5ZEB Internal, Hairpin and 3-way Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_5ZEB_001 | 1/A/56:65 | No text annotation Not in a motif group | homologous HL_5J7L_134 HL_18177.1 | |
| HL_5ZEB_002 | 1/A/84:93 | No text annotation Not in a motif group | homologous HL_4WF9_002 HL_96598.1 | |
| HL_5ZEB_003 | 1/A/120:125 | No text annotation Not in a motif group | homologous HL_4WF9_003 HL_75407.1 | |
| HL_5ZEB_004 | 1/A/134:141 | No text annotation Not in a motif group | homologous HL_4WF9_004 HL_84085.2 | |
| HL_5ZEB_005 | 1/A/157:167 | No text annotation Not in a motif group | homologous HL_5J7L_138 HL_81820.1 | |
| HL_5ZEB_006 | 1/A/193:200 | No text annotation Not in a motif group | geometric HL_4WF9_006 HL_06192.2 | |
| HL_5ZEB_007 | 1/A/224:230 | No text annotation Not in a motif group | homologous HL_5J7L_140 HL_27930.1 | |
| HL_5ZEB_008 | 1/A/246:252 | No text annotation Not in a motif group | homologous HL_7RQB_008 HL_67216.7 | |
| HL_5ZEB_009 | 1/A/283:303 | No text annotation Not in a motif group | ||
| HL_5ZEB_011 | 1/A/387:394 | No text annotation Not in a motif group | homologous HL_7A0S_010 HL_89380.2 | |
| HL_5ZEB_012 | 1/A/401:405 | No text annotation Not in a motif group | homologous HL_5J7L_143 HL_75407.1 | |
| HL_5ZEB_013 | 1/A/409:417 | No text annotation Not in a motif group | homologous HL_5J7L_144 HL_08002.8 | |
| HL_5ZEB_014 | 1/A/469:481 | No text annotation Not in a motif group | ||
| HL_5ZEB_015 | 1/A/498:505 | No text annotation Not in a motif group | homologous HL_7A0S_014 HL_96598.1 | |
| HL_5ZEB_016 | 1/A/550:555 | GNRA Not in a motif group | homologous HL_4WF9_015 HL_42097.1 | |
| HL_5ZEB_017 | 1/A/575:580 | No text annotation Not in a motif group | homologous HL_7RQB_016 HL_42097.1 | |
| HL_5ZEB_018 | 1/A/658:667 | No text annotation Not in a motif group | geometric HL_7RQB_018 HL_89380.2 | |
| HL_5ZEB_019 | 1/A/705:710 | No text annotation Not in a motif group | geometric HL_4V9F_003 HL_52841.1 | |
| HL_5ZEB_020 | 1/A/723:728 | No text annotation Not in a motif group | homologous HL_7A0S_020 HL_42097.1 | |
| HL_5ZEB_021 | 1/A/735:741 | No text annotation Not in a motif group | homologous HL_7RQB_021 HL_42097.1 | |
| HL_5ZEB_022 | 1/A/755:760 | No text annotation Not in a motif group | geometric HL_2Y9H_003 HL_16173.1 | |
| HL_5ZEB_023 | 1/A/827:834 | No text annotation Not in a motif group | homologous HL_7RQB_022 HL_84085.2 | |
| HL_5ZEB_024 | 1/A/859:868 | No text annotation Not in a motif group | homologous HL_7A0S_022 HL_39334.6 | |
| HL_5ZEB_025 | 1/A/894:900 | No text annotation Not in a motif group | homologous HL_5J7L_156 HL_74322.1 | |
| HL_5ZEB_026 | 1/A/941:946 | No text annotation Not in a motif group | homologous HL_7RQB_025 HL_64365.1 | |
| HL_5ZEB_028 | 1/A/1072:1079 | No text annotation Not in a motif group | homologous HL_7RQB_027 HL_42097.1 | |
| HL_5ZEB_029 | 1/A/1096:1103 | No text annotation Not in a motif group | homologous HL_5J7L_160 HL_64430.2 | |
| HL_5ZEB_030 | 1/A/1182:1192 | No text annotation Not in a motif group | homologous HL_5J7L_161 HL_07145.1 | |
| HL_5ZEB_031 | 1/A/1210:1217 | No text annotation Not in a motif group | homologous HL_6PRV_002 HL_84085.2 | |
| HL_5ZEB_032 | 1/A/1290:1293 | No text annotation Not in a motif group | ||
| HL_5ZEB_033 | 1/A/1336:1341 | No text annotation Not in a motif group | homologous HL_7A0S_031 HL_87030.2 | |
| HL_5ZEB_034 | 1/A/1396:1404 | T-loop with 2 stacked bulged bases Not in a motif group | homologous HL_5J7L_165 HL_89380.2 | |
| HL_5ZEB_035 | 1/A/1439:1445 | No text annotation Not in a motif group | homologous HL_4WF9_033 HL_46680.1 | |
| HL_5ZEB_036 | 1/A/1478:1483 | No text annotation Not in a motif group | homologous HL_7RQB_035 HL_87030.2 | |
| HL_5ZEB_037 | 1/A/1504:1513 | No text annotation Not in a motif group | homologous HL_7RQB_036 HL_69023.2 | |
| HL_5ZEB_038 | 1/A/1563:1608 | No text annotation Not in a motif group | ||
| HL_5ZEB_039 | 1/A/1671:1682 | No text annotation Not in a motif group | ||
| HL_5ZEB_040 | 1/A/1712:1718 | No text annotation Not in a motif group | homologous HL_5J7L_170 HL_46680.1 | |
| HL_5ZEB_042 | 1/A/1785:1788 | No text annotation Not in a motif group | homologous HL_7A0S_039 HL_38927.2 | |
| HL_5ZEB_043 | 1/A/1830:1837 | No text annotation Not in a motif group | homologous HL_7RQB_040 HL_64430.2 | |
| HL_5ZEB_044 | 1/A/1848:1854 | GNRA with one bulged base Not in a motif group | homologous HL_5J7L_174 HL_42097.1 | |
| HL_5ZEB_045 | 1/A/1909:1914 | No text annotation Not in a motif group | homologous HL_7RQB_042 HL_03562.2 | |
| HL_5ZEB_047 | 1/A/1969:1973 | No text annotation Not in a motif group | homologous HL_7RQB_044 HL_76539.2 | |
| HL_5ZEB_048 | 1/A/1994:2004 | No text annotation Not in a motif group | homologous HL_5J7L_178 HL_43613.5 | |
| HL_5ZEB_049 | 1/A/2023:2028 | No text annotation Not in a motif group | homologous HL_7RQB_046 HL_42097.1 | |
| HL_5ZEB_050 | 1/A/2089:2093 | No text annotation Not in a motif group | homologous HL_4WF9_045 NA | |
| HL_5ZEB_051 | 1/A/2134:2144 | No text annotation Not in a motif group | geometric HL_5TBW_049 HL_71924.2 | |
| HL_5ZEB_052 | 1/A/2173:2181 | No text annotation Not in a motif group | homologous HL_5J7L_182 HL_51824.1 | |
| HL_5ZEB_053 | 1/A/2251:2260 | No text annotation Not in a motif group | homologous HL_7RQB_050 HL_90642.6 | |
| HL_5ZEB_054 | 1/A/2366:2371 | No text annotation Not in a motif group | homologous HL_5J7L_184 NA | |
| HL_5ZEB_055 | 1/A/2432:2439 | No text annotation Not in a motif group | homologous HL_5J7L_185 HL_16845.6 | |
| HL_5ZEB_056 | 1/A/2472:2480 | No text annotation Not in a motif group | homologous HL_7A0S_052 HL_53171.2 | |
| HL_5ZEB_057 | 1/A/2488:2500 | No text annotation Not in a motif group | homologous HL_5J7L_187 HL_19870.6 | |
| HL_5ZEB_058 | 1/A/2527:2537 | No text annotation Not in a motif group | homologous HL_5J7L_188 HL_11805.3 | |
| HL_5ZEB_059 | 1/A/2548:2555 | No text annotation Not in a motif group | homologous HL_4WF9_052 HL_12078.2 | |
| HL_5ZEB_060 | 1/A/2579:2586 | No text annotation Not in a motif group | homologous HL_4WF9_053 HL_09136.1 | |
| HL_5ZEB_061 | 1/A/2598:2603 | No text annotation Not in a motif group | homologous HL_7RQB_058 HL_42097.1 | |
| HL_5ZEB_062 | 1/A/2628:2637 | No text annotation Not in a motif group | homologous HL_5J7L_192 HL_30784.2 | |
| HL_5ZEB_063 | 1/A/2695:2703 | No text annotation Not in a motif group | homologous HL_4WF9_056 HL_06192.2 | |
| HL_5ZEB_064 | 1/A/2752:2759 | No text annotation Not in a motif group | homologous HL_5J7L_194 HL_88526.2 | |
| HL_5ZEB_065 | 1/A/2775:2781 | No text annotation Not in a motif group | homologous HL_4WF9_058 HL_43656.2 | |
| HL_5ZEB_066 | 1/A/2818:2823 | No text annotation Not in a motif group | homologous HL_7RQB_063 HL_42097.1 | |
| HL_5ZEB_067 | 1/A/2882:2887 | No text annotation Not in a motif group | homologous HL_7RQB_064 HL_42097.1 | |
| HL_5ZEB_068 | 1/A/2925:2930 | Ribsomal LSU H95 Not in a motif group | homologous HL_5J7L_198 HL_46680.1 | |
| HL_5ZEB_069 | 1/A/2969:2983 | No text annotation Not in a motif group | homologous HL_7RQB_066 HL_56677.7 | |
| HL_5ZEB_070 | 1/A/3019:3023 | No text annotation Not in a motif group | ||
| HL_5ZEB_071 | 1/A/3040:3048 | No text annotation Not in a motif group | homologous HL_5J7L_201 HL_27930.1 | |
| HL_5ZEB_072 | 1/A/3077:3082 | Other HL Not in a motif group | homologous HL_5J7L_202 HL_42097.1 | |
| HL_5ZEB_073 | 1/B/34:48 | No text annotation Not in a motif group | ||
| HL_5ZEB_074 | 1/B/83:90 | No text annotation Not in a motif group | geometric HL_2Y9H_005 HL_47100.1 | |
| HL_5ZEB_075 | 1/a/16:26 | No text annotation Not in a motif group | homologous HL_5J7L_001 HL_89881.2 | |
| HL_5ZEB_076 | 1/a/82:87 | No text annotation Not in a motif group | ||
| HL_5ZEB_077 | 1/a/155:160 | GNRA Not in a motif group | homologous HL_5J7L_003 HL_42097.1 | |
| HL_5ZEB_078 | 1/a/191:196 | No text annotation Not in a motif group | ||
| HL_5ZEB_079 | 1/a/213:218 | No text annotation Not in a motif group | geometric HL_2Y9H_003 HL_16173.1 | |
| HL_5ZEB_080 | 1/a/259:267 | No text annotation Not in a motif group | homologous HL_4LFB_006 HL_69023.2 | |
| HL_5ZEB_081 | 1/a/296:301 | GNRA Not in a motif group | homologous HL_4LFB_007 HL_42097.1 | |
| HL_5ZEB_082 | 1/a/320:333 | No text annotation Not in a motif group | ||
| HL_5ZEB_083 | 1/a/342:347 | UNCG Not in a motif group | homologous HL_4LFB_009 HL_03562.2 | |
| HL_5ZEB_084 | 1/a/379:384 | GNRA Not in a motif group | homologous HL_4LFB_010 HL_42097.1 | |
| HL_5ZEB_085 | 1/a/419:424 | UNCG Not in a motif group | homologous HL_5J7L_011 HL_03562.2 | |
| HL_5ZEB_086 | 1/a/454:459 | No text annotation Not in a motif group | geometric HL_5TBW_006 HL_98984.2 | |
| HL_5ZEB_087 | 1/a/502:507 | No text annotation Not in a motif group | geometric HL_5J7L_143 HL_75407.1 | |
| HL_5ZEB_088 | 1/a/597:603 | No text annotation Not in a motif group | homologous HL_5J7L_014 HL_26881.1 | |
| HL_5ZEB_089 | 1/a/669:678 | No text annotation Not in a motif group | homologous HL_4LFB_015 HL_12326.1 | |
| HL_5ZEB_090 | 1/a/706:711 | Other HL Not in a motif group | homologous HL_5J7L_016 HL_87030.2 | |
| HL_5ZEB_091 | 1/a/766:776 | No text annotation Not in a motif group | homologous HL_5J7L_017 HL_12326.1 | |
| HL_5ZEB_093 | 1/a/844:849 | GNRA Not in a motif group | homologous HL_4LFB_019 HL_42097.1 | |
| HL_5ZEB_094 | 1/a/879:884 | GNRA Not in a motif group | homologous HL_4LFB_020 HL_42097.1 | |
| HL_5ZEB_095 | 1/a/945:954 | No text annotation Not in a motif group | homologous HL_5J7L_021 NA | |
| HL_5ZEB_096 | 1/a/995:1000 | GNRA Not in a motif group | homologous HL_4LFB_022 HL_42097.1 | |
| HL_5ZEB_097 | 1/a/1009:1015 | No text annotation Not in a motif group | ||
| HL_5ZEB_098 | 1/a/1056:1061 | GNRA Not in a motif group | homologous HL_4LFB_024 HL_42097.1 | |
| HL_5ZEB_099 | 1/a/1069:1076 | No text annotation Not in a motif group | homologous HL_4LFB_025 HL_71554.2 | |
| HL_5ZEB_100 | 1/a/1114:1121 | No text annotation Not in a motif group | homologous HL_6CZR_097 NA | |
| HL_5ZEB_101 | 1/a/1146:1152 | GNRA Not in a motif group | homologous HL_4LFB_027 HL_42097.1 | |
| HL_5ZEB_102 | 1/a/1246:1251 | Other HL Not in a motif group | homologous HL_4LFB_028 HL_42097.1 | |
| HL_5ZEB_103 | 1/a/1296:1305 | No text annotation Not in a motif group | homologous HL_4LFB_029 HL_89380.2 | |
| HL_5ZEB_104 | 1/a/1338:1349 | No text annotation Not in a motif group | homologous HL_4LFB_030 HL_96366.1 | |
| HL_5ZEB_105 | 1/a/1433:1436 | No text annotation Not in a motif group | ||
| HL_5ZEB_106 | 1/a/1499:1504 | No text annotation Not in a motif group | homologous HL_4LFB_032 NA | |
| HL_5ZEB_107 | 1/v/13:23 | No text annotation Not in a motif group | homologous HL_1QF6_001 NA | |
| HL_5ZEB_108 | 1/v/32:40 | No text annotation Not in a motif group | homologous HL_6CFJ_107 NA | |
| HL_5ZEB_109 | 1/v/54:62 | T-loop with 2 stacked bulged bases Not in a motif group | homologous HL_4WJ4_003 HL_22280.1 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_5ZEB_010 | No text annotation | ||
| HL_5ZEB_027 | No text annotation | ||
| HL_5ZEB_041 | No text annotation | ||
| HL_5ZEB_046 | No text annotation | ||
| HL_5ZEB_092 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_5ZEB_001 | 1/A/21:27, 1/A/597:603 | Triple sheared with non-canonical cWW Not in a motif group | homologous IL_4WF9_001 IL_66414.6 | |
| IL_5ZEB_002 | 1/A/33:34, 1/A/530:532 | Single bulged A Not in a motif group | homologous IL_7RQB_002 IL_37497.2 | |
| IL_5ZEB_003 | 1/A/40:41, 1/A/522:524 | Minor groove platform Not in a motif group | homologous IL_5J7L_247 IL_42622.2 | |
| IL_5ZEB_004 | 1/A/78:82, 1/A/95:102 | Kink-turn Not in a motif group | homologous IL_7RQB_004 IL_45067.2 | |
| IL_5ZEB_005 | 1/A/182:183, 1/A/211:213 | Single stack bend Not in a motif group | homologous IL_4WF9_007 IL_76488.2 | |
| IL_5ZEB_006 | 1/A/187:193, 1/A/200:207 | 8x7 Sarcin-Ricin; G-bulge Not in a motif group | homologous IL_7RQB_006 IL_04346.7 | |
| IL_5ZEB_007 | 1/A/239:245, 1/A/253:258 | 7x6 Sarcin-Ricin; G-bulge Not in a motif group | homologous IL_7RQB_007 IL_76042.2 | |
| IL_5ZEB_008 | 1/A/322:325, 1/A/450:454 | No text annotation Not in a motif group | ||
| IL_5ZEB_009 | 1/A/325:329, 1/A/446:450 | No text annotation Not in a motif group | geometric IL_5TBW_121 IL_05145.2 | |
| IL_5ZEB_010 | 1/A/356:364, 1/A/438:439 | No text annotation Not in a motif group | ||
| IL_5ZEB_011 | 1/A/369:371, 1/A/432:433 | Single bulged U Not in a motif group | geometric IL_4V9F_107 IL_83039.13 | |
| IL_5ZEB_012 | 1/A/374:376, 1/A/425:429 | No text annotation Not in a motif group | homologous IL_7RQB_013 IL_69440.1 | |
| IL_5ZEB_013 | 1/A/382:384, 1/A/397:398 | Single bulged U Not in a motif group | geometric IL_3TZR_002 IL_83039.13 | |
| IL_5ZEB_014 | 1/A/569:572, 1/A/583:596 | No text annotation Not in a motif group | geometric IL_5TBW_014 IL_60992.6 | |
| IL_5ZEB_015 | 1/A/623:626, 1/A/646:649 | Double sheared Not in a motif group | homologous IL_5J7L_256 IL_09705.9 | |
| IL_5ZEB_016 | 1/A/630:631, 1/A/640:642 | No text annotation Not in a motif group | ||
| IL_5ZEB_017 | 1/A/656:658, 1/A/667:669 | No text annotation Not in a motif group | homologous IL_5J7L_257 IL_95997.1 | |
| IL_5ZEB_018 | 1/A/683:685, 1/A/780:781 | Single bulged A Not in a motif group | homologous IL_7A0S_012 IL_37497.2 | |
| IL_5ZEB_019 | 1/A/699:703, 1/A/712:716 | AAA cross-strand stack Not in a motif group | homologous IL_7A0S_013 IL_17136.1 | |
| IL_5ZEB_020 | 1/A/787:789, 1/A/921:923 | No text annotation Not in a motif group | geometric IL_4WF9_020 IL_95997.1 | |
| IL_5ZEB_021 | 1/A/789:793, 1/A/914:921 | No text annotation Not in a motif group | homologous IL_7RQB_018 IL_17470.6 | |
| IL_5ZEB_022 | 1/A/812:813, 1/A/878:880 | Single bulged A Not in a motif group | geometric IL_5J7L_261 IL_37497.2 | |
| IL_5ZEB_023 | 1/A/817:818, 1/A/843:845 | Single bulged G Not in a motif group | homologous IL_5J7L_262 IL_00225.2 | |
| IL_5ZEB_024 | 1/A/818:822, 1/A/839:843 | Triple sheared Not in a motif group | geometric IL_4V9F_027 IL_56467.8 | |
| IL_5ZEB_025 | 1/A/853:855, 1/A/872:873 | Major groove platform Not in a motif group | homologous IL_4WF9_026 IL_27635.1 | |
| IL_5ZEB_026 | 1/A/890:892, 1/A/902:906 | Multiple bulged bases Not in a motif group | geometric IL_5J7L_265 IL_90991.6 | |
| IL_5ZEB_027 | 1/A/952:953, 1/A/1057:1059 | Single stack bend Not in a motif group | homologous IL_7A0S_022 IL_92001.1 | |
| IL_5ZEB_028 | 1/A/959:961, 1/A/1048:1051 | Isolated near basepair Not in a motif group | geometric IL_4V88_406 IL_52767.2 | |
| IL_5ZEB_029 | 1/A/961:964, 1/A/1043:1048 | No text annotation Not in a motif group | ||
| IL_5ZEB_030 | 1/A/971:977, 1/A/1030:1036 | 7x7 Sarcin-Ricin with intercalated A; G-bulge Not in a motif group | homologous IL_5J7L_270 IL_93830.3 | |
| IL_5ZEB_031 | 1/A/977:978, 1/A/1028:1030 | Minor groove platform Not in a motif group | geometric IL_4V9F_034 IL_42622.2 | |
| IL_5ZEB_032 | 1/A/979:984, 1/A/1024:1027 | C-loop Not in a motif group | homologous IL_7RQB_029 IL_02509.1 | |
| IL_5ZEB_033 | 1/A/986:988, 1/A/1020:1022 | Isolated cWS basepair Not in a motif group | homologous IL_4WF9_034 IL_52767.2 | |
| IL_5ZEB_034 | 1/A/991:996, 1/A/1012:1017 | No text annotation Not in a motif group | geometric IL_4V88_421 IL_86929.2 | |
| IL_5ZEB_035 | 1/A/996:999, 1/A/1008:1012 | No text annotation Not in a motif group | ||
| IL_5ZEB_036 | 1/A/1066:1067, 1/A/1084:1086 | Single bulged G Not in a motif group | geometric IL_4LVW_002 IL_00225.2 | |
| IL_5ZEB_037 | 1/A/1112:1114, 1/A/1278:1279 | Single bulged C Not in a motif group | homologous IL_5J7L_276 IL_61258.12 | |
| IL_5ZEB_038 | 1/A/1116:1120, 1/A/1272:1276 | UAA/GAN Not in a motif group | homologous IL_4WF9_036 IL_89002.2 | |
| IL_5ZEB_039 | 1/A/1122:1129, 1/A/1269:1270 | SSU/LSU pseudoknot Not in a motif group | homologous IL_7RQB_037 IL_15861.7 | |
| IL_5ZEB_040 | 1/A/1129:1131, 1/A/1268:1269 | No text annotation Not in a motif group | ||
| IL_5ZEB_041 | 1/A/1136:1142, 1/A/1258:1263 | No text annotation Not in a motif group | geometric IL_7RQB_039 IL_57188.3 | |
| IL_5ZEB_042 | 1/A/1142:1148, 1/A/1242:1258 | No text annotation Not in a motif group | geometric IL_5J7L_281 IL_50715.1 | |
| IL_5ZEB_043 | 1/A/1149:1152, 1/A/1239:1241 | Isolated non-canonical cWW with bulges Not in a motif group | homologous IL_5J7L_282 IL_82068.2 | |
| IL_5ZEB_044 | 1/A/1156:1158, 1/A/1233:1235 | No text annotation Not in a motif group | homologous IL_4WF9_042 IL_95997.1 | |
| IL_5ZEB_045 | 1/A/1161:1169, 1/A/1226:1230 | Kink-turn Not in a motif group | homologous IL_5J7L_284 IL_90538.4 | |
| IL_5ZEB_046 | 1/A/1177:1180, 1/A/1194:1197 | No text annotation Not in a motif group | homologous IL_5J7L_285 IL_23544.2 | |
| IL_5ZEB_047 | 1/A/1205:1209, 1/A/1218:1220 | Major groove platform with extra cWW Not in a motif group | geometric IL_5D8H_003 IL_05564.2 | |
| IL_5ZEB_048 | 1/A/1311:1313, 1/A/1362:1365 | Isolated cWS basepair Not in a motif group | homologous IL_7A0S_041 IL_52767.2 | |
| IL_5ZEB_049 | 1/A/1322:1329, 1/A/1349:1353 | Kink-turn Not in a motif group | homologous IL_5J7L_288 IL_70923.2 | |
| IL_5ZEB_050 | 1/A/1333:1334, 1/A/1343:1345 | Single bulged A Not in a motif group | geometric IL_7RQB_101 IL_37497.2 | |
| IL_5ZEB_051 | 1/A/1377:1384, 1/A/2235:2241 | 8x7 Sarcin-Ricin; G-bulge Not in a motif group | homologous IL_5J7L_289 IL_04346.7 | |
| IL_5ZEB_052 | 1/A/1425:1428, 1/A/1821:1822 | Major groove platform; stack outside cWW Not in a motif group | homologous IL_7A0S_046 IL_50694.2 | |
| IL_5ZEB_053 | 1/A/1434:1438, 1/A/1446:1448 | C-loop Not in a motif group | homologous IL_7RQB_051 IL_63596.6 | |
| IL_5ZEB_054 | 1/A/1466:1470, 1/A/1491:1495 | UAA/GAN Not in a motif group | homologous IL_5J7L_292 IL_89002.2 | |
| IL_5ZEB_055 | 1/A/1472:1476, 1/A/1485:1489 | tSH-tHW-tHS Not in a motif group | homologous IL_5J7L_293 IL_17136.1 | |
| IL_5ZEB_056 | 1/A/1529:1531, 1/A/1804:1806 | Isolated near basepair Not in a motif group | geometric IL_4V9F_077 IL_52767.2 | |
| IL_5ZEB_057 | 1/A/1540:1543, 1/A/1627:1632 | No text annotation Not in a motif group | ||
| IL_5ZEB_058 | 1/A/1550:1557, 1/A/1614:1620 | No text annotation Not in a motif group | ||
| IL_5ZEB_059 | 1/A/1560:1563, 1/A/1608:1611 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_1D4R_001 IL_30621.2 | |
| IL_5ZEB_060 | 1/A/1638:1642, 1/A/1797:1800 | Other IL Not in a motif group | homologous IL_4WF9_054 IL_04059.1 | |
| IL_5ZEB_061 | 1/A/1653:1656, 1/A/1777:1781 | Tandem non-canonical cWW pairs Not in a motif group | homologous IL_5J7L_296 IL_55178.1 | |
| IL_5ZEB_062 | 1/A/1658:1661, 1/A/1771:1775 | tSH-tHW Not in a motif group | homologous IL_7RQB_057 IL_04059.1 | |
| IL_5ZEB_063 | 1/A/1689:1692, 1/A/1742:1746 | No text annotation Not in a motif group | homologous IL_5J7L_299 IL_68574.2 | |
| IL_5ZEB_064 | 1/A/1694:1699, 1/A/1735:1740 | 5x5 Sarcin-Ricin with intercalated A; G-bulge Not in a motif group | geometric IL_7A0S_027 IL_81631.1 | |
| IL_5ZEB_065 | 1/A/1702:1703, 1/A/1726:1732 | No text annotation Not in a motif group | homologous IL_7RQB_061 IL_52493.1 | |
| IL_5ZEB_066 | 1/A/1709:1711, 1/A/1719:1720 | Stack outside cWW Not in a motif group | geometric IL_6JQ6_004 IL_16396.2 | |
| IL_5ZEB_067 | 1/A/1748:1751, 1/A/1762:1766 | UAA/GAN variation Not in a motif group | homologous IL_5J7L_303 IL_07235.1 | |
| IL_5ZEB_068 | 1/A/1869:1874, 1/A/2228:2230 | No text annotation Not in a motif group | ||
| IL_5ZEB_069 | 1/A/1881:1883, 1/A/2219:2221 | Isolated tWW turn Not in a motif group | homologous IL_4WF9_063 IL_54997.7 | |
| IL_5ZEB_070 | 1/A/1884:1887, 1/A/2217:2218 | Major groove platform; stack outside cWW Not in a motif group | homologous IL_4WF9_064 IL_50694.2 | |
| IL_5ZEB_071 | 1/A/1887:1892, 1/A/2214:2217 | Intercalated tWH Not in a motif group | geometric IL_4WF9_065 IL_82842.2 | |
| IL_5ZEB_072 | 1/A/1904:1909, 1/A/1914:1920 | tSH-tSH-tHH-tHS Not in a motif group | geometric IL_7RQB_068 IL_65969.2 | |
| IL_5ZEB_073 | 1/A/1930:1934, 1/A/1960:1963 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_5J7L_296 IL_55178.1 | |
| IL_5ZEB_074 | 1/A/1937:1942, 1/A/1952:1957 | tSH-tHW-tHS-cWW Not in a motif group | geometric IL_1LNT_002 IL_76308.4 | |
| IL_5ZEB_075 | 1/A/1987:1988, 1/A/2204:2206 | Single bulged A Not in a motif group | homologous IL_7RQB_069 IL_37497.2 | |
| IL_5ZEB_076 | 1/A/2015:2021, 1/A/2030:2038 | Kink-turn related Not in a motif group | homologous IL_5J7L_313 IL_17069.3 | |
| IL_5ZEB_077 | 1/A/2054:2057, 1/A/2126:2127 | Major groove outside cWW, minor groove, intercalation pocket Not in a motif group | homologous IL_5J7L_314 IL_88739.1 | |
| IL_5ZEB_078 | 1/A/2058:2059, 1/A/2122:2125 | Major groove outside cWW, minor groove, intercalation pocket Not in a motif group | homologous IL_5J7L_315 IL_16396.2 | |
| IL_5ZEB_079 | 1/A/2063:2066, 1/A/2117:2118 | Major groove minor groove platform; mini C-loop Not in a motif group | homologous IL_5J7L_316 IL_09061.6 | |
| IL_5ZEB_080 | 1/A/2068:2073, 1/A/2110:2115 | No text annotation Not in a motif group | ||
| IL_5ZEB_081 | 1/A/2073:2078, 1/A/2105:2110 | No text annotation Not in a motif group | geometric IL_5TBW_026 IL_19954.2 | |
| IL_5ZEB_082 | 1/A/2081:2084, 1/A/2098:2102 | UAA/GAN related Not in a motif group | homologous IL_5J7L_317 IL_77691.1 | |
| IL_5ZEB_083 | 1/A/2157:2158, 1/A/2188:2191 | Multiple bulged bases Not in a motif group | homologous IL_5J7L_318 IL_59677.2 | |
| IL_5ZEB_084 | 1/A/2158:2169, 1/A/2185:2188 | No text annotation Not in a motif group | geometric IL_7A0S_072 IL_81589.2 | |
| IL_5ZEB_085 | 1/A/2274:2276, 1/A/2841:2842 | Major groove platform Not in a motif group | homologous IL_7RQB_078 IL_27635.1 | |
| IL_5ZEB_086 | 1/A/2278:2280, 1/A/2836:2839 | No text annotation Not in a motif group | ||
| IL_5ZEB_087 | 1/A/2293:2294, 1/A/2662:2665 | Minor groove platform Not in a motif group | homologous IL_7RQB_081 IL_42622.2 | |
| IL_5ZEB_088 | 1/A/2304:2306, 1/A/2460:2463 | Isolated tHS basepair with bulges Not in a motif group | homologous IL_7RQB_082 IL_38958.7 | |
| IL_5ZEB_089 | 1/A/2308:2310, 1/A/2456:2458 | No text annotation Not in a motif group | homologous IL_5J7L_326 IL_95997.1 | |
| IL_5ZEB_090 | 1/A/2317:2319, 1/A/2416:2418 | CC cWW Not in a motif group | geometric IL_4KNQ_001 IL_95997.1 | |
| IL_5ZEB_091 | 1/A/2330:2345, 1/A/2399:2405 | No text annotation Not in a motif group | ||
| IL_5ZEB_092 | 1/A/2347:2351, 1/A/2383:2397 | No text annotation Not in a motif group | ||
| IL_5ZEB_093 | 1/A/2352:2359, 1/A/2378:2382 | Kink-turn Not in a motif group | homologous IL_3U4M_004 IL_70923.2 | |
| IL_5ZEB_094 | 1/A/2425:2427, 1/A/2444:2445 | Single bulged U Not in a motif group | homologous IL_5J7L_331 IL_83039.13 | |
| IL_5ZEB_095 | 1/A/2521:2523, 1/A/2541:2545 | Isolated tHS basepair with bulges Not in a motif group | homologous IL_4WF9_086 IL_38958.7 | |
| IL_5ZEB_096 | 1/A/2574:2577, 1/A/2588:2591 | Double sheared Not in a motif group | homologous IL_5J7L_333 IL_09705.9 | |
| IL_5ZEB_097 | 1/A/2625:2627, 1/A/2638:2639 | Single bulged U Not in a motif group | geometric IL_3WBM_001 IL_83039.13 | |
| IL_5ZEB_098 | 1/A/2677:2678, 1/A/2722:2724 | Single stack bend Not in a motif group | homologous IL_4WF9_089 IL_76488.2 | |
| IL_5ZEB_099 | 1/A/2678:2679, 1/A/2720:2722 | Major groove platform Not in a motif group | geometric IL_7RQB_092 IL_27635.1 | |
| IL_5ZEB_100 | 1/A/2680:2683, 1/A/2717:2719 | Major groove platform with extra pair Not in a motif group | homologous IL_7RQB_093 IL_63450.2 | |
| IL_5ZEB_101 | 1/A/2683:2685, 1/A/2713:2717 | Major groove minor groove platform with extra cWW Not in a motif group | geometric IL_7RQB_094 IL_92788.2 | |
| IL_5ZEB_102 | 1/A/2685:2687, 1/A/2711:2713 | No text annotation Not in a motif group | geometric IL_3BNT_001 IL_95997.1 | |
| IL_5ZEB_103 | 1/A/2690:2694, 1/A/2704:2708 | Triple sheared Not in a motif group | homologous IL_4WF9_093 IL_56467.8 | |
| IL_5ZEB_104 | 1/A/2731:2732, 1/A/2804:2806 | Major groove platform Not in a motif group | homologous IL_7RQB_096 IL_76223.2 | |
| IL_5ZEB_105 | 1/A/2734:2736, 1/A/2798:2802 | Isolated non-canonical cWW with bulges Not in a motif group | geometric IL_7RQB_097 IL_90933.2 | |
| IL_5ZEB_106 | 1/A/2736:2737, 1/A/2795:2798 | No text annotation Not in a motif group | homologous IL_4WF9_096 IL_71530.2 | |
| IL_5ZEB_107 | 1/A/2746:2747, 1/A/2764:2767 | Minor groove platform with intercalation Not in a motif group | homologous IL_5J7L_342 IL_95601.3 | |
| IL_5ZEB_108 | 1/A/2815:2816, 1/A/2825:2827 | Single bulged A Not in a motif group | homologous IL_7RQB_101 IL_37497.2 | |
| IL_5ZEB_109 | 1/A/2860:2864, 1/A/2998:3006 | tSH-tHS-tHW Not in a motif group | homologous IL_7RQB_102 IL_04638.1 | |
| IL_5ZEB_110 | 1/A/2876:2882, 1/A/2887:2892 | Sarcin-Ricin target in LSU H95; G-bulge Not in a motif group | geometric IL_5J7L_346 IL_16458.1 | |
| IL_5ZEB_111 | 1/A/2904:2908, 1/A/2949:2951 | C-loop Not in a motif group | homologous IL_7RQB_104 IL_63596.6 | |
| IL_5ZEB_112 | 1/A/2911:2915, 1/A/2942:2946 | No text annotation Not in a motif group | homologous IL_4WF9_102 IL_08296.3 | |
| IL_5ZEB_113 | 1/A/2919:2920, 1/A/2935:2938 | Multiple bulged bases Not in a motif group | homologous IL_5J7L_349 IL_71530.2 | |
| IL_5ZEB_114 | 1/A/2961:2966, 1/A/2986:2991 | UAA/GAN with extra cWW Not in a motif group | homologous IL_5J7L_350 IL_49767.5 | |
| IL_5ZEB_115 | 1/A/3059:3061, 1/A/3098:3101 | Isolated non-canonical cWW with bulges Not in a motif group | geometric IL_5ML7_010 IL_82068.2 | |
| IL_5ZEB_116 | 1/A/3064:3066, 1/A/3092:3095 | Decoding loop related Not in a motif group | homologous IL_7A0S_100 IL_02284.5 | |
| IL_5ZEB_117 | 1/A/3068:3073, 1/A/3086:3090 | No text annotation Not in a motif group | homologous IL_4WF9_108 IL_83162.5 | |
| IL_5ZEB_119 | 1/B/6:9, 1/B/108:111 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_6CZR_168 IL_67743.1 | |
| IL_5ZEB_120 | 1/B/29:31, 1/B/51:55 | No text annotation Not in a motif group | ||
| IL_5ZEB_121 | 1/B/31:34, 1/B/48:51 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_4K27_001 IL_30621.2 | |
| IL_5ZEB_122 | 1/a/34:36, 1/a/532:533 | Single bulged G Not in a motif group | homologous IL_6CZR_113 IL_00225.2 | |
| IL_5ZEB_123 | 1/a/48:49, 1/a/396:398 | Single bulged A Not in a motif group | homologous IL_4LFB_002 IL_37497.2 | |
| IL_5ZEB_124 | 1/a/51:56, 1/a/359:361 | No text annotation Not in a motif group | homologous IL_5J7L_003 IL_11178.1 | |
| IL_5ZEB_125 | 1/a/58:60, 1/a/356:357 | Minor groove platform Not in a motif group | homologous IL_5J7L_004 IL_93353.1 | |
| IL_5ZEB_126 | 1/a/67:70, 1/a/99:100 | Multiple bulged bases Not in a motif group | homologous IL_4LFB_005 IL_76389.1 | |
| IL_5ZEB_127 | 1/a/71:73, 1/a/95:98 | Minor groove platform with extra cWW Not in a motif group | homologous IL_5J7L_006 IL_65006.1 | |
| IL_5ZEB_128 | 1/a/74:77, 1/a/93:94 | Minor groove platform Not in a motif group | homologous IL_5J7L_007 IL_15052.1 | |
| IL_5ZEB_129 | 1/a/77:78, 1/a/91:93 | Major groove platform Not in a motif group | geometric IL_4V9F_082 IL_27635.1 | |
| IL_5ZEB_130 | 1/a/125:128, 1/a/231:232 | Multiple bulged bases Not in a motif group | homologous IL_4LFB_007 IL_16396.2 | |
| IL_5ZEB_131 | 1/a/129:133, 1/a/227:230 | No text annotation Not in a motif group | homologous IL_4LFB_008 IL_58764.3 | |
| IL_5ZEB_132 | 1/a/144:150, 1/a/165:172 | tWH-tWH-tHW-tHW Not in a motif group | homologous IL_5J7L_012 IL_80604.2 | |
| IL_5ZEB_133 | 1/a/187:188, 1/a/199:201 | No text annotation Not in a motif group | ||
| IL_5ZEB_134 | 1/a/242:247, 1/a/277:284 | Kink-turn with non-sequential stacking Not in a motif group | homologous IL_5J7L_014 IL_45067.2 | |
| IL_5ZEB_135 | 1/a/249:252, 1/a/274:275 | No text annotation Not in a motif group | homologous IL_4LFB_012 IL_48100.2 | |
| IL_5ZEB_136 | 1/a/292:293, 1/a/304:308 | C-loop Not in a motif group | homologous IL_4LFB_013 IL_37712.2 | |
| IL_5ZEB_137 | 1/a/367:369, 1/a/392:393 | Single bulged U Not in a motif group | homologous IL_4LFB_014 IL_83039.13 | |
| IL_5ZEB_138 | 1/a/371:375, 1/a/389:390 | C-loop Not in a motif group | geometric IL_5J7L_018 IL_75255.1 | |
| IL_5ZEB_139 | 1/a/375:376, 1/a/387:389 | Single bulged G Not in a motif group | homologous IL_4LFB_016 IL_00225.2 | |
| IL_5ZEB_140 | 1/a/409:416, 1/a/427:433 | No text annotation Not in a motif group | homologous IL_4LFB_017 IL_28026.1 | |
| IL_5ZEB_141 | 1/a/440:442, 1/a/472:477 | No text annotation Not in a motif group | homologous IL_5J7L_021 IL_22248.1 | |
| IL_5ZEB_142 | 1/a/446:450, 1/a/463:468 | 6x5 Sarcin-Ricin; G-bulge Not in a motif group | homologous IL_4LFB_018 IL_88269.3 | |
| IL_5ZEB_143 | 1/a/450:453, 1/a/460:463 | No text annotation Not in a motif group | ||
| IL_5ZEB_144 | 1/a/484:491, 1/a/520:521 | SSU/LSU pseudoknot Not in a motif group | homologous IL_4LFB_020 IL_15861.7 | |
| IL_5ZEB_145 | 1/a/495:501, 1/a/508:516 | No text annotation Not in a motif group | geometric IL_4V88_415 IL_55871.1 | |
| IL_5ZEB_146 | 1/a/549:555, 1/a/862:863 | No text annotation Not in a motif group | homologous IL_4LFB_022 IL_69996.1 | |
| IL_5ZEB_147 | 1/a/560:564, 1/a/737:741 | tSH-tHW-tHS Not in a motif group | homologous IL_5J7L_027 IL_17136.1 | |
| IL_5ZEB_148 | 1/a/574:576, 1/a/624:625 | Major groove platform Not in a motif group | homologous IL_4LFB_024 IL_27635.1 | |
| IL_5ZEB_149 | 1/a/577:578, 1/a/620:623 | Major groove minor groove platform; mini C-loop Not in a motif group | homologous IL_4LFB_025 IL_09061.6 | |
| IL_5ZEB_150 | 1/a/585:591, 1/a/609:613 | No text annotation Not in a motif group | ||
| IL_5ZEB_151 | 1/a/634:635, 1/a/731:734 | Major groove platform; stack outside cWW Not in a motif group | homologous IL_5J7L_031 IL_50694.2 | |
| IL_5ZEB_152 | 1/a/637:638, 1/a/727:729 | Major groove platform Not in a motif group | homologous IL_4LFB_028 IL_27635.1 | |
| IL_5ZEB_153 | 1/a/642:646, 1/a/720:723 | Tandem non-canonical cWW pairs Not in a motif group | homologous IL_5J7L_033 IL_71110.1 | |
| IL_5ZEB_154 | 1/a/653:658, 1/a/692:697 | No text annotation Not in a motif group | geometric IL_4LFB_030 IL_04668.1 | |
| IL_5ZEB_155 | 1/a/664:668, 1/a/679:686 | Kink-turn Not in a motif group | homologous IL_5J7L_035 IL_45067.2 | |
| IL_5ZEB_156 | 1/a/754:758, 1/a/784:785 | Left turn Not in a motif group | homologous IL_5J7L_036 IL_29346.1 | |
| IL_5ZEB_157 | 1/a/759:763, 1/a/779:783 | tSH-tHW-tHS Not in a motif group | homologous IL_4LFB_033 IL_17136.1 | |
| IL_5ZEB_158 | 1/a/869:876, 1/a/887:892 | 8x6 Sarcin-Ricin with inserted Y; G-bulge Not in a motif group | homologous IL_5J7L_038 IL_24606.2 | |
| IL_5ZEB_159 | 1/a/904:905, 1/a/1376:1378 | Single bulged A Not in a motif group | homologous IL_4LFB_035 IL_37497.2 | |
| IL_5ZEB_160 | 1/a/907:909, 1/a/1373:1374 | Single bulged G Not in a motif group | homologous IL_4LFB_036 IL_00225.2 | |
| IL_5ZEB_161 | 1/a/915:917, 1/a/1363:1367 | Minor groove platform Not in a motif group | homologous IL_5J7L_041 IL_47078.1 | |
| IL_5ZEB_162 | 1/a/935:936, 1/a/1207:1209 | Minor groove platform Not in a motif group | homologous IL_4LFB_038 IL_42622.2 | |
| IL_5ZEB_163 | 1/a/975:979, 1/a/1024:1025 | Minor groove platform Not in a motif group | homologous IL_4LFB_039 IL_47078.1 | |
| IL_5ZEB_164 | 1/a/984:985, 1/a/1017:1019 | Single stack bend Not in a motif group | geometric IL_4WF9_007 IL_76488.2 | |
| IL_5ZEB_165 | 1/a/1028:1030, 1/a/1189:1190 | Single bulged U Not in a motif group | homologous IL_5J7L_046 IL_83039.13 | |
| IL_5ZEB_166 | 1/a/1032:1036, 1/a/1185:1187 | Isolated cWS basepair Not in a motif group | homologous IL_4LFB_044 IL_76319.2 | |
| IL_5ZEB_167 | 1/a/1037:1038, 1/a/1180:1184 | Minor groove platform Not in a motif group | homologous IL_5J7L_048 IL_93353.1 | |
| IL_5ZEB_168 | 1/a/1040:1041, 1/a/1176:1178 | Single bulged A Not in a motif group | homologous IL_5J7L_049 IL_37497.2 | |
| IL_5ZEB_169 | 1/a/1041:1043, 1/a/1174:1176 | No text annotation Not in a motif group | geometric IL_5J7L_050 IL_95997.1 | |
| IL_5ZEB_170 | 1/a/1104:1108, 1/a/1125:1130 | No text annotation Not in a motif group | homologous IL_5J7L_051 IL_93211.1 | |
| IL_5ZEB_171 | 1/a/1109:1112, 1/a/1123:1124 | Minor groove platform Not in a motif group | homologous IL_5J7L_052 IL_15052.1 | |
| IL_5ZEB_172 | 1/a/1139:1142, 1/a/1156:1162 | No text annotation Not in a motif group | geometric IL_5J7L_053 IL_42032.1 | |
| IL_5ZEB_173 | 1/a/1228:1234, 1/a/1265:1272 | No text annotation Not in a motif group | homologous IL_5J7L_054 IL_09129.1 | |
| IL_5ZEB_174 | 1/a/1236:1239, 1/a/1258:1263 | No text annotation Not in a motif group | homologous IL_4LFB_052 IL_84205.1 | |
| IL_5ZEB_175 | 1/a/1240:1244, 1/a/1253:1257 | Triple sheared Not in a motif group | homologous IL_5J7L_056 IL_56467.8 | |
| IL_5ZEB_176 | 1/a/1285:1290, 1/a/1311:1316 | No text annotation Not in a motif group | geometric IL_4LFB_055 IL_19954.2 | |
| IL_5ZEB_177 | 1/a/1382:1384, 1/a/1485:1488 | No text annotation Not in a motif group | homologous IL_4LFB_056 NA | |
| IL_5ZEB_178 | 1/a/1384:1387, 1/a/1481:1485 | No text annotation Not in a motif group | geometric IL_4V88_464 IL_99670.1 | |
| IL_5ZEB_179 | 1/a/1388:1390, 1/a/1478:1480 | No text annotation Not in a motif group | geometric IL_4WF9_020 IL_95997.1 | |
| IL_5ZEB_180 | 1/a/1390:1392, 1/a/1475:1478 | Isolated non-canonical cWW with bulges Not in a motif group | geometric IL_3TD0_005 IL_82068.2 | |
| IL_5ZEB_181 | 1/a/1395:1397, 1/a/1470:1472 | No text annotation Not in a motif group | homologous IL_5J7L_061 IL_95997.1 | |
| IL_5ZEB_182 | 1/a/1399:1402, 1/a/1465:1468 | Double sheared Not in a motif group | homologous IL_5J7L_062 IL_09705.9 | |
| IL_5ZEB_183 | 1/a/1407:1410, 1/a/1457:1460 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_5TBW_100 IL_30621.2 | |
| IL_5ZEB_184 | 1/a/1413:1418, 1/a/1450:1454 | Triple sheared related Not in a motif group | homologous IL_5J7L_063 IL_64879.2 | |
| IL_5ZEB_185 | 1/a/1418:1420, 1/a/1448:1450 | No text annotation Not in a motif group | geometric IL_4LFB_063 IL_95997.1 | |
| IL_5ZEB_186 | 1/a/1423:1426, 1/a/1443:1445 | Isolated tHS basepair with bulges Not in a motif group | geometric IL_7RQB_082 IL_38958.7 | |
| IL_5ZEB_187 | 1/a/1428:1431, 1/a/1439:1441 | No text annotation Not in a motif group | homologous IL_5J7L_065 IL_02284.5 | |
| IL_5ZEB_188 | 1/a/1432:1433, 1/a/1436:1438 | No text annotation Not in a motif group |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_5ZEB_118 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J3_5ZEB_001 | 1/A/27:28, 1/A/562:569, 1/A/596:597 | No text annotation Not in a motif group | ||
| J3_5ZEB_002 | 1/A/53:54, 1/A/67:73, 1/A/107:111 | No text annotation Not in a motif group | homologous J3_7RQB_002 NA | |
| J3_5ZEB_003 | 1/A/317:319, 1/A/457:463, 1/A/487:492 | No text annotation Not in a motif group | ||
| J3_5ZEB_004 | 1/A/329:331, 1/A/350:352, 1/A/443:446 | No text annotation Not in a motif group | ||
| J3_5ZEB_005 | 1/A/798:804, 1/A/888:890, 1/A/906:909 | No text annotation Not in a motif group | homologous J3_5J7L_038 NA | |
| J3_5ZEB_006 | 1/A/813:815, 1/A/847:851, 1/A/875:878 | No text annotation Not in a motif group | homologous J3_7RQB_005 NA | |
| J3_5ZEB_007 | 1/A/1173:1175, 1/A/1199:1205, 1/A/1220:1222 | No text annotation Not in a motif group | homologous J3_5J7L_040 NA | |
| J3_5ZEB_008 | 1/A/1413:1418, 1/A/1843:1845, 1/A/1857:1860 | No text annotation Not in a motif group | homologous J3_5J7L_041 NA | |
| J3_5ZEB_009 | 1/A/1421:1424, 1/A/1823:1829, 1/A/1838:1840 | No text annotation Not in a motif group | homologous J3_7A0S_007 NA | |
| J3_5ZEB_010 | 1/A/1459:1465, 1/A/1496:1500, 1/A/1517:1518 | No text annotation Not in a motif group | homologous J3_7RQB_009 NA | |
| J3_5ZEB_011 | 1/A/1531:1537, 1/A/1635:1637, 1/A/1801:1804 | No text annotation Not in a motif group | ||
| J3_5ZEB_012 | 1/A/1646:1650, 1/A/1784:1785, 1/A/1788:1793 | No text annotation Not in a motif group | ||
| J3_5ZEB_013 | 1/A/2314:2316, 1/A/2419:2423, 1/A/2447:2452 | No text annotation Not in a motif group | homologous J3_5J7L_044 NA | |
| J3_5ZEB_014 | 1/A/2519:2521, 1/A/2545:2547, 1/A/2556:2561 | No text annotation Not in a motif group | ||
| J3_5ZEB_015 | 1/A/2741:2744, 1/A/2769:2771, 1/A/2785:2791 | No text annotation Not in a motif group | homologous J3_7RQB_012 NA | |
| J3_5ZEB_016 | 1/A/3035:3037, 1/A/3051:3057, 1/A/3103:3107 | No text annotation Not in a motif group | ||
| J3_5ZEB_017 | 1/a/50:51, 1/a/361:367, 1/a/393:395 | No text annotation Not in a motif group | ||
| J3_5ZEB_018 | 1/a/566:568, 1/a/631:634, 1/a/734:735 | No text annotation Not in a motif group | ||
| J3_5ZEB_019 | 1/a/652:653, 1/a/697:705, 1/a/712:714 | No text annotation Not in a motif group | homologous J3_6CZR_017 NA | |
| J3_5ZEB_020 | 1/a/806:809, 1/a/839:843, 1/a/850:856 | No text annotation Not in a motif group | homologous J3_5J7L_004 NA | |
| J3_5ZEB_021 | 1/a/918:921, 1/a/1326:1332, 1/a/1355:1362 | No text annotation Not in a motif group | homologous J3_4LFB_002 NA | |
| J3_5ZEB_022 | 1/a/925:928, 1/a/1216:1218, 1/a/1319:1322 | No text annotation Not in a motif group | ||
| J3_5ZEB_023 | 1/a/937:944, 1/a/955:966, 1/a/1202:1206 | No text annotation Not in a motif group | ||
| J3_5ZEB_024 | 1/a/972:975, 1/a/1025:1027, 1/a/1191:1196 | No text annotation Not in a motif group | ||
| J3_5ZEB_025 | 1/a/985:989, 1/a/1006:1009, 1/a/1015:1017 | No text annotation Not in a motif group | ||
| J3_5ZEB_026 | 1/a/1043:1048, 1/a/1087:1093, 1/a/1168:1174 | No text annotation Not in a motif group | ||
| J3_5ZEB_027 | 1/a/1053:1054, 1/a/1063:1067, 1/a/1078:1082 | No text annotation Not in a motif group | homologous J3_5J7L_009 NA | |
| J3_5ZEB_028 | 1/a/1096:1098, 1/a/1136:1139, 1/a/1162:1165 | No text annotation Not in a motif group | homologous J3_5J7L_010 NA | |
| J3_5ZEB_029 | 1/a/1218:1222, 1/a/1278:1285, 1/a/1316:1319 | No text annotation Not in a motif group | homologous J3_4LFB_009 NA |
Problematic loops
No problematic loops
Coloring options: