7U2J Internal, Hairpin and 3-way Junction Loop Motifs
Valid loops
| # | loop id | location | annotation (mapped to, source) | motif group (similar to) |
|---|---|---|---|---|
| 1/1A/59:68 | NA | NA | ||
| 1/1A/87:95 | NA | NA | ||
| 1/1A/123:128 | NA | NA | ||
| 1/1A/139:142A | NA | NA | ||
| 1/1A/194:201 | NA | NA | ||
| 1/1A/225:230 | NA | NA | ||
| 1/1A/246:252 | NA | NA | ||
| 1/1A/271J:271M | NA | NA | ||
| 1/1A/305:312 | NA | NA | ||
| 1/1A/319:323 | NA | NA | ||
| 1/1A/327:335 | NA | NA | ||
| 1/1A/382:392 | NA | NA | ||
| 1/1A/410:417 | NA | NA | ||
| 1/1A/462:467 | NA | NA | ||
| 1/1A/487:493 | NA | NA | ||
| 1/1A/566:575 | NA | NA | ||
| 1/1A/612:615 | NA | NA | ||
| 1/1A/629:634 | NA | NA | ||
| 1/1A/641:647 | NA | NA | ||
| 1/1A/712:719 | NA | NA | ||
| 1/1A/744:753 | NA | NA | ||
| 1/1A/779:785 | NA | NA | ||
| 1/1A/826:831 | NA | NA | ||
| 1/1A/955:962 | NA | NA | ||
| 1/1A/978:985 | NA | NA | ||
| 1/1A/1171:1178 | NA | NA | ||
| 1/1A/1222:1227 | NA | NA | ||
| 1/1A/1281:1289 | NA | NA | ||
| 1/1A/1324:1330 | NA | NA | ||
| 1/1A/1363:1368 | NA | NA | ||
| 1/1A/1389:1398 | NA | NA | ||
| 1/1A/1451:1459 | NA | NA | ||
| 1/1A/1492:1498 | NA | NA | ||
| 1/1A/1565:1568 | NA | NA | ||
| 1/1A/1612:1619 | NA | NA | ||
| 1/1A/1631:1635 | NA | NA | ||
| 1/1A/1691:1696 | NA | NA | ||
| 1/1A/1720:1742 | NA | NA | ||
| 1/1A/1752:1756 | NA | NA | ||
| 1/1A/1777:1787 | NA | NA | ||
| 1/1A/1806:1811 | NA | NA | ||
| 1/1A/1864:1878 | NA | NA | ||
| 1/1A/1909:1921 | NA | NA | ||
| 1/1A/1949:1957 | NA | NA | ||
| 1/1A/2027:2036 | NA | NA | ||
| 1/1A/2205:2219 | NA | NA | ||
| 1/1A/2248:2256 | NA | NA | ||
| 1/1A/2264:2276 | NA | NA | ||
| 1/1A/2303:2313 | NA | NA | ||
| 1/1A/2324:2331 | NA | NA | ||
| 1/1A/2355:2362 | NA | NA | ||
| 1/1A/2374:2379 | NA | NA | ||
| 1/1A/2404:2413 | NA | NA | ||
| 1/1A/2471:2479 | NA | NA | ||
| 1/1A/2528:2535 | NA | NA | ||
| 1/1A/2551:2557 | NA | NA | ||
| 1/1A/2594:2599 | NA | NA | ||
| 1/1A/2658:2663 | NA | NA | ||
| 1/1A/2701:2706 | NA | NA | ||
| 1/1A/2745:2759 | NA | NA | ||
| 1/1A/2819:2827 | NA | NA | ||
| 1/1A/2856:2861 | NA | NA | ||
| 1/1B/38:44 | NA | NA | ||
| 1/1B/86:91 | NA | NA | ||
| 1/1a/12:22 | NA | NA | ||
| 1/1a/158:163 | NA | NA | ||
| 1/1a/189C:189H | NA | NA | ||
| 1/1a/201:216 | NA | NA | ||
| 1/1a/259:267 | NA | NA | ||
| 1/1a/296:301 | NA | NA | ||
| 1/1a/320:333 | NA | NA | ||
| 1/1a/379:384 | NA | NA | ||
| 1/1a/419:424 | NA | NA | ||
| 1/1a/458:473 | NA | NA | ||
| 1/1a/521:528 | NA | NA | ||
| 1/1a/617:623 | NA | NA | ||
| 1/1a/689:698 | NA | NA | ||
| 1/1a/726:731 | NA | NA | ||
| 1/1a/786:796 | NA | NA | ||
| 1/1a/838:848 | NA | NA | ||
| 1/1a/862:867 | NA | NA | ||
| 1/1a/897:902 | NA | NA | ||
| 1/1a/963:972 | NA | NA | ||
| 1/1a/1012:1017 | NA | NA | ||
| 1/1a/1076:1081 | NA | NA | ||
| 1/1a/1089:1096 | NA | NA | ||
| 1/1a/1134:1140 | NA | NA | ||
| 1/1a/1165:1171 | NA | NA | ||
| 1/1a/1265:1270 | NA | NA | ||
| 1/1a/1314:1323 | NA | NA | ||
| 1/1a/1356:1366 | NA | NA | ||
| 1/1a/1445:1457 | NA | NA | ||
| 1/1a/1515:1520 | NA | NA | ||
| 1/1w/31:39 | NA | NA | ||
| 1/1w/53:61 | NA | NA | ||
| 1/1x/13:22 | NA | NA | ||
| 1/1x/31:39 | NA | NA | ||
| 1/1x/53:61 | NA | NA | ||
| 1/1y/53:61 | NA | NA | ||
| 1/2A/59:68 | NA | NA | ||
| 1/2A/87:95 | NA | NA | ||
| 1/2A/123:128 | NA | NA | ||
| 1/2A/139:142A | NA | NA | ||
| 1/2A/194:201 | NA | NA | ||
| 1/2A/225:230 | NA | NA | ||
| 1/2A/246:252 | NA | NA | ||
| 1/2A/271I:271O | NA | NA | ||
| 1/2A/305:312 | NA | NA | ||
| 1/2A/319:323 | NA | NA | ||
| 1/2A/327:335 | NA | NA | ||
| 1/2A/382:392 | NA | NA | ||
| 1/2A/410:417 | NA | NA | ||
| 1/2A/462:467 | NA | NA | ||
| 1/2A/487:493 | NA | NA | ||
| 1/2A/566:575 | NA | NA | ||
| 1/2A/612:615 | NA | NA | ||
| 1/2A/629:634 | NA | NA | ||
| 1/2A/641:647 | NA | NA | ||
| 1/2A/712:719 | NA | NA | ||
| 1/2A/744:753 | NA | NA | ||
| 1/2A/779:785 | NA | NA | ||
| 1/2A/826:831 | NA | NA | ||
| 1/2A/881:895 | NA | NA | ||
| 1/2A/955:962 | NA | NA | ||
| 1/2A/978:985 | NA | NA | ||
| 1/2A/1222:1227 | NA | NA | ||
| 1/2A/1281:1289 | NA | NA | ||
| 1/2A/1324:1330 | NA | NA | ||
| 1/2A/1363:1368 | NA | NA | ||
| 1/2A/1389:1398 | NA | NA | ||
| 1/2A/1451:1459 | NA | NA | ||
| 1/2A/1492:1498 | NA | NA | ||
| 1/2A/1565:1568 | NA | NA | ||
| 1/2A/1612:1619 | NA | NA | ||
| 1/2A/1631:1635 | NA | NA | ||
| 1/2A/1691:1696 | NA | NA | ||
| 1/2A/1720:1742 | NA | NA | ||
| 1/2A/1752:1756 | NA | NA | ||
| 1/2A/1777:1787 | NA | NA | ||
| 1/2A/1806:1811 | NA | NA | ||
| 1/2A/1864:1878 | NA | NA | ||
| 1/2A/1909:1921 | NA | NA | ||
| 1/2A/1949:1957 | NA | NA | ||
| 1/2A/2027:2036 | NA | NA | ||
| 1/2A/2205:2219 | NA | NA | ||
| 1/2A/2248:2256 | NA | NA | ||
| 1/2A/2264:2276 | NA | NA | ||
| 1/2A/2303:2313 | NA | NA | ||
| 1/2A/2324:2331 | NA | NA | ||
| 1/2A/2355:2362 | NA | NA | ||
| 1/2A/2374:2379 | NA | NA | ||
| 1/2A/2404:2413 | NA | NA | ||
| 1/2A/2471:2479 | NA | NA | ||
| 1/2A/2527:2536 | NA | NA | ||
| 1/2A/2551:2557 | NA | NA | ||
| 1/2A/2594:2599 | NA | NA | ||
| 1/2A/2658:2663 | NA | NA | ||
| 1/2A/2701:2706 | NA | NA | ||
| 1/2A/2745:2759 | NA | NA | ||
| 1/2A/2819:2827 | NA | NA | ||
| 1/2A/2856:2861 | NA | NA | ||
| 1/2B/38:44 | geometric HL_7RQB_070 | NA HL_02733.5* | ||
| 1/2B/86:91 | geometric HL_7RQB_071 | NA HL_43074.18* | ||
| 1/2a/12:22 | NA | NA | ||
| 1/2a/158:163 | NA | NA | ||
| 1/2a/189C:189H | NA | NA | ||
| 1/2a/201:216 | NA | NA | ||
| 1/2a/259:267 | NA | NA | ||
| 1/2a/296:301 | NA | NA | ||
| 1/2a/320:333 | NA | NA | ||
| 1/2a/342:347 | NA | NA | ||
| 1/2a/379:384 | NA | NA | ||
| 1/2a/419:424 | NA | NA | ||
| 1/2a/458:473 | NA | NA | ||
| 1/2a/521:528 | NA | NA | ||
| 1/2a/617:623 | NA | NA | ||
| 1/2a/689:698 | NA | NA | ||
| 1/2a/726:731 | NA | NA | ||
| 1/2a/786:796 | NA | NA | ||
| 1/2a/838:848 | NA | NA | ||
| 1/2a/862:867 | NA | NA | ||
| 1/2a/897:902 | NA | NA | ||
| 1/2a/963:972 | NA | NA | ||
| 1/2a/1076:1081 | NA | NA | ||
| 1/2a/1089:1096 | NA | NA | ||
| 1/2a/1134:1140 | NA | NA | ||
| 1/2a/1165:1171 | NA | NA | ||
| 1/2a/1265:1270 | NA | NA | ||
| 1/2a/1314:1323 | NA | NA | ||
| 1/2a/1356:1366 | NA | NA | ||
| 1/2a/1445:1457 | NA | NA | ||
| 1/2a/1515:1520 | NA | NA | ||
| 1/2w/31:39 | NA | NA | ||
| 1/2w/53:61 | NA | NA | ||
| 1/2x/13:22 | NA | NA | ||
| 1/2x/31:39 | NA | NA | ||
| 1/2x/53:61 | NA | NA | ||
| 1/2y/53:61 | NA | NA |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_7U2J_016 | NA | ||
| HL_7U2J_025 | NA | ||
| HL_7U2J_028 | NA | ||
| HL_7U2J_029 | NA | ||
| HL_7U2J_050 | NA | ||
| HL_7U2J_066 | NA | ||
| HL_7U2J_072 | NA | ||
| HL_7U2J_079 | NA | ||
| HL_7U2J_093 | NA | ||
| HL_7U2J_103 | NA | ||
| HL_7U2J_109 | NA | ||
| HL_7U2J_110 | NA | ||
| HL_7U2J_116 | NA | ||
| HL_7U2J_128 | NA | ||
| HL_7U2J_140 | NA | ||
| HL_7U2J_148 | NA | ||
| HL_7U2J_161 | NA | ||
| HL_7U2J_177 | NA | ||
| HL_7U2J_183 | NA | ||
| HL_7U2J_203 | NA | ||
| HL_7U2J_204 | NA | ||
| HL_7U2J_214 | NA | ||
| HL_7U2J_220 | NA | ||
| HL_7U2J_221 | NA |
Valid loops
| # | loop id | location | annotation (mapped to, source) | motif group (similar to) |
|---|---|---|---|---|
| 1/1A/24:30, 1/1A/510:516 | NA | NA | ||
| 1/1A/36:37, 1/1A/442:444 | NA | NA | ||
| 1/1A/42:43, 1/1A/434:436 | NA | NA | ||
| 1/1A/81:85, 1/1A/97:105 | NA | NA | ||
| 1/1A/183:184, 1/1A/212:214 | NA | NA | ||
| 1/1A/188:194, 1/1A/201:208 | NA | NA | ||
| 1/1A/239:245, 1/1A/253:258 | NA | NA | ||
| 1/1A/271I:271J, 1/1A/271M:271O | NA | NA | ||
| 1/1A/272D:272E, 1/1A/363E:364 | NA | NA | ||
| 1/1A/280:284, 1/1A/357:360 | NA | NA | ||
| 1/1A/288:290, 1/1A/350:353 | NA | NA | ||
| 1/1A/293:295, 1/1A/343:347 | NA | NA | ||
| 1/1A/481:484, 1/1A/496:509 | NA | NA | ||
| 1/1A/564:566, 1/1A/575:577 | NA | NA | ||
| 1/1A/606:610, 1/1A/618:622 | NA | NA | ||
| 1/1A/672:674, 1/1A/806:808 | NA | NA | ||
| 1/1A/674:678, 1/1A/799:806 | NA | NA | ||
| 1/1A/697:698, 1/1A/763:765 | NA | NA | ||
| 1/1A/702:703, 1/1A/728:730 | NA | NA | ||
| 1/1A/703:707, 1/1A/724:728 | NA | NA | ||
| 1/1A/738:741, 1/1A/756:758 | NA | NA | ||
| 1/1A/775:777, 1/1A/787:791 | NA | NA | ||
| 1/1A/837:838, 1/1A/940:942 | NA | NA | ||
| 1/1A/844:846, 1/1A/931:934 | NA | NA | ||
| 1/1A/846:850, 1/1A/927:931 | NA | NA | ||
| 1/1A/858:862, 1/1A/915:919 | NA | NA | ||
| 1/1A/862:863, 1/1A/913:915 | NA | NA | ||
| 1/1A/864:868, 1/1A/909:912 | NA | NA | ||
| 1/1A/870:872, 1/1A/905:907 | NA | NA | ||
| 1/1A/875:880, 1/1A/898:902 | NA | NA | ||
| 1/1A/880:881, 1/1A/895:898 | NA | NA | ||
| 1/1A/952:954, 1/1A/963:965 | NA | NA | ||
| 1/1A/994:996, 1/1A/1159:1160 | NA | NA | ||
| 1/1A/998:1002, 1/1A/1153:1157 | NA | NA | ||
| 1/1A/1004:1011, 1/1A/1150:1151 | NA | NA | ||
| 1/1A/1011:1013, 1/1A/1149:1150 | NA | NA | ||
| 1/1A/1018:1024, 1/1A/1140:1144 | NA | NA | ||
| 1/1A/1024:1030, 1/1A/1124:1140 | NA | NA | ||
| 1/1A/1031:1034, 1/1A/1121:1123 | NA | NA | ||
| 1/1A/1043:1051, 1/1A/1108:1112 | NA | NA | ||
| 1/1A/1196:1198, 1/1A/1247:1250 | NA | NA | ||
| 1/1A/1202:1206, 1/1A/1240:1243 | NA | NA | ||
| 1/1A/1208:1215, 1/1A/1234:1238 | NA | NA | ||
| 1/1A/1219:1221, 1/1A/1229:1230 | NA | NA | ||
| 1/1A/1262:1269, 1/1A/2011:2017 | NA | NA | ||
| 1/1A/1310:1313, 1/1A/1603:1604 | NA | NA | ||
| 1/1A/1319:1324, 1/1A/1330:1333 | NA | NA | ||
| 1/1A/1351:1355, 1/1A/1376:1380 | NA | NA | ||
| 1/1A/1357:1361, 1/1A/1370:1374 | NA | NA | ||
| 1/1A/1415:1416, 1/1A/1582:1587 | NA | NA | ||
| 1/1A/1417:1421, 1/1A/1577:1581 | NA | NA | ||
| 1/1A/1433:1435, 1/1A/1557:1560 | NA | NA | ||
| 1/1A/1437:1440, 1/1A/1551:1555 | NA | NA | ||
| 1/1A/1448:1450, 1/1A/1462:1463 | NA | NA | ||
| 1/1A/1450A:1451, 1/1A/1459:1461 | NA | NA | ||
| 1/1A/1469:1473, 1/1A/1518:1523 | NA | NA | ||
| 1/1A/1481:1482, 1/1A/1506:1510 | NA | NA | ||
| 1/1A/1489:1491, 1/1A/1499:1500 | NA | NA | ||
| 1/1A/1526:1529, 1/1A/1540:1546 | NA | NA | ||
| 1/1A/1651:1656, 1/1A/2004:2006 | NA | NA | ||
| 1/1A/1663:1665, 1/1A/1995:1997 | NA | NA | ||
| 1/1A/1666:1669, 1/1A/1993:1994 | NA | NA | ||
| 1/1A/1669:1674, 1/1A/1990:1993 | NA | NA | ||
| 1/1A/1686:1691, 1/1A/1696:1702 | NA | NA | ||
| 1/1A/1770:1771, 1/1A/1980:1982 | NA | NA | ||
| 1/1A/1798:1804, 1/1A/1813:1821 | NA | NA | ||
| 1/1A/1837:1840, 1/1A/1902:1903 | NA | NA | ||
| 1/1A/1841:1842, 1/1A/1898:1901 | NA | NA | ||
| 1/1A/1846:1849, 1/1A/1893:1894 | NA | NA | ||
| 1/1A/1851:1855, 1/1A/1887:1891 | NA | NA | ||
| 1/1A/1856:1860, 1/1A/1882:1886 | NA | NA | ||
| 1/1A/1933:1934, 1/1A/1964:1967 | NA | NA | ||
| 1/1A/1934:1945, 1/1A/1961:1964 | NA | NA | ||
| 1/1A/2050:2052, 1/1A/2617:2618 | NA | NA | ||
| 1/1A/2054:2057, 1/1A/2611:2615 | NA | NA | ||
| 1/1A/2067:2069, 1/1A/2442:2443 | NA | NA | ||
| 1/1A/2070:2071, 1/1A/2438:2441 | NA | NA | ||
| 1/1A/2081:2083, 1/1A/2236:2239 | NA | NA | ||
| 1/1A/2085:2087, 1/1A/2232:2234 | NA | NA | ||
| 1/1A/2297:2299, 1/1A/2317:2321 | NA | NA | ||
| 1/1A/2350:2353, 1/1A/2364:2367 | NA | NA | ||
| 1/1A/2401:2403, 1/1A/2414:2415 | NA | NA | ||
| 1/1A/2453:2454, 1/1A/2498:2500 | NA | NA | ||
| 1/1A/2454:2455, 1/1A/2496:2498 | NA | NA | ||
| 1/1A/2456:2459, 1/1A/2493:2495 | NA | NA | ||
| 1/1A/2459:2461, 1/1A/2489:2493 | NA | NA | ||
| 1/1A/2466:2470, 1/1A/2480:2484 | NA | NA | ||
| 1/1A/2507:2508, 1/1A/2580:2582 | NA | NA | ||
| 1/1A/2510:2512, 1/1A/2574:2578 | NA | NA | ||
| 1/1A/2512:2513, 1/1A/2571:2574 | NA | NA | ||
| 1/1A/2522:2523, 1/1A/2540:2543 | NA | NA | ||
| 1/1A/2588:2590, 1/1A/2604:2606 | NA | NA | ||
| 1/1A/2591:2592, 1/1A/2601:2603 | NA | NA | ||
| 1/1A/2636:2640, 1/1A/2774:2782 | NA | NA | ||
| 1/1A/2652:2658, 1/1A/2663:2668 | NA | NA | ||
| 1/1A/2680:2684, 1/1A/2725:2727 | NA | NA | ||
| 1/1A/2687:2691, 1/1A/2718:2722 | NA | NA | ||
| 1/1A/2695:2696, 1/1A/2711:2714 | NA | NA | ||
| 1/1A/2737:2742, 1/1A/2762:2767 | NA | NA | ||
| 1/1A/2838:2839, 1/1A/2878:2880 | NA | NA | ||
| 1/1A/2843:2846, 1/1A/2870:2874 | NA | NA | ||
| 1/1A/2847:2852, 1/1A/2865:2869 | NA | NA | ||
| 1/1B/17:18, 1/1B/65:67 | NA | NA | ||
| 1/1B/23:28, 1/1B/56:60 | NA | NA | ||
| 1/1B/30:31, 1/1B/51:54 | NA | NA | ||
| 1/1B/34:38, 1/1B/44:48 | NA | NA | ||
| 1/1B/71:79, 1/1B/98:106 | NA | NA | ||
| 1/1a/30:32, 1/1a/552:553 | NA | NA | ||
| 1/1a/44:45, 1/1a/396:398 | NA | NA | ||
| 1/1a/47:52, 1/1a/359:361 | NA | NA | ||
| 1/1a/54:56, 1/1a/356:357 | NA | NA | ||
| 1/1a/63:66, 1/1a/103:104 | NA | NA | ||
| 1/1a/67:69, 1/1a/100:102 | NA | NA | ||
| 1/1a/129:131, 1/1a/231:232 | NA | NA | ||
| 1/1a/132:136, 1/1a/227:230 | NA | NA | ||
| 1/1a/148:153, 1/1a/168:174 | NA | NA | ||
| 1/1a/186:189, 1/1a/189K:191 | NA | NA | ||
| 1/1a/242:247, 1/1a/277:284 | NA | NA | ||
| 1/1a/249:252, 1/1a/274:275 | NA | NA | ||
| 1/1a/292:293, 1/1a/304:308 | NA | NA | ||
| 1/1a/367:369, 1/1a/392:393 | NA | NA | ||
| 1/1a/371:375, 1/1a/389:390 | NA | NA | ||
| 1/1a/375:376, 1/1a/387:389 | NA | NA | ||
| 1/1a/409:416, 1/1a/427:433 | NA | NA | ||
| 1/1a/446:450, 1/1a/483:488 | NA | NA | ||
| 1/1a/450:455, 1/1a/476:483 | NA | NA | ||
| 1/1a/504:511, 1/1a/540:541 | NA | NA | ||
| 1/1a/515:521, 1/1a/528:536 | NA | NA | ||
| 1/1a/569:575, 1/1a/880:881 | NA | NA | ||
| 1/1a/580:584, 1/1a/757:761 | NA | NA | ||
| 1/1a/594:596, 1/1a/644:645 | NA | NA | ||
| 1/1a/597:598, 1/1a/640:643 | NA | NA | ||
| 1/1a/605:612, 1/1a/628:633 | NA | NA | ||
| 1/1a/654:655, 1/1a/751:754 | NA | NA | ||
| 1/1a/657:658, 1/1a/747:749 | NA | NA | ||
| 1/1a/662:666, 1/1a/740:743 | NA | NA | ||
| 1/1a/673:678, 1/1a/712:717 | NA | NA | ||
| 1/1a/683:688, 1/1a/699:707 | NA | NA | ||
| 1/1a/774:778, 1/1a/804:805 | NA | NA | ||
| 1/1a/779:783, 1/1a/799:803 | NA | NA | ||
| 1/1a/887:894, 1/1a/905:910 | NA | NA | ||
| 1/1a/922:923, 1/1a/1393:1395 | NA | NA | ||
| 1/1a/925:927, 1/1a/1390:1391 | NA | NA | ||
| 1/1a/933:935, 1/1a/1380:1384 | NA | NA | ||
| 1/1a/953:954, 1/1a/1226:1228 | NA | NA | ||
| 1/1a/993:997, 1/1a/1044:1045 | NA | NA | ||
| 1/1a/1048:1050, 1/1a/1208:1209 | NA | NA | ||
| 1/1a/1050:1052, 1/1a/1206:1208 | NA | NA | ||
| 1/1a/1052:1056, 1/1a/1204:1206 | NA | NA | ||
| 1/1a/1057:1058, 1/1a/1199:1203 | NA | NA | ||
| 1/1a/1060:1061, 1/1a/1195:1197 | NA | NA | ||
| 1/1a/1061:1063, 1/1a/1193:1195 | NA | NA | ||
| 1/1a/1124:1127, 1/1a/1145:1149 | NA | NA | ||
| 1/1a/1129:1132, 1/1a/1142:1143 | NA | NA | ||
| 1/1a/1158:1161, 1/1a/1175:1181 | NA | NA | ||
| 1/1a/1247:1253, 1/1a/1284:1290 | NA | NA | ||
| 1/1a/1255:1258, 1/1a/1277:1282 | NA | NA | ||
| 1/1a/1259:1260, 1/1a/1274:1276 | NA | NA | ||
| 1/1a/1260:1262, 1/1a/1273:1274 | NA | NA | ||
| 1/1a/1303:1308, 1/1a/1329:1334 | NA | NA | ||
| 1/1a/1399:1401, 1/1a/1501:1504 | NA | NA | ||
| 1/1a/1401:1405, 1/1a/1496:1501 | NA | NA | ||
| 1/1a/1405:1409, 1/1a/1491:1496 | NA | NA | ||
| 1/1a/1412:1414, 1/1a/1486:1488 | NA | NA | ||
| 1/1a/1416:1419, 1/1a/1481:1484 | NA | NA | ||
| 1/1a/1431:1435, 1/1a/1466:1469 | NA | NA | ||
| 1/1a/1435:1437, 1/1a/1464:1466 | NA | NA | ||
| 1/1a/1440:1443, 1/1a/1459:1461 | NA | NA | ||
| 1/2A/24:30, 1/2A/510:516 | NA | NA | ||
| 1/2A/36:37, 1/2A/442:444 | NA | NA | ||
| 1/2A/42:44, 1/2A/433:436 | NA | NA | ||
| 1/2A/81:85, 1/2A/97:105 | NA | NA | ||
| 1/2A/183:184, 1/2A/212:214 | NA | NA | ||
| 1/2A/188:194, 1/2A/201:208 | NA | NA | ||
| 1/2A/239:245, 1/2A/253:258 | NA | NA | ||
| 1/2A/272D:272E, 1/2A/363E:364 | NA | NA | ||
| 1/2A/272J:279, 1/2A/361:363 | NA | NA | ||
| 1/2A/280:284, 1/2A/357:360 | NA | NA | ||
| 1/2A/288:290, 1/2A/350:353 | NA | NA | ||
| 1/2A/293:295, 1/2A/343:347 | NA | NA | ||
| 1/2A/481:484, 1/2A/496:509 | NA | NA | ||
| 1/2A/564:566, 1/2A/575:577 | NA | NA | ||
| 1/2A/606:610, 1/2A/618:622 | NA | NA | ||
| 1/2A/672:674, 1/2A/806:808 | NA | NA | ||
| 1/2A/674:678, 1/2A/799:806 | NA | NA | ||
| 1/2A/697:698, 1/2A/763:765 | NA | NA | ||
| 1/2A/702:703, 1/2A/728:730 | NA | NA | ||
| 1/2A/703:707, 1/2A/724:728 | NA | NA | ||
| 1/2A/738:741, 1/2A/756:758 | NA | NA | ||
| 1/2A/775:777, 1/2A/787:791 | NA | NA | ||
| 1/2A/837:838, 1/2A/940:942 | NA | NA | ||
| 1/2A/844:846, 1/2A/931:934 | NA | NA | ||
| 1/2A/846:850, 1/2A/927:931 | NA | NA | ||
| 1/2A/858:862, 1/2A/915:919 | NA | NA | ||
| 1/2A/862:863, 1/2A/913:915 | NA | NA | ||
| 1/2A/864:868, 1/2A/909:912 | NA | NA | ||
| 1/2A/870:872, 1/2A/905:907 | NA | NA | ||
| 1/2A/875:880, 1/2A/897:902 | NA | NA | ||
| 1/2A/880:881, 1/2A/895:897 | NA | NA | ||
| 1/2A/952:954, 1/2A/963:965 | NA | NA | ||
| 1/2A/994:996, 1/2A/1159:1160 | NA | NA | ||
| 1/2A/998:1002, 1/2A/1153:1157 | NA | NA | ||
| 1/2A/1004:1011, 1/2A/1150:1151 | NA | NA | ||
| 1/2A/1011:1013, 1/2A/1149:1150 | NA | NA | ||
| 1/2A/1018:1024, 1/2A/1140:1144 | NA | NA | ||
| 1/2A/1024:1030, 1/2A/1124:1140 | NA | NA | ||
| 1/2A/1031:1034, 1/2A/1121:1123 | NA | NA | ||
| 1/2A/1196:1198, 1/2A/1247:1250 | NA | NA | ||
| 1/2A/1202:1206, 1/2A/1240:1243 | NA | NA | ||
| 1/2A/1208:1215, 1/2A/1234:1238 | NA | NA | ||
| 1/2A/1219:1221, 1/2A/1229:1230 | NA | NA | ||
| 1/2A/1262:1269, 1/2A/2011:2017 | NA | NA | ||
| 1/2A/1310:1313, 1/2A/1603:1604 | NA | NA | ||
| 1/2A/1319:1323, 1/2A/1331:1333 | NA | NA | ||
| 1/2A/1351:1355, 1/2A/1376:1380 | NA | NA | ||
| 1/2A/1357:1361, 1/2A/1370:1374 | NA | NA | ||
| 1/2A/1415:1416, 1/2A/1582:1587 | NA | NA | ||
| 1/2A/1417:1421, 1/2A/1577:1581 | NA | NA | ||
| 1/2A/1433:1435, 1/2A/1557:1560 | NA | NA | ||
| 1/2A/1437:1440, 1/2A/1551:1555 | NA | NA | ||
| 1/2A/1448:1450, 1/2A/1462:1463 | NA | NA | ||
| 1/2A/1450A:1451, 1/2A/1459:1461 | NA | NA | ||
| 1/2A/1469:1473, 1/2A/1518:1523 | NA | NA | ||
| 1/2A/1481:1482, 1/2A/1506:1510 | NA | NA | ||
| 1/2A/1489:1491, 1/2A/1499:1500 | NA | NA | ||
| 1/2A/1526:1529, 1/2A/1540:1546 | NA | NA | ||
| 1/2A/1651:1656, 1/2A/2004:2006 | NA | NA | ||
| 1/2A/1663:1665, 1/2A/1995:1997 | NA | NA | ||
| 1/2A/1666:1669, 1/2A/1993:1994 | NA | NA | ||
| 1/2A/1669:1674, 1/2A/1990:1993 | NA | NA | ||
| 1/2A/1686:1691, 1/2A/1696:1702 | NA | NA | ||
| 1/2A/1770:1771, 1/2A/1980:1982 | NA | NA | ||
| 1/2A/1798:1804, 1/2A/1813:1821 | NA | NA | ||
| 1/2A/1837:1840, 1/2A/1902:1903 | NA | NA | ||
| 1/2A/1841:1842, 1/2A/1898:1901 | NA | NA | ||
| 1/2A/1846:1849, 1/2A/1893:1894 | NA | NA | ||
| 1/2A/1851:1855, 1/2A/1887:1891 | NA | NA | ||
| 1/2A/1856:1860, 1/2A/1882:1886 | NA | NA | ||
| 1/2A/1933:1934, 1/2A/1964:1967 | NA | NA | ||
| 1/2A/1934:1945, 1/2A/1961:1964 | NA | NA | ||
| 1/2A/2050:2052, 1/2A/2617:2618 | NA | NA | ||
| 1/2A/2054:2057, 1/2A/2611:2615 | NA | NA | ||
| 1/2A/2067:2069, 1/2A/2442:2443 | NA | NA | ||
| 1/2A/2070:2071, 1/2A/2438:2441 | NA | NA | ||
| 1/2A/2081:2083, 1/2A/2236:2239 | NA | NA | ||
| 1/2A/2085:2087, 1/2A/2232:2234 | NA | NA | ||
| 1/2A/2350:2353, 1/2A/2364:2367 | NA | NA | ||
| 1/2A/2401:2403, 1/2A/2414:2415 | NA | NA | ||
| 1/2A/2453:2454, 1/2A/2498:2500 | NA | NA | ||
| 1/2A/2454:2455, 1/2A/2496:2498 | NA | NA | ||
| 1/2A/2457:2459, 1/2A/2493:2494 | NA | NA | ||
| 1/2A/2459:2461, 1/2A/2489:2493 | NA | NA | ||
| 1/2A/2466:2470, 1/2A/2480:2484 | NA | NA | ||
| 1/2A/2507:2508, 1/2A/2580:2582 | NA | NA | ||
| 1/2A/2510:2512, 1/2A/2574:2578 | NA | NA | ||
| 1/2A/2512:2513, 1/2A/2571:2574 | NA | NA | ||
| 1/2A/2522:2523, 1/2A/2540:2543 | NA | NA | ||
| 1/2A/2588:2590, 1/2A/2604:2606 | NA | NA | ||
| 1/2A/2591:2592, 1/2A/2601:2603 | NA | NA | ||
| 1/2A/2636:2640, 1/2A/2774:2782 | NA | NA | ||
| 1/2A/2652:2658, 1/2A/2663:2668 | NA | NA | ||
| 1/2A/2680:2684, 1/2A/2725:2727 | NA | NA | ||
| 1/2A/2687:2691, 1/2A/2718:2722 | NA | NA | ||
| 1/2A/2695:2696, 1/2A/2711:2714 | NA | NA | ||
| 1/2A/2737:2742, 1/2A/2762:2767 | NA | NA | ||
| 1/2A/2838:2839, 1/2A/2878:2880 | NA | NA | ||
| 1/2A/2843:2846, 1/2A/2870:2874 | NA | NA | ||
| 1/2A/2847:2852, 1/2A/2865:2869 | NA | NA | ||
| 1/2B/17:18, 1/2B/65:67 | Major groove intercalation geometric IL_7RQB_111 | NA IL_80007.16* | ||
| 1/2B/23:28, 1/2B/56:60 | geometric IL_5J7L_356 | NA IL_18472.1* | ||
| 1/2B/30:32, 1/2B/50:54 | geometric IL_4WF9_114 | NA IL_45289.1* | ||
| 1/2B/34:38, 1/2B/44:48 | Symmetric double minor groove platform geometric IL_7RQB_114 | NA IL_58103.5* | ||
| 1/2B/71:79, 1/2B/98:106 | Bacterial 5S Loop E geometric IL_7RQB_115 | NA IL_56455.3* | ||
| 1/2a/30:32, 1/2a/552:553 | NA | NA | ||
| 1/2a/44:45, 1/2a/396:398 | NA | NA | ||
| 1/2a/47:52, 1/2a/359:361 | NA | NA | ||
| 1/2a/54:56, 1/2a/356:357 | NA | NA | ||
| 1/2a/63:66, 1/2a/103:104 | NA | NA | ||
| 1/2a/67:69, 1/2a/100:102 | NA | NA | ||
| 1/2a/129:131, 1/2a/231:232 | NA | NA | ||
| 1/2a/132:136, 1/2a/227:230 | NA | NA | ||
| 1/2a/148:153, 1/2a/168:174 | NA | NA | ||
| 1/2a/186:188, 1/2a/189L:191 | NA | NA | ||
| 1/2a/242:247, 1/2a/277:284 | NA | NA | ||
| 1/2a/249:252, 1/2a/274:275 | NA | NA | ||
| 1/2a/292:293, 1/2a/304:308 | NA | NA | ||
| 1/2a/367:369, 1/2a/392:393 | NA | NA | ||
| 1/2a/371:375, 1/2a/389:390 | NA | NA | ||