Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
HL_5VYC_0011/i1/7:17No text annotation
Not in a motif group
homologous
HL_4V88_186
HL_89881.2
HL_5VYC_0021/i1/69:80No text annotation
Not in a motif group
geometric
HL_5TBW_012
HL_86373.2
HL_5VYC_0031/i1/156:162Other HL
Not in a motif group
homologous
HL_4V88_188
HL_76539.2
HL_5VYC_0041/i1/195:204No text annotation
Not in a motif group
geometric
HL_2ZZM_002
HL_23083.1
HL_5VYC_0051/i1/288:295No text annotation
Not in a motif group
HL_5VYC_0061/i1/321:330No text annotation
Not in a motif group
HL_5VYC_0071/i1/377:387No text annotation
Not in a motif group
HL_5VYC_0081/i1/416:421No text annotation
Not in a motif group
geometric
HL_5U3G_001
HL_87030.2
HL_5VYC_0091/i1/441:452No text annotation
Not in a motif group
homologous
HL_4V88_195
HL_84288.1
HL_5VYC_0101/i1/462:467UNCG
Not in a motif group
homologous
HL_4V88_196
HL_03562.2
HL_5VYC_0111/i1/498:504No text annotation
Not in a motif group
homologous
HL_4V88_197
HL_09136.1
HL_5VYC_0121/i1/534:550No text annotation
Not in a motif group
HL_5VYC_0131/i1/566:584No text annotation
Not in a motif group
HL_5VYC_0141/i1/618:623Other HL
Not in a motif group
homologous
HL_4V88_200
HL_53845.1
HL_5VYC_0151/i1/820:828No text annotation
Not in a motif group
homologous
HL_4V88_203
HL_46766.2
HL_5VYC_0161/i1/833:841No text annotation
Not in a motif group
HL_5VYC_0171/i1/874:911No text annotation
Not in a motif group
HL_5VYC_0181/i1/957:966No text annotation
Not in a motif group
homologous
HL_4V88_206
HL_12326.1
HL_5VYC_0191/i1/994:999Other HL
Not in a motif group
homologous
HL_4V88_207
HL_87030.2
HL_5VYC_0201/i1/1053:1065No text annotation
Not in a motif group
HL_5VYC_0211/i1/1112:1121No text annotation
Not in a motif group
HL_5VYC_0221/i1/1141:1146Other HL
Not in a motif group
homologous
HL_4V88_210
HL_42097.1
HL_5VYC_0231/i1/1178:1183GNRA
Not in a motif group
homologous
HL_4V88_211
HL_42097.1
HL_5VYC_0241/i1/1245:1254No text annotation
Not in a motif group
homologous
HL_4V88_212
HL_73530.2
HL_5VYC_0251/i1/1353:1358GNRA
Not in a motif group
homologous
HL_4V88_214
HL_42097.1
HL_5VYC_0261/i1/1366:1373No text annotation
Not in a motif group
homologous
HL_4V88_215
HL_71554.2
HL_5VYC_0271/i1/1411:1434No text annotation
Not in a motif group
HL_5VYC_0281/i1/1460:1466No text annotation
Not in a motif group
homologous
HL_4V88_217
HL_42097.1
HL_5VYC_0291/i1/1565:1570GNRA
Not in a motif group
homologous
HL_4V88_218
HL_42097.1
HL_5VYC_0301/i1/1614:1625No text annotation
Not in a motif group
homologous
HL_4V88_219
HL_22554.1
HL_5VYC_0311/i1/1658:1666No text annotation
Not in a motif group
homologous
HL_4V88_220
HL_60812.1
HL_5VYC_0331/i1/1847:1852Other HL
Not in a motif group
homologous
HL_4V88_222
HL_16173.1
HL_5VYC_0341/i2/7:17No text annotation
Not in a motif group
homologous
HL_4V88_186
HL_89881.2
HL_5VYC_0351/i2/69:80No text annotation
Not in a motif group
geometric
HL_5TBW_012
HL_86373.2
HL_5VYC_0361/i2/156:162Other HL
Not in a motif group
homologous
HL_4V88_188
HL_76539.2
HL_5VYC_0371/i2/195:204No text annotation
Not in a motif group
geometric
HL_2ZZM_002
HL_23083.1
HL_5VYC_0381/i2/288:295No text annotation
Not in a motif group
HL_5VYC_0391/i2/321:330No text annotation
Not in a motif group
HL_5VYC_0401/i2/377:387No text annotation
Not in a motif group
HL_5VYC_0411/i2/416:421No text annotation
Not in a motif group
geometric
HL_5U3G_001
HL_87030.2
HL_5VYC_0421/i2/441:452No text annotation
Not in a motif group
homologous
HL_4V88_195
HL_84288.1
HL_5VYC_0431/i2/462:467UNCG
Not in a motif group
homologous
HL_4V88_196
HL_03562.2
HL_5VYC_0441/i2/498:504No text annotation
Not in a motif group
homologous
HL_4V88_197
HL_09136.1
HL_5VYC_0451/i2/534:550No text annotation
Not in a motif group
HL_5VYC_0461/i2/566:584No text annotation
Not in a motif group
HL_5VYC_0471/i2/618:623Other HL
Not in a motif group
homologous
HL_4V88_200
HL_53845.1
HL_5VYC_0481/i2/820:828No text annotation
Not in a motif group
homologous
HL_4V88_203
HL_46766.2
HL_5VYC_0491/i2/833:841No text annotation
Not in a motif group
HL_5VYC_0501/i2/874:911No text annotation
Not in a motif group
HL_5VYC_0511/i2/957:966No text annotation
Not in a motif group
homologous
HL_4V88_206
HL_12326.1
HL_5VYC_0521/i2/994:999Other HL
Not in a motif group
homologous
HL_4V88_207
HL_87030.2
HL_5VYC_0531/i2/1053:1065No text annotation
Not in a motif group
HL_5VYC_0541/i2/1112:1121No text annotation
Not in a motif group
HL_5VYC_0551/i2/1141:1146Other HL
Not in a motif group
homologous
HL_4V88_210
HL_42097.1
HL_5VYC_0561/i2/1178:1183GNRA
Not in a motif group
homologous
HL_4V88_211
HL_42097.1
HL_5VYC_0571/i2/1245:1254No text annotation
Not in a motif group
homologous
HL_4V88_212
HL_73530.2
HL_5VYC_0581/i2/1353:1358GNRA
Not in a motif group
homologous
HL_4V88_214
HL_42097.1
HL_5VYC_0591/i2/1366:1373No text annotation
Not in a motif group
homologous
HL_4V88_215
HL_71554.2
HL_5VYC_0601/i2/1411:1434No text annotation
Not in a motif group
HL_5VYC_0611/i2/1460:1466No text annotation
Not in a motif group
homologous
HL_4V88_217
HL_42097.1
HL_5VYC_0621/i2/1565:1570GNRA
Not in a motif group
homologous
HL_4V88_218
HL_42097.1
HL_5VYC_0631/i2/1614:1625No text annotation
Not in a motif group
homologous
HL_4V88_219
HL_22554.1
HL_5VYC_0641/i2/1658:1666No text annotation
Not in a motif group
homologous
HL_4V88_220
HL_60812.1
HL_5VYC_0661/i2/1847:1852Other HL
Not in a motif group
homologous
HL_4V88_222
HL_16173.1
HL_5VYC_0671/i3/7:17No text annotation
Not in a motif group
homologous
HL_4V88_186
HL_89881.2
HL_5VYC_0681/i3/69:80No text annotation
Not in a motif group
geometric
HL_5TBW_012
HL_86373.2
HL_5VYC_0691/i3/156:162Other HL
Not in a motif group
homologous
HL_4V88_188
HL_76539.2
HL_5VYC_0701/i3/195:204No text annotation
Not in a motif group
geometric
HL_2ZZM_002
HL_23083.1
HL_5VYC_0711/i3/288:295No text annotation
Not in a motif group
HL_5VYC_0721/i3/321:330No text annotation
Not in a motif group
HL_5VYC_0731/i3/377:387No text annotation
Not in a motif group
HL_5VYC_0741/i3/416:421No text annotation
Not in a motif group
geometric
HL_5U3G_001
HL_87030.2
HL_5VYC_0751/i3/441:452No text annotation
Not in a motif group
homologous
HL_4V88_195
HL_84288.1
HL_5VYC_0761/i3/462:467UNCG
Not in a motif group
homologous
HL_4V88_196
HL_03562.2
HL_5VYC_0771/i3/498:504No text annotation
Not in a motif group
homologous
HL_4V88_197
HL_09136.1
HL_5VYC_0781/i3/534:550No text annotation
Not in a motif group
HL_5VYC_0791/i3/566:584No text annotation
Not in a motif group
HL_5VYC_0801/i3/618:623Other HL
Not in a motif group
homologous
HL_4V88_200
HL_53845.1
HL_5VYC_0811/i3/820:828No text annotation
Not in a motif group
homologous
HL_4V88_203
HL_46766.2
HL_5VYC_0821/i3/833:841No text annotation
Not in a motif group
HL_5VYC_0831/i3/874:911No text annotation
Not in a motif group
HL_5VYC_0841/i3/957:966No text annotation
Not in a motif group
homologous
HL_4V88_206
HL_12326.1
HL_5VYC_0851/i3/994:999Other HL
Not in a motif group
homologous
HL_4V88_207
HL_87030.2
HL_5VYC_0861/i3/1053:1065No text annotation
Not in a motif group
HL_5VYC_0871/i3/1112:1121No text annotation
Not in a motif group
HL_5VYC_0881/i3/1141:1146Other HL
Not in a motif group
homologous
HL_4V88_210
HL_42097.1
HL_5VYC_0891/i3/1178:1183GNRA
Not in a motif group
homologous
HL_4V88_211
HL_42097.1
HL_5VYC_0901/i3/1245:1254No text annotation
Not in a motif group
homologous
HL_4V88_212
HL_73530.2
HL_5VYC_0911/i3/1353:1358GNRA
Not in a motif group
homologous
HL_4V88_214
HL_42097.1
HL_5VYC_0921/i3/1366:1373No text annotation
Not in a motif group
homologous
HL_4V88_215
HL_71554.2
HL_5VYC_0931/i3/1411:1434No text annotation
Not in a motif group
HL_5VYC_0941/i3/1460:1466No text annotation
Not in a motif group
homologous
HL_4V88_217
HL_42097.1
HL_5VYC_0951/i3/1565:1570GNRA
Not in a motif group
homologous
HL_4V88_218
HL_42097.1
HL_5VYC_0961/i3/1614:1625No text annotation
Not in a motif group
homologous
HL_4V88_219
HL_22554.1
HL_5VYC_0971/i3/1658:1666No text annotation
Not in a motif group
homologous
HL_4V88_220
HL_60812.1
HL_5VYC_0991/i3/1847:1852Other HL
Not in a motif group
homologous
HL_4V88_222
HL_16173.1
HL_5VYC_1001/i4/7:17No text annotation
Not in a motif group
homologous
HL_4V88_186
HL_89881.2
HL_5VYC_1011/i4/69:80No text annotation
Not in a motif group
geometric
HL_5TBW_012
HL_86373.2
HL_5VYC_1021/i4/156:162Other HL
Not in a motif group
homologous
HL_4V88_188
HL_76539.2
HL_5VYC_1031/i4/195:204No text annotation
Not in a motif group
geometric
HL_2ZZM_002
HL_23083.1
HL_5VYC_1041/i4/288:295No text annotation
Not in a motif group
HL_5VYC_1051/i4/321:330No text annotation
Not in a motif group
HL_5VYC_1061/i4/377:387No text annotation
Not in a motif group
HL_5VYC_1071/i4/416:421No text annotation
Not in a motif group
geometric
HL_5U3G_001
HL_87030.2
HL_5VYC_1081/i4/441:452No text annotation
Not in a motif group
homologous
HL_4V88_195
HL_84288.1
HL_5VYC_1091/i4/462:467UNCG
Not in a motif group
homologous
HL_4V88_196
HL_03562.2
HL_5VYC_1101/i4/498:504No text annotation
Not in a motif group
homologous
HL_4V88_197
HL_09136.1
HL_5VYC_1111/i4/534:550No text annotation
Not in a motif group
HL_5VYC_1121/i4/566:584No text annotation
Not in a motif group
HL_5VYC_1131/i4/618:623Other HL
Not in a motif group
homologous
HL_4V88_200
HL_53845.1
HL_5VYC_1141/i4/820:828No text annotation
Not in a motif group
homologous
HL_4V88_203
HL_46766.2
HL_5VYC_1151/i4/833:841No text annotation
Not in a motif group
HL_5VYC_1161/i4/874:911No text annotation
Not in a motif group
HL_5VYC_1171/i4/957:966No text annotation
Not in a motif group
homologous
HL_4V88_206
HL_12326.1
HL_5VYC_1181/i4/994:999Other HL
Not in a motif group
homologous
HL_4V88_207
HL_87030.2
HL_5VYC_1191/i4/1053:1065No text annotation
Not in a motif group
HL_5VYC_1201/i4/1112:1121No text annotation
Not in a motif group
HL_5VYC_1211/i4/1141:1146Other HL
Not in a motif group
homologous
HL_4V88_210
HL_42097.1
HL_5VYC_1221/i4/1178:1183GNRA
Not in a motif group
homologous
HL_4V88_211
HL_42097.1
HL_5VYC_1231/i4/1245:1254No text annotation
Not in a motif group
homologous
HL_4V88_212
HL_73530.2
HL_5VYC_1241/i4/1353:1358GNRA
Not in a motif group
homologous
HL_4V88_214
HL_42097.1
HL_5VYC_1251/i4/1366:1373No text annotation
Not in a motif group
homologous
HL_4V88_215
HL_71554.2
HL_5VYC_1261/i4/1411:1434No text annotation
Not in a motif group
HL_5VYC_1271/i4/1460:1466No text annotation
Not in a motif group
homologous
HL_4V88_217
HL_42097.1
HL_5VYC_1281/i4/1565:1570GNRA
Not in a motif group
homologous
HL_4V88_218
HL_42097.1
HL_5VYC_1291/i4/1614:1625No text annotation
Not in a motif group
homologous
HL_4V88_219
HL_22554.1
HL_5VYC_1301/i4/1658:1666No text annotation
Not in a motif group
homologous
HL_4V88_220
HL_60812.1
HL_5VYC_1321/i4/1847:1852Other HL
Not in a motif group
homologous
HL_4V88_222
HL_16173.1
HL_5VYC_1331/i5/7:17No text annotation
Not in a motif group
homologous
HL_4V88_186
HL_89881.2
HL_5VYC_1341/i5/69:80No text annotation
Not in a motif group
geometric
HL_5TBW_012
HL_86373.2
HL_5VYC_1351/i5/156:162Other HL
Not in a motif group
homologous
HL_4V88_188
HL_76539.2
HL_5VYC_1361/i5/195:204No text annotation
Not in a motif group
geometric
HL_2ZZM_002
HL_23083.1
HL_5VYC_1371/i5/288:295No text annotation
Not in a motif group
HL_5VYC_1381/i5/321:330No text annotation
Not in a motif group
HL_5VYC_1391/i5/377:387No text annotation
Not in a motif group
HL_5VYC_1401/i5/416:421No text annotation
Not in a motif group
geometric
HL_5U3G_001
HL_87030.2
HL_5VYC_1411/i5/441:452No text annotation
Not in a motif group
homologous
HL_4V88_195
HL_84288.1
HL_5VYC_1421/i5/462:467UNCG
Not in a motif group
homologous
HL_4V88_196
HL_03562.2
HL_5VYC_1431/i5/498:504No text annotation
Not in a motif group
homologous
HL_4V88_197
HL_09136.1
HL_5VYC_1441/i5/534:550No text annotation
Not in a motif group
HL_5VYC_1451/i5/566:584No text annotation
Not in a motif group
HL_5VYC_1461/i5/618:623Other HL
Not in a motif group
homologous
HL_4V88_200
HL_53845.1
HL_5VYC_1471/i5/820:828No text annotation
Not in a motif group
homologous
HL_4V88_203
HL_46766.2
HL_5VYC_1481/i5/833:841No text annotation
Not in a motif group
HL_5VYC_1491/i5/874:911No text annotation
Not in a motif group
HL_5VYC_1501/i5/957:966No text annotation
Not in a motif group
homologous
HL_4V88_206
HL_12326.1
HL_5VYC_1511/i5/994:999Other HL
Not in a motif group
homologous
HL_4V88_207
HL_87030.2
HL_5VYC_1521/i5/1053:1065No text annotation
Not in a motif group
HL_5VYC_1531/i5/1112:1121No text annotation
Not in a motif group
HL_5VYC_1541/i5/1141:1146Other HL
Not in a motif group
homologous
HL_4V88_210
HL_42097.1
HL_5VYC_1551/i5/1178:1183GNRA
Not in a motif group
homologous
HL_4V88_211
HL_42097.1
HL_5VYC_1561/i5/1245:1254No text annotation
Not in a motif group
homologous
HL_4V88_212
HL_73530.2
HL_5VYC_1571/i5/1353:1358GNRA
Not in a motif group
homologous
HL_4V88_214
HL_42097.1
HL_5VYC_1581/i5/1366:1373No text annotation
Not in a motif group
homologous
HL_4V88_215
HL_71554.2
HL_5VYC_1591/i5/1411:1434No text annotation
Not in a motif group
HL_5VYC_1601/i5/1460:1466No text annotation
Not in a motif group
homologous
HL_4V88_217
HL_42097.1
HL_5VYC_1611/i5/1565:1570GNRA
Not in a motif group
homologous
HL_4V88_218
HL_42097.1
HL_5VYC_1621/i5/1614:1625No text annotation
Not in a motif group
homologous
HL_4V88_219
HL_22554.1
HL_5VYC_1631/i5/1658:1666No text annotation
Not in a motif group
homologous
HL_4V88_220
HL_60812.1
HL_5VYC_1651/i5/1847:1852Other HL
Not in a motif group
homologous
HL_4V88_222
HL_16173.1
HL_5VYC_1661/i6/7:17No text annotation
Not in a motif group
homologous
HL_4V88_186
HL_89881.2
HL_5VYC_1671/i6/69:80No text annotation
Not in a motif group
geometric
HL_5TBW_012
HL_86373.2
HL_5VYC_1681/i6/156:162Other HL
Not in a motif group
homologous
HL_4V88_188
HL_76539.2
HL_5VYC_1691/i6/195:204No text annotation
Not in a motif group
geometric
HL_2ZZM_002
HL_23083.1
HL_5VYC_1701/i6/288:295No text annotation
Not in a motif group
HL_5VYC_1711/i6/321:330No text annotation
Not in a motif group
HL_5VYC_1721/i6/377:387No text annotation
Not in a motif group
HL_5VYC_1731/i6/416:421No text annotation
Not in a motif group
geometric
HL_5U3G_001
HL_87030.2
HL_5VYC_1741/i6/441:452No text annotation
Not in a motif group
homologous
HL_4V88_195
HL_84288.1
HL_5VYC_1751/i6/462:467UNCG
Not in a motif group
homologous
HL_4V88_196
HL_03562.2
HL_5VYC_1761/i6/498:504No text annotation
Not in a motif group
homologous
HL_4V88_197
HL_09136.1
HL_5VYC_1771/i6/534:550No text annotation
Not in a motif group
HL_5VYC_1781/i6/566:584No text annotation
Not in a motif group
HL_5VYC_1791/i6/618:623Other HL
Not in a motif group
homologous
HL_4V88_200
HL_53845.1
HL_5VYC_1801/i6/820:828No text annotation
Not in a motif group
homologous
HL_4V88_203
HL_46766.2
HL_5VYC_1811/i6/833:841No text annotation
Not in a motif group
HL_5VYC_1821/i6/874:911No text annotation
Not in a motif group
HL_5VYC_1831/i6/957:966No text annotation
Not in a motif group
homologous
HL_4V88_206
HL_12326.1
HL_5VYC_1841/i6/994:999Other HL
Not in a motif group
homologous
HL_4V88_207
HL_87030.2
HL_5VYC_1851/i6/1053:1065No text annotation
Not in a motif group
HL_5VYC_1861/i6/1112:1121No text annotation
Not in a motif group
HL_5VYC_1871/i6/1141:1146Other HL
Not in a motif group
homologous
HL_4V88_210
HL_42097.1
HL_5VYC_1881/i6/1178:1183GNRA
Not in a motif group
homologous
HL_4V88_211
HL_42097.1
HL_5VYC_1891/i6/1245:1254No text annotation
Not in a motif group
homologous
HL_4V88_212
HL_73530.2
HL_5VYC_1901/i6/1353:1358GNRA
Not in a motif group
homologous
HL_4V88_214
HL_42097.1
HL_5VYC_1911/i6/1366:1373No text annotation
Not in a motif group
homologous
HL_4V88_215
HL_71554.2
HL_5VYC_1921/i6/1411:1434No text annotation
Not in a motif group
HL_5VYC_1931/i6/1460:1466No text annotation
Not in a motif group
homologous
HL_4V88_217
HL_42097.1
HL_5VYC_1941/i6/1565:1570GNRA
Not in a motif group
homologous
HL_4V88_218
HL_42097.1
HL_5VYC_1951/i6/1614:1625No text annotation
Not in a motif group
homologous
HL_4V88_219
HL_22554.1
HL_5VYC_1961/i6/1658:1666No text annotation
Not in a motif group
homologous
HL_4V88_220
HL_60812.1
HL_5VYC_1981/i6/1847:1852Other HL
Not in a motif group
homologous
HL_4V88_222
HL_16173.1

Problematic loops

#loop idProblemSequence
HL_5VYC_032No text annotation
HL_5VYC_065No text annotation
HL_5VYC_098No text annotation
HL_5VYC_131No text annotation
HL_5VYC_164No text annotation
HL_5VYC_197No text annotation

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
IL_5VYC_0011/i1/23:25,
1/i1/649:651
No text annotation
Not in a motif group
geometric
IL_4KR9_002
IL_51629.2
IL_5VYC_0021/i1/34:36,
1/i1/519:521
UC cWW
Not in a motif group
homologous
IL_4V88_385
IL_51629.2
IL_5VYC_0031/i1/37:40,
1/i1/514:518
Double sheared
Not in a motif group
geometric
IL_4WF9_016
IL_09705.9
IL_5VYC_0041/i1/41:47,
1/i1/479:481
No text annotation
Not in a motif group
homologous
IL_4V88_387
IL_33912.1
IL_5VYC_0051/i1/49:51,
1/i1/476:477
Minor groove platform
Not in a motif group
homologous
IL_4V88_388
IL_93353.1
IL_5VYC_0061/i1/57:62,
1/i1/86:88
No text annotation
Not in a motif group
homologous
IL_4V88_389
IL_95004.1
IL_5VYC_0071/i1/63:69,
1/i1/80:85
No text annotation
Not in a motif group
IL_5VYC_0081/i1/108:110,
1/i1/351:353
UU cWW
Not in a motif group
geometric
IL_4TS2_004
IL_95997.1
IL_5VYC_0091/i1/110:112,
1/i1/349:351
Isolated cWH basepair
Not in a motif group
geometric
IL_4J50_003
IL_51629.2
IL_5VYC_0101/i1/112:115,
1/i1/348:349
Multiple bulged bases
Not in a motif group
homologous
IL_4V88_392
IL_44546.1
IL_5VYC_0111/i1/116:121,
1/i1/343:347
No text annotation
Not in a motif group
homologous
IL_4V88_393
IL_64181.2
IL_5VYC_0121/i1/145:151,
1/i1/167:174
tWH-tWH-tHW-tHW
Not in a motif group
geometric
IL_4V88_394
IL_80604.2
IL_5VYC_0131/i1/151:154,
1/i1/164:167
Tandem non-canonical cWW pairs
Not in a motif group
geometric
IL_4WF9_109
IL_30621.2
IL_5VYC_0141/i1/188:192,
1/i1/207:211
No text annotation
Not in a motif group
IL_5VYC_0161/i1/316:321,
1/i1/330:334
No text annotation
Not in a motif group
IL_5VYC_0171/i1/359:364,
1/i1/396:403
Kink-turn with non-sequential stacking
Not in a motif group
homologous
IL_4V88_402
IL_45067.2
IL_5VYC_0181/i1/366:371,
1/i1/393:394
No text annotation
Not in a motif group
geometric
IL_5Y58_001
IL_48100.2
IL_5VYC_0191/i1/411:413,
1/i1/424:429
No text annotation
Not in a motif group
homologous
IL_4V88_404
IL_11347.1
IL_5VYC_0201/i1/436:439,
1/i1/454:457
Tandem non-canonical cWW pairs
Not in a motif group
geometric
IL_1D4R_001
IL_30621.2
IL_5VYC_0211/i1/491:495,
1/i1/508:509
C-loop
Not in a motif group
geometric
IL_5J7L_018
IL_75255.1
IL_5VYC_0221/i1/495:496,
1/i1/506:508
Single bulged G
Not in a motif group
geometric
IL_5J7L_019
IL_00225.2
IL_5VYC_0231/i1/599:608,
1/i1/635:637
No text annotation
Not in a motif group
IL_5VYC_0241/i1/610:617,
1/i1/624:633
No text annotation
Not in a motif group
IL_5VYC_0251/i1/663:665,
1/i1/1162:1164
No text annotation
Not in a motif group
geometric
IL_4KNQ_003
IL_95997.1
IL_5VYC_0261/i1/665:671,
1/i1/1161:1162
No text annotation
Not in a motif group
geometric
IL_4V88_416
IL_69996.1
IL_5VYC_0271/i1/673:676,
1/i1/1029:1032
Tandem non-canonical cWW pairs
Not in a motif group
geometric
IL_1MFQ_004
IL_30621.2
IL_5VYC_0281/i1/676:680,
1/i1/1025:1029
tSH-tHW-tHS
Not in a motif group
homologous
IL_4V88_418
IL_17136.1
IL_5VYC_0291/i1/805:807,
1/i1/856:858
No text annotation
Not in a motif group
homologous
IL_4V88_424
IL_95997.1
IL_5VYC_0301/i1/807:816,
1/i1/848:856
No text annotation
Not in a motif group
IL_5VYC_0311/i1/922:923,
1/i1/1019:1022
Major groove platform; stack outside cWW
Not in a motif group
homologous
IL_4V88_428
IL_50694.2
IL_5VYC_0321/i1/925:927,
1/i1/1014:1017
Isolated non-canonical cWW with bulges
Not in a motif group
geometric
IL_3TD0_005
IL_82068.2
IL_5VYC_0331/i1/927:931,
1/i1/1010:1014
No text annotation
Not in a motif group
geometric
IL_5TBW_121
IL_05145.2
IL_5VYC_0341/i1/931:935,
1/i1/1007:1010
Tandem non-canonical cWW pairs
Not in a motif group
homologous
IL_4V88_431
IL_30621.2
IL_5VYC_0351/i1/942:946,
1/i1/980:984
No text annotation
Not in a motif group
IL_5VYC_0361/i1/952:956,
1/i1/967:974
Kink-turn
Not in a motif group
homologous
IL_4V88_434
IL_45067.2
IL_5VYC_0371/i1/1042:1047,
1/i1/1071:1073
Other IL
Not in a motif group
geometric
IL_4V88_435
IL_22046.1
IL_5VYC_0381/i1/1047:1051,
1/i1/1067:1071
tSH-tHW-tHS
Not in a motif group
homologous
IL_4V88_436
IL_17136.1
IL_5VYC_0391/i1/1091:1093,
1/i1/1152:1158
No text annotation
Not in a motif group
homologous
IL_4V88_437
IL_19557.3
IL_5VYC_0401/i1/1098:1101,
1/i1/1131:1134
Tandem non-canonical cWW pairs
Not in a motif group
homologous
IL_4V88_438
IL_30621.2
IL_5VYC_0411/i1/1101:1103,
1/i1/1129:1131
No text annotation
Not in a motif group
geometric
IL_1YZ9_002
IL_95997.1
IL_5VYC_0421/i1/1108:1110,
1/i1/1123:1124
Minor groove platform
Not in a motif group
geometric
IL_4LFB_054
IL_93353.1
IL_5VYC_0431/i1/1168:1175,
1/i1/1186:1191
8x6 Sarcin-Ricin with inserted Y; G-bulge
Not in a motif group
homologous
IL_4V88_440
IL_24606.2
IL_5VYC_0441/i1/1203:1205,
1/i1/1693:1696
Isolated non-canonical cWW with bulges
Not in a motif group
geometric
IL_4V9F_097
IL_82068.2
IL_5VYC_0451/i1/1206:1208,
1/i1/1691:1692
Single bulged G
Not in a motif group
homologous
IL_4V88_442
IL_00225.2
IL_5VYC_0461/i1/1214:1217,
1/i1/1681:1685
C-loop
Not in a motif group
homologous
IL_4V88_443
IL_63596.6
IL_5VYC_0471/i1/1230:1232,
1/i1/1526:1528
No text annotation
Not in a motif group
homologous
IL_4V88_444
IL_95997.1
IL_5VYC_0481/i1/1235:1236,
1/i1/1521:1523
Minor groove platform
Not in a motif group
homologous
IL_4V88_445
IL_42622.2
IL_5VYC_0491/i1/1270:1272,
1/i1/1510:1512
No text annotation
Not in a motif group
geometric
IL_4M4O_002
IL_95997.1
IL_5VYC_0501/i1/1272:1324,
1/i1/1504:1510
No text annotation
Not in a motif group
IL_5VYC_0511/i1/1325:1327,
1/i1/1502:1503
Single bulged U
Not in a motif group
homologous
IL_4V88_449
IL_83039.13
IL_5VYC_0521/i1/1329:1333,
1/i1/1498:1500
No text annotation
Not in a motif group
geometric
IL_5ZTM_001
IL_95997.1
IL_5VYC_0531/i1/1333:1335,
1/i1/1492:1498
Minor groove platform with extra cWW
Not in a motif group
homologous
IL_4V88_451
IL_92788.2
IL_5VYC_0541/i1/1336:1338,
1/i1/1488:1491
No text annotation
Not in a motif group
geometric
IL_5TBW_008
IL_95997.1
IL_5VYC_0551/i1/1347:1349,
1/i1/1380:1382
Isolated cWH basepair
Not in a motif group
homologous
IL_4V88_453
IL_51629.2
IL_5VYC_0561/i1/1363:1365,
1/i1/1374:1375
Minor groove platform
Not in a motif group
geometric
IL_4V88_454
IL_93353.1
IL_5VYC_0571/i1/1536:1539,
1/i1/1594:1597
Tandem non-canonical cWW pairs
Not in a motif group
geometric
IL_4K27_001
IL_30621.2
IL_5VYC_0581/i1/1560:1562,
1/i1/1573:1575
No text annotation
Not in a motif group
geometric
IL_5TBW_016
IL_51629.2
IL_5VYC_0591/i1/1604:1610,
1/i1/1629:1635
No text annotation
Not in a motif group
homologous
IL_8C3A_469
IL_10092.1
IL_5VYC_0601/i1/1700:1702,
1/i1/1833:1836
No text annotation
Not in a motif group
homologous
IL_4V88_463
IL_36143.3
IL_5VYC_0611/i1/1702:1705,
1/i1/1829:1833
No text annotation
Not in a motif group
geometric
IL_4V88_464
IL_99670.1
IL_5VYC_0621/i1/1706:1708,
1/i1/1826:1828
No text annotation
Not in a motif group
homologous
IL_4V88_465
IL_95997.1
IL_5VYC_0631/i1/1708:1712,
1/i1/1821:1826
No text annotation
Not in a motif group
IL_5VYC_0641/i1/1713:1716,
1/i1/1817:1820
Tandem non-canonical cWW pairs
Not in a motif group
geometric
IL_5TBW_100
IL_30621.2
IL_5VYC_0651/i1/1717:1720,
1/i1/1813:1816
Double sheared
Not in a motif group
homologous
IL_4V88_468
IL_09705.9
IL_5VYC_0661/i1/1720:1723,
1/i1/1811:1813
No text annotation
Not in a motif group
IL_5VYC_0671/i1/1729:1732,
1/i1/1802:1805
Tandem non-canonical cWW pairs
Not in a motif group
geometric
IL_1D4R_001
IL_30621.2
IL_5VYC_0681/i1/1733:1736,
1/i1/1798:1801
Double sheared
Not in a motif group
homologous
IL_4V88_471
IL_09705.9
IL_5VYC_0691/i1/1739:1741,
1/i1/1793:1795
No text annotation
Not in a motif group
geometric
IL_4NGF_002
IL_95997.1
IL_5VYC_0701/i1/1742:1746,
1/i1/1788:1792
Triple sheared
Not in a motif group
homologous
IL_4V88_474
IL_56467.8
IL_5VYC_0711/i2/23:25,
1/i2/649:651
No text annotation
Not in a motif group
geometric
IL_4KR9_002
IL_51629.2
IL_5VYC_0721/i2/34:36,
1/i2/519:521
UC cWW
Not in a motif group
homologous
IL_4V88_385
IL_51629.2
IL_5VYC_0731/i2/37:40,
1/i2/514:518
Double sheared
Not in a motif group
geometric
IL_4WF9_016
IL_09705.9
IL_5VYC_0741/i2/41:47,
1/i2/479:481
No text annotation
Not in a motif group
geometric
IL_4V88_387
IL_33912.1
IL_5VYC_0751/i2/49:51,
1/i2/476:477
Minor groove platform
Not in a motif group
homologous
IL_4V88_388
IL_93353.1
IL_5VYC_0761/i2/57:62,
1/i2/86:88
No text annotation
Not in a motif group
homologous
IL_4V88_389
IL_95004.1
IL_5VYC_0771/i2/63:69,
1/i2/80:85
No text annotation
Not in a motif group
IL_5VYC_0781/i2/108:110,
1/i2/351:353
UU cWW
Not in a motif group
geometric
IL_4TS2_004
IL_95997.1
IL_5VYC_0791/i2/110:112,
1/i2/349:351
Isolated cWH basepair
Not in a motif group
geometric
IL_4J50_003
IL_51629.2
IL_5VYC_0801/i2/112:115,
1/i2/348:349
Multiple bulged bases
Not in a motif group
homologous
IL_4V88_392
IL_44546.1
IL_5VYC_0811/i2/116:121,
1/i2/343:347
No text annotation
Not in a motif group
homologous
IL_4V88_393
IL_64181.2
IL_5VYC_0821/i2/145:151,
1/i2/167:174
tWH-tWH-tHW-tHW
Not in a motif group
homologous
IL_4V88_394
IL_80604.2
IL_5VYC_0831/i2/151:154,
1/i2/164:167
Tandem non-canonical cWW pairs
Not in a motif group
geometric
IL_4WF9_109
IL_30621.2
IL_5VYC_0851/i2/316:319,
1/i2/332:334
No text annotation
Not in a motif group
IL_5VYC_0861/i2/359:364,
1/i2/396:403
Kink-turn with non-sequential stacking
Not in a motif group
homologous
IL_4V88_402
IL_45067.2
IL_5VYC_0871/i2/366:371,
1/i2/393:394
No text annotation
Not in a motif group
geometric
IL_5Y58_001
IL_48100.2
IL_5VYC_0881/i2/411:413,
1/i2/424:429
No text annotation
Not in a motif group
homologous
IL_4V88_404
IL_11347.1
IL_5VYC_0891/i2/436:439,
1/i2/454:457
Tandem non-canonical cWW pairs
Not in a motif group
geometric
IL_1D4R_001
IL_30621.2
IL_5VYC_0901/i2/491:495,
1/i2/508:509
C-loop
Not in a motif group
geometric
IL_5J7L_018
IL_75255.1
IL_5VYC_0911/i2/495:496,
1/i2/506:508
Single bulged G
Not in a motif group
geometric
IL_5J7L_019
IL_00225.2
IL_5VYC_0921/i2/599:608,
1/i2/635:637
No text annotation
Not in a motif group
IL_5VYC_0931/i2/610:617,
1/i2/624:633
No text annotation
Not in a motif group
IL_5VYC_0941/i2/663:665,
1/i2/1162:1164
No text annotation
Not in a motif group
geometric
IL_4KNQ_003
IL_95997.1
IL_5VYC_0951/i2/665:671,
1/i2/1161:1162
No text annotation
Not in a motif group
homologous
IL_4V88_416
IL_69996.1
IL_5VYC_0961/i2/673:676,
1/i2/1029:1032
Tandem non-canonical cWW pairs
Not in a motif group
geometric
IL_1MFQ_004
IL_30621.2
IL_5VYC_0971/i2/676:680,
1/i2/1025:1029
tSH-tHW-tHS
Not in a motif group
homologous
IL_4V88_418
IL_17136.1
IL_5VYC_0981/i2/805:807,
1/i2/856:858
No text annotation
Not in a motif group
homologous
IL_4V88_424
IL_95997.1
IL_5VYC_0991/i2/807:816,
1/i2/848:856
No text annotation
Not in a motif group
IL_5VYC_1001/i2/922:923,
1/i2/1019:1022
Major groove platform; stack outside cWW
Not in a motif group
geometric
IL_4V88_428
IL_50694.2
IL_5VYC_1011/i2/925:927,
1/i2/1014:1017
Isolated non-canonical cWW with bulges
Not in a motif group
geometric
IL_3TD0_005
IL_82068.2
IL_5VYC_1021/i2/927:931,
1/i2/1010:1014
No text annotation
Not in a motif group
geometric
IL_5TBW_121
IL_05145.2
IL_5VYC_1031/i2/931:935,
1/i2/1007:1010
Tandem non-canonical cWW pairs
Not in a motif group
homologous
IL_4V88_431
IL_30621.2
IL_5VYC_1041/i2/942:946,
1/i2/980:984
No text annotation
Not in a motif group
IL_5VYC_1051/i2/952:956,
1/i2/967:974
Kink-turn
Not in a motif group
homologous
IL_4V88_434
IL_45067.2
IL_5VYC_1061/i2/1042:1047,
1/i2/1071:1073
Other IL
Not in a motif group
geometric
IL_4V88_435
IL_22046.1
IL_5VYC_1071/i2/1047:1051,
1/i2/1067:1071
tSH-tHW-tHS
Not in a motif group
homologous
IL_4V88_436
IL_17136.1
IL_5VYC_1081/i2/1091:1093,
1/i2/1152:1158
No text annotation
Not in a motif group
homologous
IL_4V88_437
IL_19557.3
IL_5VYC_1091/i2/1098:1101,
1/i2/1131:1134
Tandem non-canonical cWW pairs
Not in a motif group
homologous
IL_4V88_438
IL_30621.2
IL_5VYC_1101/i2/1101:1103,
1/i2/1129:1131
No text annotation
Not in a motif group
geometric
IL_1YZ9_002
IL_95997.1
IL_5VYC_1111/i2/1108:1110,
1/i2/1123:1124
Minor groove platform
Not in a motif group
geometric
IL_4LFB_054
IL_93353.1
IL_5VYC_1121/i2/1168:1175,
1/i2/1186:1191
8x6 Sarcin-Ricin with inserted Y; G-bulge
Not in a motif group
homologous
IL_4V88_440
IL_24606.2
IL_5VYC_1131/i2/1203:1205,
1/i2/1693:1696
Isolated non-canonical cWW with bulges
Not in a motif group
geometric
IL_4V9F_097
IL_82068.2
IL_5VYC_1141/i2/1206:1208,
1/i2/1691:1692
Single bulged G
Not in a motif group
homologous
IL_4V88_442
IL_00225.2
IL_5VYC_1151/i2/1214:1217,
1/i2/1681:1685
C-loop
Not in a motif group
homologous
IL_4V88_443
IL_63596.6
IL_5VYC_1161/i2/1230:1232,
1/i2/1526:1528
No text annotation
Not in a motif group
homologous
IL_4V88_444
IL_95997.1
IL_5VYC_1171/i2/1235:1236,
1/i2/1521:1523
Minor groove platform
Not in a motif group
homologous
IL_4V88_445
IL_42622.2
IL_5VYC_1181/i2/1270:1272,
1/i2/1510:1512
No text annotation
Not in a motif group
homologous
IL_4V88_446
IL_95997.1
IL_5VYC_1191/i2/1272:1324,
1/i2/1504:1510
No text annotation
Not in a motif group
IL_5VYC_1201/i2/1325:1327,
1/i2/1502:1503
Single bulged U
Not in a motif group
homologous
IL_4V88_449
IL_83039.13
IL_5VYC_1211/i2/1329:1333,
1/i2/1498:1500
Isolated cWS basepair
Not in a motif group
homologous
IL_4V88_450
IL_76319.2
IL_5VYC_1221/i2/1333:1335,
1/i2/1492:1498
Minor groove platform with extra cWW
Not in a motif group
geometric
IL_4V88_451
IL_92788.2
IL_5VYC_1231/i2/1336:1338,
1/i2/1488:1491
No text annotation
Not in a motif group
geometric
IL_5TBW_008
IL_95997.1
IL_5VYC_1241/i2/1347:1349,
1/i2/1380:1382
Isolated cWH basepair
Not in a motif group
homologous
IL_4V88_453
IL_51629.2
IL_5VYC_1251/i2/1363:1365,
1/i2/1374:1375
Minor groove platform
Not in a motif group
homologous
IL_4V88_454
IL_93353.1
IL_5VYC_1261/i2/1536:1539,
1/i2/1594:1597
Tandem non-canonical cWW pairs
Not in a motif group
geometric
IL_4K27_001
IL_30621.2
IL_5VYC_1271/i2/1560:1562,
1/i2/1573:1575
No text annotation
Not in a motif group
geometric
IL_5TBW_016
IL_51629.2
IL_5VYC_1281/i2/1604:1610,
1/i2/1629:1635
No text annotation
Not in a motif group
IL_5VYC_1291/i2/1700:1702,
1/i2/1833:1836
No text annotation
Not in a motif group
homologous
IL_4V88_463
IL_36143.3
IL_5VYC_1301/i2/1702:1705,
1/i2/1829:1833
No text annotation
Not in a motif group
geometric
IL_4V88_464
IL_99670.1
IL_5VYC_1311/i2/1706:1708,
1/i2/1826:1828
No text annotation
Not in a motif group
geometric
IL_1U9S_007
IL_95997.1
IL_5VYC_1321/i2/1708:1712,
1/i2/1821:1826
No text annotation
Not in a motif group
IL_5VYC_1331/i2/1713:1716,
1/i2/1817:1820
Tandem non-canonical cWW pairs
Not in a motif group
geometric
IL_5TBW_100
IL_30621.2
IL_5VYC_1341/i2/1717:1720,
1/i2/1813:1816
Double sheared
Not in a motif group
homologous
IL_4V88_468
IL_09705.9
IL_5VYC_1351/i2/1720:1723,
1/i2/1811:1813
No text annotation
Not in a motif group
IL_5VYC_1361/i2/1729:1732,
1/i2/1802:1805
Tandem non-canonical cWW pairs
Not in a motif group
geometric
IL_1D4R_001
IL_30621.2
IL_5VYC_1371/i2/1733:1736,
1/i2/1798:1801
Double sheared
Not in a motif group
homologous
IL_4V88_471
IL_09705.9
IL_5VYC_1381/i2/1739:1741,
1/i2/1793:1795
No text annotation
Not in a motif group
geometric
IL_4NGF_002
IL_95997.1
IL_5VYC_1391/i2/1742:1746,
1/i2/1788:1792
Triple sheared
Not in a motif group
homologous
IL_4V88_474
IL_56467.8
IL_5VYC_1401/i3/23:25,
1/i3/649:651
No text annotation
Not in a motif group
geometric
IL_4KR9_002
IL_51629.2
IL_5VYC_1411/i3/34:36,
1/i3/519:521
UC cWW
Not in a motif group
homologous
IL_4V88_385
IL_51629.2
IL_5VYC_1421/i3/37:40,
1/i3/514:518
Double sheared
Not in a motif group
geometric
IL_4WF9_016
IL_09705.9
IL_5VYC_1431/i3/41:47,
1/i3/479:481
No text annotation
Not in a motif group
homologous
IL_4V88_387
IL_33912.1
IL_5VYC_1441/i3/49:51,
1/i3/476:477
Minor groove platform
Not in a motif group
homologous
IL_4V88_388
IL_93353.1
IL_5VYC_1451/i3/57:62,
1/i3/86:88
No text annotation
Not in a motif group
homologous
IL_4V88_389
IL_95004.1
IL_5VYC_1461/i3/63:69,
1/i3/80:85
No text annotation
Not in a motif group
IL_5VYC_1471/i3/108:110,
1/i3/351:353
UU cWW
Not in a motif group
geometric
IL_4TS2_004
IL_95997.1
IL_5VYC_1481/i3/110:112,
1/i3/349:351
Isolated cWH basepair
Not in a motif group
geometric
IL_4J50_003
IL_51629.2
IL_5VYC_1491/i3/112:115,
1/i3/348:349
Multiple bulged bases
Not in a motif group
homologous
IL_4V88_392
IL_44546.1
IL_5VYC_1501/i3/116:121,
1/i3/343:347
No text annotation
Not in a motif group
homologous
IL_4V88_393
IL_64181.2
IL_5VYC_1511/i3/145:151,
1/i3/167:174
tWH-tWH-tHW-tHW
Not in a motif group
homologous
IL_4V88_394
IL_80604.2
IL_5VYC_1521/i3/151:154,
1/i3/164:167
Tandem non-canonical cWW pairs
Not in a motif group
geometric
IL_4WF9_109
IL_30621.2
IL_5VYC_1541/i3/316:321,
1/i3/330:334
No text annotation
Not in a motif group
IL_5VYC_1551/i3/359:364,
1/i3/396:403
Kink-turn with non-sequential stacking
Not in a motif group
homologous
IL_4V88_402
IL_45067.2
IL_5VYC_1561/i3/366:371,
1/i3/393:394
No text annotation
Not in a motif group
geometric
IL_5Y58_001
IL_48100.2
IL_5VYC_1571/i3/411:413,
1/i3/424:429
No text annotation
Not in a motif group
homologous
IL_4V88_404
IL_11347.1
IL_5VYC_1581/i3/436:439,
1/i3/454:457
Tandem non-canonical cWW pairs
Not in a motif group
geometric
IL_1D4R_001
IL_30621.2
IL_5VYC_1591/i3/491:495,
1/i3/508:509
C-loop
Not in a motif group
geometric
IL_5J7L_018
IL_75255.1
IL_5VYC_1601/i3/495:496,
1/i3/506:508
Single bulged G
Not in a motif group
geometric
IL_5J7L_019
IL_00225.2
IL_5VYC_1611/i3/599:608,
1/i3/635:637
No text annotation
Not in a motif group
IL_5VYC_1621/i3/610:617,
1/i3/624:633
No text annotation
Not in a motif group
IL_5VYC_1631/i3/663:665,
1/i3/1162:1164
No text annotation
Not in a motif group
geometric
IL_4KNQ_003
IL_95997.1
IL_5VYC_1641/i3/665:671,
1/i3/1161:1162
No text annotation
Not in a motif group
homologous
IL_4V88_416
IL_69996.1
IL_5VYC_1651/i3/673:676,
1/i3/1029:1032
Tandem non-canonical cWW pairs
Not in a motif group
geometric
IL_1MFQ_004
IL_30621.2
IL_5VYC_1661/i3/676:680,
1/i3/1025:1029
tSH-tHW-tHS
Not in a motif group
geometric
IL_4V88_418
IL_17136.1
IL_5VYC_1671/i3/805:807,
1/i3/856:858
No text annotation
Not in a motif group
homologous
IL_4V88_424
IL_95997.1
IL_5VYC_1681/i3/807:816,
1/i3/848:856
No text annotation
Not in a motif group
IL_5VYC_1691/i3/922:923,
1/i3/1019:1022
Major groove platform; stack outside cWW
Not in a motif group
geometric
IL_4V88_428
IL_50694.2
IL_5VYC_1701/i3/925:927,
1/i3/1014:1017
Isolated non-canonical cWW with bulges
Not in a motif group
geometric
IL_3TD0_005
IL_82068.2
IL_5VYC_1711/i3/927:931,
1/i3/1010:1014
No text annotation
Not in a motif group
geometric
IL_5TBW_121
IL_05145.2
IL_5VYC_1721/i3/931:935,
1/i3/1007:1010
Tandem non-canonical cWW pairs
Not in a motif group
homologous
IL_4V88_431
IL_30621.2
IL_5VYC_1731/i3/942:946,
1/i3/980:984
No text annotation
Not in a motif group
IL_5VYC_1741/i3/952:956,
1/i3/967:974
Kink-turn
Not in a motif group
homologous
IL_4V88_434
IL_45067.2
IL_5VYC_1751/i3/1042:1047,
1/i3/1071:1073
Other IL
Not in a motif group
geometric
IL_4V88_435
IL_22046.1
IL_5VYC_1761/i3/1047:1051,
1/i3/1067:1071
tSH-tHW-tHS
Not in a motif group
homologous
IL_4V88_436
IL_17136.1
IL_5VYC_1771/i3/1091:1093,
1/i3/1152:1158
No text annotation
Not in a motif group
homologous
IL_4V88_437
IL_19557.3
IL_5VYC_1781/i3/1098:1101,
1/i3/1131:1134
Tandem non-canonical cWW pairs
Not in a motif group
homologous
IL_4V88_438
IL_30621.2
IL_5VYC_1791/i3/1101:1103,
1/i3/1129:1131
No text annotation
Not in a motif group
geometric
IL_1YZ9_002
IL_95997.1
IL_5VYC_1801/i3/1108:1110,
1/i3/1123:1124
Minor groove platform
Not in a motif group
geometric
IL_4LFB_054
IL_93353.1
IL_5VYC_1811/i3/1168:1175,
1/i3/1186:1191
8x6 Sarcin-Ricin with inserted Y; G-bulge
Not in a motif group
homologous
IL_4V88_440
IL_24606.2
IL_5VYC_1821/i3/1203:1205,
1/i3/1693:1696
Isolated non-canonical cWW with bulges
Not in a motif group
geometric
IL_4V9F_097
IL_82068.2
IL_5VYC_1831/i3/1206:1208,
1/i3/1691:1692
Single bulged G
Not in a motif group
homologous
IL_4V88_442
IL_00225.2
IL_5VYC_1841/i3/1214:1217,
1/i3/1681:1685
C-loop
Not in a motif group
homologous
IL_4V88_443
IL_63596.6
IL_5VYC_1851/i3/1230:1232,
1/i3/1526:1528
No text annotation
Not in a motif group
homologous
IL_4V88_444
IL_95997.1
IL_5VYC_1861/i3/1235:1236,
1/i3/1521:1523
Minor groove platform
Not in a motif group
homologous
IL_4V88_445
IL_42622.2
IL_5VYC_1871/i3/1270:1272,
1/i3/1510:1512
No text annotation
Not in a motif group
homologous
IL_4V88_446
IL_95997.1
IL_5VYC_1881/i3/1272:1324,
1/i3/1504:1510
No text annotation
Not in a motif group
IL_5VYC_1891/i3/1325:1327,
1/i3/1502:1503
Single bulged U
Not in a motif group
homologous
IL_4V88_449
IL_83039.13
IL_5VYC_1901/i3/1329:1333,
1/i3/1498:1500
Isolated cWS basepair
Not in a motif group
homologous
IL_4V88_450
IL_76319.2
IL_5VYC_1911/i3/1333:1335,
1/i3/1492:1498
Minor groove platform with extra cWW
Not in a motif group
geometric
IL_4V88_451
IL_92788.2
IL_5VYC_1921/i3/1336:1338,
1/i3/1488:1491
No text annotation
Not in a motif group
geometric
IL_5TBW_008
IL_95997.1
IL_5VYC_1931/i3/1347:1349,
1/i3/1380:1382
Isolated cWH basepair
Not in a motif group
homologous
IL_4V88_453
IL_51629.2
IL_5VYC_1941/i3/1363:1365,
1/i3/1374:1375
Minor groove platform
Not in a motif group
geometric
IL_4V88_454
IL_93353.1
IL_5VYC_1951/i3/1536:1539,
1/i3/1594:1597
Tandem non-canonical cWW pairs
Not in a motif group
geometric
IL_4K27_001
IL_30621.2
IL_5VYC_1961/i3/1560:1562,
1/i3/1573:1575
No text annotation
Not in a motif group
geometric
IL_5TBW_016
IL_51629.2
IL_5VYC_1971/i3/1604:1610,
1/i3/1629:1635
No text annotation
Not in a motif group
IL_5VYC_1981/i3/1700:1702,
1/i3/1833:1836
No text annotation
Not in a motif group
homologous
IL_4V88_463
IL_36143.3
IL_5VYC_1991/i3/1702:1705,
1/i3/1829:1833
No text annotation
Not in a motif group
geometric
IL_4V88_464
IL_99670.1
IL_5VYC_2001/i3/1706:1708,
1/i3/1826:1828
No text annotation
Not in a motif group
homologous
IL_4V88_465
IL_95997.1
IL_5VYC_2011/i3/1708:1712,
1/i3/1821:1826
No text annotation
Not in a motif group
IL_5VYC_2021/i3/1713:1716,
1/i3/1817:1820
Tandem non-canonical cWW pairs
Not in a motif group
geometric
IL_5TBW_100
IL_30621.2
IL_5VYC_2031/i3/1717:1720,
1/i3/1813:1816
Double sheared
Not in a motif group
homologous
IL_4V88_468
IL_09705.9
IL_5VYC_2041/i3/1720:1723,
1/i3/1811:1813
No text annotation
Not in a motif group
IL_5VYC_2051/i3/1729:1732,
1/i3/1802:1805
Tandem non-canonical cWW pairs
Not in a motif group
geometric
IL_1D4R_001
IL_30621.2
IL_5VYC_2061/i3/1733:1736,
1/i3/1798:1801
Double sheared
Not in a motif group
homologous
IL_4V88_471
IL_09705.9
IL_5VYC_2071/i3/1739:1741,
1/i3/1793:1795
No text annotation
Not in a motif group
geometric
IL_4NGF_002
IL_95997.1
IL_5VYC_2081/i3/1742:1746,
1/i3/1788:1792
Triple sheared
Not in a motif group
homologous
IL_4V88_474
IL_56467.8
IL_5VYC_2091/i4/23:25,
1/i4/649:651
No text annotation
Not in a motif group
geometric
IL_4KR9_002
IL_51629.2
IL_5VYC_2101/i4/34:36,
1/i4/519:521
UC cWW
Not in a motif group
homologous
IL_4V88_385
IL_51629.2
IL_5VYC_2111/i4/37:40,
1/i4/514:518
Double sheared
Not in a motif group
geometric
IL_4WF9_016
IL_09705.9
IL_5VYC_2121/i4/41:47,
1/i4/479:481
No text annotation
Not in a motif group
geometric
IL_4V88_387
IL_33912.1
IL_5VYC_2131/i4/49:51,
1/i4/476:477
Minor groove platform
Not in a motif group
homologous
IL_4V88_388
IL_93353.1
IL_5VYC_2141/i4/57:62,
1/i4/86:88
No text annotation
Not in a motif group
homologous
IL_4V88_389
IL_95004.1
IL_5VYC_2151/i4/63:69,
1/i4/80:85
No text annotation
Not in a motif group
IL_5VYC_2161/i4/108:110,
1/i4/351:353
UU cWW
Not in a motif group
geometric
IL_4TS2_004
IL_95997.1
IL_5VYC_2171/i4/110:112,
1/i4/349:351
Isolated cWH basepair
Not in a motif group
geometric
IL_4J50_003
IL_51629.2
IL_5VYC_2181/i4/112:115,
1/i4/348:349
Multiple bulged bases
Not in a motif group
homologous
IL_4V88_392
IL_44546.1
IL_5VYC_2191/i4/116:121,
1/i4/343:347
No text annotation
Not in a motif group
homologous
IL_4V88_393
IL_64181.2
IL_5VYC_2201/i4/145:151,
1/i4/167:174
tWH-tWH-tHW-tHW
Not in a motif group
homologous
IL_4V88_394
IL_80604.2
IL_5VYC_2211/i4/151:154,
1/i4/164:167
Tandem non-canonical cWW pairs
Not in a motif group
geometric
IL_4WF9_109
IL_30621.2
IL_5VYC_2231/i4/359:364,
1/i4/396:403
Kink-turn with non-sequential stacking
Not in a motif group
homologous
IL_4V88_402
IL_45067.2
IL_5VYC_2241/i4/366:371,
1/i4/393:394
No text annotation
Not in a motif group
geometric
IL_5Y58_001
IL_48100.2
IL_5VYC_2251/i4/411:413,
1/i4/424:429
No text annotation
Not in a motif group
homologous
IL_4V88_404
IL_11347.1
IL_5VYC_2261/i4/436:439,
1/i4/454:457
Tandem non-canonical cWW pairs
Not in a motif group
geometric
IL_1D4R_001
IL_30621.2
IL_5VYC_2271/i4/491:495,
1/i4/508:509
C-loop
Not in a motif group
geometric
IL_5J7L_018
IL_75255.1
IL_5VYC_2281/i4/495:496,
1/i4/506:508
Single bulged G
Not in a motif group
geometric
IL_5J7L_019
IL_00225.2
IL_5VYC_2291/i4/599:608,
1/i4/635:637
No text annotation
Not in a motif group
IL_5VYC_2301/i4/610:617,
1/i4/624:633
No text annotation
Not in a motif group
IL_5VYC_2311/i4/663:665,
1/i4/1162:1164
No text annotation
Not in a motif group
geometric
IL_4KNQ_003
IL_95997.1
IL_5VYC_2321/i4/665:671,
1/i4/1161:1162
No text annotation
Not in a motif group
geometric
IL_4V88_416
IL_69996.1
IL_5VYC_2331/i4/673:676,
1/i4/1029:1032
Tandem non-canonical cWW pairs
Not in a motif group
geometric
IL_1MFQ_004
IL_30621.2
IL_5VYC_2341/i4/676:680,
1/i4/1025:1029
tSH-tHW-tHS
Not in a motif group
geometric
IL_4V88_418
IL_17136.1
IL_5VYC_2351/i4/805:807,
1/i4/856:858
No text annotation
Not in a motif group
homologous
IL_4V88_424
IL_95997.1
IL_5VYC_2361/i4/807:816,
1/i4/848:856
No text annotation
Not in a motif group
IL_5VYC_2371/i4/922:923,
1/i4/1019:1022
Major groove platform; stack outside cWW
Not in a motif group
geometric
IL_4V88_428
IL_50694.2
IL_5VYC_2381/i4/925:927,
1/i4/1014:1017
Isolated non-canonical cWW with bulges
Not in a motif group
geometric
IL_3TD0_005
IL_82068.2
IL_5VYC_2391/i4/927:931,
1/i4/1010:1014
No text annotation
Not in a motif group
geometric
IL_5TBW_121
IL_05145.2
IL_5VYC_2401/i4/931:935,
1/i4/1007:1010
Tandem non-canonical cWW pairs
Not in a motif group
geometric
IL_4V88_431
IL_30621.2
IL_5VYC_2411/i4/942:946,
1/i4/980:984
No text annotation
Not in a motif group
IL_5VYC_2421/i4/952:956,
1/i4/967:974
Kink-turn
Not in a motif group
homologous
IL_4V88_434
IL_45067.2
IL_5VYC_2431/i4/1042:1047,
1/i4/1071:1073
Other IL
Not in a motif group
geometric
IL_4V88_435
IL_22046.1
IL_5VYC_2441/i4/1047:1051,
1/i4/1067:1071
tSH-tHW-tHS
Not in a motif group
homologous
IL_4V88_436
IL_17136.1
IL_5VYC_2451/i4/1091:1093,
1/i4/1152:1158
No text annotation
Not in a motif group
homologous
IL_4V88_437
IL_19557.3
IL_5VYC_2461/i4/1098:1101,
1/i4/1131:1134
Tandem non-canonical cWW pairs
Not in a motif group
homologous
IL_4V88_438
IL_30621.2
IL_5VYC_2471/i4/1101:1103,
1/i4/1129:1131
No text annotation
Not in a motif group
geometric
IL_1YZ9_002
IL_95997.1
IL_5VYC_2481/i4/1108:1110,
1/i4/1123:1124
Minor groove platform
Not in a motif group
geometric
IL_4LFB_054
IL_93353.1
IL_5VYC_2491/i4/1168:1175,
1/i4/1186:1191
8x6 Sarcin-Ricin with inserted Y; G-bulge
Not in a motif group
homologous
IL_4V88_440
IL_24606.2
IL_5VYC_2501/i4/1203:1205,
1/i4/1693:1696
Isolated non-canonical cWW with bulges
Not in a motif group
geometric
IL_4V9F_097
IL_82068.2
IL_5VYC_2511/i4/1206:1208,
1/i4/1691:1692
Single bulged G
Not in a motif group
homologous
IL_4V88_442
IL_00225.2
IL_5VYC_2521/i4/1214:1217,
1/i4/1681:1685
C-loop
Not in a motif group
homologous
IL_4V88_443
IL_63596.6
IL_5VYC_2531/i4/1230:1232,
1/i4/1526:1528
No text annotation
Not in a motif group
homologous
IL_4V88_444
IL_95997.1
IL_5VYC_2541/i4/1235:1236,
1/i4/1521:1523
Minor groove platform
Not in a motif group
homologous
IL_4V88_445
IL_42622.2
IL_5VYC_2551/i4/1270:1272,
1/i4/1510:1512
No text annotation
Not in a motif group
geometric
IL_4M4O_002
IL_95997.1
IL_5VYC_2561/i4/1272:1324,
1/i4/1504:1510
No text annotation
Not in a motif group
IL_5VYC_2571/i4/1325:1327,
1/i4/1502:1503
Single bulged U
Not in a motif group
homologous
IL_4V88_449
IL_83039.13
IL_5VYC_2581/i4/1329:1333,
1/i4/1498:1500
No text annotation
Not in a motif group
geometric
IL_5ZTM_001
IL_95997.1
IL_5VYC_2591/i4/1333:1335,
1/i4/1492:1498
Minor groove platform with extra cWW
Not in a motif group
homologous
IL_4V88_451
IL_92788.2
IL_5VYC_2601/i4/1336:1338,
1/i4/1488:1491
No text annotation
Not in a motif group
geometric
IL_5TBW_008
IL_95997.1
IL_5VYC_2611/i4/1347:1349,
1/i4/1380:1382
Isolated cWH basepair
Not in a motif group
homologous
IL_4V88_453
IL_51629.2
IL_5VYC_2621/i4/1363:1365,
1/i4/1374:1375
Minor groove platform
Not in a motif group
homologous
IL_4V88_454
IL_93353.1
IL_5VYC_2631/i4/1536:1539,
1/i4/1594:1597
Tandem non-canonical cWW pairs
Not in a motif group
geometric
IL_4K27_001
IL_30621.2
IL_5VYC_2641/i4/1560:1562,
1/i4/1573:1575
No text annotation
Not in a motif group
geometric
IL_5TBW_016
IL_51629.2
IL_5VYC_2651/i4/1604:1610,
1/i4/1629:1635
No text annotation
Not in a motif group
IL_5VYC_2661/i4/1700:1702,
1/i4/1833:1836
No text annotation
Not in a motif group
homologous
IL_4V88_463
IL_36143.3
IL_5VYC_2671/i4/1702:1705,
1/i4/1829:1833
No text annotation
Not in a motif group
geometric
IL_4V88_464
IL_99670.1
IL_5VYC_2681/i4/1706:1708,
1/i4/1826:1828
No text annotation
Not in a motif group
homologous
IL_4V88_465
IL_95997.1
IL_5VYC_2691/i4/1708:1712,
1/i4/1821:1826
No text annotation
Not in a motif group
IL_5VYC_2701/i4/1713:1716,
1/i4/1817:1820
Tandem non-canonical cWW pairs
Not in a motif group
geometric
IL_5TBW_100
IL_30621.2
IL_5VYC_2711/i4/1717:1720,
1/i4/1813:1816
Double sheared
Not in a motif group
homologous
IL_4V88_468
IL_09705.9
IL_5VYC_2721/i4/1720:1723,
1/i4/1811:1813
No text annotation
Not in a motif group
IL_5VYC_2731/i4/1729:1732,
1/i4/1802:1805
Tandem non-canonical cWW pairs
Not in a motif group
geometric
IL_1D4R_001
IL_30621.2
IL_5VYC_2741/i4/1733:1736,
1/i4/1798:1801
Double sheared
Not in a motif group
homologous
IL_4V88_471
IL_09705.9
IL_5VYC_2751/i4/1739:1741,
1/i4/1793:1795
No text annotation
Not in a motif group
geometric
IL_4NGF_002
IL_95997.1
IL_5VYC_2761/i4/1742:1746,
1/i4/1788:1792
Triple sheared
Not in a motif group
homologous
IL_4V88_474
IL_56467.8
IL_5VYC_2771/i5/23:25,
1/i5/649:651
No text annotation
Not in a motif group
geometric
IL_4KR9_002
IL_51629.2
IL_5VYC_2781/i5/34:36,
1/i5/519:521
UC cWW
Not in a motif group
homologous
IL_4V88_385
IL_51629.2
IL_5VYC_2791/i5/37:40,
1/i5/514:518
Double sheared
Not in a motif group
geometric
IL_4WF9_016
IL_09705.9
IL_5VYC_2801/i5/41:47,
1/i5/479:481
No text annotation
Not in a motif group
geometric
IL_4V88_387
IL_33912.1
IL_5VYC_2811/i5/49:51,
1/i5/476:477
Minor groove platform
Not in a motif group
homologous
IL_4V88_388
IL_93353.1
IL_5VYC_2821/i5/57:62,
1/i5/86:88
No text annotation
Not in a motif group
homologous
IL_4V88_389
IL_95004.1
IL_5VYC_2831/i5/63:69,
1/i5/80:85
No text annotation
Not in a motif group
IL_5VYC_2841/i5/108:110,
1/i5/351:353
UU cWW
Not in a motif group
geometric
IL_4TS2_004
IL_95997.1
IL_5VYC_2851/i5/110:112,
1/i5/349:351
Isolated cWH basepair
Not in a motif group
geometric
IL_4J50_003
IL_51629.2
IL_5VYC_2861/i5/112:115,
1/i5/348:349
Multiple bulged bases
Not in a motif group
geometric
IL_4V88_392
IL_44546.1
IL_5VYC_2871/i5/116:121,
1/i5/343:347
No text annotation
Not in a motif group
homologous
IL_4V88_393
IL_64181.2
IL_5VYC_2881/i5/145:151,
1/i5/167:174
tWH-tWH-tHW-tHW
Not in a motif group
homologous
IL_4V88_394
IL_80604.2
IL_5VYC_2891/i5/151:154,
1/i5/164:167
Tandem non-canonical cWW pairs
Not in a motif group
geometric
IL_4WF9_109
IL_30621.2
IL_5VYC_2901/i5/188:192,
1/i5/207:211
No text annotation
Not in a motif group
IL_5VYC_2921/i5/359:364,
1/i5/396:403
Kink-turn with non-sequential stacking
Not in a motif group
homologous
IL_4V88_402
IL_45067.2
IL_5VYC_2931/i5/366:371,
1/i5/393:394
No text annotation
Not in a motif group
geometric
IL_5Y58_001
IL_48100.2
IL_5VYC_2941/i5/411:413,
1/i5/424:429
No text annotation
Not in a motif group
homologous
IL_4V88_404
IL_11347.1
IL_5VYC_2951/i5/436:439,
1/i5/454:457
Tandem non-canonical cWW pairs
Not in a motif group
geometric
IL_1D4R_001
IL_30621.2
IL_5VYC_2961/i5/491:495,
1/i5/508:509
C-loop
Not in a motif group
geometric
IL_5J7L_018
IL_75255.1
IL_5VYC_2971/i5/495:496,
1/i5/506:508
Single bulged G
Not in a motif group
geometric
IL_5J7L_019
IL_00225.2
IL_5VYC_2981/i5/599:608,
1/i5/635:637
No text annotation
Not in a motif group
IL_5VYC_2991/i5/610:617,
1/i5/624:633
No text annotation
Not in a motif group
IL_5VYC_3001/i5/663:665,
1/i5/1162:1164
No text annotation
Not in a motif group
geometric
IL_4KNQ_003
IL_95997.1
IL_5VYC_3011/i5/665:671,
1/i5/1161:1162
No text annotation
Not in a motif group
homologous
IL_4V88_416
IL_69996.1
IL_5VYC_3021/i5/673:676,
1/i5/1029:1032
Tandem non-canonical cWW pairs
Not in a motif group
geometric
IL_1MFQ_004
IL_30621.2
IL_5VYC_3031/i5/676:680,
1/i5/1025:1029
tSH-tHW-tHS
Not in a motif group
homologous
IL_4V88_418
IL_17136.1
IL_5VYC_3041/i5/805:807,
1/i5/856:858
No text annotation
Not in a motif group
homologous
IL_4V88_424
IL_95997.1
IL_5VYC_3051/i5/807:816,
1/i5/848:856
No text annotation
Not in a motif group
IL_5VYC_3061/i5/922:923,
1/i5/1019:1022
Major groove platform; stack outside cWW
Not in a motif group
homologous
IL_4V88_428
IL_50694.2
IL_5VYC_3071/i5/925:927,
1/i5/1014:1017
Isolated non-canonical cWW with bulges
Not in a motif group
geometric
IL_3TD0_005
IL_82068.2
IL_5VYC_3081/i5/927:931,
1/i5/1010:1014
No text annotation
Not in a motif group
geometric
IL_5TBW_121
IL_05145.2
IL_5VYC_3091/i5/931:935,
1/i5/1007:1010
Tandem non-canonical cWW pairs
Not in a motif group
homologous
IL_4V88_431
IL_30621.2
IL_5VYC_3101/i5/942:946,
1/i5/980:984
No text annotation
Not in a motif group
IL_5VYC_3111/i5/952:956,
1/i5/967:974
Kink-turn
Not in a motif group
homologous
IL_4V88_434
IL_45067.2
IL_5VYC_3121/i5/1042:1047,
1/i5/1071:1073
Other IL
Not in a motif group
homologous
IL_4V88_435
IL_22046.1
IL_5VYC_3131/i5/1047:1051,
1/i5/1067:1071
tSH-tHW-tHS
Not in a motif group
geometric
IL_4LFB_033
IL_17136.1
IL_5VYC_3141/i5/1091:1093,
1/i5/1152:1158
No text annotation
Not in a motif group
homologous
IL_4V88_437
IL_19557.3
IL_5VYC_3151/i5/1098:1101,
1/i5/1131:1134
Tandem non-canonical cWW pairs
Not in a motif group
geometric
IL_4V88_438
IL_30621.2
IL_5VYC_3161/i5/1101:1103,
1/i5/1129:1131
No text annotation
Not in a motif group
geometric
IL_1YZ9_002
IL_95997.1
IL_5VYC_3171/i5/1108:1110,
1/i5/1123:1124
Minor groove platform
Not in a motif group
geometric
IL_4LFB_054
IL_93353.1
IL_5VYC_3181/i5/1168:1175,
1/i5/1186:1191
8x6 Sarcin-Ricin with inserted Y; G-bulge
Not in a motif group
homologous
IL_4V88_440
IL_24606.2
IL_5VYC_3191/i5/1203:1205,
1/i5/1693:1696
Isolated non-canonical cWW with bulges
Not in a motif group
geometric
IL_4V9F_097
IL_82068.2
IL_5VYC_3201/i5/1206:1208,
1/i5/1691:1692
Single bulged G
Not in a motif group
homologous
IL_4V88_442
IL_00225.2
IL_5VYC_3211/i5/1214:1217,
1/i5/1681:1685
C-loop
Not in a motif group
homologous
IL_4V88_443
IL_63596.6
IL_5VYC_3221/i5/1230:1232,
1/i5/1526:1528
No text annotation
Not in a motif group
homologous
IL_4V88_444
IL_95997.1
IL_5VYC_3231/i5/1235:1236,
1/i5/1521:1523
Minor groove platform
Not in a motif group
homologous
IL_4V88_445
IL_42622.2
IL_5VYC_3241/i5/1270:1272,
1/i5/1510:1512
No text annotation
Not in a motif group
geometric
IL_4M4O_002
IL_95997.1
IL_5VYC_3251/i5/1272:1324,
1/i5/1504:1510
No text annotation
Not in a motif group
IL_5VYC_3261/i5/1325:1327,
1/i5/1502:1503
Single bulged U
Not in a motif group
homologous
IL_4V88_449
IL_83039.13
IL_5VYC_3271/i5/1329:1333,
1/i5/1498:1500
No text annotation
Not in a motif group
geometric
IL_5ZTM_001
IL_95997.1
IL_5VYC_3281/i5/1333:1335,
1/i5/1492:1498
Minor groove platform with extra cWW
Not in a motif group
homologous
IL_4V88_451
IL_92788.2
IL_5VYC_3291/i5/1336:1338,
1/i5/1488:1491
No text annotation
Not in a motif group
geometric
IL_5TBW_008
IL_95997.1
IL_5VYC_3301/i5/1347:1349,
1/i5/1380:1382
Isolated cWH basepair
Not in a motif group
homologous
IL_4V88_453
IL_51629.2
IL_5VYC_3311/i5/1363:1365,
1/i5/1374:1375
Minor groove platform
Not in a motif group
geometric
IL_4V88_454
IL_93353.1
IL_5VYC_3321/i5/1536:1539,
1/i5/1594:1597
Tandem non-canonical cWW pairs
Not in a motif group
geometric
IL_4K27_001
IL_30621.2
IL_5VYC_3331/i5/1560:1562,
1/i5/1573:1575
No text annotation
Not in a motif group
geometric
IL_5TBW_016
IL_51629.2
IL_5VYC_3341/i5/1604:1610,
1/i5/1629:1635
No text annotation
Not in a motif group
homologous
IL_8C3A_469
IL_10092.1
IL_5VYC_3351/i5/1700:1702,
1/i5/1833:1836
No text annotation
Not in a motif group
homologous
IL_4V88_463
IL_36143.3
IL_5VYC_3361/i5/1702:1705,
1/i5/1829:1833
No text annotation
Not in a motif group
geometric
IL_4V88_464
IL_99670.1
IL_5VYC_3371/i5/1706:1708,
1/i5/1826:1828
No text annotation
Not in a motif group
geometric
IL_1U9S_007
IL_95997.1
IL_5VYC_3381/i5/1708:1712,
1/i5/1821:1826
No text annotation
Not in a motif group
IL_5VYC_3391/i5/1713:1716,
1/i5/1817:1820
Tandem non-canonical cWW pairs
Not in a motif group
geometric
IL_5TBW_100
IL_30621.2
IL_5VYC_3401/i5/1717:1720,
1/i5/1813:1816
Double sheared
Not in a motif group
geometric
IL_4V88_468
IL_09705.9
IL_5VYC_3411/i5/1720:1723,
1/i5/1811:1813
No text annotation
Not in a motif group
IL_5VYC_3421/i5/1729:1732,
1/i5/1802:1805
Tandem non-canonical cWW pairs
Not in a motif group
geometric
IL_1D4R_001
IL_30621.2
IL_5VYC_3431/i5/1733:1736,
1/i5/1798:1801
Double sheared
Not in a motif group
homologous
IL_4V88_471
IL_09705.9
IL_5VYC_3441/i5/1739:1741,
1/i5/1793:1795
No text annotation
Not in a motif group
geometric
IL_4NGF_002
IL_95997.1
IL_5VYC_3451/i5/1742:1746,
1/i5/1788:1792
Triple sheared
Not in a motif group
homologous
IL_4V88_474
IL_56467.8
IL_5VYC_3461/i6/23:25,
1/i6/649:651
No text annotation
Not in a motif group
geometric
IL_4KR9_002
IL_51629.2
IL_5VYC_3471/i6/34:36,
1/i6/519:521
UC cWW
Not in a motif group
homologous
IL_4V88_385
IL_51629.2
IL_5VYC_3481/i6/37:40,
1/i6/514:518
Double sheared
Not in a motif group
geometric
IL_4WF9_016
IL_09705.9
IL_5VYC_3491/i6/41:47,
1/i6/479:481
No text annotation
Not in a motif group
geometric
IL_4V88_387
IL_33912.1
IL_5VYC_3501/i6/49:51,
1/i6/476:477
Minor groove platform
Not in a motif group
homologous
IL_4V88_388
IL_93353.1
IL_5VYC_3511/i6/57:62,
1/i6/86:88
No text annotation
Not in a motif group
homologous
IL_4V88_389
IL_95004.1
IL_5VYC_3521/i6/63:69,
1/i6/80:85
No text annotation
Not in a motif group
IL_5VYC_3531/i6/108:110,
1/i6/351:353
UU cWW
Not in a motif group
geometric
IL_4TS2_004
IL_95997.1
IL_5VYC_3541/i6/110:112,
1/i6/349:351
Isolated cWH basepair
Not in a motif group
geometric
IL_4J50_003
IL_51629.2
IL_5VYC_3551/i6/112:115,
1/i6/348:349
Multiple bulged bases
Not in a motif group
geometric
IL_4V88_392
IL_44546.1
IL_5VYC_3561/i6/116:121,
1/i6/343:347
No text annotation
Not in a motif group
homologous
IL_4V88_393
IL_64181.2
IL_5VYC_3571/i6/145:151,
1/i6/167:174
tWH-tWH-tHW-tHW
Not in a motif group
homologous
IL_4V88_394
IL_80604.2
IL_5VYC_3581/i6/151:154,
1/i6/164:167
Tandem non-canonical cWW pairs
Not in a motif group
geometric
IL_4WF9_109
IL_30621.2
IL_5VYC_3591/i6/188:192,
1/i6/207:211
No text annotation
Not in a motif group
IL_5VYC_3611/i6/359:364,
1/i6/396:403
Kink-turn with non-sequential stacking
Not in a motif group
homologous
IL_4V88_402
IL_45067.2
IL_5VYC_3621/i6/366:371,
1/i6/393:394
No text annotation
Not in a motif group
geometric
IL_5Y58_001
IL_48100.2
IL_5VYC_3631/i6/411:413,
1/i6/424:429
No text annotation
Not in a motif group
homologous
IL_4V88_404
IL_11347.1
IL_5VYC_3641/i6/436:439,
1/i6/454:457
Tandem non-canonical cWW pairs
Not in a motif group
geometric
IL_1D4R_001
IL_30621.2
IL_5VYC_3651/i6/491:495,
1/i6/508:509
C-loop
Not in a motif group
geometric
IL_5J7L_018
IL_75255.1
IL_5VYC_3661/i6/495:496,
1/i6/506:508
Single bulged G
Not in a motif group
geometric
IL_5J7L_019
IL_00225.2
IL_5VYC_3671/i6/527:531,
1/i6/553:558
No text annotation
Not in a motif group
IL_5VYC_3681/i6/599:608,
1/i6/635:637
No text annotation
Not in a motif group
IL_5VYC_3691/i6/610:617,
1/i6/624:633
No text annotation
Not in a motif group
IL_5VYC_3701/i6/663:665,
1/i6/1162:1164
No text annotation
Not in a motif group
geometric
IL_4KNQ_003
IL_95997.1
IL_5VYC_3711/i6/665:671,
1/i6/1161:1162
No text annotation
Not in a motif group
geometric
IL_4V88_416
IL_69996.1
IL_5VYC_3721/i6/673:676,
1/i6/1029:1032
Tandem non-canonical cWW pairs
Not in a motif group
geometric
IL_1MFQ_004
IL_30621.2
IL_5VYC_3731/i6/676:680,
1/i6/1025:1029
tSH-tHW-tHS
Not in a motif group
geometric
IL_4V88_418
IL_17136.1
IL_5VYC_3741/i6/805:807,
1/i6/856:858
No text annotation
Not in a motif group
homologous
IL_4V88_424
IL_95997.1
IL_5VYC_3751/i6/807:816,
1/i6/848:856
No text annotation
Not in a motif group
IL_5VYC_3761/i6/922:923,
1/i6/1019:1022
Major groove platform; stack outside cWW
Not in a motif group
geometric
IL_4V88_428
IL_50694.2
IL_5VYC_3771/i6/925:927,
1/i6/1014:1017
Isolated non-canonical cWW with bulges
Not in a motif group
geometric
IL_3TD0_005
IL_82068.2
IL_5VYC_3781/i6/927:931,
1/i6/1010:1014
No text annotation
Not in a motif group
geometric
IL_5TBW_121
IL_05145.2
IL_5VYC_3791/i6/931:935,
1/i6/1007:1010
Tandem non-canonical cWW pairs
Not in a motif group
geometric
IL_4V88_431
IL_30621.2
IL_5VYC_3801/i6/942:946,
1/i6/980:984
No text annotation
Not in a motif group
IL_5VYC_3811/i6/952:956,
1/i6/967:974
Kink-turn
Not in a motif group
homologous
IL_4V88_434
IL_45067.2
IL_5VYC_3821/i6/1042:1047,
1/i6/1071:1073
Other IL
Not in a motif group
geometric
IL_4V88_435
IL_22046.1
IL_5VYC_3831/i6/1047:1051,
1/i6/1067:1071
tSH-tHW-tHS
Not in a motif group
homologous
IL_4V88_436
IL_17136.1
IL_5VYC_3841/i6/1091:1093,
1/i6/1152:1158
No text annotation
Not in a motif group
homologous
IL_4V88_437
IL_19557.3
IL_5VYC_3851/i6/1098:1101,
1/i6/1131:1134
Tandem non-canonical cWW pairs
Not in a motif group
homologous
IL_4V88_438
IL_30621.2
IL_5VYC_3861/i6/1101:1103,
1/i6/1129:1131
No text annotation
Not in a motif group
geometric
IL_1YZ9_002
IL_95997.1
IL_5VYC_3871/i6/1108:1110,
1/i6/1123:1124
Minor groove platform
Not in a motif group
geometric
IL_4LFB_054
IL_93353.1
IL_5VYC_3881/i6/1168:1175,
1/i6/1186:1191
8x6 Sarcin-Ricin with inserted Y; G-bulge
Not in a motif group
homologous
IL_4V88_440
IL_24606.2
IL_5VYC_3891/i6/1203:1205,
1/i6/1693:1696
Isolated non-canonical cWW with bulges
Not in a motif group
geometric
IL_4V9F_097
IL_82068.2
IL_5VYC_3901/i6/1206:1208,
1/i6/1691:1692
Single bulged G
Not in a motif group
homologous
IL_4V88_442
IL_00225.2
IL_5VYC_3911/i6/1214:1217,
1/i6/1681:1685
C-loop
Not in a motif group
homologous
IL_4V88_443
IL_63596.6
IL_5VYC_3921/i6/1230:1232,
1/i6/1526:1528
No text annotation
Not in a motif group
homologous
IL_4V88_444
IL_95997.1
IL_5VYC_3931/i6/1235:1236,
1/i6/1521:1523
Minor groove platform
Not in a motif group
homologous
IL_4V88_445
IL_42622.2
IL_5VYC_3941/i6/1270:1272,
1/i6/1510:1512
No text annotation
Not in a motif group
homologous
IL_4V88_446
IL_95997.1
IL_5VYC_3951/i6/1272:1324,
1/i6/1504:1510
No text annotation
Not in a motif group
IL_5VYC_3961/i6/1325:1327,
1/i6/1502:1503
Single bulged U
Not in a motif group
homologous
IL_4V88_449
IL_83039.13
IL_5VYC_3971/i6/1329:1333,
1/i6/1498:1500
No text annotation
Not in a motif group
geometric
IL_5ZTM_001
IL_95997.1
IL_5VYC_3981/i6/1333:1335,
1/i6/1492:1498
Minor groove platform with extra cWW
Not in a motif group
homologous
IL_4V88_451
IL_92788.2
IL_5VYC_3991/i6/1336:1338,
1/i6/1488:1491
No text annotation
Not in a motif group
geometric
IL_5TBW_008
IL_95997.1
IL_5VYC_4001/i6/1347:1349,
1/i6/1380:1382
Isolated cWH basepair
Not in a motif group
homologous
IL_4V88_453
IL_51629.2
IL_5VYC_4011/i6/1363:1365,
1/i6/1374:1375
Minor groove platform
Not in a motif group
geometric
IL_4V88_454
IL_93353.1
IL_5VYC_4021/i6/1536:1539,
1/i6/1594:1597
Tandem non-canonical cWW pairs
Not in a motif group
geometric
IL_4K27_001
IL_30621.2
IL_5VYC_4031/i6/1560:1562,
1/i6/1573:1575
No text annotation
Not in a motif group
geometric
IL_5TBW_016
IL_51629.2
IL_5VYC_4041/i6/1604:1610,
1/i6/1629:1635
No text annotation
Not in a motif group
IL_5VYC_4051/i6/1700:1702,
1/i6/1833:1836
No text annotation
Not in a motif group
geometric
IL_4V88_463
IL_36143.3
IL_5VYC_4061/i6/1702:1705,
1/i6/1829:1833
No text annotation
Not in a motif group
homologous
IL_4V88_464
IL_99670.1
IL_5VYC_4071/i6/1706:1708,
1/i6/1826:1828
No text annotation
Not in a motif group
geometric
IL_1U9S_007
IL_95997.1
IL_5VYC_4081/i6/1708:1712,
1/i6/1821:1826
No text annotation
Not in a motif group
IL_5VYC_4091/i6/1713:1716,
1/i6/1817:1820
Tandem non-canonical cWW pairs
Not in a motif group
geometric
IL_5TBW_100
IL_30621.2
IL_5VYC_4101/i6/1717:1720,
1/i6/1813:1816
Double sheared
Not in a motif group
geometric
IL_4V88_468
IL_09705.9
IL_5VYC_4111/i6/1720:1723,
1/i6/1811:1813
No text annotation
Not in a motif group
IL_5VYC_4121/i6/1729:1732,
1/i6/1802:1805
Tandem non-canonical cWW pairs
Not in a motif group
geometric
IL_1D4R_001
IL_30621.2
IL_5VYC_4131/i6/1733:1736,
1/i6/1798:1801
Double sheared
Not in a motif group
homologous
IL_4V88_471
IL_09705.9
IL_5VYC_4141/i6/1739:1741,
1/i6/1793:1795
No text annotation
Not in a motif group
geometric
IL_4NGF_002
IL_95997.1
IL_5VYC_4151/i6/1742:1746,
1/i6/1788:1792
Triple sheared
Not in a motif group
homologous
IL_4V88_474
IL_56467.8

Problematic loops

#loop idProblemSequence
IL_5VYC_015No text annotation
IL_5VYC_084No text annotation
IL_5VYC_153No text annotation
IL_5VYC_222No text annotation
IL_5VYC_291No text annotation
IL_5VYC_360No text annotation

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
J3_5VYC_0011/i1/40:41,
1/i1/481:489,
1/i1/511:514
No text annotation
Not in a motif group
J3_5VYC_0021/i1/682:685,
1/i1/917:922,
1/i1/1022:1023
No text annotation
Not in a motif group
J3_5VYC_0031/i1/938:941,
1/i1/985:993,
1/i1/1000:1004
No text annotation
Not in a motif group
homologous
J3_4V88_033
NA
J3_5VYC_0041/i1/1094:1096,
1/i1/1136:1140,
1/i1/1147:1151
No text annotation
Not in a motif group
J3_5VYC_0051/i1/1224:1229,
1/i1/1529:1532,
1/i1/1638:1642
No text annotation
Not in a motif group
J3_5VYC_0061/i1/1339:1345,
1/i1/1384:1389,
1/i1/1481:1487
No text annotation
Not in a motif group
J3_5VYC_0071/i1/1350:1351,
1/i1/1360:1363,
1/i1/1375:1379
No text annotation
Not in a motif group
J3_5VYC_0081/i1/1532:1536,
1/i1/1597:1604,
1/i1/1635:1638
No text annotation
Not in a motif group
homologous
J3_4V88_041
NA
J3_5VYC_0091/i2/40:41,
1/i2/481:489,
1/i2/511:514
No text annotation
Not in a motif group
J3_5VYC_0101/i2/682:685,
1/i2/917:922,
1/i2/1022:1023
No text annotation
Not in a motif group
J3_5VYC_0111/i2/938:941,
1/i2/985:993,
1/i2/1000:1004
No text annotation
Not in a motif group
homologous
J3_4V88_033
NA
J3_5VYC_0121/i2/1094:1096,
1/i2/1136:1140,
1/i2/1147:1151
No text annotation
Not in a motif group
J3_5VYC_0131/i2/1224:1229,
1/i2/1529:1532,
1/i2/1638:1642
No text annotation
Not in a motif group
J3_5VYC_0141/i2/1339:1345,
1/i2/1384:1389,
1/i2/1481:1487
No text annotation
Not in a motif group
J3_5VYC_0151/i2/1350:1351,
1/i2/1360:1363,
1/i2/1375:1379
No text annotation
Not in a motif group
J3_5VYC_0161/i2/1532:1536,
1/i2/1597:1604,
1/i2/1635:1638
No text annotation
Not in a motif group
homologous
J3_4V88_041
NA
J3_5VYC_0171/i3/40:41,
1/i3/481:489,
1/i3/511:514
No text annotation
Not in a motif group
J3_5VYC_0181/i3/682:685,
1/i3/917:922,
1/i3/1022:1023
No text annotation
Not in a motif group
J3_5VYC_0191/i3/938:941,
1/i3/985:993,
1/i3/1000:1004
No text annotation
Not in a motif group
homologous
J3_4V88_033
NA
J3_5VYC_0201/i3/1094:1096,
1/i3/1136:1140,
1/i3/1147:1151
No text annotation
Not in a motif group
J3_5VYC_0211/i3/1224:1229,
1/i3/1529:1532,
1/i3/1638:1642
No text annotation
Not in a motif group
J3_5VYC_0221/i3/1339:1345,
1/i3/1384:1389,
1/i3/1481:1487
No text annotation
Not in a motif group
J3_5VYC_0231/i3/1350:1351,
1/i3/1360:1363,
1/i3/1375:1379
No text annotation
Not in a motif group
J3_5VYC_0241/i3/1532:1536,
1/i3/1597:1604,
1/i3/1635:1638
No text annotation
Not in a motif group
J3_5VYC_0251/i4/40:41,
1/i4/481:489,
1/i4/511:514
No text annotation
Not in a motif group
J3_5VYC_0261/i4/682:685,
1/i4/917:922,
1/i4/1022:1023
No text annotation
Not in a motif group
J3_5VYC_0271/i4/938:941,
1/i4/985:993,
1/i4/1000:1004
No text annotation
Not in a motif group
homologous
J3_4V88_033
NA
J3_5VYC_0281/i4/1094:1096,
1/i4/1136:1140,
1/i4/1147:1151
No text annotation
Not in a motif group
J3_5VYC_0291/i4/1224:1229,
1/i4/1529:1532,
1/i4/1638:1642
No text annotation
Not in a motif group
J3_5VYC_0301/i4/1339:1345,
1/i4/1384:1389,
1/i4/1481:1487
No text annotation
Not in a motif group
J3_5VYC_0311/i4/1350:1351,
1/i4/1360:1363,
1/i4/1375:1379
No text annotation
Not in a motif group
J3_5VYC_0321/i4/1532:1536,
1/i4/1597:1604,
1/i4/1635:1638
No text annotation
Not in a motif group
homologous
J3_4V88_041
NA
J3_5VYC_0331/i5/40:41,
1/i5/481:489,
1/i5/511:514
No text annotation
Not in a motif group
J3_5VYC_0341/i5/682:685,
1/i5/917:922,
1/i5/1022:1023
No text annotation
Not in a motif group
J3_5VYC_0351/i5/938:941,
1/i5/985:993,
1/i5/1000:1004
No text annotation
Not in a motif group
homologous
J3_4V88_033
NA
J3_5VYC_0361/i5/1094:1096,
1/i5/1136:1140,
1/i5/1147:1151
No text annotation
Not in a motif group
J3_5VYC_0371/i5/1224:1229,
1/i5/1529:1532,
1/i5/1638:1642
No text annotation
Not in a motif group
J3_5VYC_0381/i5/1339:1345,
1/i5/1384:1389,
1/i5/1481:1487
No text annotation
Not in a motif group
J3_5VYC_0391/i5/1350:1351,
1/i5/1360:1363,
1/i5/1375:1379
No text annotation
Not in a motif group
J3_5VYC_0401/i5/1532:1536,
1/i5/1597:1604,
1/i5/1635:1638
No text annotation
Not in a motif group
homologous
J3_4V88_041
NA
J3_5VYC_0411/i6/40:41,
1/i6/481:489,
1/i6/511:514
No text annotation
Not in a motif group
J3_5VYC_0421/i6/682:685,
1/i6/917:922,
1/i6/1022:1023
No text annotation
Not in a motif group
J3_5VYC_0431/i6/938:941,
1/i6/985:993,
1/i6/1000:1004
No text annotation
Not in a motif group
homologous
J3_4V88_033
NA
J3_5VYC_0441/i6/1094:1096,
1/i6/1136:1140,
1/i6/1147:1151
No text annotation
Not in a motif group
J3_5VYC_0451/i6/1224:1229,
1/i6/1529:1532,
1/i6/1638:1642
No text annotation
Not in a motif group
J3_5VYC_0461/i6/1339:1345,
1/i6/1384:1389,
1/i6/1481:1487
No text annotation
Not in a motif group
J3_5VYC_0471/i6/1350:1351,
1/i6/1360:1363,
1/i6/1375:1379
No text annotation
Not in a motif group
J3_5VYC_0481/i6/1532:1536,
1/i6/1597:1604,
1/i6/1635:1638
No text annotation
Not in a motif group

Problematic loops

No problematic loops


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