2O44 Internal, Hairpin and 3-way Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_2O44_001 | 1/A/58:67 | No text annotation Not in a motif group | homologous HL_7A0S_001 HL_99167.1 | |
| HL_2O44_002 | 1/A/84:96 | No text annotation Not in a motif group | ||
| HL_2O44_003 | 1/A/121:126 | No text annotation Not in a motif group | homologous HL_4WF9_003 HL_75407.1 | |
| HL_2O44_004 | 1/A/133:138 | No text annotation Not in a motif group | geometric HL_4WF9_003 HL_75407.1 | |
| HL_2O44_005 | 1/A/146:151 | No text annotation Not in a motif group | geometric HL_361D_002 HL_90617.2 | |
| HL_2O44_006 | 1/A/165:185 | No text annotation Not in a motif group | ||
| HL_2O44_007 | 1/A/201:208 | No text annotation Not in a motif group | ||
| HL_2O44_008 | 1/A/223:229 | No text annotation Not in a motif group | homologous HL_5J7L_141 HL_67216.7 | |
| HL_2O44_009 | 1/A/316:323 | No text annotation Not in a motif group | homologous HL_7RQB_010 HL_89380.2 | |
| HL_2O44_010 | 1/A/330:334 | No text annotation Not in a motif group | homologous HL_5J7L_143 HL_75407.1 | |
| HL_2O44_011 | 1/A/338:346 | No text annotation Not in a motif group | homologous HL_5J7L_144 HL_08002.8 | |
| HL_2O44_012 | 1/A/394:406 | No text annotation Not in a motif group | ||
| HL_2O44_013 | 1/A/423:430 | No text annotation Not in a motif group | homologous HL_7RQB_014 HL_96598.1 | |
| HL_2O44_014 | 1/A/473:478 | GNRA Not in a motif group | homologous HL_4WF9_015 HL_42097.1 | |
| HL_2O44_015 | 1/A/498:503 | No text annotation Not in a motif group | homologous HL_7A0S_016 HL_42097.1 | |
| HL_2O44_016 | 1/A/551:561 | No text annotation Not in a motif group | geometric HL_2ZZM_002 HL_23083.1 | |
| HL_2O44_017 | 1/A/615:633 | No text annotation Not in a motif group | ||
| HL_2O44_018 | 1/A/640:645 | No text annotation Not in a motif group | homologous HL_7RQB_020 HL_42097.1 | |
| HL_2O44_019 | 1/A/651:658 | No text annotation Not in a motif group | homologous HL_7A0S_021 HL_01226.1 | |
| HL_2O44_020 | 1/A/724:733 | No text annotation Not in a motif group | geometric HL_5NFV_001 HL_76539.2 | |
| HL_2O44_021 | 1/A/757:766 | No text annotation Not in a motif group | homologous HL_4WF9_023 HL_39334.6 | |
| HL_2O44_022 | 1/A/792:798 | No text annotation Not in a motif group | homologous HL_7A0S_023 HL_27930.1 | |
| HL_2O44_023 | 1/A/839:844 | No text annotation Not in a motif group | homologous HL_7A0S_024 HL_64365.1 | |
| HL_2O44_025 | 1/A/966:973 | GNRA Not in a motif group | homologous HL_4WF9_027 HL_42097.1 | |
| HL_2O44_026 | 1/A/989:996 | No text annotation Not in a motif group | homologous HL_7A0S_027 HL_64430.2 | |
| HL_2O44_027 | 1/A/1074:1086 | No text annotation Not in a motif group | ||
| HL_2O44_028 | 1/A/1103:1110 | No text annotation Not in a motif group | homologous HL_7RQB_030 NA | |
| HL_2O44_029 | 1/A/1185:1189 | No text annotation Not in a motif group | ||
| HL_2O44_030 | 1/A/1235:1240 | No text annotation Not in a motif group | homologous HL_7A0S_031 HL_87030.2 | |
| HL_2O44_031 | 1/A/1294:1302 | T-loop with 2 stacked bulged bases Not in a motif group | homologous HL_4WF9_032 HL_89380.2 | |
| HL_2O44_032 | 1/A/1337:1343 | No text annotation Not in a motif group | geometric HL_7A0S_033 HL_46680.1 | |
| HL_2O44_033 | 1/A/1376:1381 | No text annotation Not in a motif group | homologous HL_7A0S_034 HL_16173.1 | |
| HL_2O44_034 | 1/A/1399:1414 | No text annotation Not in a motif group | ||
| HL_2O44_035 | 1/A/1466:1476 | No text annotation Not in a motif group | homologous HL_7A0S_036 HL_83808.1 | |
| HL_2O44_036 | 1/A/1508:1514 | No text annotation Not in a motif group | homologous HL_7A0S_037 HL_46680.1 | |
| HL_2O44_037 | 1/A/1581:1584 | No text annotation Not in a motif group | homologous HL_5J7L_172 HL_38927.2 | |
| HL_2O44_038 | 1/A/1628:1635 | No text annotation Not in a motif group | homologous HL_4WF9_038 HL_64430.2 | |
| HL_2O44_039 | 1/A/1647:1652 | No text annotation Not in a motif group | homologous HL_7RQB_041 HL_01057.1 | |
| HL_2O44_040 | 1/A/1708:1713 | Other HL Not in a motif group | geometric HL_1P6V_001 HL_03562.2 | |
| HL_2O44_041 | 1/A/1731:1735 | No text annotation Not in a motif group | ||
| HL_2O44_042 | 1/A/1743:1747 | No text annotation Not in a motif group | homologous HL_7A0S_044 HL_76539.2 | |
| HL_2O44_043 | 1/A/1767:1779 | No text annotation Not in a motif group | homologous HL_7A0S_045 HL_43667.1 | |
| HL_2O44_044 | 1/A/1797:1803 | No text annotation Not in a motif group | geometric HL_7A0S_046 HL_53845.1 | |
| HL_2O44_045 | 1/A/1856:1861 | No text annotation Not in a motif group | homologous HL_7A0S_047 HL_42097.1 | |
| HL_2O44_046 | 1/A/1893:1903 | No text annotation Not in a motif group | ||
| HL_2O44_047 | 1/A/1932:1940 | No text annotation Not in a motif group | homologous HL_7RQB_049 HL_51824.1 | |
| HL_2O44_048 | 1/A/1975:1979 | No text annotation Not in a motif group | ||
| HL_2O44_049 | 1/A/2010:2019 | No text annotation Not in a motif group | homologous HL_7A0S_049 HL_90642.6 | |
| HL_2O44_051 | 1/A/2188:2196 | No text annotation Not in a motif group | ||
| HL_2O44_052 | 1/A/2227:2235 | No text annotation Not in a motif group | homologous HL_7A0S_052 HL_53171.2 | |
| HL_2O44_053 | 1/A/2243:2255 | No text annotation Not in a motif group | homologous HL_7A0S_053 HL_19870.6 | |
| HL_2O44_054 | 1/A/2283:2291 | No text annotation Not in a motif group | ||
| HL_2O44_055 | 1/A/2303:2310 | No text annotation Not in a motif group | homologous HL_5J7L_189 HL_12078.2 | |
| HL_2O44_056 | 1/A/2334:2341 | No text annotation Not in a motif group | homologous HL_7A0S_056 HL_84085.2 | |
| HL_2O44_057 | 1/A/2353:2358 | GNRA Not in a motif group | homologous HL_4WF9_054 HL_42097.1 | |
| HL_2O44_058 | 1/A/2383:2392 | No text annotation Not in a motif group | homologous HL_7A0S_058 HL_30784.2 | |
| HL_2O44_059 | 1/A/2450:2458 | No text annotation Not in a motif group | homologous HL_4WF9_056 HL_06192.2 | |
| HL_2O44_060 | 1/A/2507:2514 | No text annotation Not in a motif group | homologous HL_7A0S_060 HL_88526.2 | |
| HL_2O44_061 | 1/A/2530:2536 | No text annotation Not in a motif group | homologous HL_7A0S_061 HL_43656.2 | |
| HL_2O44_062 | 1/A/2573:2578 | No text annotation Not in a motif group | homologous HL_7A0S_062 HL_42097.1 | |
| HL_2O44_063 | 1/A/2637:2642 | No text annotation Not in a motif group | homologous HL_7RQB_064 HL_42097.1 | |
| HL_2O44_064 | 1/A/2680:2685 | Ribsomal LSU H95 Not in a motif group | homologous HL_7A0S_064 HL_46680.1 | |
| HL_2O44_065 | 1/A/2725:2739 | No text annotation Not in a motif group | homologous HL_7RQB_066 HL_56677.7 | |
| HL_2O44_066 | 1/A/2794:2802 | No text annotation Not in a motif group | homologous HL_5J7L_201 HL_27930.1 | |
| HL_2O44_067 | 1/A/2830:2837 | No text annotation Not in a motif group | geometric HL_4WF9_041 HL_49288.1 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_2O44_024 | No text annotation | ||
| HL_2O44_068 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_2O44_001 | 1/A/24:30, 1/A/520:526 | Triple sheared with non-canonical cWW Not in a motif group | homologous IL_4WF9_001 IL_66414.6 | |
| IL_2O44_002 | 1/A/36:37, 1/A/454:456 | No text annotation Not in a motif group | ||
| IL_2O44_003 | 1/A/37:39, 1/A/452:454 | No text annotation Not in a motif group | geometric IL_3LA5_001 IL_95997.1 | |
| IL_2O44_004 | 1/A/41:44, 1/A/446:450 | No text annotation Not in a motif group | ||
| IL_2O44_005 | 1/A/79:84, 1/A/96:104 | Kink-turn Not in a motif group | geometric IL_4LFB_031 IL_37722.1 | |
| IL_2O44_006 | 1/A/160:161, 1/A/189:191 | Single stack bend Not in a motif group | homologous IL_4WF9_007 IL_76488.2 | |
| IL_2O44_007 | 1/A/215:222, 1/A/230:236 | 8x7 Sarcin-Ricin; G-bulge Not in a motif group | homologous IL_7A0S_007 IL_04346.7 | |
| IL_2O44_009 | 1/A/298:306, 1/A/354:364 | No text annotation Not in a motif group | ||
| IL_2O44_010 | 1/A/392:394, 1/A/406:408 | No text annotation Not in a motif group | geometric IL_5TBW_110 IL_51629.2 | |
| IL_2O44_011 | 1/A/492:495, 1/A/506:519 | No text annotation Not in a motif group | homologous IL_7A0S_009 IL_60992.6 | |
| IL_2O44_012 | 1/A/545:548, 1/A/564:567 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_4K27_001 IL_30621.2 | |
| IL_2O44_013 | 1/A/598:602, 1/A/678:681 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_1L9A_005 IL_30621.2 | |
| IL_2O44_014 | 1/A/685:687, 1/A/819:821 | No text annotation Not in a motif group | geometric IL_4WF9_020 IL_95997.1 | |
| IL_2O44_015 | 1/A/687:691, 1/A/812:819 | No text annotation Not in a motif group | homologous IL_7A0S_015 IL_17470.6 | |
| IL_2O44_016 | 1/A/715:716, 1/A/741:743 | Single bulged G Not in a motif group | geometric IL_5J7L_262 IL_00225.2 | |
| IL_2O44_017 | 1/A/716:721, 1/A/736:741 | Triple sheared with non-canonical cWW Not in a motif group | homologous IL_7A0S_018 IL_86929.2 | |
| IL_2O44_018 | 1/A/751:754, 1/A/769:771 | Major groove platform with extra cWW Not in a motif group | geometric IL_7RQB_022 IL_05564.2 | |
| IL_2O44_019 | 1/A/754:756, 1/A/767:769 | No text annotation Not in a motif group | homologous IL_7A0S_020 IL_95997.1 | |
| IL_2O44_022 | 1/A/850:851, 1/A/951:953 | Single stack bend Not in a motif group | homologous IL_4WF9_028 IL_92001.1 | |
| IL_2O44_023 | 1/A/857:862, 1/A/941:945 | No text annotation Not in a motif group | ||
| IL_2O44_024 | 1/A/863:864, 1/A/938:940 | Single stack bend Not in a motif group | homologous IL_5J7L_269 IL_76488.2 | |
| IL_2O44_025 | 1/A/864:866, 1/A/936:938 | No text annotation Not in a motif group | geometric IL_7A0S_026 IL_51629.2 | |
| IL_2O44_026 | 1/A/868:870, 1/A/932:934 | No text annotation Not in a motif group | geometric IL_7RQB_034 IL_95997.1 | |
| IL_2O44_027 | 1/A/870:875, 1/A/927:932 | No text annotation Not in a motif group | ||
| IL_2O44_028 | 1/A/875:876, 1/A/925:927 | Minor groove platform Not in a motif group | geometric IL_7A0S_028 IL_42622.2 | |
| IL_2O44_029 | 1/A/876:882, 1/A/920:925 | No text annotation Not in a motif group | ||
| IL_2O44_030 | 1/A/883:885, 1/A/917:919 | Isolated near basepair Not in a motif group | homologous IL_7A0S_030 IL_52767.2 | |
| IL_2O44_032 | 1/A/963:965, 1/A/974:976 | No text annotation Not in a motif group | homologous IL_7RQB_034 IL_95997.1 | |
| IL_2O44_033 | 1/A/1004:1007, 1/A/1170:1172 | Isolated cWS basepair Not in a motif group | geometric IL_5J7L_286 IL_52767.2 | |
| IL_2O44_034 | 1/A/1008:1013, 1/A/1164:1169 | UAA/GAN with extra cWW Not in a motif group | geometric IL_4WF9_104 IL_49767.5 | |
| IL_2O44_035 | 1/A/1014:1024, 1/A/1160:1163 | No text annotation Not in a motif group | ||
| IL_2O44_036 | 1/A/1027:1029, 1/A/1155:1157 | Not an internal loop Not in a motif group | geometric IL_5VCI_005 IL_82842.2 | |
| IL_2O44_037 | 1/A/1029:1035, 1/A/1150:1155 | No text annotation Not in a motif group | homologous IL_4WF9_039 IL_57188.3 | |
| IL_2O44_038 | 1/A/1042:1046, 1/A/1131:1134 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_4V88_431 IL_30621.2 | |
| IL_2O44_039 | 1/A/1070:1073, 1/A/1087:1090 | No text annotation Not in a motif group | ||
| IL_2O44_041 | 1/A/1210:1213, 1/A/1259:1263 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_3WBM_002 IL_30621.2 | |
| IL_2O44_043 | 1/A/1218:1220, 1/A/1252:1254 | Isolated cWH basepair Not in a motif group | geometric IL_6F4H_001 IL_51629.2 | |
| IL_2O44_044 | 1/A/1221:1228, 1/A/1247:1251 | Kink-turn Not in a motif group | homologous IL_7A0S_043 IL_70923.2 | |
| IL_2O44_045 | 1/A/1232:1234, 1/A/1241:1243 | Intercalated cWW Not in a motif group | homologous IL_7A0S_044 IL_82842.2 | |
| IL_2O44_046 | 1/A/1275:1282, 1/A/1994:2000 | 8x7 Sarcin-Ricin; G-bulge Not in a motif group | homologous IL_7RQB_049 IL_04346.7 | |
| IL_2O44_048 | 1/A/1332:1337, 1/A/1343:1346 | No text annotation Not in a motif group | ||
| IL_2O44_049 | 1/A/1364:1368, 1/A/1389:1393 | UAA/GAN Not in a motif group | homologous IL_4WF9_051 IL_89002.2 | |
| IL_2O44_050 | 1/A/1370:1374, 1/A/1383:1387 | tSH-tHW-tHS Not in a motif group | homologous IL_7A0S_049 IL_17136.1 | |
| IL_2O44_052 | 1/A/1426:1430, 1/A/1598:1605 | Kink-turn Not in a motif group | homologous IL_7A0S_050 IL_93699.1 | |
| IL_2O44_053 | 1/A/1431:1438, 1/A/1590:1597 | No text annotation Not in a motif group | ||
| IL_2O44_054 | 1/A/1447:1449, 1/A/1573:1576 | No text annotation Not in a motif group | homologous IL_7A0S_052 IL_55351.2 | |
| IL_2O44_055 | 1/A/1450:1454, 1/A/1567:1572 | No text annotation Not in a motif group | ||
| IL_2O44_056 | 1/A/1463:1465, 1/A/1477:1478 | Single stack bend Not in a motif group | homologous IL_7A0S_054 IL_76488.2 | |
| IL_2O44_057 | 1/A/1495:1499, 1/A/1521:1528 | No text annotation Not in a motif group | ||
| IL_2O44_058 | 1/A/1499:1502, 1/A/1518:1521 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_6CZR_168 IL_67743.1 | |
| IL_2O44_059 | 1/A/1502:1508, 1/A/1514:1518 | No text annotation Not in a motif group | ||
| IL_2O44_060 | 1/A/1668:1673, 1/A/1987:1989 | No text annotation Not in a motif group | homologous IL_7A0S_059 IL_12566.2 | |
| IL_2O44_061 | 1/A/1703:1708, 1/A/1713:1719 | tSH-tSH-tHH-tHS Not in a motif group | homologous IL_7RQB_068 IL_65969.2 | |
| IL_2O44_063 | 1/A/1760:1762, 1/A/1963:1966 | No text annotation Not in a motif group | geometric IL_4WF9_083 IL_95997.1 | |
| IL_2O44_064 | 1/A/1786:1788, 1/A/1814:1816 | No text annotation Not in a motif group | geometric IL_6IA2_001 IL_95997.1 | |
| IL_2O44_065 | 1/A/1789:1795, 1/A/1805:1813 | Kink-turn related Not in a motif group | homologous IL_7A0S_065 IL_17069.3 | |
| IL_2O44_067 | 1/A/1829:1832, 1/A/1885:1886 | No text annotation Not in a motif group | homologous IL_4WF9_070 NA | |
| IL_2O44_068 | 1/A/1833:1834, 1/A/1881:1884 | Major groove outside cWW, minor groove, intercalation pocket Not in a motif group | homologous IL_5J7L_315 IL_16396.2 | |
| IL_2O44_069 | 1/A/1837:1841, 1/A/1876:1878 | No text annotation Not in a motif group | ||
| IL_2O44_070 | 1/A/1842:1847, 1/A/1870:1875 | No text annotation Not in a motif group | ||
| IL_2O44_071 | 1/A/1848:1853, 1/A/1864:1869 | No text annotation Not in a motif group | ||
| IL_2O44_072 | 1/A/1916:1917, 1/A/1947:1950 | Multiple bulged bases Not in a motif group | geometric IL_7RQB_076 IL_59677.2 | |
| IL_2O44_073 | 1/A/1917:1928, 1/A/1944:1947 | No text annotation Not in a motif group | homologous IL_4WF9_077 IL_81589.2 | |
| IL_2O44_074 | 1/A/2033:2035, 1/A/2596:2597 | Major groove platform Not in a motif group | homologous IL_4WF9_078 IL_27635.1 | |
| IL_2O44_075 | 1/A/2037:2040, 1/A/2590:2594 | No text annotation Not in a motif group | ||
| IL_2O44_076 | 1/A/2050:2052, 1/A/2421:2422 | Single bulged U Not in a motif group | homologous IL_4WF9_080 IL_83039.13 | |
| IL_2O44_077 | 1/A/2053:2055, 1/A/2416:2420 | No text annotation Not in a motif group | ||
| IL_2O44_078 | 1/A/2064:2066, 1/A/2215:2218 | Isolated tHS basepair with bulges Not in a motif group | homologous IL_7A0S_077 IL_38958.7 | |
| IL_2O44_079 | 1/A/2068:2070, 1/A/2211:2213 | No text annotation Not in a motif group | homologous IL_7A0S_078 IL_95997.1 | |
| IL_2O44_080 | 1/A/2076:2078, 1/A/2177:2179 | No text annotation Not in a motif group | geometric IL_1NBS_006 IL_95997.1 | |
| IL_2O44_081 | 1/A/2078:2081, 1/A/2175:2177 | No text annotation Not in a motif group | geometric IL_4V9F_053 IL_46796.1 | |
| IL_2O44_082 | 1/A/2081:2085, 1/A/2170:2175 | No text annotation Not in a motif group | ||
| IL_2O44_085 | 1/A/2186:2188, 1/A/2196:2199 | No text annotation Not in a motif group | ||
| IL_2O44_087 | 1/A/2276:2278, 1/A/2296:2300 | Isolated tHS basepair with bulges Not in a motif group | geometric IL_7RQB_082 IL_38958.7 | |
| IL_2O44_089 | 1/A/2329:2333, 1/A/2342:2346 | Triple sheared Not in a motif group | geometric IL_5J7L_274 IL_56467.8 | |
| IL_2O44_090 | 1/A/2380:2382, 1/A/2393:2394 | Major groove platform Not in a motif group | homologous IL_7A0S_082 IL_27635.1 | |
| IL_2O44_091 | 1/A/2432:2433, 1/A/2477:2479 | Single stack bend Not in a motif group | homologous IL_7RQB_091 IL_76488.2 | |
| IL_2O44_092 | 1/A/2433:2434, 1/A/2475:2477 | Major groove platform Not in a motif group | geometric IL_7RQB_092 IL_27635.1 | |
| IL_2O44_093 | 1/A/2436:2440, 1/A/2468:2473 | No text annotation Not in a motif group | ||
| IL_2O44_095 | 1/A/2443:2449, 1/A/2459:2465 | No text annotation Not in a motif group | ||
| IL_2O44_096 | 1/A/2486:2487, 1/A/2559:2561 | Major groove platform Not in a motif group | geometric IL_5TBW_107 IL_76223.2 | |
| IL_2O44_097 | 1/A/2487:2489, 1/A/2557:2559 | Isolated cWH basepair Not in a motif group | geometric IL_3FOZ_001 IL_51629.2 | |
| IL_2O44_098 | 1/A/2489:2491, 1/A/2553:2557 | Isolated non-canonical cWW with bulges Not in a motif group | geometric IL_4WF9_095 IL_90933.2 | |
| IL_2O44_099 | 1/A/2491:2492, 1/A/2550:2553 | No text annotation Not in a motif group | homologous IL_5J7L_341 IL_71530.2 | |
| IL_2O44_100 | 1/A/2501:2502, 1/A/2519:2522 | Minor groove platform with intercalation Not in a motif group | homologous IL_5J7L_342 IL_95601.3 | |
| IL_2O44_101 | 1/A/2570:2571, 1/A/2580:2582 | Single bulged A Not in a motif group | homologous IL_7RQB_101 IL_37497.2 | |
| IL_2O44_102 | 1/A/2612:2615, 1/A/2762:2765 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_1MFQ_004 IL_30621.2 | |
| IL_2O44_103 | 1/A/2615:2619, 1/A/2754:2762 | tSH-tHS-tHW Not in a motif group | homologous IL_4WF9_099 IL_04638.1 | |
| IL_2O44_104 | 1/A/2631:2637, 1/A/2642:2647 | Sarcin-Ricin target in LSU H95; G-bulge Not in a motif group | geometric IL_7A0S_094 IL_16458.1 | |
| IL_2O44_105 | 1/A/2659:2663, 1/A/2705:2707 | C-loop Not in a motif group | homologous IL_5J7L_347 IL_63596.6 | |
| IL_2O44_106 | 1/A/2666:2670, 1/A/2698:2702 | No text annotation Not in a motif group | homologous IL_7A0S_096 IL_08296.3 | |
| IL_2O44_107 | 1/A/2674:2675, 1/A/2690:2694 | Multiple bulged bases Not in a motif group | homologous IL_7RQB_106 IL_71530.2 | |
| IL_2O44_108 | 1/A/2717:2722, 1/A/2742:2747 | UAA/GAN with extra cWW Not in a motif group | homologous IL_7RQB_107 IL_49767.5 | |
| IL_2O44_111 | 1/A/2813:2814, 1/A/2853:2855 | Single bulged G Not in a motif group | homologous IL_7A0S_099 IL_00225.2 | |
| IL_2O44_112 | 1/A/2818:2820, 1/A/2846:2849 | Decoding loop related Not in a motif group | homologous IL_7A0S_100 IL_02284.5 | |
| IL_2O44_113 | 1/A/2822:2827, 1/A/2840:2844 | No text annotation Not in a motif group | homologous IL_7A0S_101 IL_83162.5 | |
| IL_2O44_114 | 1/A/1035:1041, 1/A/1135:1150 | No text annotation Not in a motif group | geometric IL_7A0S_037 IL_50715.1 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_2O44_008 | Tandem non-canonical cWW pairs | ||
| IL_2O44_020 | No text annotation | ||
| IL_2O44_021 | No text annotation | ||
| IL_2O44_031 | UG cWW | ||
| IL_2O44_040 | No text annotation | ||
| IL_2O44_042 | No text annotation | ||
| IL_2O44_047 | No text annotation | ||
| IL_2O44_051 | No text annotation | ||
| IL_2O44_062 | No text annotation | ||
| IL_2O44_066 | No text annotation | ||
| IL_2O44_083 | No text annotation | ||
| IL_2O44_086 | UU cWW | ||
| IL_2O44_088 | No text annotation | ||
| IL_2O44_094 | UU cWW | ||
| IL_2O44_109 | No text annotation | ||
| IL_2O44_110 | No text annotation | ||
| IL_2O44_115 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J3_2O44_001 | 1/A/54:56, 1/A/69:75, 1/A/108:113 | No text annotation Not in a motif group | ||
| J3_2O44_002 | 1/A/695:702, 1/A/786:790, 1/A/800:808 | No text annotation Not in a motif group | ||
| J3_2O44_003 | 1/A/710:713, 1/A/745:749, 1/A/773:778 | No text annotation Not in a motif group | ||
| J3_2O44_004 | 1/A/1064:1068, 1/A/1092:1102, 1/A/1111:1117 | No text annotation Not in a motif group | ||
| J3_2O44_005 | 1/A/1311:1316, 1/A/1641:1643, 1/A/1656:1659 | No text annotation Not in a motif group | homologous J3_7A0S_006 NA | |
| J3_2O44_006 | 1/A/1319:1323, 1/A/1620:1627, 1/A/1636:1638 | No text annotation Not in a motif group | ||
| J3_2O44_007 | 1/A/2074:2076, 1/A/2179:2183, 1/A/2202:2207 | No text annotation Not in a motif group | ||
| J3_2O44_008 | 1/A/2274:2276, 1/A/2300:2303, 1/A/2310:2316 | No text annotation Not in a motif group | ||
| J3_2O44_009 | 1/A/2496:2499, 1/A/2524:2526, 1/A/2540:2546 | No text annotation Not in a motif group | homologous J3_7RQB_012 NA | |
| J3_2O44_010 | 1/A/30:31, 1/A/485:492, 1/A/519:520 | No text annotation Not in a motif group | ||
| J3_2O44_011 | 1/A/2789:2790, 1/A/2806:2811, 1/A/2857:2861 | No text annotation Not in a motif group |
Problematic loops
No problematic loops
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