7ASP | Motifs

86 Hairpin loops
122 Internal loops
17 Junction loops

Valid loops

#	loop id	location	annotation	motif
1	HL_7ASP_001 ➜	1/3/36:42	NA	NA
2	HL_7ASP_002 ➜	1/3/79:92	NA	NA
3	HL_7ASP_003 ➜	1/X/158:163	NA	NA
4	HL_7ASP_004 ➜	1/X/267:276	NA	NA
5	HL_7ASP_005 ➜	1/X/303:310	NA	NA
6	HL_7ASP_006 ➜	1/X/330:340	NA	NA
7	HL_7ASP_007 ➜	1/X/387:392	NA	NA
8	HL_7ASP_008 ➜	1/X/426:433	NA	NA
9	HL_7ASP_009 ➜	1/X/529:536	NA	NA
10	HL_7ASP_010 ➜	1/X/600:655	NA	NA
11	HL_7ASP_011 ➜	1/X/697:706	NA	NA
12	HL_7ASP_012 ➜	1/X/794:804	NA	NA
13	HL_7ASP_014 ➜	1/X/872:877	NA	NA
14	HL_7ASP_015 ➜	1/X/907:912	NA	NA
15	HL_7ASP_016 ➜	1/X/1020:1029	NA	NA
16	HL_7ASP_017 ➜	1/X/1081:1118	NA	NA
17	HL_7ASP_018 ➜	1/X/1175:1183	NA	NA
18	HL_7ASP_019 ➜	1/X/1270:1287	NA	NA
19	HL_7ASP_020 ➜	1/X/1324:1335	NA	NA
20	HL_7ASP_021 ➜	1/X/1363:1382	NA	NA
21	HL_7ASP_022 ➜	1/X/1451:1473	NA	NA
22	HL_7ASP_023 ➜	1/X/1526:1532	NA	NA
23	HL_7ASP_024 ➜	1/Y/67:74	NA	NA
24	HL_7ASP_025 ➜	1/Y/87:95	NA	NA
25	HL_7ASP_026 ➜	1/Y/122:127	NA	NA
26	HL_7ASP_027 ➜	1/Y/130:148	NA	NA
27	HL_7ASP_029 ➜	1/Y/197:204	NA	NA
28	HL_7ASP_030 ➜	1/Y/249:255	NA	NA
29	HL_7ASP_032 ➜	1/Y/348:355	NA	NA
30	HL_7ASP_033 ➜	1/Y/370:378	NA	NA
31	HL_7ASP_034 ➜	1/Y/427:439	NA	NA
32	HL_7ASP_035 ➜	1/Y/456:463	NA	NA
33	HL_7ASP_036 ➜	1/Y/508:513	NA	NA
34	HL_7ASP_037 ➜	1/Y/533:538	NA	NA
35	HL_7ASP_038 ➜	1/Y/587:594	NA	NA
36	HL_7ASP_039 ➜	1/Y/609:618	NA	NA
37	HL_7ASP_040 ➜	1/Y/655:661	NA	NA
38	HL_7ASP_041 ➜	1/Y/674:679	NA	NA
39	HL_7ASP_042 ➜	1/Y/686:692	NA	NA
40	HL_7ASP_044 ➜	1/Y/789:798	NA	NA
41	HL_7ASP_045 ➜	1/Y/823:831	NA	NA
42	HL_7ASP_046 ➜	1/Y/871:876	NA	NA
43	HL_7ASP_048 ➜	1/Y/999:1006	NA	NA
44	HL_7ASP_049 ➜	1/Y/1022:1029	NA	NA
45	HL_7ASP_051 ➜	1/Y/1210:1223	NA	NA
46	HL_7ASP_052 ➜	1/Y/1260:1265	NA	NA
47	HL_7ASP_053 ➜	1/Y/1318:1326	NA	NA
48	HL_7ASP_054 ➜	1/Y/1354:1373	NA	NA
49	HL_7ASP_055 ➜	1/Y/1400:1405	NA	NA
50	HL_7ASP_056 ➜	1/Y/1426:1435	NA	NA
51	HL_7ASP_058 ➜	1/Y/1612:1615	NA	NA
52	HL_7ASP_059 ➜	1/Y/1656:1663	NA	NA
53	HL_7ASP_060 ➜	1/Y/1673:1681	NA	NA
54	HL_7ASP_061 ➜	1/Y/1735:1740	NA	NA
55	HL_7ASP_062 ➜	1/Y/1761:1769	NA	NA
56	HL_7ASP_063 ➜	1/Y/1779:1783	NA	NA
57	HL_7ASP_064 ➜	1/Y/1804:1814	NA	NA
58	HL_7ASP_065 ➜	1/Y/1833:1838	NA	NA
59	HL_7ASP_066 ➜	1/Y/1894:1901	NA	NA
60	HL_7ASP_067 ➜	1/Y/1974:1986	NA	NA
61	HL_7ASP_068 ➜	1/Y/2054:2063	NA	NA
62	HL_7ASP_070 ➜	1/Y/2236:2242	NA	NA
63	HL_7ASP_071 ➜	1/Y/2275:2283	NA	NA
64	HL_7ASP_072 ➜	1/Y/2291:2303	NA	NA
65	HL_7ASP_074 ➜	1/Y/2350:2359	NA	NA
66	HL_7ASP_075 ➜	1/Y/2382:2389	NA	NA
67	HL_7ASP_076 ➜	1/Y/2400:2407	NA	NA
68	HL_7ASP_077 ➜	1/Y/2431:2440	NA	NA
69	HL_7ASP_078 ➜	1/Y/2498:2506	NA	NA
70	HL_7ASP_079 ➜	1/Y/2554:2563	NA	NA
71	HL_7ASP_080 ➜	1/Y/2578:2584	NA	NA
72	HL_7ASP_081 ➜	1/Y/2621:2626	NA	NA
73	HL_7ASP_083 ➜	1/Y/2727:2734	NA	NA
74	HL_7ASP_084 ➜	1/Y/2772:2786	NA	NA
75	HL_7ASP_085 ➜	1/Y/2839:2847	NA	NA
76	HL_7ASP_086 ➜	1/Y/2876:2881	NA	NA

Problematic loops

#	loop id	Problem	Sequence
1	HL_7ASP_013 ➜	missing nts	NA
2	HL_7ASP_028 ➜	missing nts	NA
3	HL_7ASP_031 ➜	missing nts	NA
4	HL_7ASP_043 ➜	missing nts	NA
5	HL_7ASP_047 ➜	missing nts	NA
6	HL_7ASP_050 ➜	missing nts	NA
7	HL_7ASP_057 ➜	missing nts	NA
8	HL_7ASP_069 ➜	missing nts	NA
9	HL_7ASP_073 ➜	incomplete nts	NA
10	HL_7ASP_082 ➜	missing nts	NA

Valid loops

#	loop id	location	annotation	motif
1	IL_7ASP_001 ➜	1/3/2:5,1/3/110:113	NA	NA
2	IL_7ASP_002 ➜	1/3/5:8,1/3/107:110	NA	NA
3	IL_7ASP_003 ➜	1/3/14:16,1/3/63:66	NA	NA
4	IL_7ASP_004 ➜	1/3/20:27,1/3/53:59	NA	NA
5	IL_7ASP_005 ➜	1/3/28:29,1/3/49:52	NA	NA
6	IL_7ASP_006 ➜	1/3/32:36,1/3/42:46	NA	NA
7	IL_7ASP_007 ➜	1/X/29:33,1/X/560:563	NA	NA
8	IL_7ASP_008 ➜	1/X/128:131,1/X/239:240	NA	NA
9	IL_7ASP_009 ➜	1/X/132:138,1/X/233:238	NA	NA
10	IL_7ASP_010 ➜	1/X/153:157,1/X/164:168	NA	NA
11	IL_7ASP_011 ➜	1/X/250:255,1/X/285:292	NA	NA
12	IL_7ASP_012 ➜	1/X/299:303,1/X/310:317	NA	NA
13	IL_7ASP_013 ➜	1/X/328:330,1/X/340:341	NA	NA
14	IL_7ASP_014 ➜	1/X/375:377,1/X/400:401	NA	NA
15	IL_7ASP_015 ➜	1/X/379:383,1/X/397:398	NA	NA
16	IL_7ASP_016 ➜	1/X/383:384,1/X/395:397	NA	NA
17	IL_7ASP_017 ➜	1/X/512:520,1/X/547:549	NA	NA
18	IL_7ASP_018 ➜	1/X/522:529,1/X/536:545	NA	NA
19	IL_7ASP_019 ➜	1/X/896:905,1/X/914:921	NA	NA
20	IL_7ASP_020 ➜	1/X/935:938,1/X/1400:1402	NA	NA
21	IL_7ASP_021 ➜	1/X/1003:1007,1/X/1056:1057	NA	NA
22	IL_7ASP_022 ➜	1/X/1008:1020,1/X/1029:1055	NA	NA
23	IL_7ASP_023 ➜	1/X/1059:1069,1/X/1214:1221	NA	NA
24	IL_7ASP_024 ➜	1/X/1069:1072,1/X/1208:1214	NA	NA
25	IL_7ASP_025 ➜	1/X/1072:1073,1/X/1206:1208	NA	NA
26	IL_7ASP_026 ➜	1/X/1073:1075,1/X/1204:1206	NA	NA
27	IL_7ASP_027 ➜	1/X/1127:1175,1/X/1183:1196	NA	NA
28	IL_7ASP_028 ➜	1/X/1265:1270,1/X/1287:1294	NA	NA
29	IL_7ASP_029 ➜	1/X/1314:1319,1/X/1340:1345	NA	NA
30	IL_7ASP_030 ➜	1/X/1427:1433,1/X/1490:1496	NA	NA
31	IL_7ASP_031 ➜	1/X/1435:1438,1/X/1485:1488	NA	NA
32	IL_7ASP_032 ➜	1/X/1441:1446,1/X/1478:1482	NA	NA
33	IL_7ASP_033 ➜	1/X/1446:1448,1/X/1476:1478	NA	NA
34	IL_7ASP_034 ➜	1/X/1524:1526,1/X/1532:1535	NA	NA
35	IL_7ASP_035 ➜	1/Y/5:7,1/Y/2915:2917	NA	NA
36	IL_7ASP_036 ➜	1/Y/42:44,1/Y/480:483	NA	NA
37	IL_7ASP_037 ➜	1/Y/77:86,1/Y/96:108	NA	NA
38	IL_7ASP_038 ➜	1/Y/187:189,1/Y/212:214	NA	NA
39	IL_7ASP_039 ➜	1/Y/190:197,1/Y/204:211	NA	NA
40	IL_7ASP_040 ➜	1/Y/241:248,1/Y/256:262	NA	NA
41	IL_7ASP_041 ➜	1/Y/276:278,1/Y/292:294	NA	NA
42	IL_7ASP_042 ➜	1/Y/278:283,1/Y/288:292	NA	NA
43	IL_7ASP_043 ➜	1/Y/305:306,1/Y/409:412	NA	NA
44	IL_7ASP_044 ➜	1/Y/581:584,1/Y/597:600	NA	NA
45	IL_7ASP_045 ➜	1/Y/607:609,1/Y/618:620	NA	NA
46	IL_7ASP_046 ➜	1/Y/637:640,1/Y/705:708	NA	NA
47	IL_7ASP_047 ➜	1/Y/649:653,1/Y/663:667	NA	NA
48	IL_7ASP_048 ➜	1/Y/716:723,1/Y/844:853	NA	NA
49	IL_7ASP_049 ➜	1/Y/747:752,1/Y/769:775	NA	NA
50	IL_7ASP_050 ➜	1/Y/783:785,1/Y/802:803	NA	NA
51	IL_7ASP_051 ➜	1/Y/882:885,1/Y/982:986	NA	NA
52	IL_7ASP_052 ➜	1/Y/889:893,1/Y/975:978	NA	NA
53	IL_7ASP_053 ➜	1/Y/896:898,1/Y/969:972	NA	NA
54	IL_7ASP_054 ➜	1/Y/901:907,1/Y/960:966	NA	NA
55	IL_7ASP_055 ➜	1/Y/907:908,1/Y/958:960	NA	NA
56	IL_7ASP_056 ➜	1/Y/909:913,1/Y/954:957	NA	NA
57	IL_7ASP_057 ➜	1/Y/1038:1040,1/Y/1203:1204	NA	NA
58	IL_7ASP_058 ➜	1/Y/1042:1046,1/Y/1197:1201	NA	NA
59	IL_7ASP_059 ➜	1/Y/1048:1055,1/Y/1194:1195	NA	NA
60	IL_7ASP_060 ➜	1/Y/1055:1057,1/Y/1193:1194	NA	NA
61	IL_7ASP_061 ➜	1/Y/1061:1068,1/Y/1184:1189	NA	NA
62	IL_7ASP_062 ➜	1/Y/1068:1074,1/Y/1168:1184	NA	NA
63	IL_7ASP_063 ➜	1/Y/1075:1078,1/Y/1165:1167	NA	NA
64	IL_7ASP_064 ➜	1/Y/1081:1083,1/Y/1160:1162	NA	NA
65	IL_7ASP_065 ➜	1/Y/1235:1237,1/Y/1285:1288	NA	NA
66	IL_7ASP_066 ➜	1/Y/1243:1246,1/Y/1276:1279	NA	NA
67	IL_7ASP_067 ➜	1/Y/1246:1253,1/Y/1272:1276	NA	NA
68	IL_7ASP_068 ➜	1/Y/1257:1259,1/Y/1266:1268	NA	NA
69	IL_7ASP_069 ➜	1/Y/1300:1307,1/Y/2038:2044	NA	NA
70	IL_7ASP_070 ➜	1/Y/1352:1354,1/Y/1373:1374	NA	NA
71	IL_7ASP_071 ➜	1/Y/1388:1392,1/Y/1413:1417	NA	NA
72	IL_7ASP_072 ➜	1/Y/1394:1398,1/Y/1407:1411	NA	NA
73	IL_7ASP_073 ➜	1/Y/1447:1452,1/Y/1631:1636	NA	NA
74	IL_7ASP_075 ➜	1/Y/1461:1465,1/Y/1624:1627	NA	NA
75	IL_7ASP_076 ➜	1/Y/1477:1517,1/Y/1563:1607	NA	NA
76	IL_7ASP_077 ➜	1/Y/1518:1522,1/Y/1558:1562	NA	NA
77	IL_7ASP_078 ➜	1/Y/1695:1700,1/Y/2031:2033	NA	NA
78	IL_7ASP_079 ➜	1/Y/1707:1713,1/Y/2020:2024	NA	NA
79	IL_7ASP_080 ➜	1/Y/1713:1718,1/Y/2017:2020	NA	NA
80	IL_7ASP_081 ➜	1/Y/1730:1735,1/Y/1740:1746	NA	NA
81	IL_7ASP_082 ➜	1/Y/1757:1761,1/Y/1769:1772	NA	NA
82	IL_7ASP_083 ➜	1/Y/1797:1798,1/Y/2007:2009	NA	NA
83	IL_7ASP_084 ➜	1/Y/1825:1831,1/Y/1840:1848	NA	NA
84	IL_7ASP_085 ➜	1/Y/1864:1867,1/Y/1929:1930	NA	NA
85	IL_7ASP_086 ➜	1/Y/1867:1869,1/Y/1925:1929	NA	NA
86	IL_7ASP_087 ➜	1/Y/1872:1877,1/Y/1919:1922	NA	NA
87	IL_7ASP_088 ➜	1/Y/1877:1882,1/Y/1914:1919	NA	NA
88	IL_7ASP_089 ➜	1/Y/1882:1890,1/Y/1906:1914	NA	NA
89	IL_7ASP_090 ➜	1/Y/1890:1894,1/Y/1901:1906	NA	NA
90	IL_7ASP_091 ➜	1/Y/1960:1961,1/Y/1991:1994	NA	NA
91	IL_7ASP_092 ➜	1/Y/1961:1972,1/Y/1988:1991	NA	NA
92	IL_7ASP_093 ➜	1/Y/2076:2079,1/Y/2644:2646	NA	NA
93	IL_7ASP_094 ➜	1/Y/2081:2083,1/Y/2639:2642	NA	NA
94	IL_7ASP_095 ➜	1/Y/2094:2096,1/Y/2469:2470	NA	NA
95	IL_7ASP_096 ➜	1/Y/2097:2098,1/Y/2465:2468	NA	NA
96	IL_7ASP_097 ➜	1/Y/2108:2110,1/Y/2263:2266	NA	NA
97	IL_7ASP_098 ➜	1/Y/2111:2113,1/Y/2260:2262	NA	NA
98	IL_7ASP_099 ➜	1/Y/2123:2126,1/Y/2217:2220	NA	NA
99	IL_7ASP_100 ➜	1/Y/2129:2132,1/Y/2211:2214	NA	NA
100	IL_7ASP_101 ➜	1/Y/2229:2231,1/Y/2247:2248	NA	NA
101	IL_7ASP_102 ➜	1/Y/2377:2380,1/Y/2391:2394	NA	NA
102	IL_7ASP_103 ➜	1/Y/2428:2430,1/Y/2441:2442	NA	NA
103	IL_7ASP_104 ➜	1/Y/2480:2481,1/Y/2525:2527	NA	NA
104	IL_7ASP_105 ➜	1/Y/2481:2482,1/Y/2523:2525	NA	NA
105	IL_7ASP_106 ➜	1/Y/2484:2486,1/Y/2520:2521	NA	NA
106	IL_7ASP_107 ➜	1/Y/2486:2488,1/Y/2516:2520	NA	NA
107	IL_7ASP_108 ➜	1/Y/2493:2497,1/Y/2507:2511	NA	NA
108	IL_7ASP_109 ➜	1/Y/2534:2535,1/Y/2607:2609	NA	NA
109	IL_7ASP_110 ➜	1/Y/2537:2539,1/Y/2601:2605	NA	NA
110	IL_7ASP_111 ➜	1/Y/2539:2540,1/Y/2598:2601	NA	NA
111	IL_7ASP_112 ➜	1/Y/2548:2550,1/Y/2567:2571	NA	NA
112	IL_7ASP_113 ➜	1/Y/2618:2619,1/Y/2628:2630	NA	NA
113	IL_7ASP_114 ➜	1/Y/2661:2667,1/Y/2801:2811	NA	NA
114	IL_7ASP_115 ➜	1/Y/2707:2711,1/Y/2752:2754	NA	NA
115	IL_7ASP_116 ➜	1/Y/2714:2719,1/Y/2744:2749	NA	NA
116	IL_7ASP_117 ➜	1/Y/2722:2723,1/Y/2738:2741	NA	NA
117	IL_7ASP_118 ➜	1/Y/2763:2764,1/Y/2794:2796	NA	NA
118	IL_7ASP_119 ➜	1/Y/2764:2770,1/Y/2788:2794	NA	NA
119	IL_7ASP_120 ➜	1/Y/2858:2859,1/Y/2898:2900	NA	NA
120	IL_7ASP_121 ➜	1/Y/2863:2865,1/Y/2891:2894	NA	NA
121	IL_7ASP_122 ➜	1/Y/2867:2872,1/Y/2885:2889	NA	NA

Problematic loops

#	loop id	Problem	Sequence
1	IL_7ASP_074 ➜	missing nts	NA

Valid loops

#	loop id	location	annotation	motif
1	J3_7ASP_002 ➜	1/X/952:961,1/X/1241:1248,1/X/1348:1352	NA	NA
2	J3_7ASP_003 ➜	1/X/1075:1081,1/X/1118:1125,1/X/1198:1204	NA	NA
3	J3_7ASP_004 ➜	1/X/1248:1252,1/X/1307:1314,1/X/1345:1348	NA	NA
4	J3_7ASP_005 ➜	1/Y/56:67,1/Y/74:76,1/Y/109:113	NA	NA
5	J3_7ASP_006 ➜	1/Y/272:276,1/Y/294:302,1/Y/415:416	NA	NA
6	J3_7ASP_007 ➜	1/Y/728:734,1/Y/818:823,1/Y/831:839	NA	NA
7	J3_7ASP_008 ➜	1/Y/742:745,1/Y/777:781,1/Y/805:810	NA	NA
8	J3_7ASP_009 ➜	1/Y/1335:1340,1/Y/1669:1671,1/Y/1683:1686	NA	NA
9	J3_7ASP_010 ➜	1/Y/1343:1346,1/Y/1649:1655,1/Y/1664:1666	NA	NA
10	J3_7ASP_011 ➜	1/Y/1381:1386,1/Y/1419:1422,1/Y/1439:1440	NA	NA
11	J3_7ASP_012 ➜	1/Y/1860:1863,1/Y/1931:1960,1/Y/1994:1999	NA	NA
12	J3_7ASP_013 ➜	1/Y/2118:2120,1/Y/2223:2228,1/Y/2249:2255	NA	NA
13	J3_7ASP_014 ➜	1/Y/2309:2312,1/Y/2410:2423,1/Y/2447:2454	NA	NA
14	J3_7ASP_016 ➜	1/Y/2544:2547,1/Y/2572:2574,1/Y/2588:2594	NA	NA
15	J3_7ASP_017 ➜	1/Y/2834:2835,1/Y/2851:2856,1/Y/2902:2906	NA	NA

Problematic loops

#	loop id	Problem	Sequence
1	J3_7ASP_001 ➜	missing nts	NA
2	J3_7ASP_015 ➜	missing nts	NA

Coloring options: Nucleotide numbers

7ASP Internal, Hairpin and 3-way Junction Loop Motifs

Valid loops

Problematic loops

Valid loops

Problematic loops

Valid loops

Problematic loops