868,
1/A/884:887		No text annotation
homologous
J3_4V9F_002
J3_64189.2
J3_1K8A_0031/A/789:791,
1/A/823:828,
1/A/853:856		No text annotation
homologous
J3_4V9F_003
J3_44724.7
J3_1K8A_0041/A/1159:1161,
1/A/1185:1194,
1/A/1205:1208		No text annotation
J3_1K8A_0051/A/1404:1409,
1/A/1700:1703,
1/A/1715:1718		No text annotation
homologous
J3_4V9F_005
J3_32852.6
J3_1K8A_0061/A/1412:1415,
1/A/1680:1686,
1/A/1695:1697		No text annotation
homologous
J3_4V9F_006
J3_19545.2
J3_1K8A_0161/A/1450:1455,
1/A/1490:1494,
1/A/1511:1512		No text annotation
homologous
J3_4V9F_016
J3_31965.2
J3_1K8A_0171/A/1531:1535,
1/A/1650:1651,
1/A/1655:1660		No text annotation
homologous
J3_4V9F_017
J3_12393.2
J3_1K8A_0071/A/2131:2134,
1/A/2241:2245,
1/A/2256:2262		No text annotation
homologous
J3_4V9F_007
J3_97609.1
J3_1K8A_0181/A/2316:2318,
1/A/2421:2432,
1/A/2459:2464		No text annotation
homologous
J3_4V9F_018
J3_44792.1
J3_1K8A_0081/A/2329:2331,
1/A/2355:2357,
1/A/2366:2371		No text annotation
homologous
J3_4V9F_008
J3_61124.2
J3_1K8A_0091/A/2552:2555,
1/A/2580:2583,
1/A/2595:2602		No text annotation
homologous
J3_4V9F_009
J3_69441.1
J3_1K8A_0191/A/2831:2832,
1/A/2848:2853,
1/A/2905:2909		No text annotation
homologous
J3_4V9F_019
J3_76911.2
J3_1K8A_0101/B/3009:3014,
1/B/3067:3071,
1/B/3110:3114		5S rRNA
homologous
J3_4V9F_010
J3_89737.1
J4_1K8A_0011/A/239:240,
1/A/379:384,
1/A/405:412,
1/A/428:431		No text annotation
homologous
J4_4V9F_001
J4_45801.6
J4_1K8A_0021/A/302:307,
1/A/323:326,
1/A/330:332,
1/A/344:349		No text annotation
homologous
J4_4V9F_002
J4_11418.1
J4_1K8A_0031/A/1374:1382,
1/A/1400:1401,
1/A/1721:1725,
1/A/2050:2051		No text annotation
homologous
J4_4V9F_003
J4_89787.1
J4_1K8A_0041/A/1416:1420,
1/A/1444:1449,
1/A/1513:1514,
1/A/1672:1679		No text annotation
homologous
J4_4V9F_004
J4_69051.6
J4_1K8A_0051/A/1419:1420,
1/A/1444:1449,
1/A/1513:1514,
1/A/1672:1678		No text annotation
homologous
J4_4V9F_005
J4_10313.5
J4_1K8A_0061/A/1551:1552,
1/A/1569:1570,
1/A/1627:1628,
1/A/1633:1634		No text annotation
homologous
J4_4V9F_006
J4_24280.2
J4_1K8A_0071/A/1828:1832,
1/A/1844:1848,
1/A/1883:1887,
1/A/2015:2020		No text annotation
homologous
J4_4V9F_007
J4_07509.2
J4_1K8A_0081/A/1889:1891,
1/A/1946:1947,
1/A/1965:1974,
1/A/2008:2013		No text annotation
homologous
J4_4V9F_008
J4_93343.1
J4_1K8A_0091/A/2319:2323,
1/A/2377:2381,
1/A/2407:2409,
1/A/2418:2420		No text annotation
homologous
J4_4V9F_009
J4_04930.6
J4_1K8A_0101/A/2679:2682,
1/A/2712:2713,
1/A/2767:2770,
1/A/2804:2806		No text annotation
homologous
J4_4V9F_010
J4_28473.1
J5_1K8A_0011/A/43:50,
1/A/111:116,
1/A/124:125,
1/A/129:132,
1/A/146:148		No text annotation
homologous
J5_4V9F_001
J5_99180.1
J5_1K8A_0021/A/537:539,
1/A/617:621,
1/A/634:636,
1/A/1365:1366,
1/A/2058:2059		No text annotation
homologous
J5_4V9F_002
J5_43153.5
J5_1K8A_0031/A/641:646,
1/A/759:762,
1/A/902:905,
1/A/1300:1301,
1/A/1354:1360		No text annotation
homologous
J5_4V9F_003
J5_56920.1
J5_1K8A_0041/A/658:661,
1/A/685:689,
1/A/696:699,
1/A/727:728,
1/A/743:747		No text annotation
homologous
J5_4V9F_004
J5_87582.1
J5_1K8A_0051/A/658:661,
1/A/685:689,
1/A/696:702,
1/A/726:728,
1/A/743:747		No text annotation
homologous
J5_4V9F_005
J5_26867.1
J5_1K8A_0061/A/1752:1760,
1/A/1784:1785,
1/A/1807:1808,
1/A/1812:1820,
1/A/2029:2031		No text annotation
homologous
J5_4V9F_006
J5_62523.6
J5_1K8A_0091/A/2098:2105,
1/A/2481:2489,
1/A/2533:2541,
1/A/2618:2623,
1/A/2641:2646		No text annotation
J5_1K8A_0081/A/2115:2118,
1/A/2276:2279,
1/A/2292:2293,
1/A/2315:2316,
1/A/2464:2470		No text annotation
homologous
J5_4V9F_008
J5_08912.1
J6_1K8A_0011/A/41:42,
1/A/149:153,
1/A/184:194,
1/A/202:206,
1/A/233:237,
1/A/433:440		No text annotation
J6_1K8A_0021/A/2115:2118,
1/A/2276:2279,
1/A/2292:2293,
1/A/2315:2318,
1/A/2421:2432,
1/A/2459:2470		No text annotation
J7_1K8A_0011/A/910:915,
1/A/928:931,
1/A/1039:1045,
1/A/1069:1074,
1/A/1085:1089,
1/A/1267:1268,
1/A/1290:1295		No text annotation

Problematic loops

#loop idProblemSequence
J5_1K8A_007No text annotation

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