#Varna 2DMotifNtsSize
1
  • IL_97217.12
IL_97217.12
  • Basepair signature: cWW-cWW
  • History status: Updated, 1 parent
  • Name: 1-3 bulged nucleotides, same chain | 16S h19 IL and 23S H41 IL | cWW-bulge-cWW
5262
2
  • IL_78141.1
IL_78141.1
  • Basepair signature: cWW-cWW-cWW
  • History status: > 2 parents
  • Name: cWW AG or UU | cWW AG or water inserted cWW Y-Y. | cWH basepair with syn base | cWW AG or water inserted cWW Y-Y. | Single sheared (tHS) with bulged bases. LSU Helix 75 (H75) | 16S h34 ILa : Part of larger motif
6228
3
  • IL_41766.7
IL_41766.7
  • Basepair signature: cWW-cWW-cWW-cWW
  • History status: Updated, 1 parent
  • Name: Tandem cWW pairs (Not AU or GC)
857
4
  • IL_39199.5
IL_39199.5
  • Basepair signature: cWW-tHS-cSH-cWW
  • History status: Updated, 1 parent
  • Name: Hoogsteen-edge Platform, Single bulged base
556
5
  • IL_56465.5
IL_56465.5
  • Basepair signature: cWW-R-cWW
  • History status: Updated, 1 parent
  • Name: Single, unpaired intercalated base, consensus A
551
6
  • IL_44540.5
IL_44540.5
  • Basepair signature: cWW-cSH-tHS-cWW
  • History status: Updated, 1 parent
  • Name: Sugar-edge, 1-base platform, consensus tHS
545
7
  • IL_87904.6
IL_87904.6
  • Basepair signature: cWW-tSH-tHS-tHS-cWW
  • History status: Updated, 1 parent
  • Name: Triple sheared (tSH-tHS-tHS) no inserted bases
1032
8
  • IL_82444.2
IL_82444.2
  • Basepair signature: cWW-cWH-cWW
  • History status: Updated, 2 parents
  • Name: cWW AG or UU | cWH basepair with syn base | cWH basepair with syn base | cWH basepair with syn base | cWW AG or water inserted cWW Y-Y. | Single sheared (tHS) with bulged bases. LSU Helix 75 (H75) | 16S h34 ILa : Part of larger motif
628
9
  • IL_13959.5
IL_13959.5
  • Basepair signature: cWW-tSH-tHS-cWW
  • History status: Updated, 1 parent
  • Name: Double Sheared (tSH-tHS)
827
10
  • IL_73276.6
IL_73276.6
  • Basepair signature: cWW-tSW-tWH-cSH-cWS-cWW
  • History status: Updated, 1 parent
  • Name: C-loop
724
11
  • IL_28947.3
IL_28947.3
  • Basepair signature: cWW-cWW
  • History status: Updated, 1 parent
  • Name: 23S H91 IL | cWW-bulge-cWW | 16S h19 IL and 23S H41 IL | cWW-bulge-cWW | LSU H77 | cWW-bulge-cWW | 16S h19 IL and 23S H41 IL | cWW-bulge-cWW
524
12
  • IL_65553.9
IL_65553.9
  • Basepair signature: cWW-cSS-tSS-L-tSH-tSS-tHS-tHW-cWW-tHS-cWW
  • History status: Updated, 1 parent
  • Name: Kink-turn
1323
13
  • IL_93424.5
IL_93424.5
  • Basepair signature: cWW-tSH-R-tHW-cWW
  • History status: Updated, 1 parent
  • Name: tSH-inserted-tHW
922
14
  • IL_92027.4
IL_92027.4
  • Basepair signature: cWW-cSH-cSW-cWW
  • History status: Updated, 1 parent
  • Name: 16S h21 S8 binding site
619
15
  • IL_85647.4
IL_85647.4
  • Basepair signature: cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW
  • History status: Updated, 1 parent
  • Name: Sarcin-ricin parent motif with 15 Nts
1518
16
  • IL_55938.5
IL_55938.5
  • Basepair signature: cWW-cSH-cWW-cWW
  • History status: Updated, 1 parent
  • Name: LSU Helix 89 (H89) IL2. cSH Platform.
717
17
  • IL_24982.6
IL_24982.6
  • Basepair signature: cWW-tSH-tHW-tHS-cWW
  • History status: Updated, 1 parent
  • Name: SSU helix 20 (h20) IL. Prokaryal 5S Loop E Sub-motif
1016
18
  • IL_37056.1
IL_37056.1
  • Basepair signature: cWW-cWW
  • History status: > 2 parents
  • Name: 1-3 bulged nucleotides, same chain | 16S h19 IL and 23S H41 IL | cWW-bulge-cWW | 16S h19 IL and 23S H41 IL | cWW-bulge-cWW | 16S h19 IL and 23S H41 IL | cWW-bulge-cWW
516
19
  • IL_49493.5
IL_49493.5
  • Basepair signature: cWW-tSH-tHH-cSH-tWH-tHS-cWW
  • History status: Updated, 1 parent
  • Name: Sarcin-ricin Parent Motif - bacterial LSU H95 IL
1315
20
  • IL_67813.1
IL_67813.1
  • Basepair signature: cWW-cWS-cWW
  • History status: > 2 parents
  • Name: cWW AG or water inserted cWW Y-Y. | Single sheared (tHS) with bulged bases. LSU Helix 75 (H75) | 16S h34 ILa : Part of larger motif | cWW AG or UU | Single sheared (tHS) with bulged bases. LSU Helix 75 (H75) | cWW AG or UU | cWH basepair with syn base | Single sheared (tHS) with bulged bases. LSU Helix 75 (H75) | 16S h34 ILa : Part of larger motif | 16S h34 ILa : Part of larger motif
615
21
  • IL_94430.6
IL_94430.6
  • Basepair signature: cWW-cSW-cWW
  • History status: Updated, 1 parent
  • Name: 16S h32-h33-h34 3WJ
514
22
  • IL_46648.7
IL_46648.7
  • Basepair signature: cWW-tSH-cWW
  • History status: Updated, 1 parent
  • Name: 23S H91 IL | Single-Base Intercalation Site
514
23
  • IL_43124.3
IL_43124.3
  • Basepair signature: cWW-cSH-tHS-cWW
  • History status: Updated, 1 parent
  • Name: 23S H73 ILa : Part of larger Motif | Single sheared with bulged bases
713
24
  • IL_37104.4
IL_37104.4
  • Basepair signature: cWW-tHS-cWW
  • History status: Updated, 1 parent
  • Name: Single sheared with bulged bases | Single sheared (tHS) with bulged bases. LSU Helix 75 (H75) | 23S H73 ILa : Part of larger Motif | Single sheared with bulged bases | Single sheared with bulged bases | Single sheared (tHS) with bulged bases. LSU Helix 75 (H75)
713
25
  • IL_31555.6
IL_31555.6
  • Basepair signature: cWW-cWW-tSH-tHS-cWW
  • History status: Updated, 2 parents
  • Name: Tandem sheared with inserted, unpaired purine. | Leadzyme Motif. SSU Decoding site motif, extended. | cWW-L-cWW-cWW | Leadzyme Motif. LSU H101 IL2. SSU Decoding site. | Tandem sheared with inserted, unpaired purine. | cHS-cWS triple and Wobble. SSU Helix 44 (h44) IL1.
913
26
  • IL_24546.5
IL_24546.5
  • Basepair signature: cWW-L-L-L-cSH-L-cWW
  • History status: Updated, 1 parent
  • Name: 23S H41 IL and 16S h18 IL : Has large bulge on one side
1010
27
  • IL_58291.5
IL_58291.5
  • Basepair signature: cWW-L-L-cWW
  • History status: Updated, 1 parent
  • Name: Recurrent Sub-motif found in junctions
610
28
  • IL_02809.3
IL_02809.3
  • Basepair signature: cWW-cWW-cWW-cWW
  • History status: Exact match
  • Name: REV element IL with syn G | Tandem cWW pairs (Not AU or GC)
89
29
  • IL_47444.3
IL_47444.3
  • Basepair signature: cWW-tSH-tWH-tHW-tHS-cWW-cWW
  • History status: Exact match
  • Name: SRP Loop E-like motif
129
30
  • IL_92114.3
IL_92114.3
  • Basepair signature: cWW-cSH-tHW-L-cWW
  • History status: Exact match
  • Name: GAAA loop receptor "platform" motif
99
31
  • IL_71837.1
IL_71837.1
  • Basepair signature: cWW-cWW-cWW
  • History status: > 2 parents
  • Name: cWW AG or UU | Single sheared (tHS) with bulged bases. LSU Helix 75 (H75) | 16S h34 ILa : Part of larger motif | cWW AG or UU | Single sheared (tHS) with bulged bases. LSU Helix 75 (H75) | cWH basepair with syn base | cWW AG or water inserted cWW Y-Y. | Single sheared (tHS) with bulged bases. LSU Helix 75 (H75) | 16S h34 ILa : Part of larger motif | Single sheared (tHS) with bulged bases. LSU Helix 75 (H75) | 16S h34 ILa : Part of larger motif | cWW AG or UU | Single sheared (tHS) with bulged bases. LSU Helix 75 (H75) | cWW AG or UU | Single sheared (tHS) with bulged bases. LSU Helix 75 (H75) | cWW AG or UU | Single sheared (tHS) with bulged bases. LSU Helix 75 (H75)
78
32
  • IL_65554.1
IL_65554.1
  • Basepair signature: cWW-cWW-cSW-cWW-cSH-cWW
  • History status: > 2 parents
  • Name: cHS-cWS triple and Wobble. SSU Helix 44 (h44) IL1. | Tandem sheared with inserted, unpaired purine. | Leadzyme Motif. SSU Decoding site motif, extended. | cWW-L-cWW-cWW | Leadzyme Motif. LSU H101 IL2. SSU Decoding site. | Tandem sheared with inserted, unpaired purine. | cHS-cWS triple and Wobble. SSU Helix 44 (h44) IL1.
98
33
  • IL_74856.1
IL_74856.1
  • Basepair signature: cWW-cWW-cSH-R-cWW
  • History status: New id, 2 parents
  • Name: LSU Helix 89 (H89) IL2
88
34
  • IL_55214.1
IL_55214.1
  • Basepair signature: cWW-cSW-R-cWW
  • History status: New id, 2 parents
  • Name: Leadzyme Motif. SSU Decoding site motif, extended. | cWW-L-cWW-cWW | Leadzyme Motif. LSU H101 IL2. SSU Decoding site.
78
35
  • IL_53635.4
IL_53635.4
  • Basepair signature: cWW-R-tHW-tHW-tWW-cWW
  • History status: Updated, 1 parent
  • Name: LSU Helix 32 (H32) IL
137
36
  • IL_08926.4
IL_08926.4
  • Basepair signature: cWW-cHH-cWW
  • History status: Updated, 1 parent
  • Name: 23S H91 IL
57
37
  • IL_64847.1
IL_64847.1
  • Basepair signature: cWW-tSH-tWH-tSH-tHS-cWW
  • History status: New id, 1 parent
  • Name: Double-sheared with two unpaired, stacked As. LSU Helix 68 IL4.
107
38
  • IL_97057.4
IL_97057.4
  • Basepair signature: cWW-cWW-tWH-L-tHS-cWW
  • History status: Updated, 1 parent
117
39
  • IL_73000.2
IL_73000.2
  • Basepair signature: cWW-cSW-cSH-cWW
  • History status: Exact match
  • Name: cHS-cWS
67
40
  • IL_92321.4
IL_92321.4
  • Basepair signature: cWW-cWW-tSH-tHS-tHS-cWW
  • History status: Exact match
  • Name: Triple sheared (tSH-tHS-tHS) with cWW Wobble base flanking motif
127
41
  • IL_13069.4
IL_13069.4
  • Basepair signature: cWW-cWW
  • History status: Updated, 1 parent
  • Name: LSU 3WJ H32-H33-H35A
86
42
  • IL_86357.4
IL_86357.4
  • Basepair signature: cWW-tWW-cWW
  • History status: Updated, 1 parent
  • Name: LSU Helix 61 IL2
66
43
  • IL_72158.4
IL_72158.4
  • Basepair signature: cWW-tSH-tSH-tHH-tHS-cWW
  • History status: Updated, 1 parent
  • Name: LSU Helix 62 (H62) IL
136
44
  • IL_25230.4
IL_25230.4
  • Basepair signature: cWW-tSH-tHW-bif-L-R-bif-tWH-tHS-cWW
  • History status: Updated, 1 parent
  • Name: Bacterial 5S rRNA Loop E
186
45
  • IL_93568.3
IL_93568.3
  • Basepair signature: cWW-tSH-tHS-tHS-L-R-cWW
  • History status: Updated, 1 parent
  • Name: Triple Sheared (tSH-tHS-tHS) with wobble cWW.
126
46
  • IL_70237.4
IL_70237.4
  • Basepair signature: cWW-L-L-cWS-tSW-R-R-cWW
  • History status: Updated, 1 parent
106
47
  • IL_77263.2
IL_77263.2
  • Basepair signature: cWW-tSS-L-tSH-tHS-cWW
  • History status: Exact match
  • Name: Kink-turn from U4
116
48
  • IL_09530.2
IL_09530.2
  • Basepair signature: cWW-cWH-L-R-cWW
  • History status: Updated, 2 parents
  • Name: Double S-turn motif
95
49
  • IL_44067.5
IL_44067.5
  • Basepair signature: cWW-L-R-tSH-tSH-tHS-cWW-cWW
  • History status: Updated, 1 parent
  • Name: Quadruple sheared (tSH-tHS-tHS-tHS). LSU Helix 2 (H2).
145
50
  • IL_46960.1
IL_46960.1
  • Basepair signature: cWW-R-cWW
  • History status: New id, 2 parents
  • Name: 16S h19 IL and 23S H41 IL | cWW-bulge-cWW | 16S h19 IL and 23S H41 IL | cWW-bulge-cWW
55
51
  • IL_59864.1
IL_59864.1
  • Basepair signature: cWW-L-L-L-tHS-cWW
  • History status: New id, 1 parent
95
52
  • IL_48183.1
IL_48183.1
  • Basepair signature: cWW-tWH-tHS-cWW
  • History status: New id, 1 parent
  • Name: tSH-tHW-bulge
95
53
  • IL_04397.1
IL_04397.1
  • Basepair signature: cWW-tWH-L-tHW-cSH-cWW
  • History status: New id, 1 parent
125
54
  • IL_90133.4
IL_90133.4
  • Basepair signature: cWW-tHS-cWW-cWW
  • History status: Updated, 2 parents
75
55
  • IL_71229.1
IL_71229.1
  • Basepair signature: cWW-cSS-tSS-tHH-tWW-tHH-tHS-cWW
  • History status: New id, 1 parent
165
56
  • IL_82133.1
IL_82133.1
  • Basepair signature: cWW-L-R-cWS-cWW
  • History status: New id, 2 parents
  • Name: SSU Decoding Site -- Human. Bulge-cSW-tHS | Leadzyme Motif. SSU Decoding site motif, extended. | cWW-L-cWW-cWW | Leadzyme Motif. LSU H101 IL2. SSU Decoding site. | Tandem sheared with inserted, unpaired purine. | cHS-cWS triple and Wobble. SSU Helix 44 (h44) IL1.
95
57
  • IL_02359.4
IL_02359.4
  • Basepair signature: cWW-tSS-tHH-cSW-bif-tSH-tWH-R-R-tHS-cWW
  • History status: Updated, 1 parent
165
58
  • IL_79083.4
IL_79083.4
  • Basepair signature: cWW-tSH-L-R-L-tHH-cWW
  • History status: Updated, 1 parent
115
59
  • IL_16029.1
IL_16029.1
  • Basepair signature: cWW-cWW-cWW
  • History status: > 2 parents
  • Name: cWW AG or water inserted cWW Y-Y. | Single sheared (tHS) with bulged bases. LSU Helix 75 (H75) | 16S h34 ILa : Part of larger motif | cWW AG or UU | Single sheared (tHS) with bulged bases. LSU Helix 75 (H75)
65
60
  • IL_31066.3
IL_31066.3
  • Basepair signature: cWW-R-cWW
  • History status: Exact match
  • Name: SSU Helix 44 (h44) extension
74
61
  • IL_39526.4
IL_39526.4
  • Basepair signature: cWW-L-L-L-L-L-cWW
  • History status: Exact match
94
62
  • IL_01080.1
IL_01080.1
  • Basepair signature: cWW-R-cWW
  • History status: Exact match
74
63
  • IL_55114.1
IL_55114.1
  • Basepair signature: cWW-L-R-tHS-cWW
  • History status: New id, 1 parent
  • Name: tHS tHH bulge with S-turn | Double S-turn motif
94
64
  • IL_66654.1
IL_66654.1
  • Basepair signature: cWW-L-R-cWW
  • History status: > 2 parents
  • Name: Single sheared (tHS) with bulged bases. LSU Helix 75 (H75) | 16S h34 ILa : Part of larger motif | cWW AG or UU | Single sheared (tHS) with bulged bases. LSU Helix 75 (H75) | Single sheared (tHS) with bulged bases. LSU Helix 75 (H75) | 16S h34 ILa : Part of larger motif | cWW AG or UU | Single sheared (tHS) with bulged bases. LSU Helix 75 (H75) | cWW AG or UU | Single sheared (tHS) with bulged bases. LSU Helix 75 (H75)
64
65
  • IL_95652.3
IL_95652.3
  • Basepair signature: cWW-tSH-tHH-cSH-tWH-tHS-L-cWW
  • History status: Exact match
  • Name: SSU Helix 27 (h27) IL Sarcin-Ricin motif
144
66
  • IL_47758.2
IL_47758.2
  • Basepair signature: cWW-cHW-cWW-cWW
  • History status: Exact match
  • Name: REV element IL with syn G | Tandem cWW pairs (Not AU or GC)
84
67
  • IL_16166.5
IL_16166.5
  • Basepair signature: cWW-L-cWW
  • History status: Updated, 1 parent
  • Name: 23S H91 IL
54
68
  • IL_22732.1
IL_22732.1
  • Basepair signature: cWW-tSH-tWH-tHS-cWW
  • History status: Exact match
  • Name: tSH-inserted-tHS
94
69
  • IL_39980.1
IL_39980.1
  • Basepair signature: cWW-L-cSH-cWW
  • History status: Exact match
84
70
  • IL_56594.1
IL_56594.1
  • Basepair signature: cWW-cWW-cWW
  • History status: New id, 1 parent
  • Name: cWW AG or UU
64
71
  • IL_48918.3
IL_48918.3
  • Basepair signature: cWW-tSH-tSH-tHS-tSS-R-cWW
  • History status: Exact match
  • Name: Kink-turn variant
134
72
  • IL_15123.1
IL_15123.1
  • Basepair signature: cWW-L-R-cHW-L-L-L-L-L-cWW
  • History status: New id, 1 parent
  • Name: Part of Helix 71 (H71) junction in 23S rRNA E.c. H.m. and Tetrahymena | Part of H71 junction in 23S rRNA from T.th.
164
73
  • IL_32261.1
IL_32261.1
  • Basepair signature: cWW-R-R-tHS-cWW
  • History status: > 2 parents
  • Name: LSU Helix 89 (H89) IL2
84
74
  • IL_28572.2
IL_28572.2
  • Basepair signature: cWW-R-R-tWH-cSW-L-R-R-L-tHS-cWW
  • History status: Exact match
  • Name: 16S h18 kink-turn like motif
164
75
  • IL_87065.2
IL_87065.2
  • Basepair signature: cWW-R-cWW
  • History status: Updated, 1 parent
  • Name: 23S H91 IL | Single-Base Intercalation Site
74
76
  • IL_08763.1
IL_08763.1
  • Basepair signature: cWW-cWW
  • History status: New id, 2 parents
  • Name: LSU H77 | cWW-bulge-cWW | 16S h19 IL and 23S H41 IL | cWW-bulge-cWW | cWW-bulge-cWW | 16S h19 IL and 23S H41 IL | cWW-bulge-cWW | 16S h19 IL and 23S H41 IL
54
77
  • IL_34363.2
IL_34363.2
  • Basepair signature: cWW-cSS-tSS-L-tSH-tSS-L-R-R-L-cWW
  • History status: Exact match
  • Name: Kink-turn from 23S H42
144
78
  • IL_82188.2
IL_82188.2
  • Basepair signature: cWW-tSH-L-R-R-R-R-L-L-L-cWW
  • History status: Exact match
  • Name: LSU H68 IL from H.m.
144
79
  • IL_42251.1
IL_42251.1
  • Basepair signature: cWW-L-cSH-cWW
  • History status: Exact match
64
80
  • IL_31663.1
IL_31663.1
  • Basepair signature: cWW-cWW-L-cWW
  • History status: Exact match
  • Name: 23S H73 ILa : Part of larger Motif
74
81
  • IL_43946.1
IL_43946.1
  • Basepair signature: cWW-tSH-tSS-tSS-R-R-R-R-cWW
  • History status: Exact match
123
82
  • IL_74876.2
IL_74876.2
  • Basepair signature: cWW-tWH-L-R-tHS-cWW
  • History status: Exact match
  • Name: Double-sheared with two unpaired, stacked As. LSU Helix 68 IL4.
103
83
  • IL_30840.2
IL_30840.2
  • Basepair signature: cWW-cWW-L-cWW-cWW-cWW
  • History status: Exact match
113
84
  • IL_95908.1
IL_95908.1
  • Basepair signature: cWW-cWW
  • History status: New id, 2 parents
  • Name: LSU H77 | cWW-bulge-cWW | 16S h19 IL and 23S H41 IL | cWW-bulge-cWW | cWW-bulge-cWW | 16S h19 IL and 23S H41 IL | cWW-bulge-cWW | cWW-bulge-cWW | 16S h19 IL and 23S H41 IL | cWW-bulge-cWW
53
85
  • IL_05723.2
IL_05723.2
  • Basepair signature: cWW-R-cSH-tWH-tHS-cWW
  • History status: Updated, 1 parent
103
86
  • IL_37053.1
IL_37053.1
  • Basepair signature: cWW-tSH-tSH-tHS-tSS-L-R-cWW
  • History status: Exact match
  • Name: Kink-turn from 23S H58
133
87
  • IL_89252.1
IL_89252.1
  • Basepair signature: cWW-L-R-R-R-L-tHW-L-R-cWW
  • History status: New id, 1 parent
133
88
  • IL_06211.3
IL_06211.3
  • Basepair signature: cWW-L-R-L-cWW
  • History status: Exact match
93
89
  • IL_07300.2
IL_07300.2
  • Basepair signature: cWW-cSH-L-cWW-cWW
  • History status: Exact match
93
90
  • IL_72641.1
IL_72641.1
  • Basepair signature: cWW-L-R-cWW
  • History status: New id, 1 parent
  • Name: cWW AG or UU | cWH basepair with syn base | Single sheared (tHS) with bulged bases. LSU Helix 75 (H75) | 16S h34 ILa : Part of larger motif
63
91
  • IL_37171.1
IL_37171.1
  • Basepair signature: cWW-cWW-tSH-L-R-cWW-cWW
  • History status: New id, 2 parents
  • Name: LSU H58 IL2 H.m.
123
92
  • IL_58586.3
IL_58586.3
  • Basepair signature: cWW-R-R-cWW
  • History status: Updated, 1 parent
63
93
  • IL_69536.2
IL_69536.2
  • Basepair signature: cWW-tSH-R-R-cWW
  • History status: Updated, 1 parent
  • Name: LSU Helix 96 (H96) IL2
103
94
  • IL_67887.2
IL_67887.2
  • Basepair signature: cWW-tSH-cWW
  • History status: Updated, 1 parent
53
95
  • IL_25271.2
IL_25271.2
  • Basepair signature: cWW-cWW-tWH-tWH-tHW-tHW-cWW
  • History status: Exact match
  • Name: SSU Helix 8 (h8) IL E.c. and Yeast
153
96
  • IL_69106.2
IL_69106.2
  • Basepair signature: cWW-L-cWW-cWW
  • History status: Updated, 2 parents
  • Name: Leadzyme Motif. SSU Decoding site motif, extended. | cWW-L-cWW-cWW | Leadzyme Motif. SSU Decoding site motif, extended. | cWW-L-cWW-cWW | Leadzyme Motif. LSU H101 IL2. SSU Decoding site.
73
97
  • IL_97509.2
IL_97509.2
  • Basepair signature: cWW-L-R-cWW-cWW-cWW
  • History status: Updated, 1 parent
  • Name: Double sheared with wobble cWW.
103
98
  • IL_80348.3
IL_80348.3
  • Basepair signature: cWW-R-cWW
  • History status: Exact match
  • Name: 23S H91 IL
53
99
  • IL_34628.2
IL_34628.2
  • Basepair signature: cWW-tSS-L-tSH-tHS-cWW-cWW
  • History status: Exact match
  • Name: Kink-turn
133
100
  • IL_62499.8
IL_62499.8
  • Basepair signature: cWW-R-cWW
  • History status: Updated, 2 parents
63
101
  • IL_98421.5
IL_98421.5
  • Basepair signature: cWW-R-R-R-cWW
  • History status: Updated, 2 parents
  • Name: SSU Helix 12 (h12) IL | SSU Helix 12 (h12) IL | LSU Eukaryal Helix 96 (H96) IL1
73
102
  • IL_52173.1
IL_52173.1
  • Basepair signature: cWW-L-R-R-R-L-cWW
  • History status: Exact match
93
103
  • IL_79955.2
IL_79955.2
  • Basepair signature: cWW-cWW-cWW-cWW-cSW-cWW
  • History status: Exact match
  • Name: SSU Helix (23) h23 IL1
123
104
  • IL_94403.6
IL_94403.6
  • Basepair signature: cWW-L-L-tWH-L-L-L-cWW
  • History status: Updated, 1 parent
  • Name: LSU H77
123
105
  • IL_82563.1
IL_82563.1
  • Basepair signature: cWW-R-tWH-R-R-R-cWW
  • History status: Exact match
  • Name: Thi-box riboswitch T-loop
103
106
  • IL_06180.1
IL_06180.1
  • Basepair signature: cWW-R-tWH-tHS-cWW
  • History status: Exact match
  • Name: tHS tHH bulge with S-turn
103
107
  • IL_16977.1
IL_16977.1
  • Basepair signature: cWW-tSS-L-cSS-R-L-cWW
  • History status: New id, 2 parents
132
108
  • IL_16415.3
IL_16415.3
  • Basepair signature: cWW-L-R-R-L-tWH-tHS-tSS-tSS-R-cWW
  • History status: Updated, 1 parent
  • Name: SSU Helix 23 (h23) Kink-turn T. thermophilus
152
109
  • IL_77076.1
IL_77076.1
  • Basepair signature: cWW-tSH-tSS-tSS-tWH-tWH-R-R-R-R-R-R-cWW
  • History status: Exact match
182
110
  • IL_80093.1
IL_80093.1
  • Basepair signature: cWW-L-R-tHH-tHS-cWW
  • History status: Exact match
112
111
  • IL_39175.1
IL_39175.1
  • Basepair signature: cWW-R-R-R-R-R-cWW
  • History status: New id, 1 parent
92
112
  • IL_12204.1
IL_12204.1
  • Basepair signature: cWW-L-R-R-L-L-L-cWW
  • History status: New id, 2 parents
142
113
  • IL_31707.1
IL_31707.1
  • Basepair signature: cWW-L-L-L-cWW-L-bif-cWW
  • History status: Exact match
  • Name: Vitamin B12 aptamer
112
114
  • IL_50521.1
IL_50521.1
  • Basepair signature: cWW-tSH-cWH-tWH-tSS-tHW-L-cWW
  • History status: Exact match
152
115
  • IL_11751.1
IL_11751.1
  • Basepair signature: cWW-L-L-L-cWW
  • History status: Exact match
72
116
  • IL_90057.1
IL_90057.1
  • Basepair signature: cWW-tSS-L-L-cSS-tWH-tSW-cWS-cSS-tWS-cSH-cWH-cHW-cSH-R-R-cWW
  • History status: Exact match
252
117
  • IL_80494.3
IL_80494.3
  • Basepair signature: cWW-tWH-L-R-tHS-bif-cWW
  • History status: Updated, 1 parent
  • Name: LSU H58 IL2 H.m.
132
118
  • IL_16330.1
IL_16330.1
  • Basepair signature: cWW-cWW-L-R-R-R-R-R-R-R-R-R-L-L-L-L-L-tHH-tHS-cWW
  • History status: Exact match
282
119
  • IL_87548.1
IL_87548.1
  • Basepair signature: cWW-tSH-tHW-L-cSH-R-cWW
  • History status: Exact match
112
120
  • IL_09882.1
IL_09882.1
  • Basepair signature: cWW-tSH-tHW-tWH-tHS-cWW
  • History status: Exact match
122
121
  • IL_21495.1
IL_21495.1
  • Basepair signature: cWW-L-R-R-R-tHW-tHW-bif-cWW
  • History status: Exact match
152
122
  • IL_92576.1
IL_92576.1
  • Basepair signature: cWW-L-R-cWW
  • History status: New id, 1 parent
92
123
  • IL_12147.1
IL_12147.1
  • Basepair signature: cWW-L-R-cWW
  • History status: Exact match
  • Name: Single sheared with bulged bases | Single sheared (tHS) with bulged bases. LSU Helix 75 (H75)
62
124
  • IL_46435.1
IL_46435.1
  • Basepair signature: cWW-L-L-L-L-L-L-L-L-L-cWW
  • History status: Exact match
132
125
  • IL_09587.1
IL_09587.1
  • Basepair signature: cWW-cWW-L-R-R-L-L-cWW
  • History status: Exact match
112
126
  • IL_67024.1
IL_67024.1
  • Basepair signature: cWW-R-R-R-tSW-L-cWW
  • History status: New id, 2 parents
112
127
  • IL_28003.2
IL_28003.2
  • Basepair signature: cWW-cSH-tHW-cWW
  • History status: Updated, 1 parent
92
128
  • IL_30381.1
IL_30381.1
  • Basepair signature: cWW-cWW-L-R-cWW
  • History status: Exact match
  • Name: tHS tHH bulge with S-turn
82
129
  • IL_94744.1
IL_94744.1
  • Basepair signature: cWW-cWW-L-R-tSH-tHH-cSH-tWH-tHS-cWW
  • History status: Exact match
  • Name: Sarcin-ricin motif with extra cWW GA pair
172
130
  • IL_23414.1
IL_23414.1
  • Basepair signature: cWW-L-R-R-R-cSH-R-bif-tWH-R-R-R-R-R-L-cWW
  • History status: Exact match
212
131
  • IL_90735.1
IL_90735.1
  • Basepair signature: cWW-cWW-L-R-R-R-R-L-L-L-L-L-cWW
  • History status: Exact match
172
132
  • IL_97833.1
IL_97833.1
  • Basepair signature: cWW-cSW-tSH-tWH-tHW-tHS-cWW-cWW
  • History status: Exact match
142
133
  • IL_90877.1
IL_90877.1
  • Basepair signature: cWW-L-R-L-cWW
  • History status: New id, 1 parent
82
134
  • IL_37197.1
IL_37197.1
  • Basepair signature: cWW-L-L-L-tHS-cWW-cWW
  • History status: Exact match
112
135
  • IL_65137.1
IL_65137.1
  • Basepair signature: cWW-L-cSS-tWH-tHW-L-cWW-cWW
  • History status: Exact match
  • Name: Kink-turn like motif in Group I Intron
132
136
  • IL_92422.1
IL_92422.1
  • Basepair signature: cWW-L-L-L-L-cWW
  • History status: New id, no parents
112
137
  • IL_76095.3
IL_76095.3
  • Basepair signature: cWW-cWW-tSH-R-tHW-tHW-tWH-L-cWW-cWW
  • History status: Exact match
  • Name: Motif from Hairpin Ribozyme
202
138
  • IL_98566.1
IL_98566.1
  • Basepair signature: cWW-L-R-R-R-cWW
  • History status: Exact match
82
139
  • IL_43545.1
IL_43545.1
  • Basepair signature: cWW-cWW-L-R-L-cWW
  • History status: New id, 1 parent
  • Name: Leadzyme Motif. SSU Decoding site motif, extended. | cWW-L-cWW-cWW | Leadzyme Motif. LSU H101 IL2. SSU Decoding site. | Tandem sheared with inserted, unpaired purine. | cHS-cWS triple and Wobble. SSU Helix 44 (h44) IL1.
92
140
  • IL_25541.1
IL_25541.1
  • Basepair signature: cWW-tSH-L-R-R-R-L-cWW
  • History status: New id, 1 parent
  • Name: Triple Sheared with unpaired, inserted A
112
141
  • IL_60613.1
IL_60613.1
  • Basepair signature: cWW-L-R-R-R-cWW
  • History status: New id, 1 parent
82
142
  • IL_45794.1
IL_45794.1
  • Basepair signature: cWW-L-R-R-tWW-tWW-cWW
  • History status: Exact match
142
143
  • IL_96446.1
IL_96446.1
  • Basepair signature: cWW-R-R-tWH-L-R-cWW
  • History status: Exact match
112
144
  • IL_30534.1
IL_30534.1
  • Basepair signature: cWW-R-R-cWW
  • History status: New id, 2 parents
62
145
  • IL_52940.1
IL_52940.1
  • Basepair signature: cWW-L-R-R-R-R-L-L-L-tWW-cWW
  • History status: Exact match
142
146
  • IL_12211.1
IL_12211.1
  • Basepair signature: cWW-L-R-R-R-L-L-cWW-cWW
  • History status: Exact match
132
147
  • IL_87064.1
IL_87064.1
  • Basepair signature: cWW-L-R-L-tHS-cWW
  • History status: New id, 1 parent
  • Name: tHS tHH bulge with S-turn
92
148
  • IL_70401.1
IL_70401.1
  • Basepair signature: cWW-L-L-tWW-L-L-L-cWW
  • History status: Exact match
112
149
  • IL_78744.1
IL_78744.1
  • Basepair signature: cWW-tSH-tSH-tHS-tHS-cWW
  • History status: Exact match
  • Name: Quadruple Sheared (tSH-tSH-tHS-tHS)
122
150
  • IL_40892.1
IL_40892.1
  • Basepair signature: cWW-L-L-L-L-cWW
  • History status: Exact match
112
151
  • IL_21639.1
IL_21639.1
  • Basepair signature: cWW-L-tWH-R-R-R-cWW
  • History status: Exact match
92
152
  • IL_33842.1
IL_33842.1
  • Basepair signature: cWW-cSH-L-cWS-cWW
  • History status: Exact match
92
153
  • IL_95150.7
IL_95150.7
  • Basepair signature: cWW-cHW-tHS-cWW
  • History status: Updated, 1 parent
82
154
  • IL_05641.1
IL_05641.1
  • Basepair signature: cWW-tWW-L-tWH-R-R-R-R-R-R-R-tHH-tHS-cWW
  • History status: New id, 1 parent
232
155
  • IL_26868.1
IL_26868.1
  • Basepair signature: cWW-tSH-tHW-tWW-cWW
  • History status: Exact match
111
156
  • IL_20775.1
IL_20775.1
  • Basepair signature: cWW-R-tHS-cWW
  • History status: Exact match
  • Name: tSH-inserted
81
157
  • IL_88367.1
IL_88367.1
  • Basepair signature: cWW-bif-R-cSH-tWH-tHS-L-R-tSH-cWW
  • History status: Exact match
151
158
  • IL_05513.1
IL_05513.1
  • Basepair signature: cWW-L-L-L-tWH-L-L-L-cWW
  • History status: Exact match
121
159
  • IL_91044.1
IL_91044.1
  • Basepair signature: cWW-L-R-tHW-cWW
  • History status: Exact match
111
160
  • IL_86059.1
IL_86059.1
  • Basepair signature: cWW-cWW
  • History status: Exact match
71
161
  • IL_80505.1
IL_80505.1
  • Basepair signature: cWW-L-R-R-R-R-R-R-cWW
  • History status: Exact match
111
162
  • IL_55649.1
IL_55649.1
  • Basepair signature: cWW-tWH-L-R-cWW
  • History status: Exact match
91
163
  • IL_91904.1
IL_91904.1
  • Basepair signature: cWW-L-R-R-L-L-cSS-L-cWW-cWW
  • History status: Exact match
171
164
  • IL_52610.1
IL_52610.1
  • Basepair signature: cWW-tSS-tSH-L-L-L-L-cWW-L-L-L-L-L-L-L-L-cSS-L-L-L-cSW-cWW-L-cWW-R-tSH-R-R-R-R
  • History status: Exact match
371
165
  • IL_76263.1
IL_76263.1
  • Basepair signature: cWW-tHW-L-R-R-R-L-L-L-L-L-L-L-cWW
  • History status: Exact match
191
166
  • IL_11302.1
IL_11302.1
  • Basepair signature: cWW-L-R-R-tHW-L-cWW
  • History status: Exact match
101
167
  • IL_06808.1
IL_06808.1
  • Basepair signature: cWW-tSH-tHS-cWW
  • History status: Exact match
  • Name: Double sheared (tSH-tSH) one bulged base.
91
168
  • IL_40527.1
IL_40527.1
  • Basepair signature: cWW-L-R-tSS-L-tSH-L-R-L-cWW-cWW
  • History status: Exact match
  • Name: Kink-turn
161
169
  • IL_03625.1
IL_03625.1
  • Basepair signature: cWW-R-R-cWW
  • History status: New id, no parents
71
170
  • IL_03808.1
IL_03808.1
  • Basepair signature: cWW-R-R-R-R-R-R-R-R-R-cWW
  • History status: New id, no parents
131
171
  • IL_77014.1
IL_77014.1
  • Basepair signature: cWW-L-L-L-tWH-cSH-L-cWW-cWW
  • History status: Exact match
111
172
  • IL_06847.1
IL_06847.1
  • Basepair signature: cWW-R-cSW-R-R-tHS-cWW
  • History status: Exact match
  • Name: Group II Intron IL
131
173
  • IL_82650.1
IL_82650.1
  • Basepair signature: cWW-cWS-tSH-tHS-L-R-L-cWW
  • History status: Exact match
131
174
  • IL_09491.1
IL_09491.1
  • Basepair signature: cWW-L-L-L-cWW
  • History status: Exact match
81
175
  • IL_87394.1
IL_87394.1
  • Basepair signature: cWW-L-R-R-R-R-R-cWW
  • History status: Exact match
101
176
  • IL_68827.1
IL_68827.1
  • Basepair signature: cWW-tSH-tHH-R-R-R-cWW
  • History status: Exact match
  • Name: Reverse Kink-Turn
111
177
  • IL_66744.1
IL_66744.1
  • Basepair signature: cWW-L-R-R-L-L-L-L-cWW-cWW
  • History status: Exact match
  • Name: SSU Helix 21 (h21) IL2 E.coli
141
178
  • IL_54450.1
IL_54450.1
  • Basepair signature: cWW-L-R-cWW-cWW
  • History status: Exact match
81
179
  • IL_54954.1
IL_54954.1
  • Basepair signature: cWW-L-R-tSH-tHW-tHH-tHS-cWW-cWW
  • History status: Exact match
  • Name: Sarcin-Ricin with extra tSH UA basepair. Yeast LSU H11.
171
180
  • IL_41139.1
IL_41139.1
  • Basepair signature: cWW-L-R-L-cWW
  • History status: Exact match
81
181
  • IL_23302.1
IL_23302.1
  • Basepair signature: cWW-R-R-R-R-cWW
  • History status: New id, no parents
91
182
  • IL_75328.1
IL_75328.1
  • Basepair signature: cWW-L-R-R-R-L-L-cSS-tSS-cWW
  • History status: Exact match
141
183
  • IL_46306.1
IL_46306.1
  • Basepair signature: cWW-L-R-R-cWW-cWW
  • History status: Exact match
101
184
  • IL_60649.1
IL_60649.1
  • Basepair signature: cWW-cSS-L-L-L-tSS-tHW-L-R-cWW
  • History status: Exact match
  • Name: Kink-turn
131
185
  • IL_25307.1
IL_25307.1
  • Basepair signature: cWW-tHH-L-R-L-cWW
  • History status: Exact match
91
186
  • IL_28644.1
IL_28644.1
  • Basepair signature: cWW-R-cWW
  • History status: Exact match
61
187
  • IL_02957.1
IL_02957.1
  • Basepair signature: cWW-R-R-cWW-tSS-cWW-cWW-L-L-L-L-L-L-L-cWW-cSS-cSS-L-cWW-cWW
  • History status: Exact match
261
188
  • IL_42891.1
IL_42891.1
  • Basepair signature: cWW-L-R-R-L-L-L-cSH-L-L-cWW
  • History status: Exact match
161
189
  • IL_63952.1
IL_63952.1
  • Basepair signature: cWW-L-R-R-tHW-tHW-L-R-cWW
  • History status: Exact match
131
190
  • IL_41791.1
IL_41791.1
  • Basepair signature: cWW-tSW-tWH-tSW-cSH-cWS-R-R-cWW-cWW
  • History status: Exact match
121
191
  • IL_97191.1
IL_97191.1
  • Basepair signature: cWW-cWW-tHH-cSH-tWH-tHS-cWW
  • History status: Exact match
  • Name: Sarcin-ricin motif with cWW UU instead of tSH basepair.
131
192
  • IL_59934.1
IL_59934.1
  • Basepair signature: cWW-tSH-tWH-tHS-R-R-cWW
  • History status: Exact match
  • Name: SSU Helix 23 (h23) Kink-turn E. coli
131
193
  • IL_76486.1
IL_76486.1
  • Basepair signature: cWW-tSH-tSW-tHH-cSH-tWH-tHS-cWW
  • History status: Exact match
  • Name: Sarcin-ricin motif with syn G
151
194
  • IL_54470.1
IL_54470.1
  • Basepair signature: cWW-tHS-tHS-cWW
  • History status: Exact match
  • Name: tHS tHH bulge with S-turn
91
195
  • IL_72293.1
IL_72293.1
  • Basepair signature: cWW-tSH-R-tHH-tHS-cWW
  • History status: New id, no parents
121
196
  • IL_40845.1
IL_40845.1
  • Basepair signature: cWW-cSW-cSH-R-cWW
  • History status: Exact match
81
197
  • IL_25420.1
IL_25420.1
  • Basepair signature: cWW-tSH-tWH-tWH-L-R-R-L-L-tSH-cWW
  • History status: New id, no parents
161
198
  • IL_31006.1
IL_31006.1
  • Basepair signature: cWW-tSH-tHW-L-bif-cWW
  • History status: Exact match
  • Name: tSH-tHW-L-bif-cWW
121
199
  • IL_99937.1
IL_99937.1
  • Basepair signature: cWW-R-R-tWS-L-R-cWW
  • History status: New id, 1 parent
111
200
  • IL_06471.1
IL_06471.1
  • Basepair signature: cWW-cSW-tWH-tSW-cSH-L-cWS-R-cWW
  • History status: Exact match
101
201
  • IL_77296.1
IL_77296.1
  • Basepair signature: cWW-R-R-R-R-R-R-R-R-R-R-cWW
  • History status: Exact match
151
202
  • IL_91379.1
IL_91379.1
  • Basepair signature: cWW-L-R-R-R-R-R-R-L-cWW
  • History status: Exact match
121
203
  • IL_06421.1
IL_06421.1
  • Basepair signature: cWW-tHS-tHS-cWW
  • History status: Exact match
  • Name: Single sheared with bulged bases
81
204
  • IL_06306.1
IL_06306.1
  • Basepair signature: cWW-L-R-R-R-R-R-R-R-L-cWW
  • History status: Exact match
141
205
  • IL_97842.1
IL_97842.1
  • Basepair signature: cWW-R-R-R-R-cWS-cWW-cWW-L-R-cWW
  • History status: Exact match
161
206
  • IL_64213.1
IL_64213.1
  • Basepair signature: cWW-L-R-L-L-cWW
  • History status: New id, 1 parent
  • Name: SSU Helix 12 (h12) IL | LSU Eukaryal Helix 96 (H96) IL1
91
207
  • IL_26448.1
IL_26448.1
  • Basepair signature: cWW-R-R-R-tSW-L-L-cWW
  • History status: New id, no parents
111
208
  • IL_88865.1
IL_88865.1
  • Basepair signature: cWW-L-cSH-L-cWW
  • History status: Exact match
91
209
  • IL_26971.1
IL_26971.1
  • Basepair signature: cWW-tSH-L-R-R-R-L-cWW
  • History status: Exact match
111
210
  • IL_03282.1
IL_03282.1
  • Basepair signature: cWW-tHW-tHS-cWW-cWW
  • History status: Exact match
101
211
  • IL_03110.1
IL_03110.1
  • Basepair signature: cWW-tSH-L-L-L-tHS-cWW-cWW
  • History status: Exact match
131
212
  • IL_80652.1
IL_80652.1
  • Basepair signature: cWW-R-cSH-tWH-tSH-tHS-cWW
  • History status: Exact match
141
213
  • IL_81398.1
IL_81398.1
  • Basepair signature: cWW-L-R-cWW-cWW-cWW
  • History status: Exact match
101
214
  • IL_64589.1
IL_64589.1
  • Basepair signature: cWW-L-R-L-cWW
  • History status: Exact match
81
215
  • IL_63133.1
IL_63133.1
  • Basepair signature: cWW-cWW-cWW
  • History status: Exact match
  • Name: Single sheared with bulged bases | Single sheared (tHS) with bulged bases. LSU Helix 75 (H75)
61
216
  • IL_73656.1
IL_73656.1
  • Basepair signature: cWW-L-R-R-R-L-L-L-L-cWW-cWW
  • History status: New id, no parents
151
217
  • IL_06468.1
IL_06468.1
  • Basepair signature: cWW-tWH-R-R-R-cWW-cWW
  • History status: Exact match
  • Name: 16S h40 3WJ E.c.
111
218
  • IL_37347.1
IL_37347.1
  • Basepair signature: cWW-cHW-L-tHW-tHW-tHW-bif-cWW
  • History status: Exact match
161
219
  • IL_91089.1
IL_91089.1
  • Basepair signature: cWW-L-L-L-L-cWW
  • History status: Exact match
81
220
  • IL_78513.1
IL_78513.1
  • Basepair signature: cWW-L-R-R-R-cWW
  • History status: Exact match
101
221
  • IL_89794.1
IL_89794.1
  • Basepair signature: cWW-tSH-tSH-tSS-tSS-R-cWW
  • History status: Exact match
141
222
  • IL_59529.1
IL_59529.1
  • Basepair signature: cWW-tWH-tHH-tHS-cWW
  • History status: Exact match
111
223
  • IL_94973.1
IL_94973.1
  • Basepair signature: cWW-L-R-L-tHH-cSH-tWH-tHS-cWW
  • History status: Exact match
  • Name: Sarcin-Ricin from Group II Intron with inserted base and poor modeling:
141
224
  • IL_86981.1
IL_86981.1
  • Basepair signature: cWW-bif-tSH-tHW-cSH-tHH-bif-cWW
  • History status: Exact match
  • Name: Sarcin-ricin motif with CC BIfurcated pair. H.m. LSU H18.
151
225
  • IL_31754.1
IL_31754.1
  • Basepair signature: cWW-cSW-tHW-cSH-tWH-tHS-cWW
  • History status: Exact match
  • Name: Sarcin-ricin H95 23S rRNA E.c.
131
226
  • IL_82601.1
IL_82601.1
  • Basepair signature: cWW-cWW-cWW-cWW
  • History status: Exact match
  • Name: Tandem cWW water-inserted CU pairs
81
227
  • IL_16921.1
IL_16921.1
  • Basepair signature: cWW-cSH-L-L-L-cWW-cWW
  • History status: New id, no parents
131
228
  • IL_47687.1
IL_47687.1
  • Basepair signature: cWW-tWH-tWH-tWH-L-R-L-tWW-cWW
  • History status: Exact match
141
229
  • IL_27243.1
IL_27243.1
  • Basepair signature: cWW-cSS-cWH-tSS-cWH-R-tWH-R-cWW
  • History status: Exact match
151
230
  • IL_05221.1
IL_05221.1
  • Basepair signature: cWW-cWW-bif-tHW-cWH-tSW-cSH-cWH-cSH-tHS-cWW
  • History status: Exact match
171
231
  • IL_96920.1
IL_96920.1
  • Basepair signature: cWW-cSH-tWH-L-cWW
  • History status: New id, 1 parent
  • Name: SSU Helix 12 (h12) IL
71
232
  • IL_85805.1
IL_85805.1
  • Basepair signature: cWW-L-R-R-R-cWW
  • History status: Exact match
91
233
  • IL_53988.1
IL_53988.1
  • Basepair signature: cWW-cSW-L-L-tHS-cWS-cWW
  • History status: Exact match
131
234
  • IL_75415.1
IL_75415.1
  • Basepair signature: cWW-L-L-L-L-L-L-cWW
  • History status: Exact match
  • Name: Pseudo-knot forming internal loop
101
235
  • IL_57285.1
IL_57285.1
  • Basepair signature: cWW-L-L-tWW-L-L-L-cWS-cWW
  • History status: Exact match
131
236
  • IL_09333.1
IL_09333.1
  • Basepair signature: cWW-tWH-tWH-tHW-tHW-cWW
  • History status: Exact match
  • Name: SSU Helix 8 (h8) IL T. thermophilus
131
237
  • IL_39324.1
IL_39324.1
  • Basepair signature: cWW-tSS-tHH-cSW-bif-tSH-tWH-R-R-tHS-cWW-cWW
  • History status: Exact match
201
238
  • IL_63253.1
IL_63253.1
  • Basepair signature: cWW-R-R-cWW
  • History status: Exact match
  • Name: LSU H77 | cWW-bulge-cWW | 16S h19 IL and 23S H41 IL | cWW-bulge-cWW
71
239
  • IL_83920.1
IL_83920.1
  • Basepair signature: cWW-cWW-L-cWW
  • History status: Exact match
71
240
  • IL_31224.1
IL_31224.1
  • Basepair signature: cWW-L-R-R-cWW
  • History status: Exact match
  • Name: 23S H91 IL
101
241
  • IL_17682.1
IL_17682.1
  • Basepair signature: cWW-L-R-tSH-tHW-cSH-tHH-tHS-cWW-cWW
  • History status: Exact match
  • Name: Sarcin-ricin motif from Eukaryal LSU Helix 11
171
242
  • IL_41516.1
IL_41516.1
  • Basepair signature: cWW-L-R-L-cWW
  • History status: New id, no parents
101
243
  • IL_46151.1
IL_46151.1
  • Basepair signature: cWW-tSH-tSH-tHS-bif-cWW
  • History status: New id, 1 parent
  • Name: Triple Sheared with unpaired, inserted A
111
244
  • IL_86453.1
IL_86453.1
  • Basepair signature: cWW-R-R-cWW-cWW
  • History status: New id, 1 parent
  • Name: 23S H73 ILa : Part of larger Motif | Single sheared with bulged bases | 23S H73 ILa : Part of larger Motif | Single sheared with bulged bases | Single sheared with bulged bases | Single sheared (tHS) with bulged bases. LSU Helix 75 (H75)
91
245
  • IL_53323.1
IL_53323.1
  • Basepair signature: cWW-L-R-R-L-cWW-cWW
  • History status: Exact match
101
246
  • IL_87523.1
IL_87523.1
  • Basepair signature: cWW-R-R-R-R-tHS-cWW
  • History status: Exact match
111
247
  • IL_83250.1
IL_83250.1
  • Basepair signature: cWW-tWH-R-R-R-cSH-cWW-cWW
  • History status: Exact match
  • Name: 16S h40 3WJ T.th.
111
248
  • IL_21254.1
IL_21254.1
  • Basepair signature: cWW-tWH-cWW-tHS-tSS-R-R-cWW
  • History status: Exact match
  • Name: SSU Helix 11 (h11) IL Kink-turn T. thermophilus
141
249
  • IL_43316.1
IL_43316.1
  • Basepair signature: cWW-tSH-L-L-tHH-cWW
  • History status: Exact match
111
250
  • IL_52509.1
IL_52509.1
  • Basepair signature: cWW-cWW-L-L-tHS-cWW
  • History status: Exact match
101
251
  • IL_25082.1
IL_25082.1
  • Basepair signature: cWW-L-R-R-L-L-tSH-tSS-cWW-cWW-cWW
  • History status: Exact match
181
252
  • IL_15205.1
IL_15205.1
  • Basepair signature: cWW-cWW-L-cSW-L-tHS-cWW
  • History status: Exact match
131
253
  • IL_27640.1
IL_27640.1
  • Basepair signature: cWW-cWW-L-R-R-R-R-R-L-tHS-cWW
  • History status: Exact match
151
254
  • IL_80714.1
IL_80714.1
  • Basepair signature: cWW-tSH-L-R-R-L-L-L-cWW
  • History status: Exact match
121
255
  • IL_41027.1
IL_41027.1
  • Basepair signature: cWW-bif-R-cSH-tWH-tHS-cWW
  • History status: New id, no parents
121
256
  • IL_61730.1
IL_61730.1
  • Basepair signature: cWW-L-R-L-tHW-L-L-cWW
  • History status: Exact match
111
257
  • IL_98924.1
IL_98924.1
  • Basepair signature: cWW-L-L-L-cWW-cWW
  • History status: Exact match
101
258
  • IL_21077.1
IL_21077.1
  • Basepair signature: cWW-L-R-R-R-cWW
  • History status: Exact match
101
259
  • IL_91078.1
IL_91078.1
  • Basepair signature: cWW-tSW-L-R-R-L-tWS-cWW
  • History status: Exact match
141
260
  • IL_98655.1
IL_98655.1
  • Basepair signature: cWW-L-cHW-L-L-tHH-tSW-L-cWW
  • History status: Exact match
  • Name: Part of H71 Junction in 26S rRNA from Yeast
161
261
  • IL_27668.1
IL_27668.1
  • Basepair signature: cWW-L-L-L-L-L-tHS-cWW
  • History status: Exact match
121
262
  • IL_88119.1
IL_88119.1
  • Basepair signature: cWW-cSH-R-cWW
  • History status: Exact match
81
263
  • IL_45432.1
IL_45432.1
  • Basepair signature: cWW-tSH-tHW-tWH-L-R-R-L-cWW
  • History status: New id, no parents
161
264
  • IL_71685.1
IL_71685.1
  • Basepair signature: cWW-cWW-bif-R-cSH-tWH-tHS-cWW
  • History status: Exact match
  • Name: Sarcin-like with an intercalated basepair
141
265
  • IL_49527.1
IL_49527.1
  • Basepair signature: cWW-R-R-cWW-cWW-cWW
  • History status: Exact match
101
266
  • IL_57977.1
IL_57977.1
  • Basepair signature: cWW-tSH-L-R-L-tHS-cWW
  • History status: Exact match
111
267
  • IL_02897.1
IL_02897.1
  • Basepair signature: cWW-L-R-cWW-L-L-tSW-L-cWW
  • History status: Exact match
  • Name: Part of Helix 71 (H71) junction in 23S rRNA E.c. H.m. and Tetrahymena | Part of H71 junction in 23S rRNA from T.th.
161
268
  • IL_36006.1
IL_36006.1
  • Basepair signature: cWW-cWW-L-cWW
  • History status: New id, no parents
81
269
  • IL_52958.1
IL_52958.1
  • Basepair signature: cWW-L-R-R-L-L-cWW
  • History status: Exact match
101
270
  • IL_86336.1
IL_86336.1
  • Basepair signature: cWW-L-R-L-L-L-cWW
  • History status: Exact match
101
271
  • IL_30067.1
IL_30067.1
  • Basepair signature: cWW-R-bif-tHW-tHS-cWW
  • History status: Exact match
101
272
  • IL_06177.1
IL_06177.1
  • Basepair signature: cWW-L-R-cWW
  • History status: Exact match
  • Name: cWW AG or UU
61
273
  • IL_22909.1
IL_22909.1
  • Basepair signature: cWW-L-cSH-R-R-R-cWW
  • History status: Exact match
91
274
  • IL_11778.1
IL_11778.1
  • Basepair signature: cWW-R-R-R-cWW
  • History status: Exact match
81
275
  • IL_85510.1
IL_85510.1
  • Basepair signature: cWW-L-L-cWW
  • History status: Exact match
111
276
  • IL_02835.1
IL_02835.1
  • Basepair signature: cWW-L-L-L-L-L-tHH-tHS-cWW
  • History status: Exact match
131
277
  • IL_62296.1
IL_62296.1
  • Basepair signature: cWW-tSS-cSS-cWW-L-R-R-L-L-L-cWW
  • History status: New id, no parents
151
278
  • IL_23639.1
IL_23639.1
  • Basepair signature: cWW-tWH-tHS-L-cWW
  • History status: Exact match
  • Name: tWH-tHS-L-cWW
101
279
  • IL_23448.1
IL_23448.1
  • Basepair signature: cWW-L-L-cWW
  • History status: Exact match
61
280
  • IL_12507.1
IL_12507.1
  • Basepair signature: cWW-cSS-cSS-R-R-L-L-L-cWW
  • History status: Exact match
131
281
  • IL_25771.1
IL_25771.1
  • Basepair signature: cWW-R-R-R-cWW
  • History status: New id, 1 parent
81
282
  • IL_68767.1
IL_68767.1
  • Basepair signature: cWW-L-L-cWW
  • History status: Exact match
61



Exact match 172; Updated, 1 parent 46; New id, no parents 14; New id, 1 parent 24; New id, 2 parents 11; Updated, 2 parents 7; > 2 parents 8;