Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
HL_4WF1_0011/AA/12:22No text annotation
Not in a motif group
homologous
HL_5J7L_001
HL_89881.2
HL_4WF1_0021/AA/76:93No text annotation
Not in a motif group
HL_4WF1_0031/AA/158:163GNRA
Not in a motif group
homologous
HL_5J7L_003
HL_42097.1
HL_4WF1_0041/AA/186:191GNRA
Not in a motif group
homologous
HL_5J7L_004
HL_42097.1
HL_4WF1_0051/AA/206:213No text annotation
Not in a motif group
HL_4WF1_0061/AA/259:267No text annotation
Not in a motif group
homologous
HL_5J7L_006
HL_69023.2
HL_4WF1_0071/AA/296:301GNRA
Not in a motif group
homologous
HL_5J7L_007
HL_42097.1
HL_4WF1_0081/AA/320:333No text annotation
Not in a motif group
homologous
HL_5J7L_008
HL_81205.2
HL_4WF1_0091/AA/342:347UNCG
Not in a motif group
homologous
HL_5J7L_009
HL_03562.2
HL_4WF1_0101/AA/379:384GNRA
Not in a motif group
homologous
HL_5J7L_010
HL_42097.1
HL_4WF1_0111/AA/419:424UNCG
Not in a motif group
homologous
HL_4LFB_011
HL_03562.2
HL_4WF1_0121/AA/462:470No text annotation
Not in a motif group
homologous
HL_5J7L_012
HL_84085.2
HL_4WF1_0131/AA/522:527No text annotation
Not in a motif group
geometric
HL_4WF9_003
HL_75407.1
HL_4WF1_0141/AA/617:623No text annotation
Not in a motif group
homologous
HL_5J7L_014
HL_26881.1
HL_4WF1_0151/AA/689:698No text annotation
Not in a motif group
homologous
HL_5J7L_015
HL_12326.1
HL_4WF1_0161/AA/726:731Other HL
Not in a motif group
homologous
HL_5J7L_016
HL_87030.2
HL_4WF1_0171/AA/786:796No text annotation
Not in a motif group
homologous
HL_5J7L_017
HL_12326.1
HL_4WF1_0181/AA/840:846No text annotation
Not in a motif group
HL_4WF1_0191/AA/862:867GNRA
Not in a motif group
homologous
HL_5J7L_019
HL_42097.1
HL_4WF1_0201/AA/897:902GNRA
Not in a motif group
homologous
HL_4LFB_020
HL_42097.1
HL_4WF1_0211/AA/963:972No text annotation
Not in a motif group
homologous
HL_5J7L_021
NA
HL_4WF1_0221/AA/1012:1017GNRA
Not in a motif group
homologous
HL_4LFB_022
HL_42097.1
HL_4WF1_0241/AA/1076:1081GNRA
Not in a motif group
homologous
HL_5J7L_023
HL_42097.1
HL_4WF1_0251/AA/1089:1096No text annotation
Not in a motif group
homologous
HL_5J7L_024
HL_71554.2
HL_4WF1_0261/AA/1134:1140No text annotation
Not in a motif group
homologous
HL_5J7L_025
HL_03562.2
HL_4WF1_0271/AA/1165:1171No text annotation
Not in a motif group
homologous
HL_5J7L_026
HL_90617.2
HL_4WF1_0281/AA/1265:1270GNRA
Not in a motif group
homologous
HL_5J7L_027
HL_42097.1
HL_4WF1_0291/AA/1314:1323No text annotation
Not in a motif group
homologous
HL_5J7L_028
HL_89380.2
HL_4WF1_0301/AA/1356:1366No text annotation
Not in a motif group
homologous
HL_5J7L_029
HL_96366.1
HL_4WF1_0311/AA/1449:1454UNCG
Not in a motif group
homologous
HL_4LFB_031
HL_03562.2
HL_4WF1_0321/AA/1515:1520No text annotation
Not in a motif group
homologous
HL_6CZR_103
NA
HL_4WF1_0331/BA/59:68No text annotation
Not in a motif group
homologous
HL_5J7L_134
HL_18177.1
HL_4WF1_0341/BA/87:95No text annotation
Not in a motif group
homologous
HL_5J7L_135
HL_84193.1
HL_4WF1_0351/BA/123:128No text annotation
Not in a motif group
homologous
HL_5J7L_136
HL_75407.1
HL_4WF1_0361/BA/136:143No text annotation
Not in a motif group
HL_4WF1_0371/BA/158:168No text annotation
Not in a motif group
homologous
HL_5J7L_138
HL_81820.1
HL_4WF1_0381/BA/194:201No text annotation
Not in a motif group
homologous
HL_7RQB_006
HL_06192.2
HL_4WF1_0391/BA/225:230No text annotation
Not in a motif group
homologous
HL_5J7L_140
HL_27930.1
HL_4WF1_0401/BA/246:252No text annotation
Not in a motif group
homologous
HL_5J7L_141
HL_67216.7
HL_4WF1_0411/BA/305:312T-loop with 1 bulged base
Not in a motif group
homologous
HL_5J7L_142
HL_89380.2
HL_4WF1_0421/BA/319:323No text annotation
Not in a motif group
homologous
HL_5J7L_143
HL_75407.1
HL_4WF1_0431/BA/327:335No text annotation
Not in a motif group
homologous
HL_5J7L_144
HL_08002.8
HL_4WF1_0441/BA/382:392No text annotation
Not in a motif group
homologous
HL_5J7L_145
HL_91503.4
HL_4WF1_0451/BA/410:417No text annotation
Not in a motif group
homologous
HL_5J7L_146
HL_96598.1
HL_4WF1_0461/BA/462:467No text annotation
Not in a motif group
homologous
HL_7RQB_015
HL_42097.1
HL_4WF1_0471/BA/487:493No text annotation
Not in a motif group
homologous
HL_5J7L_148
HL_42097.1
HL_4WF1_0481/BA/543:550No text annotation
Not in a motif group
homologous
HL_5J7L_149
HL_79531.1
HL_4WF1_0491/BA/566:575T-loop with 2 stacked bulged bases
Not in a motif group
homologous
HL_5J7L_150
HL_89380.2
HL_4WF1_0501/BA/611:617No text annotation
Not in a motif group
homologous
HL_5J7L_151
HL_90617.2
HL_4WF1_0511/BA/629:634GNRA
Not in a motif group
homologous
HL_5J7L_152
HL_42097.1
HL_4WF1_0521/BA/641:647No text annotation
Not in a motif group
homologous
HL_5J7L_153
HL_77805.2
HL_4WF1_0531/BA/712:719No text annotation
Not in a motif group
homologous
HL_5J7L_154
HL_84085.2
HL_4WF1_0541/BA/744:753No text annotation
Not in a motif group
homologous
HL_4WF9_023
HL_39334.6
HL_4WF1_0551/BA/779:785No text annotation
Not in a motif group
homologous
HL_7A0S_023
HL_27930.1
HL_4WF1_0561/BA/826:831No text annotation
Not in a motif group
homologous
HL_5J7L_157
HL_64365.1
HL_4WF1_0581/BA/955:962GNRA
Not in a motif group
homologous
HL_4WF9_027
HL_42097.1
HL_4WF1_0591/BA/978:985No text annotation
Not in a motif group
homologous
HL_4WF9_028
HL_64430.2
HL_4WF1_0601/BA/1064:1074No text annotation
Not in a motif group
HL_4WF1_0611/BA/1091:1100No text annotation
Not in a motif group
HL_4WF1_0621/BA/1168:1181No text annotation
Not in a motif group
HL_4WF1_0631/BA/1222:1227Other HL
Not in a motif group
homologous
HL_5J7L_164
HL_87030.2
HL_4WF1_0641/BA/1281:1289T-loop with 2 stacked bulged bases
Not in a motif group
homologous
HL_5J7L_165
HL_89380.2
HL_4WF1_0651/BA/1324:1330No text annotation
Not in a motif group
homologous
HL_5J7L_166
HL_46680.1
HL_4WF1_0661/BA/1363:1368Other HL
Not in a motif group
homologous
HL_5J7L_167
HL_87030.2
HL_4WF1_0671/BA/1389:1398No text annotation
Not in a motif group
homologous
HL_5J7L_168
HL_69023.2
HL_4WF1_0681/BA/1451:1459No text annotation
Not in a motif group
homologous
HL_5J7L_169
HL_53837.1
HL_4WF1_0691/BA/1492:1498No text annotation
Not in a motif group
homologous
HL_5J7L_170
HL_46680.1
HL_4WF1_0701/BA/1533:1538UNCG
Not in a motif group
homologous
HL_5J7L_171
HL_03562.2
HL_4WF1_0711/BA/1565:1568No text annotation
Not in a motif group
homologous
HL_7RQB_039
HL_38927.2
HL_4WF1_0721/BA/1612:1619No text annotation
Not in a motif group
homologous
HL_7RQB_040
HL_64430.2
HL_4WF1_0731/BA/1630:1636GNRA with one bulged base
Not in a motif group
homologous
HL_5J7L_174
HL_42097.1
HL_4WF1_0741/BA/1691:1696UNCG
Not in a motif group
geometric
HL_5J7L_175
HL_03562.2
HL_4WF1_0751/BA/1728:1731No text annotation
Not in a motif group
geometric
HL_5J7L_176
HL_98426.1
HL_4WF1_0761/BA/1752:1756No text annotation
Not in a motif group
homologous
HL_5J7L_177
HL_76539.2
HL_4WF1_0771/BA/1777:1787No text annotation
Not in a motif group
homologous
HL_5J7L_178
HL_43613.5
HL_4WF1_0781/BA/1806:1811No text annotation
Not in a motif group
homologous
HL_5J7L_179
HL_42097.1
HL_4WF1_0791/BA/1868:1873Other HL
Not in a motif group
homologous
HL_5J7L_180
HL_42097.1
HL_4WF1_0801/BA/1949:1957No text annotation
Not in a motif group
homologous
HL_5J7L_182
HL_51824.1
HL_4WF1_0811/BA/2027:2036No text annotation
Not in a motif group
homologous
HL_4WF9_047
HL_90642.6
HL_4WF1_0831/BA/2209:2215No text annotation
Not in a motif group
homologous
HL_5J7L_185
HL_16845.6
HL_4WF1_0841/BA/2248:2256No text annotation
Not in a motif group
homologous
HL_5J7L_186
NA
HL_4WF1_0851/BA/2264:2276No text annotation
Not in a motif group
homologous
HL_5J7L_187
HL_19870.6
HL_4WF1_0861/BA/2303:2313No text annotation
Not in a motif group
homologous
HL_7RQB_055
HL_11805.3
HL_4WF1_0871/BA/2324:2331No text annotation
Not in a motif group
homologous
HL_5J7L_189
HL_12078.2
HL_4WF1_0881/BA/2356:2361Other HL
Not in a motif group
homologous
HL_5J7L_190
HL_87030.2
HL_4WF1_0891/BA/2374:2379GNRA
Not in a motif group
homologous
HL_5J7L_191
HL_42097.1
HL_4WF1_0901/BA/2404:2413No text annotation
Not in a motif group
homologous
HL_5J7L_192
HL_30784.2
HL_4WF1_0911/BA/2471:2479No text annotation
Not in a motif group
homologous
HL_5J7L_193
HL_06192.2
HL_4WF1_0921/BA/2528:2535No text annotation
Not in a motif group
homologous
HL_5J7L_194
HL_88526.2
HL_4WF1_0931/BA/2551:2557No text annotation
Not in a motif group
homologous
HL_4WF9_058
HL_43656.2
HL_4WF1_0941/BA/2594:2599GNRA
Not in a motif group
homologous
HL_5J7L_196
HL_42097.1
HL_4WF1_0951/BA/2658:2663GNRA
Not in a motif group
homologous
HL_5J7L_197
HL_42097.1
HL_4WF1_0961/BA/2701:2706Ribsomal LSU H95
Not in a motif group
homologous
HL_5J7L_198
HL_46680.1
HL_4WF1_0971/BA/2745:2759No text annotation
Not in a motif group
homologous
HL_5J7L_199
HL_56677.7
HL_4WF1_0981/BA/2796:2799No text annotation
Not in a motif group
geometric
HL_6U8D_003
HL_89098.1
HL_4WF1_0991/BA/2819:2827No text annotation
Not in a motif group
homologous
HL_5J7L_201
HL_27930.1
HL_4WF1_1001/BA/2856:2861Other HL
Not in a motif group
homologous
HL_5J7L_202
HL_42097.1
HL_4WF1_1011/BB/38:44No text annotation
Not in a motif group
homologous
HL_5J7L_203
HL_87939.1
HL_4WF1_1021/BB/86:90No text annotation
Not in a motif group
homologous
HL_5J7L_204
HL_38927.2
HL_4WF1_1031/CA/12:22No text annotation
Not in a motif group
homologous
HL_5J7L_001
HL_89881.2
HL_4WF1_1051/CA/158:163GNRA
Not in a motif group
homologous
HL_5J7L_003
HL_42097.1
HL_4WF1_1061/CA/186:191GNRA
Not in a motif group
homologous
HL_5J7L_004
HL_42097.1
HL_4WF1_1071/CA/207:212UNCG
Not in a motif group
homologous
HL_5J7L_005
HL_03562.2
HL_4WF1_1081/CA/259:267No text annotation
Not in a motif group
homologous
HL_5J7L_006
HL_69023.2
HL_4WF1_1091/CA/296:301GNRA
Not in a motif group
homologous
HL_5J7L_007
HL_42097.1
HL_4WF1_1101/CA/320:333No text annotation
Not in a motif group
homologous
HL_5J7L_008
HL_81205.2
HL_4WF1_1111/CA/342:347UNCG
Not in a motif group
homologous
HL_4LFB_009
HL_03562.2
HL_4WF1_1121/CA/379:384GNRA
Not in a motif group
homologous
HL_4LFB_010
HL_42097.1
HL_4WF1_1131/CA/419:424UNCG
Not in a motif group
homologous
HL_5J7L_011
HL_03562.2
HL_4WF1_1141/CA/462:470No text annotation
Not in a motif group
homologous
HL_5J7L_012
HL_84085.2
HL_4WF1_1151/CA/522:527No text annotation
Not in a motif group
geometric
HL_4WF9_003
HL_75407.1
HL_4WF1_1161/CA/617:623No text annotation
Not in a motif group
homologous
HL_5J7L_014
HL_26881.1
HL_4WF1_1171/CA/689:698No text annotation
Not in a motif group
homologous
HL_5J7L_015
HL_12326.1
HL_4WF1_1181/CA/726:731Other HL
Not in a motif group
homologous
HL_5J7L_016
HL_87030.2
HL_4WF1_1191/CA/786:796No text annotation
Not in a motif group
homologous
HL_5J7L_017
HL_12326.1
HL_4WF1_1201/CA/840:846No text annotation
Not in a motif group
HL_4WF1_1211/CA/862:867GNRA
Not in a motif group
homologous
HL_4LFB_019
HL_42097.1
HL_4WF1_1221/CA/897:902GNRA
Not in a motif group
homologous
HL_5J7L_020
HL_42097.1
HL_4WF1_1231/CA/963:972No text annotation
Not in a motif group
homologous
HL_5J7L_021
NA
HL_4WF1_1241/CA/1012:1017Other HL
Not in a motif group
geometric
HL_4Y1M_004
HL_42097.1
HL_4WF1_1261/CA/1076:1081GNRA
Not in a motif group
homologous
HL_5J7L_023
HL_42097.1
HL_4WF1_1271/CA/1089:1096No text annotation
Not in a motif group
homologous
HL_5J7L_024
HL_71554.2
HL_4WF1_1281/CA/1134:1140No text annotation
Not in a motif group
homologous
HL_5J7L_025
HL_03562.2
HL_4WF1_1291/CA/1165:1171No text annotation
Not in a motif group
homologous
HL_5J7L_026
HL_90617.2
HL_4WF1_1301/CA/1265:1270No text annotation
Not in a motif group
homologous
HL_6CZR_099
NA
HL_4WF1_1311/CA/1314:1323No text annotation
Not in a motif group
homologous
HL_5J7L_028
HL_89380.2
HL_4WF1_1321/CA/1355:1367No text annotation
Not in a motif group
HL_4WF1_1331/CA/1449:1454UNCG
Not in a motif group
homologous
HL_5J7L_030
HL_03562.2
HL_4WF1_1341/CA/1515:1520No text annotation
Not in a motif group
homologous
HL_4LFB_032
NA
HL_4WF1_1351/DA/59:68No text annotation
Not in a motif group
homologous
HL_5J7L_134
HL_18177.1
HL_4WF1_1361/DA/87:95No text annotation
Not in a motif group
homologous
HL_5J7L_135
HL_84193.1
HL_4WF1_1371/DA/123:128No text annotation
Not in a motif group
homologous
HL_4WF9_003
HL_75407.1
HL_4WF1_1381/DA/137:142No text annotation
Not in a motif group
HL_4WF1_1391/DA/158:168No text annotation
Not in a motif group
homologous
HL_5J7L_138
HL_81820.1
HL_4WF1_1401/DA/194:201No text annotation
Not in a motif group
geometric
HL_5J7L_139
HL_06192.2
HL_4WF1_1411/DA/225:230No text annotation
Not in a motif group
homologous
HL_5J7L_140
HL_27930.1
HL_4WF1_1421/DA/246:252No text annotation
Not in a motif group
homologous
HL_5J7L_141
HL_67216.7
HL_4WF1_1431/DA/305:312T-loop with 1 bulged base
Not in a motif group
homologous
HL_5J7L_142
HL_89380.2
HL_4WF1_1441/DA/319:323No text annotation
Not in a motif group
homologous
HL_5J7L_143
HL_75407.1
HL_4WF1_1451/DA/327:335No text annotation
Not in a motif group
homologous
HL_5J7L_144
HL_08002.8
HL_4WF1_1461/DA/382:392No text annotation
Not in a motif group
homologous
HL_5J7L_145
HL_91503.4
HL_4WF1_1471/DA/410:417No text annotation
Not in a motif group
homologous
HL_5J7L_146
HL_96598.1
HL_4WF1_1481/DA/462:467No text annotation
Not in a motif group
homologous
HL_7RQB_015
HL_42097.1
HL_4WF1_1491/DA/487:493No text annotation
Not in a motif group
homologous
HL_5J7L_148
HL_42097.1
HL_4WF1_1501/DA/543:550No text annotation
Not in a motif group
homologous
HL_5J7L_149
HL_79531.1
HL_4WF1_1511/DA/566:575T-loop with 2 stacked bulged bases
Not in a motif group
homologous
HL_5J7L_150
HL_89380.2
HL_4WF1_1521/DA/611:617No text annotation
Not in a motif group
homologous
HL_5J7L_151
HL_90617.2
HL_4WF1_1531/DA/629:634GNRA
Not in a motif group
homologous
HL_5J7L_152
HL_42097.1
HL_4WF1_1541/DA/640:648No text annotation
Not in a motif group
geometric
HL_1U9S_003
HL_07145.1
HL_4WF1_1551/DA/712:719No text annotation
Not in a motif group
homologous
HL_5J7L_154
HL_84085.2
HL_4WF1_1561/DA/744:753No text annotation
Not in a motif group
homologous
HL_4WF9_023
HL_39334.6
HL_4WF1_1571/DA/779:785No text annotation
Not in a motif group
geometric
HL_6JQ6_004
HL_03562.2
HL_4WF1_1581/DA/826:831No text annotation
Not in a motif group
homologous
HL_7RQB_025
HL_64365.1
HL_4WF1_1601/DA/955:962GNRA
Not in a motif group
homologous
HL_4WF9_027
HL_42097.1
HL_4WF1_1611/DA/978:985No text annotation
Not in a motif group
homologous
HL_4WF9_028
HL_64430.2
HL_4WF1_1621/DA/1059:1079No text annotation
Not in a motif group
HL_4WF1_1631/DA/1092:1099No text annotation
Not in a motif group
homologous
HL_6PRV_002
HL_84085.2
HL_4WF1_1641/DA/1168:1181No text annotation
Not in a motif group
HL_4WF1_1651/DA/1222:1227Other HL
Not in a motif group
homologous
HL_5J7L_164
HL_87030.2
HL_4WF1_1661/DA/1281:1289T-loop with 2 stacked bulged bases
Not in a motif group
homologous
HL_5J7L_165
HL_89380.2
HL_4WF1_1671/DA/1324:1330No text annotation
Not in a motif group
homologous
HL_5J7L_166
HL_46680.1
HL_4WF1_1681/DA/1363:1368Other HL
Not in a motif group
homologous
HL_5J7L_167
HL_87030.2
HL_4WF1_1691/DA/1389:1398No text annotation
Not in a motif group
homologous
HL_5J7L_168
HL_69023.2
HL_4WF1_1701/DA/1451:1459No text annotation
Not in a motif group
homologous
HL_5J7L_169
HL_53837.1
HL_4WF1_1711/DA/1492:1498No text annotation
Not in a motif group
homologous
HL_5J7L_170
HL_46680.1
HL_4WF1_1731/DA/1565:1568No text annotation
Not in a motif group
homologous
HL_5J7L_172
HL_38927.2
HL_4WF1_1741/DA/1612:1619No text annotation
Not in a motif group
homologous
HL_7RQB_040
HL_64430.2
HL_4WF1_1751/DA/1629:1637No text annotation
Not in a motif group
homologous
HL_4WF9_039
HL_92229.2
HL_4WF1_1761/DA/1691:1696UNCG
Not in a motif group
homologous
HL_5J7L_175
HL_03562.2
HL_4WF1_1771/DA/1728:1731No text annotation
Not in a motif group
homologous
HL_5J7L_176
HL_98426.1
HL_4WF1_1781/DA/1752:1756No text annotation
Not in a motif group
homologous
HL_5J7L_177
HL_76539.2
HL_4WF1_1791/DA/1777:1787No text annotation
Not in a motif group
homologous
HL_4WF9_043
HL_43613.5
HL_4WF1_1801/DA/1806:1811No text annotation
Not in a motif group
homologous
HL_5J7L_179
HL_42097.1
HL_4WF1_1811/DA/1868:1873Other HL
Not in a motif group
homologous
HL_5J7L_180
HL_42097.1
HL_4WF1_1821/DA/1910:1920No text annotation
Not in a motif group
geometric
HL_5TBW_049
HL_71924.2
HL_4WF1_1831/DA/1949:1957No text annotation
Not in a motif group
homologous
HL_5J7L_182
HL_51824.1
HL_4WF1_1841/DA/2027:2036No text annotation
Not in a motif group
homologous
HL_7RQB_050
HL_90642.6
HL_4WF1_1851/DA/2143:2148UNCG
Not in a motif group
homologous
HL_3U4M_001
HL_03562.2
HL_4WF1_1861/DA/2209:2215No text annotation
Not in a motif group
homologous
HL_5J7L_185
HL_16845.6
HL_4WF1_1871/DA/2248:2256No text annotation
Not in a motif group
homologous
HL_5J7L_186
NA
HL_4WF1_1881/DA/2264:2276No text annotation
Not in a motif group
homologous
HL_7RQB_054
HL_19870.6
HL_4WF1_1891/DA/2303:2313No text annotation
Not in a motif group
homologous
HL_7RQB_055
HL_11805.3
HL_4WF1_1901/DA/2324:2331No text annotation
Not in a motif group
homologous
HL_5J7L_189
HL_12078.2
HL_4WF1_1911/DA/2355:2362No text annotation
Not in a motif group
homologous
HL_7A0S_056
HL_84085.2
HL_4WF1_1921/DA/2374:2379GNRA
Not in a motif group
homologous
HL_5J7L_191
HL_42097.1
HL_4WF1_1931/DA/2404:2413No text annotation
Not in a motif group
homologous
HL_5J7L_192
HL_30784.2
HL_4WF1_1941/DA/2471:2479No text annotation
Not in a motif group
homologous
HL_5J7L_193
HL_06192.2
HL_4WF1_1951/DA/2528:2535No text annotation
Not in a motif group
homologous
HL_5J7L_194
HL_88526.2
HL_4WF1_1961/DA/2551:2557No text annotation
Not in a motif group
homologous
HL_4WF9_058
HL_43656.2
HL_4WF1_1971/DA/2594:2599No text annotation
Not in a motif group
homologous
HL_7RQB_063
HL_42097.1
HL_4WF1_1981/DA/2658:2663GNRA
Not in a motif group
homologous
HL_5J7L_197
HL_42097.1
HL_4WF1_1991/DA/2701:2706Ribsomal LSU H95
Not in a motif group
homologous
HL_5J7L_198
HL_46680.1
HL_4WF1_2001/DA/2745:2759No text annotation
Not in a motif group
homologous
HL_5J7L_199
HL_56677.7
HL_4WF1_2021/DA/2819:2827No text annotation
Not in a motif group
homologous
HL_5J7L_201
HL_27930.1
HL_4WF1_2031/DA/2856:2861No text annotation
Not in a motif group
homologous
HL_7A0S_068
HL_42097.1
HL_4WF1_2041/DB/38:44No text annotation
Not in a motif group
homologous
HL_7RQB_070
HL_87939.1
HL_4WF1_2051/DB/86:90No text annotation
Not in a motif group
homologous
HL_5J7L_204
HL_38927.2

Problematic loops

#loop idProblemSequence
HL_4WF1_023No text annotation
HL_4WF1_057No text annotation
HL_4WF1_082No text annotation
HL_4WF1_104No text annotation
HL_4WF1_125No text annotation
HL_4WF1_159No text annotation
HL_4WF1_172UNCG
HL_4WF1_201No text annotation

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
IL_4WF1_0011/AA/30:32,
1/AA/552:553
Single bulged G
Not in a motif group
homologous
IL_5J7L_001
IL_00225.2
IL_4WF1_0021/AA/44:45,
1/AA/396:398
Single bulged A
Not in a motif group
homologous
IL_5J7L_002
IL_37497.2
IL_4WF1_0031/AA/47:52,
1/AA/359:361
No text annotation
Not in a motif group
homologous
IL_5J7L_003
IL_11178.1
IL_4WF1_0041/AA/54:56,
1/AA/356:357
Minor groove platform
Not in a motif group
homologous
IL_4LFB_004
IL_93353.1
IL_4WF1_0051/AA/63:66,
1/AA/103:104
Multiple bulged bases
Not in a motif group
homologous
IL_5J7L_005
IL_76389.1
IL_4WF1_0061/AA/67:69,
1/AA/99:102
Minor groove platform with extra cWW
Not in a motif group
homologous
IL_5J7L_006
IL_65006.1
IL_4WF1_0071/AA/70:73,
1/AA/97:98
Minor groove platform
Not in a motif group
homologous
IL_5J7L_007
IL_15052.1
IL_4WF1_0081/AA/75:76,
1/AA/93:95
No text annotation
Not in a motif group
IL_4WF1_0091/AA/128:131,
1/AA/231:233
Isolated non-canonical cWW with bulges
Not in a motif group
homologous
IL_5J7L_009
IL_82068.2
IL_4WF1_0101/AA/132:136,
1/AA/227:230
Minor groove platform related
Not in a motif group
homologous
IL_5J7L_010
IL_58764.3
IL_4WF1_0111/AA/144:146,
1/AA/176:178
Isolated cWH basepair
Not in a motif group
homologous
IL_5J7L_011
IL_51629.2
IL_4WF1_0121/AA/147:153,
1/AA/168:175
tWH-tWH-tHW-tHW
Not in a motif group
homologous
IL_5J7L_012
IL_80604.2
IL_4WF1_0131/AA/203:206,
1/AA/213:214
Minor groove platform
Not in a motif group
geometric
IL_3RW6_003
IL_93353.1
IL_4WF1_0141/AA/242:247,
1/AA/277:284
Kink-turn with non-sequential stacking
Not in a motif group
homologous
IL_5J7L_014
IL_45067.2
IL_4WF1_0151/AA/249:252,
1/AA/274:275
No text annotation
Not in a motif group
homologous
IL_5J7L_015
IL_48100.2
IL_4WF1_0161/AA/292:293,
1/AA/304:308
C-loop
Not in a motif group
homologous
IL_6CZR_125
IL_37712.2
IL_4WF1_0171/AA/367:369,
1/AA/392:393
Single bulged U
Not in a motif group
homologous
IL_5J7L_017
IL_83039.13
IL_4WF1_0181/AA/371:375,
1/AA/389:390
C-loop
Not in a motif group
homologous
IL_5J7L_018
IL_75255.1
IL_4WF1_0191/AA/375:376,
1/AA/387:389
Single bulged G
Not in a motif group
geometric
IL_5J7L_019
IL_00225.2
IL_4WF1_0201/AA/409:416,
1/AA/427:433
No text annotation
Not in a motif group
homologous
IL_4LFB_017
IL_28026.1
IL_4WF1_0211/AA/440:442,
1/AA/492:497
No text annotation
Not in a motif group
homologous
IL_5J7L_021
IL_22248.1
IL_4WF1_0221/AA/446:450,
1/AA/483:488
tSH-tHW-tWW
Not in a motif group
geometric
IL_5J7L_022
IL_88269.3
IL_4WF1_0231/AA/450:455,
1/AA/477:483
No text annotation
Not in a motif group
homologous
IL_5J7L_023
IL_70801.1
IL_4WF1_0241/AA/504:511,
1/AA/540:541
SSU/LSU pseudoknot
Not in a motif group
homologous
IL_5J7L_024
IL_15861.7
IL_4WF1_0251/AA/515:521,
1/AA/528:536
No text annotation
Not in a motif group
geometric
IL_4V88_415
IL_55871.1
IL_4WF1_0261/AA/569:575,
1/AA/880:881
No text annotation
Not in a motif group
homologous
IL_5J7L_026
IL_69996.1
IL_4WF1_0271/AA/580:584,
1/AA/757:761
tSH-tHW-tHS
Not in a motif group
homologous
IL_5J7L_027
IL_17136.1
IL_4WF1_0281/AA/594:596,
1/AA/644:645
Major groove platform
Not in a motif group
homologous
IL_5J7L_028
IL_27635.1
IL_4WF1_0291/AA/597:598,
1/AA/640:643
Major groove minor groove platform; mini C-loop
Not in a motif group
homologous
IL_5J7L_029
IL_09061.6
IL_4WF1_0311/AA/605:612,
1/AA/628:633
No text annotation
Not in a motif group
homologous
IL_5J7L_030
IL_78349.1
IL_4WF1_0321/AA/654:655,
1/AA/751:754
Major groove platform; stack outside cWW
Not in a motif group
homologous
IL_5J7L_031
IL_50694.2
IL_4WF1_0331/AA/658:659,
1/AA/746:748
Single stack bend
Not in a motif group
homologous
IL_5J7L_032
IL_76488.2
IL_4WF1_0341/AA/662:666,
1/AA/740:743
Tandem non-canonical cWW pairs
Not in a motif group
homologous
IL_5J7L_033
IL_71110.1
IL_4WF1_0351/AA/684:688,
1/AA/699:706
Kink-turn
Not in a motif group
homologous
IL_5J7L_035
IL_45067.2
IL_4WF1_0361/AA/774:778,
1/AA/804:805
Left turn
Not in a motif group
homologous
IL_5J7L_036
IL_29346.1
IL_4WF1_0371/AA/779:783,
1/AA/799:803
tSH-tHW-tHS
Not in a motif group
homologous
IL_5J7L_037
IL_17136.1
IL_4WF1_0381/AA/887:894,
1/AA/905:910
8x6 Sarcin-Ricin with inserted Y; G-bulge
Not in a motif group
homologous
IL_5J7L_038
IL_24606.2
IL_4WF1_0391/AA/922:923,
1/AA/1393:1395
Single bulged A
Not in a motif group
homologous
IL_5J7L_039
IL_37497.2
IL_4WF1_0401/AA/925:927,
1/AA/1390:1391
Single bulged G
Not in a motif group
homologous
IL_4LFB_036
IL_00225.2
IL_4WF1_0411/AA/933:935,
1/AA/1380:1384
Minor groove platform
Not in a motif group
homologous
IL_5J7L_041
IL_47078.1
IL_4WF1_0421/AA/952:954,
1/AA/1226:1229
Minor groove platform with extra cWW
Not in a motif group
geometric
IL_4WF9_003
IL_65006.1
IL_4WF1_0471/AA/1047:1050,
1/AA/1208:1210
No text annotation
Not in a motif group
geometric
IL_7A0S_031
IL_95997.1
IL_4WF1_0481/AA/1051:1056,
1/AA/1204:1207
Tandem non-canonical cWW pairs
Not in a motif group
geometric
IL_4V88_473
IL_30621.2
IL_4WF1_0491/AA/1057:1058,
1/AA/1199:1203
Minor groove platform
Not in a motif group
homologous
IL_5J7L_048
IL_93353.1
IL_4WF1_0501/AA/1060:1061,
1/AA/1195:1197
Single bulged A
Not in a motif group
homologous
IL_5J7L_049
IL_37497.2
IL_4WF1_0511/AA/1061:1063,
1/AA/1193:1195
No text annotation
Not in a motif group
geometric
IL_5J7L_050
IL_95997.1
IL_4WF1_0521/AA/1124:1129,
1/AA/1143:1149
No text annotation
Not in a motif group
IL_4WF1_0531/AA/1129:1132,
1/AA/1142:1143
Minor groove platform
Not in a motif group
geometric
IL_5J7L_052
IL_15052.1
IL_4WF1_0541/AA/1158:1161,
1/AA/1175:1181
No text annotation
Not in a motif group
homologous
IL_5J7L_053
IL_42032.1
IL_4WF1_0551/AA/1246:1253,
1/AA/1284:1291
No text annotation
Not in a motif group
IL_4WF1_0561/AA/1255:1258,
1/AA/1277:1282
No text annotation
Not in a motif group
homologous
IL_5J7L_055
IL_75461.4
IL_4WF1_0571/AA/1259:1263,
1/AA/1272:1276
Triple sheared
Not in a motif group
homologous
IL_5J7L_056
IL_56467.8
IL_4WF1_0581/AA/1303:1308,
1/AA/1329:1334
No text annotation
Not in a motif group
homologous
IL_5J7L_057
IL_19954.2
IL_4WF1_0591/AA/1399:1401,
1/AA/1501:1504
No text annotation
Not in a motif group
homologous
IL_5J7L_058
IL_36143.3
IL_4WF1_0601/AA/1401:1404,
1/AA/1497:1501
No text annotation
Not in a motif group
geometric
IL_4V88_464
IL_99670.1
IL_4WF1_0611/AA/1405:1407,
1/AA/1494:1496
No text annotation
Not in a motif group
geometric
IL_4V88_465
IL_95997.1
IL_4WF1_0621/AA/1407:1409,
1/AA/1491:1494
Isolated non-canonical cWW with bulges
Not in a motif group
geometric
IL_1U6B_001
IL_82068.2
IL_4WF1_0631/AA/1412:1414,
1/AA/1486:1488
No text annotation
Not in a motif group
homologous
IL_5J7L_061
IL_95997.1
IL_4WF1_0641/AA/1416:1419,
1/AA/1481:1484
Double sheared
Not in a motif group
homologous
IL_5J7L_062
IL_09705.9
IL_4WF1_0651/AA/1430:1435,
1/AA/1466:1470
Triple sheared related
Not in a motif group
homologous
IL_5J7L_063
IL_64879.2
IL_4WF1_0661/AA/1440:1442,
1/AA/1460:1461
Minor groove platform
Not in a motif group
homologous
IL_5J7L_064
IL_42622.2
IL_4WF1_0671/AA/1445:1448,
1/AA/1455:1457
No text annotation
Not in a motif group
homologous
IL_5J7L_065
IL_02284.5
IL_4WF1_0681/BA/24:30,
1/BA/510:516
Triple sheared with non-canonical cWW
Not in a motif group
homologous
IL_5J7L_245
IL_66414.6
IL_4WF1_0691/BA/36:37,
1/BA/442:444
Single bulged A
Not in a motif group
homologous
IL_5J7L_246
IL_37497.2
IL_4WF1_0701/BA/43:44,
1/BA/434:436
Minor groove platform
Not in a motif group
homologous
IL_5J7L_247
IL_42622.2
IL_4WF1_0711/BA/81:85,
1/BA/97:105
No text annotation
Not in a motif group
homologous
IL_5J7L_248
IL_93699.1
IL_4WF1_0721/BA/183:184,
1/BA/212:214
Single stack bend
Not in a motif group
homologous
IL_5J7L_249
IL_76488.2
IL_4WF1_0731/BA/188:194,
1/BA/201:208
8x7 Sarcin-Ricin; G-bulge
Not in a motif group
geometric
IL_5J7L_250
IL_04346.7
IL_4WF1_0741/BA/239:245,
1/BA/253:258
7x6 Sarcin-Ricin; G-bulge
Not in a motif group
homologous
IL_5J7L_251
IL_76042.2
IL_4WF1_0751/BA/269:271,
1/BA/366:370
No text annotation
Not in a motif group
homologous
IL_5J7L_252
IL_47972.1
IL_4WF1_0761/BA/274:281,
1/BA/359:363
No text annotation
Not in a motif group
homologous
IL_5J7L_253
IL_77870.1
IL_4WF1_0781/BA/293:295,
1/BA/343:347
No text annotation
Not in a motif group
homologous
IL_5J7L_254
IL_69440.1
IL_4WF1_0791/BA/481:484,
1/BA/496:509
No text annotation
Not in a motif group
homologous
IL_5J7L_255
IL_60992.6
IL_4WF1_0801/BA/536:539,
1/BA/554:557
Double sheared
Not in a motif group
homologous
IL_5J7L_256
IL_09705.9
IL_4WF1_0811/BA/564:566,
1/BA/575:577
No text annotation
Not in a motif group
geometric
IL_5J7L_257
IL_95997.1
IL_4WF1_0821/BA/606:610,
1/BA/618:622
AAA cross-strand stack
Not in a motif group
homologous
IL_5J7L_258
IL_17136.1
IL_4WF1_0831/BA/672:674,
1/BA/806:808
No text annotation
Not in a motif group
homologous
IL_5J7L_259
IL_95997.1
IL_4WF1_0841/BA/674:678,
1/BA/799:806
tHW-tHW cross-strand stack
Not in a motif group
geometric
IL_5J7L_260
IL_17470.6
IL_4WF1_0851/BA/697:698,
1/BA/763:765
Single bulged A
Not in a motif group
geometric
IL_5J7L_261
IL_37497.2
IL_4WF1_0861/BA/702:703,
1/BA/728:730
Single bulged G
Not in a motif group
geometric
IL_5J7L_262
IL_00225.2
IL_4WF1_0871/BA/703:707,
1/BA/724:728
Triple sheared
Not in a motif group
homologous
IL_5J7L_263
IL_56467.8
IL_4WF1_0881/BA/738:740,
1/BA/757:758
Major groove platform
Not in a motif group
homologous
IL_5J7L_264
IL_27635.1
IL_4WF1_0891/BA/775:777,
1/BA/787:791
Multiple bulged bases
Not in a motif group
homologous
IL_5J7L_265
IL_90991.6
IL_4WF1_0901/BA/844:847,
1/BA/933:934
Other IL
Not in a motif group
homologous
IL_5J7L_267
IL_92001.1