Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
HL_5JUO_0011/A/7:17No text annotation
Not in a motif group
homologous
HL_4V88_186
HL_89881.2
HL_5JUO_0021/A/70:81No text annotation
Not in a motif group
geometric
HL_5NFV_001
HL_76539.5
HL_5JUO_0031/A/154:160Other HL
Not in a motif group
homologous
HL_4V88_188
HL_76539.5
HL_5JUO_0041/A/190:195No text annotation
Not in a motif group
HL_5JUO_0051/A/230:235No text annotation
Not in a motif group
HL_5JUO_0061/A/243:250T-loop with 1 bulged base
Not in a motif group
homologous
HL_4V88_191
HL_56241.1
HL_5JUO_0071/A/276:279No text annotation
Not in a motif group
homologous
HL_4V88_192
HL_53837.2
HL_5JUO_0081/A/330:338No text annotation
Not in a motif group
homologous
HL_4V88_193
HL_69023.2
HL_5JUO_0091/A/368:373No text annotation
Not in a motif group
homologous
HL_4V88_194
HL_50142.2
HL_5JUO_0101/A/393:404No text annotation
Not in a motif group
homologous
HL_4V88_195
HL_84288.1
HL_5JUO_0111/A/414:419UNCG
Not in a motif group
homologous
HL_4V88_196
HL_03562.2
HL_5JUO_0121/A/450:456No text annotation
Not in a motif group
geometric
HL_5NFV_001
HL_76539.5
HL_5JUO_0131/A/485:502No text annotation
Not in a motif group
HL_5JUO_0141/A/520:532No text annotation
Not in a motif group
geometric
HL_4V88_199
HL_06285.3
HL_5JUO_0151/A/569:574Other HL
Not in a motif group
homologous
HL_4V88_200
HL_53845.3
HL_5JUO_0171/A/764:772No text annotation
Not in a motif group
homologous
HL_4V88_203
HL_46766.2
HL_5JUO_0181/A/776:784No text annotation
Not in a motif group
geometric
HL_5TBW_006
HL_98984.4
HL_5JUO_0191/A/829:843No text annotation
Not in a motif group
geometric
HL_5TBW_044
HL_09829.1
HL_5JUO_0201/A/900:909No text annotation
Not in a motif group
homologous
HL_4V88_206
HL_12326.1
HL_5JUO_0211/A/937:942Other HL
Not in a motif group
homologous
HL_4V88_207
HL_87030.2
HL_5JUO_0221/A/997:1007No text annotation
Not in a motif group
homologous
HL_4V88_208
HL_12326.1
HL_5JUO_0231/A/1055:1064No text annotation
Not in a motif group
HL_5JUO_0241/A/1084:1089Other HL
Not in a motif group
homologous
HL_4V88_210
HL_35490.2
HL_5JUO_0251/A/1121:1126GNRA
Not in a motif group
homologous
HL_4V88_211
HL_35490.2
HL_5JUO_0261/A/1188:1197No text annotation
Not in a motif group
homologous
HL_4V88_212
HL_73530.2
HL_5JUO_0271/A/1238:1247No text annotation
Not in a motif group
homologous
HL_4V88_213
HL_53597.4
HL_5JUO_0281/A/1296:1301GNRA
Not in a motif group
homologous
HL_4V88_214
HL_35490.2
HL_5JUO_0291/A/1309:1316No text annotation
Not in a motif group
homologous
HL_4V88_215
HL_71554.2
HL_5JUO_0301/A/1359:1364No text annotation
Not in a motif group
geometric
HL_4V9F_003
HL_52841.1
HL_5JUO_0311/A/1396:1402No text annotation
Not in a motif group
homologous
HL_4V88_217
HL_35490.2
HL_5JUO_0321/A/1501:1506GNRA
Not in a motif group
homologous
HL_4V88_218
HL_35490.2
HL_5JUO_0331/A/1550:1561No text annotation
Not in a motif group
HL_5JUO_0341/A/1594:1602No text annotation
Not in a motif group
homologous
HL_4V88_220
HL_75828.1
HL_5JUO_0361/A/1778:1783Other HL
Not in a motif group
homologous
HL_4V88_222
HL_16173.1
HL_5JUO_0371/B/38:45No text annotation
Not in a motif group
homologous
HL_8C3A_001
HL_06192.2
HL_5JUO_0381/B/69:74No text annotation
Not in a motif group
homologous
HL_8C3A_002
HL_02862.2
HL_5JUO_0391/B/90:96No text annotation
Not in a motif group
homologous
HL_8C3A_003
HL_67216.7
HL_5JUO_0401/B/132:136No text annotation
Not in a motif group
homologous
HL_8C3A_004
HL_98426.1
HL_5JUO_0411/B/194:201T-loop with 1 bulged base
Not in a motif group
homologous
HL_5TBW_005
HL_41998.1
HL_5JUO_0421/B/208:212No text annotation
Not in a motif group
homologous
HL_8C3A_006
HL_98984.4
HL_5JUO_0431/B/216:224No text annotation
Not in a motif group
homologous
HL_5TBW_007
HL_08002.9
HL_5JUO_0441/B/278:287No text annotation
Not in a motif group
homologous
HL_8C3A_008
HL_71554.2
HL_5JUO_0451/B/303:312No text annotation
Not in a motif group
homologous
HL_8C3A_009
HL_12078.4
HL_5JUO_0461/B/356:363No text annotation
Not in a motif group
HL_5JUO_0471/B/382:387GNRA
Not in a motif group
homologous
HL_5TBW_011
HL_35490.2
HL_5JUO_0491/B/541:550No text annotation
Not in a motif group
HL_5JUO_0501/B/599:604GNRA
Not in a motif group
homologous
HL_5TBW_013
HL_35490.2
HL_5JUO_0511/B/640:649No text annotation
Not in a motif group
homologous
HL_8C3A_014
HL_41998.1
HL_5JUO_0521/B/686:694No text annotation
Not in a motif group
homologous
HL_8C3A_015
HL_03345.1
HL_5JUO_0531/B/707:712GNRA
Not in a motif group
homologous
HL_5TBW_016
HL_35490.2
HL_5JUO_0541/B/732:737GNRA
Not in a motif group
homologous
HL_5TBW_017
HL_35490.2
HL_5JUO_0551/B/763:768No text annotation
Not in a motif group
geometric
HL_5TBW_018
HL_34168.2
HL_5JUO_0561/B/844:849GNRA
Not in a motif group
homologous
HL_5TBW_019
HL_35490.2
HL_5JUO_0571/B/876:885No text annotation
Not in a motif group
homologous
HL_8C3A_020
HL_39334.6
HL_5JUO_0581/B/910:918No text annotation
Not in a motif group
homologous
HL_5TBW_021
HL_33817.1
HL_5JUO_0591/B/958:963No text annotation
Not in a motif group
homologous
HL_8C3A_022
HL_96598.1
HL_5JUO_0601/B/1023:1029GNRA
Not in a motif group
homologous
HL_5TBW_023
HL_35490.2
HL_5JUO_0611/B/1076:1083No text annotation
Not in a motif group
geometric
HL_5TBW_024
HL_71554.2
HL_5JUO_0621/B/1126:1132No text annotation
Not in a motif group
homologous
HL_8C3A_025
HL_35490.2
HL_5JUO_0631/B/1148:1155No text annotation
Not in a motif group
homologous
HL_8C3A_026
HL_64430.2
HL_5JUO_0641/B/1239:1249No text annotation
Not in a motif group
homologous
HL_8C3A_027
HL_07145.2
HL_5JUO_0651/B/1267:1274No text annotation
Not in a motif group
homologous
HL_8C3A_028
HL_84085.2
HL_5JUO_0661/B/1347:1357No text annotation
Not in a motif group
geometric
HL_4OOG_001
HL_28980.2
HL_5JUO_0671/B/1403:1408No text annotation
Not in a motif group
homologous
HL_8C3A_030
HL_35490.2
HL_5JUO_0681/B/1462:1470No text annotation
Not in a motif group
homologous
HL_8C3A_031
HL_41998.1
HL_5JUO_0691/B/1506:1512No text annotation
Not in a motif group
homologous
HL_5TBW_032
HL_46680.1
HL_5JUO_0701/B/1544:1549Other HL
Not in a motif group
homologous
HL_5TBW_033
HL_76539.5
HL_5JUO_0711/B/1566:1572No text annotation
Not in a motif group
HL_5JUO_0721/B/1598:1609No text annotation
Not in a motif group
HL_5JUO_0731/B/1634:1639GNRA
Not in a motif group
homologous
HL_5TBW_036
HL_35490.2
HL_5JUO_0741/B/1680:1688No text annotation
Not in a motif group
homologous
HL_8C3A_037
HL_84827.1
HL_5JUO_0751/B/1719:1725No text annotation
Not in a motif group
homologous
HL_5TBW_038
HL_86373.3
HL_5JUO_0761/B/1759:1766No text annotation
Not in a motif group
geometric
HL_1WZ2_007
HL_70546.1
HL_5JUO_0771/B/1792:1796No text annotation
Not in a motif group
homologous
HL_5TBW_040
HL_38927.5
HL_5JUO_0781/B/1844:1851No text annotation
Not in a motif group
homologous
HL_5TBW_041
HL_64430.2
HL_5JUO_0791/B/1862:1868GNRA with one bulged base
Not in a motif group
homologous
HL_5TBW_042
HL_35490.2
HL_5JUO_0801/B/1923:1928No text annotation
Not in a motif group
homologous
HL_8C3A_043
HL_03562.2
HL_5JUO_0821/B/2110:2114No text annotation
Not in a motif group
homologous
HL_8C3A_045
HL_86735.1
HL_5JUO_0831/B/2135:2145No text annotation
Not in a motif group
homologous
HL_8C3A_046
HL_43613.5
HL_5JUO_0841/B/2164:2170No text annotation
Not in a motif group
homologous
HL_8C3A_047
HL_35490.2
HL_5JUO_0851/B/2220:2225Other HL
Not in a motif group
homologous
HL_5TBW_048
HL_35490.2
HL_5JUO_0861/B/2253:2263No text annotation
Not in a motif group
HL_5JUO_0871/B/2292:2300No text annotation
Not in a motif group
homologous
HL_5TBW_050
HL_51824.1
HL_5JUO_0881/B/2369:2378No text annotation
Not in a motif group
homologous
HL_8C3A_051
HL_90642.6
HL_5JUO_0891/B/2440:2507No text annotation
Not in a motif group
HL_5JUO_0901/B/2534:2545No text annotation
Not in a motif group
HL_5JUO_0911/B/2568:2573No text annotation
Not in a motif group
geometric
HL_4OOG_001
HL_28980.2
HL_5JUO_0921/B/2616:2624No text annotation
Not in a motif group
homologous
HL_8C3A_055
HL_53171.2
HL_5JUO_0931/B/2632:2646No text annotation
Not in a motif group
HL_5JUO_0941/B/2673:2681No text annotation
Not in a motif group
homologous
HL_8C3A_057
HL_76406.4
HL_5JUO_0951/B/2693:2700No text annotation
Not in a motif group
homologous
HL_8C3A_058
HL_12078.4
HL_5JUO_0961/B/2724:2732No text annotation
Not in a motif group
homologous
HL_8C3A_059
HL_92229.2
HL_5JUO_0971/B/2744:2749No text annotation
Not in a motif group
homologous
HL_8C3A_060
HL_35490.2
HL_5JUO_0981/B/2776:2784No text annotation
Not in a motif group
homologous
HL_8C3A_061
HL_96598.1
HL_5JUO_0991/B/2840:2848No text annotation
Not in a motif group
homologous
HL_5TBW_061
HL_06192.2
HL_5JUO_1001/B/2897:2904No text annotation
Not in a motif group
homologous
HL_5TBW_062
HL_91104.1
HL_5JUO_1011/B/2920:2926No text annotation
Not in a motif group
geometric
HL_5TBW_063
HL_43656.2
HL_5JUO_1021/B/2963:2968No text annotation
Not in a motif group
homologous
HL_8C3A_065
HL_35490.2
HL_5JUO_1031/B/3025:3030GNRA
Not in a motif group
geometric
HL_5FQ5_003
HL_35490.2
HL_5JUO_1041/B/3067:3074No text annotation
Not in a motif group
HL_5JUO_1051/B/3110:3124No text annotation
Not in a motif group
homologous
HL_8C3A_068
HL_56677.7
HL_5JUO_1061/B/3194:3197No text annotation
Not in a motif group
homologous
HL_5TBW_068
HL_98426.1
HL_5JUO_1071/B/3240:3247No text annotation
Not in a motif group
homologous
HL_5TBW_069
HL_26380.1
HL_5JUO_1081/B/3303:3311No text annotation
Not in a motif group
homologous
HL_8C3A_071
HL_64690.1
HL_5JUO_1091/B/3350:3353No text annotation
Not in a motif group
homologous
HL_5TBW_071
HL_53837.2
HL_5JUO_1101/C/69:89No text annotation
Not in a motif group
HL_5JUO_1111/C/108:114No text annotation
Not in a motif group
homologous
HL_5TBW_075
HL_53619.1
HL_5JUO_1121/C/124:129No text annotation
Not in a motif group
homologous
HL_5TBW_076
HL_96851.2
HL_5JUO_1131/D/36:41No text annotation
Not in a motif group
geometric
HL_5NFV_001
HL_76539.5
HL_5JUO_1141/D/88:93GNRA
Not in a motif group
homologous
HL_5TBW_186
HL_35490.2
HL_5JUO_1171/EC/6862:6868No text annotation
Not in a motif group
HL_5JUO_1181/EC/6902:6911No text annotation
Not in a motif group
HL_5JUO_1191/EC/6924:6929No text annotation
Not in a motif group

Problematic loops

#loop idProblemSequence
HL_5JUO_016No text annotation
HL_5JUO_035No text annotation
HL_5JUO_048No text annotation
HL_5JUO_081No text annotation
HL_5JUO_115No text annotation
HL_5JUO_116No text annotation

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
IL_5JUO_0011/A/24:26,
1/A/600:601
Single bulged C
Not in a motif group
homologous
IL_4V88_384
IL_61258.12
IL_5JUO_0021/A/35:37,
1/A/471:473
UC cWW
Not in a motif group
homologous
IL_4V88_385
IL_70707.2
IL_5JUO_0031/A/37:41,
1/A/466:471
No text annotation
Not in a motif group
geometric
IL_4V88_386
IL_41507.1
IL_5JUO_0041/A/42:48,
1/A/431:433
No text annotation
Not in a motif group
geometric
IL_4V88_387
IL_33912.1
IL_5JUO_0051/A/50:52,
1/A/428:429
Minor groove platform
Not in a motif group
homologous
IL_4V88_388
IL_80097.1
IL_5JUO_0061/A/58:63,
1/A/87:89
No text annotation
Not in a motif group
homologous
IL_4V88_389
IL_95004.1
IL_5JUO_0071/A/64:69,
1/A/82:86
No text annotation
Not in a motif group
homologous
IL_8C3A_398
IL_77691.2
IL_5JUO_0081/A/109:112,
1/A/302:305
Tandem non-canonical cWW pairs
Not in a motif group
homologous
IL_4V88_391
IL_30621.4
IL_5JUO_0091/A/113:116,
1/A/300:301
Multiple bulged bases
Not in a motif group
homologous
IL_4V88_392
IL_44546.1
IL_5JUO_0101/A/117:122,
1/A/295:299
No text annotation
Not in a motif group
homologous
IL_4V88_393
IL_64181.2
IL_5JUO_0111/A/143:149,
1/A/165:172
tWH-tWH-tHW-tHW
Not in a motif group
homologous
IL_4V88_394
IL_80604.2
IL_5JUO_0121/A/150:153,
1/A/161:164
No text annotation
Not in a motif group
homologous
IL_8C3A_403
IL_67743.1
IL_5JUO_0131/A/186:189,
1/A/196:199
Double sheared
Not in a motif group
homologous
IL_4V88_396
IL_09705.10
IL_5JUO_0141/A/204:206,
1/A/259:263
Major groove platform with extra cWW
Not in a motif group
geometric
IL_1MMS_002
IL_05564.2
IL_5JUO_0151/A/206:208,
1/A/257:259
No text annotation
Not in a motif group
homologous
IL_4V88_398
IL_86319.2
IL_5JUO_0161/A/265:267,
1/A/288:289
Single bulged A
Not in a motif group
homologous
IL_4V88_399
IL_37497.6
IL_5JUO_0171/A/270:273,
1/A/283:285
No text annotation
Not in a motif group
homologous
IL_4V88_400
IL_47298.1
IL_5JUO_0181/A/274:276,
1/A/279:282
No text annotation
Not in a motif group
geometric
IL_3MEI_002
IL_86319.2
IL_5JUO_0191/A/310:316,
1/A/348:356
No text annotation
Not in a motif group
IL_5JUO_0201/A/318:323,
1/A/345:346
No text annotation
Not in a motif group
homologous
IL_4V88_403
IL_48100.2
IL_5JUO_0211/A/363:365,
1/A/376:381
No text annotation
Not in a motif group
homologous
IL_4V88_404
IL_11347.1
IL_5JUO_0221/A/389:391,
1/A/406:408
Isolated cWH basepair
Not in a motif group
homologous
IL_4V88_405
IL_70707.2
IL_5JUO_0231/A/411:413,
1/A/420:422
Isolated near basepair
Not in a motif group
homologous
IL_4V88_406
IL_52767.4
IL_5JUO_0241/A/439:441,
1/A/463:464
Single bulged U
Not in a motif group
homologous
IL_4V88_407
IL_83039.16
IL_5JUO_0251/A/443:447,
1/A/460:461
C-loop
Not in a motif group
geometric
IL_5J7L_018
IL_75255.1
IL_5JUO_0261/A/447:448,
1/A/458:460
Single bulged G
Not in a motif group
geometric
IL_5J7L_019
IL_00225.3
IL_5JUO_0271/A/479:483,
1/A/504:509
No text annotation
Not in a motif group
IL_5JUO_0281/A/517:518,
1/A/533:535
Minor groove platform
Not in a motif group
geometric
IL_4LFB_054
IL_80097.1
IL_5JUO_0291/A/518:520,
1/A/532:533
Minor groove platform
Not in a motif group
geometric
IL_4V88_412
IL_80097.1
IL_5JUO_0301/A/550:557,
1/A/587:588
SSU/LSU pseudoknot
Not in a motif group
geometric
IL_4V88_413
IL_15861.7
IL_5JUO_0311/A/557:559,
1/A/586:587
Single bulged U
Not in a motif group
homologous
IL_4V88_414
IL_83039.16
IL_5JUO_0321/A/562:568,
1/A/575:583
No text annotation
Not in a motif group
homologous
IL_8C3A_425
IL_55871.1
IL_5JUO_0331/A/616:622,
1/A/1104:1105
No text annotation
Not in a motif group
homologous
IL_4V88_416
IL_69996.1
IL_5JUO_0341/A/624:626,
1/A/973:975
No text annotation
Not in a motif group
homologous
IL_4V88_417
IL_86319.2
IL_5JUO_0351/A/627:631,
1/A/968:972
tSH-tHW-tHS
Not in a motif group
homologous
IL_4V88_418
IL_17136.1
IL_5JUO_0361/A/646:648,
1/A/686:688
No text annotation
Not in a motif group
homologous
IL_4V88_419
IL_86319.2
IL_5JUO_0371/A/651:657,
1/A/677:683
No text annotation
Not in a motif group
IL_5JUO_0381/A/746:747,
1/A/802:805
Major groove minor groove platform; mini C-loop
Not in a motif group
homologous
IL_4V88_423
IL_09061.8
IL_5JUO_0391/A/748:750,
1/A/799:801
No text annotation
Not in a motif group
homologous
IL_4V88_424
IL_86319.2
IL_5JUO_0401/A/751:759,
1/A/791:798
No text annotation
Not in a motif group
homologous
IL_4V88_425
IL_69091.1
IL_5JUO_0411/A/865:866,
1/A/962:965
Major groove platform; stack outside cWW
Not in a motif group
homologous
IL_4V88_428
IL_50694.2
IL_5JUO_0421/A/867:870,
1/A/957:961
Tandem non-canonical cWW pairs
Not in a motif group
homologous
IL_4V88_429
IL_30621.4
IL_5JUO_0431/A/871:873,
1/A/954:956
No text annotation
Not in a motif group
geometric
IL_4V88_448
IL_27844.2
IL_5JUO_0441/A/874:878,
1/A/950:953
Tandem non-canonical cWW pairs
Not in a motif group
homologous
IL_4V88_431
IL_30621.4
IL_5JUO_0451/A/886:889,
1/A/923:926
Tandem non-canonical cWW pairs
Not in a motif group
homologous
IL_4V88_432
IL_30621.4
IL_5JUO_0461/A/893:899,
1/A/910:919
No text annotation
Not in a motif group
homologous
IL_8C3A_440
IL_22252.1
IL_5JUO_0471/A/985:990,
1/A/1014:1016
Other IL
Not in a motif group
homologous
IL_4V88_435
IL_22046.1
IL_5JUO_0481/A/990:994,
1/A/1010:1014
tSH-tHW-tHS
Not in a motif group
geometric
IL_4WF9_052
IL_17136.1
IL_5JUO_0491/A/1034:1036,
1/A/1095:1101
No text annotation
Not in a motif group
homologous
IL_4V88_437
IL_19557.3
IL_5JUO_0501/A/1041:1044,
1/A/1074:1077
Tandem non-canonical cWW pairs
Not in a motif group
homologous
IL_4V88_438
IL_30621.4
IL_5JUO_0511/A/1051:1053,
1/A/1066:1067
Single bulged U
Not in a motif group
homologous
IL_4V88_439
IL_83039.16
IL_5JUO_0521/A/1111:1119,
1/A/1128:1134
9x7 Sarcin-Ricin with inserted C; G-bulge
Not in a motif group
geometric
IL_6CZR_146
IL_68633.1
IL_5JUO_0531/A/1146:1147,
1/A/1630:1632
Single bulged A
Not in a motif group
homologous
IL_4V88_441
IL_37497.6
IL_5JUO_0541/A/1149:1151,
1/A/1627:1628
Single bulged G
Not in a motif group
homologous
IL_4V88_442
IL_00225.3
IL_5JUO_0551/A/1157:1160,
1/A/1617:1621
C-loop
Not in a motif group
homologous
IL_4V88_443
IL_63596.6
IL_5JUO_0561/A/1173:1176,
1/A/1463:1466
Tandem non-canonical cWW pairs
Not in a motif group
geometric
IL_6CZR_168
IL_67743.1
IL_5JUO_0571/A/1178:1179,
1/A/1459:1461
Minor groove platform
Not in a motif group
homologous
IL_4V88_445
IL_42622.4
IL_5JUO_0581/A/1213:1215,
1/A/1448:1450
No text annotation
Not in a motif group
homologous
IL_4V88_446
IL_86319.2
IL_5JUO_0591/A/1224:1233,
1/A/1252:1259
Kink-turn
Not in a motif group
homologous
IL_4V88_447
IL_34780.1
IL_5JUO_0601/A/1234:1237,
1/A/1248:1251
No text annotation
Not in a motif group
IL_5JUO_0611/A/1268:1270,
1/A/1440:1441
Single bulged U
Not in a motif group
homologous
IL_4V88_449
IL_83039.16
IL_5JUO_0621/A/1271:1276,
1/A/1436:1439
No text annotation
Not in a motif group
IL_5JUO_0631/A/1276:1279,
1/A/1429:1436
No text annotation
Not in a motif group
IL_5JUO_0641/A/1280:1281,
1/A/1426:1428
Single bulged A
Not in a motif group
homologous
IL_4V88_452
IL_37497.6
IL_5JUO_0651/A/1290:1292,
1/A/1323:1325
Isolated cWH basepair
Not in a motif group
homologous
IL_4V88_453
IL_70707.2
IL_5JUO_0661/A/1306:1308,
1/A/1317:1318
No text annotation
Not in a motif group
IL_5JUO_0671/A/1339:1342,
1/A/1383:1385
No text annotation
Not in a motif group
homologous
IL_4V88_455
IL_27844.2
IL_5JUO_0681/A/1345:1348,
1/A/1377:1380
Minor groove platform
Not in a motif group
homologous
IL_4V88_456
IL_76458.1
IL_5JUO_0691/A/1352:1355,
1/A/1368:1373
No text annotation
Not in a motif group
IL_5JUO_0701/A/1389:1391,
1/A/1407:1412
Major groove platform; stack outside cWW
Not in a motif group
homologous
IL_4V88_458
IL_58032.1
IL_5JUO_0711/A/1480:1487,
1/A/1519:1527
No text annotation
Not in a motif group
homologous
IL_4V88_459
IL_10447.1
IL_5JUO_0721/A/1488:1494,
1/A/1513:1518
No text annotation
Not in a motif group
homologous
IL_4V88_460
IL_75461.4
IL_5JUO_0731/A/1495:1498,
1/A/1509:1512
Tandem non-canonical cWW pairs
Not in a motif group
homologous
IL_4V88_461
IL_30621.4
IL_5JUO_0741/A/1540:1546,
1/A/1565:1571
No text annotation
Not in a motif group
homologous
IL_8C3A_469
IL_10092.1
IL_5JUO_0751/A/1636:1638,
1/A/1764:1767
No text annotation
Not in a motif group
geometric
IL_5J7L_058
IL_36143.3
IL_5JUO_0761/A/1638:1641,
1/A/1760:1764
No text annotation
Not in a motif group
homologous
IL_4V88_464
IL_99670.1
IL_5JUO_0771/A/1642:1644,
1/A/1757:1759
No text annotation
Not in a motif group
homologous
IL_4V88_465
IL_86319.2
IL_5JUO_0781/A/1644:1647,
1/A/1753:1757
No text annotation
Not in a motif group
geometric
IL_2O3V_003
IL_04655.1
IL_5JUO_0791/A/1650:1652,
1/A/1748:1750
AA cWW
Not in a motif group
homologous
IL_4V88_467
IL_86319.2
IL_5JUO_0801/A/1653:1656,
1/A/1744:1747
Double sheared
Not in a motif group
homologous
IL_4V88_468
IL_09705.10
IL_5JUO_0811/A/1656:1658,
1/A/1743:1744
Single bulged U
Not in a motif group
homologous
IL_4V88_469
IL_83039.16
IL_5JUO_0821/A/1665:1667,
1/A/1734:1736
No text annotation
Not in a motif group
homologous
IL_4V88_470
IL_70707.2
IL_5JUO_0831/A/1669:1672,
1/A/1729:1732
Double sheared
Not in a motif group
geometric
IL_5J7L_256
IL_09705.10
IL_5JUO_0841/A/1672:1674,
1/A/1727:1729
No text annotation
Not in a motif group
homologous
IL_4V88_472
IL_86319.2
IL_5JUO_0851/A/1675:1678,
1/A/1723:1726
Tandem non-canonical cWW pairs
Not in a motif group
geometric
IL_4UYK_003
IL_30621.4
IL_5JUO_0861/A/1678:1682,
1/A/1719:1723
Triple sheared
Not in a motif group
homologous
IL_4V88_474
IL_56467.8
IL_5JUO_0871/A/1687:1690,
1/A/1711:1714
No text annotation
Not in a motif group
IL_5JUO_0881/B/27:28,
1/B/56:58
No text annotation
Not in a motif group
homologous
IL_8C3A_004
IL_76488.4
IL_5JUO_0891/B/31:38,
1/B/45:53
tSH-tHW-tHH-tHS
Not in a motif group
geometric
IL_5TBW_005
IL_35728.2
IL_5JUO_0901/B/82:89,
1/B/97:103
No text annotation
Not in a motif group
homologous
IL_8C3A_006
IL_88613.1
IL_5JUO_0911/B/123:124,
1/B/144:149
No text annotation
Not in a motif group
geometric
IL_5TBW_007
IL_19724.2
IL_5JUO_0921/B/125:127,
1/B/141:143
No text annotation
Not in a motif group
homologous
IL_8C3A_008
IL_86319.2
IL_5JUO_0931/B/163:166,
1/B/256:258
No text annotation
Not in a motif group
IL_5JUO_0941/B/168:170,
1/B/248:254
No text annotation
Not in a motif group
IL_5JUO_0951/B/176:179,
1/B/237:242
No text annotation
Not in a motif group
IL_5JUO_0961/B/189:191,
1/B/204:205
No text annotation
Not in a motif group
homologous
IL_8C3A_013
IL_83039.16
IL_5JUO_0971/B/335:339,
1/C/25:28
Tandem non-canonical cWW pairs
Not in a motif group
geometric
IL_7A0S_040
IL_30621.4
IL_5JUO_0981/B/376:379,
1/B/390:403
No text annotation
Not in a motif group
homologous
IL_5TBW_014
IL_60992.6
IL_5JUO_0991/B/404:412,
1/C/11:19
No text annotation
Not in a motif group
IL_5JUO_1001/B/429:431,
1/B/628:630
No text annotation
Not in a motif group
homologous
IL_5TBW_016
IL_70707.2
IL_5JUO_1011/B/445:450,
1/B/486:489
No text annotation
Not in a motif group
IL_5JUO_1021/B/512:513,
1/B/577:579
Single bulged A
Not in a motif group
homologous
IL_5TBW_018
IL_37497.6
IL_5JUO_1031/B/517:525,
1/B/567:573
No text annotation
Not in a motif group
homologous
IL_5TBW_019
IL_23992.1
IL_5JUO_1041/B/531:538,
1/B/553:561
No text annotation
Not in a motif group
homologous
IL_5TBW_020
IL_07703.1
IL_5JUO_1051/B/668:670,
1/B/792:794
No text annotation
Not in a motif group
homologous
IL_8C3A_023
IL_86319.2
IL_5JUO_1061/B/680:684,
1/B/696:700
No text annotation
Not in a motif group
homologous
IL_5TBW_022
IL_74284.1
IL_5JUO_1071/B/725:728,
1/B/741:745
No text annotation
Not in a motif group
homologous
IL_8C3A_025
IL_07235.1
IL_5JUO_1081/B/752:753,
1/B/779:781
No text annotation
Not in a motif group
homologous
IL_8C3A_026
IL_37497.6
IL_5JUO_1091/B/755:756,
1/B/775:777
Single bulged U
Not in a motif group
homologous
IL_5TBW_025
IL_83039.16
IL_5JUO_1101/B/758:763,
1/B/768:773
No text annotation
Not in a motif group
homologous
IL_8C3A_028
IL_19954.2
IL_5JUO_1111/B/803:805,
1/B/938:940
No text annotation
Not in a motif group
homologous
IL_8C3A_029
IL_86319.2
IL_5JUO_1121/B/805:809,
1/B/931:938
No text annotation
Not in a motif group
geometric
IL_5TBW_028
IL_17470.6
IL_5JUO_1131/B/833:834,
1/B/859:861
Single bulged G
Not in a motif group
geometric
IL_5TBW_029
IL_00225.3
IL_5JUO_1141/B/834:839,
1/B/854:859
Triple sheared with non-canonical cWW
Not in a motif group
geometric
IL_7A0S_018
IL_86929.2
IL_5JUO_1151/B/869:872,
1/B/888:890
No text annotation
Not in a motif group
homologous
IL_8C3A_034
IL_05564.2
IL_5JUO_1161/B/873:875,
1/B/886:887
No text annotation
Not in a motif group
homologous
IL_8C3A_035
IL_83039.16
IL_5JUO_1171/B/907:909,
1/B/919:923
No text annotation
Not in a motif group
homologous
IL_8C3A_036
IL_90991.6
IL_5JUO_1181/B/954:956,
1/B/965:967
No text annotation
Not in a motif group
homologous
IL_8C3A_037
IL_86319.2
IL_5JUO_1191/B/969:970,
1/B/1111:1113
No text annotation
Not in a motif group
homologous
IL_8C3A_038
IL_76488.4
IL_5JUO_1201/B/977:981,
1/B/1102:1104
No text annotation
Not in a motif group
homologous
IL_5TBW_036
IL_67474.4
IL_5JUO_1211/B/989:997,
1/B/1052:1060
No text annotation
Not in a motif group
IL_5JUO_1221/B/997:998,
1/B/1050:1052
No text annotation
Not in a motif group
homologous
IL_8C3A_042
IL_42622.4
IL_5JUO_1231/B/999:1004,
1/B/1046:1049
C-loop
Not in a motif group
homologous
IL_5TBW_040
IL_02509.1
IL_5JUO_1241/B/1005:1009,
1/B/1041:1045
No text annotation
Not in a motif group
homologous
IL_8C3A_044
IL_05145.2
IL_5JUO_1251/B/1009:1011,
1/B/1039:1041
No text annotation
Not in a motif group
homologous
IL_8C3A_045
IL_86319.2
IL_5JUO_1261/B/1014:1018,
1/B/1034:1036
No text annotation
Not in a motif group
IL_5JUO_1271/B/1069:1071,
1/B/1087:1089
No text annotation
Not in a motif group
homologous
IL_8C3A_047
IL_86319.2
IL_5JUO_1281/B/1074:1076,
1/B/1083:1084
No text annotation
Not in a motif group
homologous
IL_8C3A_048
IL_00225.3
IL_5JUO_1291/B/1120:1122,
1/B/1136:1138
No text annotation
Not in a motif group
homologous
IL_5TBW_046
IL_86319.2
IL_5JUO_1301/B/1167:1171,
1/B/1328:1332
No text annotation
Not in a motif group
homologous
IL_8C3A_051
IL_89002.2
IL_5JUO_1311/B/1173:1180,
1/B/1325:1326
SSU/LSU pseudoknot
Not in a motif group
geometric
IL_5TBW_049
IL_15861.7
IL_5JUO_1321/B/1180:1182,
1/B/1324:1325
Single bulged U
Not in a motif group
homologous
IL_5TBW_050
IL_83039.16
IL_5JUO_1331/B/1187:1194,
1/B/1314:1319
No text annotation
Not in a motif group
homologous
IL_5TBW_051
IL_27086.1
IL_5JUO_1341/B/1194:1205,
1/B/1299:1314
No text annotation
Not in a motif group
geometric
IL_5TBW_052
IL_53762.1
IL_5JUO_1351/B/1207:1209,
1/B/1296:1297
No text annotation
Not in a motif group
homologous
IL_8C3A_056
IL_83039.16
IL_5JUO_1361/B/1218:1226,
1/B/1283:1287
Kink-turn
Not in a motif group
homologous
IL_5TBW_054
IL_90538.4
IL_5JUO_1371/B/1234:1238,
1/B/1250:1254
No text annotation
Not in a motif group
homologous
IL_8C3A_058
IL_30542.3
IL_5JUO_1381/B/1262:1266,
1/B/1275:1277
No text annotation
Not in a motif group
homologous
IL_8C3A_059
IL_05564.2
IL_5JUO_1391/B/1376:1378,
1/B/1428:1431
Isolated cWS basepair
Not in a motif group
homologous
IL_5TBW_057
IL_52767.4
IL_5JUO_1401/B/1385:1387,
1/B/1420:1421
Single bulged A
Not in a motif group
homologous
IL_5TBW_058
IL_37497.6
IL_5JUO_1411/B/1388:1395,
1/B/1415:1419
Kink-turn
Not in a motif group
homologous
IL_5TBW_059
IL_70923.2
IL_5JUO_1421/B/1398:1400,
1/B/1411:1412
Single bulged A
Not in a motif group
homologous
IL_5TBW_060
IL_37497.6
IL_5JUO_1431/B/1500:1505,
1/B/1513:1516
No text annotation
Not in a motif group
homologous
IL_5TBW_062
IL_93630.2
IL_5JUO_1441/B/1532:1536,
1/B/1585:1590
No text annotation
Not in a motif group
homologous
IL_8C3A_067
IL_89002.2
IL_5JUO_1451/B/1618:1620,
1/B/1825:1826
Single stack bend
Not in a motif group
geometric
IL_5J7L_249
IL_76488.4
IL_5JUO_1461/B/1623:1625,
1/B/1818:1822
No text annotation
Not in a motif group
homologous
IL_8C3A_071
IL_43275.1
IL_5JUO_1471/B/1627:1631,
1/B/1811:1816
No text annotation
Not in a motif group
IL_5JUO_1481/B/1645:1650,
1/B/1805:1810
No text annotation
Not in a motif group
IL_5JUO_1491/B/1661:1663,
1/B/1786:1788
No text annotation
Not in a motif group
homologous
IL_8C3A_074
IL_86319.2
IL_5JUO_1501/B/1669:1670,
1/B/1778:1780
No text annotation
Not in a motif group
homologous
IL_8C3A_075
IL_61258.12
IL_5JUO_1511/B/1670:1671,
1/B/1776:1778
No text annotation
Not in a motif