Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
HL_5V8I_0011/1A/59:68No text annotation
Not in a motif group
homologous
HL_7RQB_001
HL_99167.1
HL_5V8I_0021/1A/87:95No text annotation
Not in a motif group
homologous
HL_7RQB_002
HL_96598.1
HL_5V8I_0031/1A/123:128No text annotation
Not in a motif group
homologous
HL_7RQB_003
HL_75407.1
HL_5V8I_0041/1A/139:142ANo text annotation
Not in a motif group
homologous
HL_7RQB_004
HL_79921.2
HL_5V8I_0051/1A/194:201No text annotation
Not in a motif group
geometric
HL_7RQB_006
HL_06192.2
HL_5V8I_0061/1A/225:230No text annotation
Not in a motif group
homologous
HL_7RQB_007
HL_02862.2
HL_5V8I_0071/1A/246:252No text annotation
Not in a motif group
homologous
HL_7RQB_008
HL_67216.7
HL_5V8I_0081/1A/271I:271ONo text annotation
Not in a motif group
geometric
HL_5J7L_018
HL_34168.2
HL_5V8I_0091/1A/305:312No text annotation
Not in a motif group
homologous
HL_7RQB_010
HL_89380.2
HL_5V8I_0101/1A/319:323No text annotation
Not in a motif group
homologous
HL_7RQB_011
HL_75407.1
HL_5V8I_0111/1A/327:335No text annotation
Not in a motif group
homologous
HL_7RQB_012
HL_08002.8
HL_5V8I_0121/1A/382:392No text annotation
Not in a motif group
homologous
HL_7RQB_013
HL_91503.4
HL_5V8I_0131/1A/410:417No text annotation
Not in a motif group
homologous
HL_7RQB_014
HL_96598.1
HL_5V8I_0141/1A/462:467No text annotation
Not in a motif group
homologous
HL_7RQB_015
HL_42097.1
HL_5V8I_0151/1A/487:493No text annotation
Not in a motif group
homologous
HL_7RQB_016
HL_42097.1
HL_5V8I_0171/1A/566:575No text annotation
Not in a motif group
homologous
HL_7RQB_018
HL_89380.2
HL_5V8I_0181/1A/612:615No text annotation
Not in a motif group
homologous
HL_7RQB_019
HL_32369.1
HL_5V8I_0191/1A/629:634No text annotation
Not in a motif group
homologous
HL_7RQB_020
HL_42097.1
HL_5V8I_0201/1A/641:647No text annotation
Not in a motif group
homologous
HL_7RQB_021
HL_42097.1
HL_5V8I_0211/1A/712:719No text annotation
Not in a motif group
homologous
HL_7RQB_022
HL_84085.2
HL_5V8I_0221/1A/744:753No text annotation
Not in a motif group
homologous
HL_7RQB_023
HL_39334.6
HL_5V8I_0231/1A/779:785No text annotation
Not in a motif group
homologous
HL_7RQB_024
HL_74322.1
HL_5V8I_0241/1A/826:831No text annotation
Not in a motif group
homologous
HL_4WF9_025
HL_64365.1
HL_5V8I_0251/1A/884:892No text annotation
Not in a motif group
homologous
HL_7RQB_026
HL_27930.1
HL_5V8I_0261/1A/955:962No text annotation
Not in a motif group
homologous
HL_7RQB_027
HL_42097.1
HL_5V8I_0271/1A/978:985No text annotation
Not in a motif group
homologous
HL_7RQB_028
HL_64430.2
HL_5V8I_0281/1A/1059:1079No text annotation
Not in a motif group
HL_5V8I_0291/1A/1092:1099No text annotation
Not in a motif group
homologous
HL_6PRV_002
HL_84085.2
HL_5V8I_0301/1A/1171:1178No text annotation
Not in a motif group
homologous
HL_7RQB_031
HL_94651.3
HL_5V8I_0311/1A/1222:1227No text annotation
Not in a motif group
homologous
HL_7RQB_032
HL_42097.1
HL_5V8I_0321/1A/1281:1289No text annotation
Not in a motif group
homologous
HL_7RQB_033
HL_89380.2
HL_5V8I_0331/1A/1324:1330No text annotation
Not in a motif group
homologous
HL_7RQB_034
HL_46680.1
HL_5V8I_0341/1A/1363:1368No text annotation
Not in a motif group
homologous
HL_7RQB_035
HL_87030.2
HL_5V8I_0351/1A/1389:1398No text annotation
Not in a motif group
homologous
HL_7RQB_036
HL_69023.2
HL_5V8I_0361/1A/1451:1459No text annotation
Not in a motif group
homologous
HL_7RQB_037
HL_32426.1
HL_5V8I_0371/1A/1492:1498No text annotation
Not in a motif group
homologous
HL_7RQB_038
HL_46680.1
HL_5V8I_0381/1A/1565:1568No text annotation
Not in a motif group
homologous
HL_7A0S_039
HL_38927.2
HL_5V8I_0391/1A/1612:1619No text annotation
Not in a motif group
homologous
HL_7RQB_040
HL_64430.2
HL_5V8I_0401/1A/1631:1635No text annotation
Not in a motif group
homologous
HL_7RQB_041
HL_01057.1
HL_5V8I_0411/1A/1691:1696No text annotation
Not in a motif group
homologous
HL_7RQB_042
HL_03562.2
HL_5V8I_0421/1A/1720:1742No text annotation
Not in a motif group
homologous
HL_7RQB_043
HL_43656.2
HL_5V8I_0431/1A/1752:1756No text annotation
Not in a motif group
homologous
HL_7RQB_044
HL_76539.2
HL_5V8I_0441/1A/1777:1787No text annotation
Not in a motif group
homologous
HL_5J7L_178
HL_43613.5
HL_5V8I_0451/1A/1806:1811No text annotation
Not in a motif group
homologous
HL_7RQB_046
HL_42097.1
HL_5V8I_0461/1A/1864:1878No text annotation
Not in a motif group
homologous
HL_7RQB_047
HL_42097.1
HL_5V8I_0471/1A/1909:1921No text annotation
Not in a motif group
homologous
HL_7RQB_048
NA
HL_5V8I_0481/1A/1949:1957No text annotation
Not in a motif group
homologous
HL_7RQB_049
HL_51824.1
HL_5V8I_0491/1A/2027:2036No text annotation
Not in a motif group
homologous
HL_7RQB_050
HL_90642.6
HL_5V8I_0511/1A/2205:2219No text annotation
Not in a motif group
homologous
HL_7RQB_052
HL_98426.1
HL_5V8I_0521/1A/2248:2256No text annotation
Not in a motif group
homologous
HL_7RQB_053
NA
HL_5V8I_0531/1A/2264:2276No text annotation
Not in a motif group
homologous
HL_7RQB_054
HL_19870.6
HL_5V8I_0541/1A/2303:2313No text annotation
Not in a motif group
homologous
HL_7RQB_055
HL_11805.3
HL_5V8I_0551/1A/2324:2331No text annotation
Not in a motif group
homologous
HL_7RQB_056
HL_12078.2
HL_5V8I_0561/1A/2355:2362No text annotation
Not in a motif group
homologous
HL_7RQB_057
HL_09136.1
HL_5V8I_0571/1A/2374:2379No text annotation
Not in a motif group
homologous
HL_7RQB_058
HL_42097.1
HL_5V8I_0581/1A/2404:2413No text annotation
Not in a motif group
homologous
HL_7RQB_059
HL_30784.2
HL_5V8I_0591/1A/2471:2479No text annotation
Not in a motif group
homologous
HL_7RQB_060
HL_06192.2
HL_5V8I_0601/1A/2528:2535No text annotation
Not in a motif group
homologous
HL_7RQB_061
HL_88526.2
HL_5V8I_0611/1A/2551:2557No text annotation
Not in a motif group
homologous
HL_5J7L_195
NA
HL_5V8I_0621/1A/2594:2599No text annotation
Not in a motif group
homologous
HL_7RQB_063
HL_42097.1
HL_5V8I_0631/1A/2658:2663No text annotation
Not in a motif group
homologous
HL_7RQB_064
HL_42097.1
HL_5V8I_0641/1A/2701:2706No text annotation
Not in a motif group
homologous
HL_7RQB_065
HL_53171.2
HL_5V8I_0651/1A/2745:2759No text annotation
Not in a motif group
homologous
HL_7RQB_066
HL_56677.7
HL_5V8I_0671/1A/2819:2827No text annotation
Not in a motif group
homologous
HL_4WF9_064
HL_27930.1
HL_5V8I_0681/1A/2856:2861No text annotation
Not in a motif group
homologous
HL_7RQB_069
HL_42097.1
HL_5V8I_0691/1B/38:44No text annotation
Not in a motif group
geometric
HL_7RQB_070
HL_87939.1
HL_5V8I_0701/1B/86:91No text annotation
Not in a motif group
homologous
HL_7RQB_071
HL_42097.1
HL_5V8I_0711/1a/12:22No text annotation
Not in a motif group
homologous
HL_4LFB_001
HL_89881.2
HL_5V8I_0731/1a/158:163GNRA
Not in a motif group
homologous
HL_6CZR_074
HL_53845.1
HL_5V8I_0741/1a/189C:189HNo text annotation
Not in a motif group
homologous
HL_6CZR_075
HL_10278.1
HL_5V8I_0751/1a/200:217No text annotation
Not in a motif group
homologous
HL_6CZR_076
HL_34168.2
HL_5V8I_0761/1a/259:267No text annotation
Not in a motif group
homologous
HL_4LFB_006
HL_69023.2
HL_5V8I_0771/1a/296:301GNRA
Not in a motif group
homologous
HL_4LFB_007
HL_42097.1
HL_5V8I_0781/1a/320:333No text annotation
Not in a motif group
homologous
HL_5J7L_008
HL_81205.2
HL_5V8I_0791/1a/342:347No text annotation
Not in a motif group
homologous
HL_6CZR_080
HL_03562.2
HL_5V8I_0801/1a/379:384GNRA
Not in a motif group
homologous
HL_4LFB_010
HL_42097.1
HL_5V8I_0811/1a/419:424UNCG
Not in a motif group
homologous
HL_4LFB_011
HL_03562.2
HL_5V8I_0821/1a/458:473No text annotation
Not in a motif group
homologous
HL_4LFB_012
HL_43656.2
HL_5V8I_0831/1a/521:528No text annotation
Not in a motif group
geometric
HL_2Y9H_003
HL_16173.1
HL_5V8I_0841/1a/617:623No text annotation
Not in a motif group
homologous
HL_4LFB_014
HL_26881.1
HL_5V8I_0851/1a/689:698No text annotation
Not in a motif group
homologous
HL_4LFB_015
HL_12326.1
HL_5V8I_0861/1a/726:731Other HL
Not in a motif group
homologous
HL_4LFB_016
HL_87030.2
HL_5V8I_0871/1a/786:796No text annotation
Not in a motif group
homologous
HL_4LFB_017
HL_12326.1
HL_5V8I_0881/1a/838:848No text annotation
Not in a motif group
homologous
HL_6CZR_089
HL_53837.1
HL_5V8I_0891/1a/862:867GNRA
Not in a motif group
homologous
HL_4LFB_019
HL_42097.1
HL_5V8I_0901/1a/897:902GNRA
Not in a motif group
homologous
HL_6CZR_091
HL_42097.1
HL_5V8I_0911/1a/963:972No text annotation
Not in a motif group
homologous
HL_4LFB_021
NA
HL_5V8I_0921/1a/1012:1017GNRA
Not in a motif group
homologous
HL_4LFB_022
HL_42097.1
HL_5V8I_0931/1a/1029:1032No text annotation
Not in a motif group
homologous
HL_6CZR_094
NA
HL_5V8I_0941/1a/1076:1081GNRA
Not in a motif group
homologous
HL_4LFB_024
HL_42097.1
HL_5V8I_0951/1a/1089:1096No text annotation
Not in a motif group
homologous
HL_4LFB_025
HL_71554.2
HL_5V8I_0961/1a/1134:1140No text annotation
Not in a motif group
homologous
HL_6CZR_097
NA
HL_5V8I_0971/1a/1165:1171GNRA
Not in a motif group
homologous
HL_4LFB_027
HL_42097.1
HL_5V8I_0981/1a/1265:1270Other HL
Not in a motif group
homologous
HL_4LFB_028
HL_42097.1
HL_5V8I_0991/1a/1314:1323No text annotation
Not in a motif group
homologous
HL_4LFB_029
HL_89380.2
HL_5V8I_1001/1a/1356:1366No text annotation
Not in a motif group
HL_5V8I_1011/1a/1445:1457No text annotation
Not in a motif group
homologous
HL_6CZR_102
HL_49722.1
HL_5V8I_1021/1a/1515:1520No text annotation
Not in a motif group
homologous
HL_4LFB_032
NA
HL_5V8I_1031/2A/59:68No text annotation
Not in a motif group
homologous
HL_7RQB_001
HL_99167.1
HL_5V8I_1041/2A/87:95No text annotation
Not in a motif group
homologous
HL_7RQB_002
HL_96598.1
HL_5V8I_1051/2A/123:128No text annotation
Not in a motif group
homologous
HL_5J7L_136
HL_75407.1
HL_5V8I_1061/2A/139:142ANo text annotation
Not in a motif group
homologous
HL_7RQB_004
HL_79921.2
HL_5V8I_1081/2A/194:201No text annotation
Not in a motif group
geometric
HL_5J7L_139
HL_06192.2
HL_5V8I_1091/2A/225:230No text annotation
Not in a motif group
homologous
HL_7RQB_007
HL_02862.2
HL_5V8I_1101/2A/246:252No text annotation
Not in a motif group
homologous
HL_7RQB_008
HL_67216.7
HL_5V8I_1111/2A/271I:271OOther HL
Not in a motif group
geometric
HL_5J7L_200
HL_34168.2
HL_5V8I_1121/2A/305:312No text annotation
Not in a motif group
homologous
HL_7RQB_010
HL_89380.2
HL_5V8I_1131/2A/319:323No text annotation
Not in a motif group
homologous
HL_4WF9_011
HL_75407.1
HL_5V8I_1141/2A/327:335No text annotation
Not in a motif group
homologous
HL_5J7L_144
HL_08002.8
HL_5V8I_1151/2A/382:392No text annotation
Not in a motif group
homologous
HL_7RQB_013
HL_91503.4
HL_5V8I_1161/2A/410:417No text annotation
Not in a motif group
homologous
HL_7RQB_014
HL_96598.1
HL_5V8I_1171/2A/462:467GNRA
Not in a motif group
homologous
HL_4WF9_015
HL_42097.1
HL_5V8I_1181/2A/487:493No text annotation
Not in a motif group
homologous
HL_7RQB_016
HL_42097.1
HL_5V8I_1201/2A/566:575No text annotation
Not in a motif group
geometric
HL_7RQB_018
HL_89380.2
HL_5V8I_1211/2A/612:615No text annotation
Not in a motif group
homologous
HL_7RQB_019
HL_32369.1
HL_5V8I_1221/2A/629:634No text annotation
Not in a motif group
homologous
HL_7RQB_020
HL_42097.1
HL_5V8I_1231/2A/641:647No text annotation
Not in a motif group
homologous
HL_7RQB_021
HL_42097.1
HL_5V8I_1241/2A/712:719No text annotation
Not in a motif group
homologous
HL_7RQB_022
HL_84085.2
HL_5V8I_1251/2A/744:753No text annotation
Not in a motif group
homologous
HL_7RQB_023
HL_39334.6
HL_5V8I_1261/2A/779:785No text annotation
Not in a motif group
homologous
HL_5J7L_156
HL_74322.1
HL_5V8I_1271/2A/826:831No text annotation
Not in a motif group
homologous
HL_4WF9_025
HL_64365.1
HL_5V8I_1281/2A/884:892No text annotation
Not in a motif group
homologous
HL_7RQB_026
HL_27930.1
HL_5V8I_1291/2A/955:962No text annotation
Not in a motif group
homologous
HL_7RQB_027
HL_42097.1
HL_5V8I_1301/2A/978:985No text annotation
Not in a motif group
homologous
HL_7RQB_028
HL_64430.2
HL_5V8I_1311/2A/1063:1075No text annotation
Not in a motif group
HL_5V8I_1321/2A/1091:1100No text annotation
Not in a motif group
HL_5V8I_1341/2A/1222:1227No text annotation
Not in a motif group
homologous
HL_7RQB_032
HL_42097.1
HL_5V8I_1351/2A/1281:1289No text annotation
Not in a motif group
homologous
HL_7RQB_033
HL_89380.2
HL_5V8I_1361/2A/1324:1330No text annotation
Not in a motif group
homologous
HL_7RQB_034
HL_46680.1
HL_5V8I_1371/2A/1363:1368No text annotation
Not in a motif group
homologous
HL_7RQB_035
HL_87030.2
HL_5V8I_1381/2A/1389:1398No text annotation
Not in a motif group
homologous
HL_7RQB_036
HL_69023.2
HL_5V8I_1391/2A/1451:1459No text annotation
Not in a motif group
homologous
HL_7RQB_037
HL_32426.1
HL_5V8I_1401/2A/1492:1498No text annotation
Not in a motif group
homologous
HL_7RQB_038
HL_46680.1
HL_5V8I_1421/2A/1565:1568No text annotation
Not in a motif group
homologous
HL_7RQB_039
HL_38927.2
HL_5V8I_1431/2A/1612:1619No text annotation
Not in a motif group
homologous
HL_7RQB_040
HL_64430.2
HL_5V8I_1441/2A/1631:1635No text annotation
Not in a motif group
homologous
HL_7RQB_041
HL_01057.1
HL_5V8I_1451/2A/1691:1696No text annotation
Not in a motif group
homologous
HL_7RQB_042
HL_03562.2
HL_5V8I_1461/2A/1720:1742No text annotation
Not in a motif group
homologous
HL_7RQB_043
HL_43656.2
HL_5V8I_1471/2A/1752:1756No text annotation
Not in a motif group
homologous
HL_7RQB_044
HL_76539.2
HL_5V8I_1481/2A/1777:1787No text annotation
Not in a motif group
homologous
HL_7RQB_045
HL_43613.5
HL_5V8I_1491/2A/1806:1811No text annotation
Not in a motif group
homologous
HL_7RQB_046
HL_42097.1
HL_5V8I_1501/2A/1864:1878No text annotation
Not in a motif group
homologous
HL_7RQB_047
HL_42097.1
HL_5V8I_1511/2A/1909:1921No text annotation
Not in a motif group
homologous
HL_7RQB_048
NA
HL_5V8I_1521/2A/1949:1957No text annotation
Not in a motif group
homologous
HL_7RQB_049
HL_51824.1
HL_5V8I_1531/2A/2027:2036No text annotation
Not in a motif group
homologous
HL_7RQB_050
HL_90642.6
HL_5V8I_1551/2A/2205:2219No text annotation
Not in a motif group
homologous
HL_7RQB_052
HL_98426.1
HL_5V8I_1561/2A/2248:2256No text annotation
Not in a motif group
homologous
HL_4WF9_049
HL_53171.2
HL_5V8I_1571/2A/2264:2276No text annotation
Not in a motif group
homologous
HL_7RQB_054
HL_19870.6
HL_5V8I_1581/2A/2303:2313No text annotation
Not in a motif group
homologous
HL_7RQB_055
HL_11805.3
HL_5V8I_1591/2A/2324:2331No text annotation
Not in a motif group
homologous
HL_7RQB_056
HL_12078.2
HL_5V8I_1601/2A/2355:2362No text annotation
Not in a motif group
homologous
HL_7RQB_057
HL_09136.1
HL_5V8I_1611/2A/2374:2379No text annotation
Not in a motif group
homologous
HL_7RQB_058
HL_42097.1
HL_5V8I_1621/2A/2404:2413No text annotation
Not in a motif group
homologous
HL_7RQB_059
HL_30784.2
HL_5V8I_1631/2A/2471:2479No text annotation
Not in a motif group
homologous
HL_7RQB_060
HL_06192.2
HL_5V8I_1641/2A/2528:2535No text annotation
Not in a motif group
homologous
HL_7RQB_061
HL_88526.2
HL_5V8I_1651/2A/2551:2557No text annotation
Not in a motif group
homologous
HL_5J7L_195
NA
HL_5V8I_1661/2A/2594:2599No text annotation
Not in a motif group
homologous
HL_7RQB_063
HL_42097.1
HL_5V8I_1671/2A/2658:2663GNRA
Not in a motif group
geometric
HL_5B2T_003
HL_42097.1
HL_5V8I_1681/2A/2701:2706No text annotation
Not in a motif group
homologous
HL_7RQB_065
HL_53171.2
HL_5V8I_1691/2A/2745:2759No text annotation
Not in a motif group
homologous
HL_7RQB_066
HL_56677.7
HL_5V8I_1711/2A/2819:2827No text annotation
Not in a motif group
homologous
HL_7RQB_068
HL_27930.1
HL_5V8I_1721/2A/2856:2861No text annotation
Not in a motif group
homologous
HL_7RQB_069
HL_42097.1
HL_5V8I_1731/2B/38:44No text annotation
Not in a motif group
homologous
HL_7RQB_070
HL_87939.1
HL_5V8I_1741/2B/86:91No text annotation
Not in a motif group
homologous
HL_7RQB_071
HL_42097.1
HL_5V8I_1751/2a/12:22No text annotation
Not in a motif group
homologous
HL_4LFB_001
HL_89881.2
HL_5V8I_1771/2a/158:163GNRA
Not in a motif group
homologous
HL_4LFB_003
HL_42097.1
HL_5V8I_1781/2a/189C:189HNo text annotation
Not in a motif group
homologous
HL_4LFB_004
HL_10278.1
HL_5V8I_1791/2a/200:217No text annotation
Not in a motif group
homologous
HL_6CZR_076
HL_34168.2
HL_5V8I_1801/2a/259:267No text annotation
Not in a motif group
homologous
HL_4LFB_006
HL_69023.2
HL_5V8I_1811/2a/296:301GNRA
Not in a motif group
homologous
HL_5J7L_007
HL_42097.1
HL_5V8I_1821/2a/320:333No text annotation
Not in a motif group
homologous
HL_5J7L_008
HL_81205.2
HL_5V8I_1831/2a/342:347UNCG
Not in a motif group
homologous
HL_4LFB_009
HL_03562.2
HL_5V8I_1841/2a/379:384GNRA
Not in a motif group
homologous
HL_4LFB_010
HL_42097.1
HL_5V8I_1851/2a/419:424UNCG
Not in a motif group
homologous
HL_4LFB_011
HL_03562.2
HL_5V8I_1861/2a/458:473No text annotation
Not in a motif group
homologous
HL_4LFB_012
HL_43656.2
HL_5V8I_1871/2a/521:528No text annotation
Not in a motif group
geometric
HL_1WZ2_007
HL_10278.1
HL_5V8I_1881/2a/617:623No text annotation
Not in a motif group
homologous
HL_4LFB_014
HL_26881.1
HL_5V8I_1891/2a/689:698No text annotation
Not in a motif group
homologous
HL_4LFB_015
HL_12326.1
HL_5V8I_1901/2a/726:731Other HL
Not in a motif group
homologous
HL_4LFB_016
HL_87030.2
HL_5V8I_1911/2a/786:796No text annotation
Not in a motif group
homologous
HL_4LFB_017
HL_12326.1
HL_5V8I_1921/2a/838:848No text annotation
Not in a motif group
homologous
HL_6CZR_089
HL_53837.1
HL_5V8I_1931/2a/862:867GNRA
Not in a motif group
homologous
HL_4LFB_019
HL_42097.1
HL_5V8I_1941/2a/897:902GNRA
Not in a motif group
homologous
HL_4LFB_020
HL_42097.1
HL_5V8I_1951/2a/963:972No text annotation
Not in a motif group
homologous
HL_4LFB_021
NA
HL_5V8I_1961/2a/1012:1017GNRA
Not in a motif group
homologous
HL_4LFB_022
HL_42097.1
HL_5V8I_1981/2a/1076:1081GNRA
Not in a motif group
homologous
HL_4LFB_024
HL_42097.1
HL_5V8I_1991/2a/1089:1096No text annotation
Not in a motif group
homologous
HL_4LFB_025
HL_71554.2
HL_5V8I_2001/2a/1134:1140No text annotation
Not in a motif group
homologous
HL_6CZR_097
NA
HL_5V8I_2011/2a/1165:1171GNRA
Not in a motif group
homologous
HL_4LFB_027
HL_42097.1
HL_5V8I_2021/2a/1265:1270GNRA
Not in a motif group
homologous
HL_5J7L_027
HL_42097.1
HL_5V8I_2031/2a/1314:1323No text annotation
Not in a motif group
homologous
HL_4LFB_029
HL_89380.2
HL_5V8I_2041/2a/1356:1366No text annotation
Not in a motif group
HL_5V8I_2051/2a/1445:1457No text annotation
Not in a motif group
homologous
HL_6CZR_102
HL_49722.1
HL_5V8I_2061/2a/1515:1520No text annotation
Not in a motif group
homologous
HL_4LFB_032
NA

Problematic loops

#loop idProblemSequence
HL_5V8I_016No text annotation
HL_5V8I_050No text annotation
HL_5V8I_066No text annotation
HL_5V8I_072No text annotation
HL_5V8I_107No text annotation
HL_5V8I_119No text annotation
HL_5V8I_133No text annotation
HL_5V8I_141No text annotation
HL_5V8I_154No text annotation
HL_5V8I_170No text annotation
HL_5V8I_176No text annotation
HL_5V8I_197No text annotation

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
IL_5V8I_0011/1A/24:30,
1/1A/510:516
Triple sheared with non-canonical cWW
Not in a motif group
homologous
IL_7RQB_001
IL_66414.6
IL_5V8I_0021/1A/36:37,
1/1A/442:444
Single bulged A
Not in a motif group
homologous
IL_7RQB_002
IL_37497.2
IL_5V8I_0031/1A/42:43,
1/1A/434:436
Minor groove platform
Not in a motif group
homologous
IL_7RQB_003
IL_42622.2
IL_5V8I_0041/1A/81:85,
1/1A/97:105
Kink-turn
Not in a motif group
homologous
IL_7RQB_004
IL_45067.2
IL_5V8I_0051/1A/183:184,
1/1A/212:214
Single stack bend
Not in a motif group
homologous
IL_7RQB_005
IL_76488.2
IL_5V8I_0061/1A/188:194,
1/1A/201:208
8x7 Sarcin-Ricin; G-bulge
Not in a motif group
homologous
IL_7RQB_006
IL_04346.7
IL_5V8I_0071/1A/239:245,
1/1A/253:258
7x6 Sarcin-Ricin; G-bulge
Not in a motif group
homologous
IL_7RQB_007
IL_76042.2
IL_5V8I_0081/1A/272D:272E,
1/1A/363E:364
Major groove platform
Not in a motif group
homologous
IL_7RQB_009
IL_27635.1
IL_5V8I_0101/1A/280:284,
1/1A/357:360
tSH-tHW
Not in a motif group
homologous
IL_7RQB_011
IL_04059.1
IL_5V8I_0111/1A/288:290,
1/1A/350:353
Isolated tHS basepair with bulges
Not in a motif group
homologous
IL_7RQB_012
IL_38958.7
IL_5V8I_0121/1A/293:295,
1/1A/343:347
No text annotation
Not in a motif group
homologous
IL_7RQB_013
IL_69440.1
IL_5V8I_0131/1A/481:484,
1/1A/496:509
No text annotation
Not in a motif group
homologous
IL_7RQB_014
IL_60992.6
IL_5V8I_0141/1A/564:566,
1/1A/575:577
No text annotation
Not in a motif group
geometric
IL_5J7L_257
IL_95997.1
IL_5V8I_0151/1A/606:610,
1/1A/618:622
AAA cross-strand stack
Not in a motif group
homologous
IL_7RQB_016
IL_17136.1
IL_5V8I_0161/1A/672:674,
1/1A/806:808
No text annotation
Not in a motif group
homologous
IL_7RQB_017
IL_95997.1
IL_5V8I_0171/1A/674:678,
1/1A/799:806
No text annotation
Not in a motif group
geometric
IL_7RQB_018
IL_17470.6
IL_5V8I_0181/1A/697:698,
1/1A/763:765
Single bulged A
Not in a motif group
homologous
IL_7RQB_019
IL_37497.2
IL_5V8I_0191/1A/702:703,
1/1A/728:730
Single bulged G
Not in a motif group
homologous
IL_7RQB_020
IL_00225.2
IL_5V8I_0201/1A/703:707,
1/1A/724:728
Triple sheared
Not in a motif group
geometric
IL_7RQB_021
IL_56467.8
IL_5V8I_0211/1A/738:741,
1/1A/756:758
Major groove platform with extra cWW
Not in a motif group
homologous
IL_7RQB_022
IL_05564.2
IL_5V8I_0221/1A/775:777,
1/1A/787:791
Multiple bulged bases
Not in a motif group
geometric
IL_7RQB_023
IL_90991.6
IL_5V8I_0231/1A/837:838,
1/1A/940:942
Single stack bend
Not in a motif group
homologous
IL_7RQB_024
IL_92001.1
IL_5V8I_0241/1A/844:846,
1/1A/931:934
Intercalated cWW
Not in a motif group
geometric
IL_7RQB_025
IL_52767.2
IL_5V8I_0251/1A/846:850,
1/1A/927:931
No text annotation
Not in a motif group
homologous
IL_7RQB_026
IL_94165.1
IL_5V8I_0261/1A/857:862,
1/1A/915:920
5x5 Sarcin-Ricin with intercalated A; G-bulge
Not in a motif group
geometric
IL_7A0S_027
IL_81631.1
IL_5V8I_0271/1A/862:863,
1/1A/913:915
Minor groove platform
Not in a motif group
homologous
IL_7RQB_028
IL_42622.2
IL_5V8I_0281/1A/864:868,
1/1A/909:912
C-loop
Not in a motif group
homologous
IL_7RQB_029
IL_02509.1
IL_5V8I_0291/1A/875:877,
1/1A/899:902
Minor groove platform with extra cWW
Not in a motif group
geometric
IL_7RQB_031
IL_46796.1
IL_5V8I_0301/1A/877:879,
1/1A/898:899
Minor groove platform
Not in a motif group
homologous
IL_7RQB_032
IL_93353.1
IL_5V8I_0311/1A/880:881,
1/1A/895:897
Single bulged A
Not in a motif group
homologous
IL_7RQB_033
IL_37497.2
IL_5V8I_0321/1A/952:954,
1/1A/963:965
No text annotation
Not in a motif group
homologous
IL_7RQB_034
IL_95997.1
IL_5V8I_0331/1A/994:996,
1/1A/1159:1160
Single bulged C
Not in a motif group
homologous
IL_7RQB_035
IL_61258.12
IL_5V8I_0341/1A/998:1002,
1/1A/1153:1157
UAA/GAN
Not in a motif group
homologous
IL_7RQB_036
IL_89002.2
IL_5V8I_0351/1A/1004:1011,
1/1A/1150:1151
SSU/LSU pseudoknot
Not in a motif group
geometric
IL_7RQB_037
IL_15861.7
IL_5V8I_0361/1A/1011:1013,
1/1A/1149:1150
Single bulged U
Not in a motif group
homologous
IL_7RQB_038
IL_83039.13
IL_5V8I_0371/1A/1018:1024,
1/1A/1140:1144
No text annotation
Not in a motif group
geometric
IL_7RQB_039
IL_57188.3
IL_5V8I_0381/1A/1024:1030,
1/1A/1124:1140
No text annotation
Not in a motif group
geometric
IL_7RQB_040
IL_50715.1
IL_5V8I_0391/1A/1031:1034,
1/1A/1121:1123
Isolated non-canonical cWW with bulges
Not in a motif group
homologous
IL_5J7L_282
IL_82068.2
IL_5V8I_0401/1A/1043:1051,
1/1A/1108:1112
Kink-turn
Not in a motif group
homologous
IL_7RQB_042
IL_90538.4
IL_5V8I_0411/1A/1087:1091,
1/1A/1100:1102
Major groove platform with extra cWW
Not in a motif group
geometric
IL_1MMS_002
IL_05564.2
IL_5V8I_0421/1A/1196:1198,
1/1A/1247:1250
Isolated cWS basepair
Not in a motif group
homologous
IL_7RQB_045
IL_52767.2
IL_5V8I_0431/1A/1202:1206,
1/1A/1240:1243
No text annotation
Not in a motif group
homologous
IL_7RQB_046
IL_68574.2
IL_5V8I_0441/1A/1208:1215,
1/1A/1234:1238
Kink-turn
Not in a motif group
homologous
IL_7RQB_047
IL_70923.2
IL_5V8I_0451/1A/1219:1221,
1/1A/1229:1230
Single bulged A
Not in a motif group
homologous
IL_7RQB_048
IL_37497.2
IL_5V8I_0461/1A/1262:1269,
1/1A/2011:2017
8x7 Sarcin-Ricin; G-bulge
Not in a motif group
homologous
IL_7RQB_049
IL_04346.7
IL_5V8I_0471/1A/1310:1313,
1/1A/1603:1604
Major groove platform; stack outside cWW
Not in a motif group
homologous
IL_7RQB_050
IL_50694.2
IL_5V8I_0481/1A/1319:1323,
1/1A/1331:1333
C-loop
Not in a motif group
homologous
IL_7RQB_051
IL_63596.6
IL_5V8I_0491/1A/1351:1355,
1/1A/1376:1380
UAA/GAN
Not in a motif group
homologous
IL_7RQB_052
IL_89002.2
IL_5V8I_0501/1A/1357:1361,
1/1A/1370:1374
tSH-tHW-tHS
Not in a motif group
homologous
IL_7RQB_053
IL_17136.1
IL_5V8I_0511/1A/1415:1416,
1/1A/1582:1587
No text annotation
Not in a motif group
homologous
IL_7RQB_054
IL_67474.4
IL_5V8I_0521/1A/1417:1421,
1/1A/1577:1581
UAA/GAN
Not in a motif group
homologous
IL_7RQB_055
IL_89002.2
IL_5V8I_0531/1A/1433:1435,
1/1A/1557:1560
Isolated tWW turn
Not in a motif group
homologous
IL_7RQB_056
IL_54997.7
IL_5V8I_0541/1A/1437:1440,
1/1A/1551:1555
tSH-tHW
Not in a motif group
homologous
IL_7RQB_057
IL_04059.1
IL_5V8I_0551/1A/1448:1450,
1/1A/1462:1463
Single stack bend
Not in a motif group
homologous
IL_7RQB_058
IL_76488.2
IL_5V8I_0561/1A/1450A:1451,
1/1A/1459:1461
Single bulged A
Not in a motif group
geometric
IL_7RQB_059
IL_37497.2
IL_5V8I_0571/1A/1469:1473,
1/1A/1518:1523
UAA/GAN
Not in a motif group
homologous
IL_7RQB_060
IL_07235.1
IL_5V8I_0581/1A/1481:1482,
1/1A/1506:1510
No text annotation
Not in a motif group
homologous
IL_7RQB_061
IL_52493.1
IL_5V8I_0591/1A/1489:1491,
1/1A/1499:1500
Single bulged A
Not in a motif group
homologous
IL_7RQB_062
IL_37497.2
IL_5V8I_0601/1A/1526:1529,
1/1A/1540:1546
No text annotation
Not in a motif group
homologous
IL_7RQB_063
IL_02656.1
IL_5V8I_0611/1A/1651:1656,
1/1A/2004:2006
No text annotation
Not in a motif group
homologous
IL_7RQB_064
IL_12566.2
IL_5V8I_0621/1A/1663:1665,
1/1A/1995:1997
Isolated tWW turn
Not in a motif group
homologous
IL_7RQB_065
IL_54997.7
IL_5V8I_0631/1A/1666:1669,
1/1A/1993:1994
Major groove platform; stack outside cWW
Not in a motif group
geometric
IL_7RQB_066
IL_50694.2
IL_5V8I_0641/1A/1669:1674,
1/1A/1990:1993
Intercalated tWH
Not in a motif group
homologous
IL_7RQB_067
IL_82842.2
IL_5V8I_0651/1A/1686:1691,
1/1A/1696:1702
tSH-tSH-tHH-tHS
Not in a motif group
geometric
IL_7RQB_068
IL_65969.2
IL_5V8I_0661/1A/1770:1771,
1/1A/1980:1982
Single bulged A
Not in a motif group
homologous
IL_7RQB_069
IL_37497.2
IL_5V8I_0671/1A/1798:1804,
1/1A/1813:1821
Kink-turn related
Not in a motif group
homologous
IL_7RQB_070
IL_17069.3
IL_5V8I_0681/1A/1837:1840,
1/1A/1902:1903
Major groove outside cWW, minor groove, intercalation pocket
Not in a motif group
homologous
IL_7RQB_071
IL_88739.1
IL_5V8I_0691/1A/1841:1842,
1/1A/1898:1901
Major groove outside cWW, minor groove, intercalation pocket
Not in a motif group
homologous
IL_7RQB_072
IL_16396.2
IL_5V8I_0701/1A/1846:1849,
1/1A/1893:1894
Minor groove platform
Not in a motif group
homologous
IL_7RQB_073
IL_88739.1
IL_5V8I_0711/1A/1851:1855,
1/1A/1887:1891
UAA/GAN with extra pair
Not in a motif group
homologous
IL_7RQB_074
IL_90318.1
IL_5V8I_0721/1A/1856:1860,
1/1A/1882:1886
Triple sheared
Not in a motif group
homologous
IL_7RQB_075
IL_56467.8
IL_5V8I_0731/1A/1933:1934,
1/1A/1964:1967
Multiple bulged bases
Not in a motif group
geometric
IL_7RQB_076
IL_59677.2
IL_5V8I_0741/1A/1934:1945,
1/1A/1961:1964
No text annotation
Not in a motif group
homologous
IL_7RQB_077
NA
IL_5V8I_0751/1A/2050:2052,
1/1A/2617:2618
Major groove platform
Not in a motif group
homologous
IL_7RQB_078
IL_27635.1
IL_5V8I_0761/1A/2054:2057,
1/1A/2611:2615
No text annotation
Not in a motif group
IL_5V8I_0771/1A/2067:2069,
1/1A/2442:2443
Single bulged U
Not in a motif group
homologous
IL_7RQB_080
IL_83039.13
IL_5V8I_0781/1A/2070:2071,
1/1A/2438:2441
Minor groove platform
Not in a motif group
homologous
IL_7RQB_081
IL_42622.2
IL_5V8I_0791/1A/2081:2083,
1/1A/2236:2239
Isolated tHS basepair with bulges
Not in a motif group
homologous
IL_7RQB_082
IL_38958.7
IL_5V8I_0801/1A/2085:2087,
1/1A/2232:2234
No text annotation
Not in a motif group
homologous
IL_7RQB_083
IL_95997.1
IL_5V8I_0821/1A/2110:2120,
1/1A/2178:2179
No text annotation
Not in a motif group
homologous
IL_7RQB_085
NA
IL_5V8I_0841/1A/2129:2136,
1/1A/2155:2159
No text annotation
Not in a motif group
homologous
IL_7RQB_087
NA
IL_5V8I_0851/1A/2297:2299,
1/1A/2317:2321
Isolated tHS basepair with bulges
Not in a motif group
geometric
IL_7RQB_088
IL_38958.7
IL_5V8I_0861/1A/2350:2353,
1/1A/2364:2367
Double sheared
Not in a motif group
homologous
IL_7RQB_089
IL_09705.9
IL_5V8I_0871/1A/2401:2403,
1/1A/2414:2415
Major groove platform
Not in a motif group
homologous
IL_7RQB_090
IL_27635.1
IL_5V8I_0881/1A/2453:2454,
1/1A/2498:2500
Single stack bend
Not in a motif group
geometric
IL_7RQB_091
IL_76488.2
IL_5V8I_0891/1A/2454:2455,
1/1A/2496:2498
Major groove platform
Not in a motif group
homologous
IL_7RQB_092
IL_27635.1
IL_5V8I_0901/1A/2457:2459,
1/1A/2493:2494
Major groove platform
Not in a motif group
homologous
IL_4WF9_091
IL_27635.1
IL_5V8I_0911/1A/2459:2461,
1/1A/2489:2493
Major groove minor groove platform with extra cWW
Not in a motif group
geometric
IL_7RQB_094
IL_92788.2
IL_5V8I_0921/1A/2466:2470,
1/1A/2480:2484
Triple sheared
Not in a motif group
homologous
IL_7RQB_095
IL_56467.8
IL_5V8I_0931/1A/2507:2508,
1/1A/2580:2582
Major groove platform
Not in a motif group
homologous
IL_4WF9_094
IL_76223.2
IL_5V8I_0941/1A/2510:2512,
1/1A/2574:2578
Isolated non-canonical cWW with bulges
Not in a motif group
homologous
IL_7RQB_097
IL_90933.2
IL_5V8I_0951/1A/2512:2513,
1/1A/2571:2574
Multiple bulged bases
Not in a motif group
geometric
IL_7RQB_098
IL_71530.2
IL_5V8I_0961/1A/2522:2523,
1/1A/2540:2543
Minor groove platform with intercalation
Not in a motif group
homologous
IL_5J7L_342
IL_95601.3
IL_5V8I_0971/1A/2588:2590,
1/1A/2604:2606
No text annotation
Not in a motif group
homologous
IL_7RQB_100
NA
IL_5V8I_0981/1A/2591:2592,
1/1A/2601:2603
Single bulged A
Not in a motif group
geometric
IL_4V9F_090
IL_37497.2
IL_5V8I_0991/1A/2636:2640,
1/1A/2774:2782
tSH-tHS-tHW
Not in a motif group
homologous
IL_7RQB_102
IL_04638.1
IL_5V8I_1001/1A/2652:2658,
1/1A/2663:2668
Sarcin-Ricin target in LSU H95; G-bulge
Not in a motif group
geometric
IL_7RQB_103
IL_16458.1
IL_5V8I_1011/1A/2680:2684,
1/1A/2725:2727
C-loop
Not in a motif group
homologous
IL_7RQB_104
IL_63596.6
IL_5V8I_1021/1A/2687:2691,
1/1A/2718:2722
No text annotation
Not in a motif group
homologous
IL_7RQB_105
IL_08296.3
IL_5V8I_1031/1A/2695:2696,
1/1A/2711:2714
Multiple bulged bases
Not in a motif group
homologous
IL_7RQB_106
IL_71530.2
IL_5V8I_1041/1A/2737:2742,
1/1A/2762:2767
UAA/GAN with extra cWW
Not in a motif group
homologous
IL_7RQB_107
IL_49767.5
IL_5V8I_1051/1A/2838:2839,
1/1A/2878:2880
Single bulged C
Not in a motif group
homologous
IL_7RQB_108
IL_61258.12
IL_5V8I_1061/1A/2843:2846,
1/1A/2870:2874
No text annotation
Not in a motif group
homologous
IL_7RQB_109
IL_58764.3
IL_5V8I_1071/1A/2847:2852,
1/1A/2865:2869
No text annotation
Not in a motif group
homologous
IL_7RQB_110
IL_83162.5
IL_5V8I_1081/1B/17:18,
1/1B/65:67
Major groove intercalation
Not in a motif group
homologous
IL_7RQB_111
IL_37497.2
IL_5V8I_1091/1B/23:28,
1/1B/56:60
No text annotation
Not in a motif group
homologous
IL_7RQB_112
NA
IL_5V8I_1101/1B/30:31,
1/1B/51:54
Major groove minor groove platform; mini C-loop
Not in a motif group
homologous
IL_7RQB_113
IL_09061.6
IL_5V8I_1111/1B/34:38,
1/1B/44:48
Symmetric double minor groove platform
Not in a motif group
homologous
IL_7RQB_114
IL_58103.6
IL_5V8I_1121/1B/71:79,
1/1B/98:106
Bacterial 5S Loop E
Not in a motif group
homologous
IL_7RQB_115
IL_56455.3
IL_5V8I_1131/1a/30:32,
1/1a/552:553
Single bulged G
Not in a motif group
homologous
IL_5J7L_001
IL_00225.2
IL_5V8I_1141/1a/44:45,
1/1a/396:398
Single bulged A
Not in a motif group
homologous
IL_4LFB_002
IL_37497.2
IL_5V8I_1151/1a/47:52,
1/1a/359:361
No text annotation
Not in a motif group
geometric
IL_4LFB_003
IL_11178.1
IL_5V8I_1161/1a/54:56,
1/1a/356:357
Minor groove platform
Not in a motif group
homologous
IL_4LFB_004
IL_93353.1
IL_5V8I_1171/1a/63:66,
1/1a/103:104
Multiple bulged bases
Not in a motif group
homologous
IL_5J7L_005
IL_76389.1
IL_5V8I_1181/1a/67:69,
1/1a/100:102
No text annotation
Not in a motif group
homologous
IL_4LFB_006
IL_95997.1
IL_5V8I_1191/1a/129:131,
1/1a/231:232
Multiple bulged bases
Not in a motif group
homologous
IL_4LFB_007
IL_16396.2
IL_5V8I_1201/1a/132:136,
1/1a/227:230
No text annotation
Not in a motif group
homologous
IL_4LFB_008
IL_58764.3
IL_5V8I_1211/1a/148:153,
1/1a/168:174
tWH-tWH-tHW-tHW
Not in a motif group
homologous
IL_4LFB_009
IL_39753.1
IL_5V8I_1221/1a/186:188,
1/1a/189L:191
No text annotation
Not in a motif group
homologous
IL_4LFB_010
IL_95997.1
IL_5V8I_1231/1a/242:247,
1/1a/277:284
Kink-turn with non-sequential stacking
Not in a motif group
homologous
IL_6CZR_123
IL_45067.2
IL_5V8I_1241/1a/249:252,
1/1a/274:275
No text annotation
Not in a motif group
homologous
IL_4LFB_012
IL_48100.2
IL_5V8I_1251/1a/292:293,
1/1a/304:308
C-loop
Not in a motif group
homologous
IL_6CZR_125
IL_37712.2
IL_5V8I_1261/1a/367:369,
1/1a/392:393
Single bulged U
Not in a motif group
homologous
IL_4LFB_014
IL_83039.13
IL_5V8I_1271/1a/371:375,
1/1a/389:390
C-loop
Not in a motif group
geometric
IL_5J7L_018
IL_75255.1
IL_5V8I_1281/1a/375:376,
1/1a/387:389
Single bulged G
Not in a motif group
homologous
IL_5J7L_019
IL_00225.2
IL_5V8I_1291/1a/409:416,
1/1a/427:433
No text annotation
Not in a motif group
homologous
IL_4LFB_017
IL_28026.1
IL_5V8I_1301/1a/446:450,
1/1a/483:488
6x5 Sarcin-Ricin; G-bulge
Not in a motif group
geometric
IL_4LFB_018
IL_88269.3
IL_5V8I_1311/1a/450:455,
1/1a/476:483
No text annotation
Not in a motif group
homologous
IL_4LFB_019
IL_11882.1
IL_5V8I_1321/1a/504:511,
1/1a/540:541
SSU/LSU pseudoknot
Not in a motif group
homologous
IL_4LFB_020
IL_15861.7
IL_5V8I_1331/1a/515:521,
1/1a/528:536
No text annotation
Not in a motif group
homologous
IL_4LFB_021
NA
IL_5V8I_1341/1a/569:575,
1/1a/880:881
No text annotation
Not in a motif group
homologous
IL_5J7L_026
IL_69996.1
IL_5V8I_1351/1a/580:584,
1/1a/757:761
tSH-tHW-tHS
Not in a motif group
homologous
IL_4LFB_023
IL_17136.1
IL_5V8I_1361/1a/594:596,
1/1a/644:645
Major groove platform
Not in a motif group
homologous
IL_4LFB_024
IL_27635.1
IL_5V8I_1371/1a/597:598,
1/1a/640:643
Major groove minor groove platform; mini C-loop
Not in a motif group
homologous
IL_5J7L_029
IL_09061.6
IL_5V8I_1381/1a/605:612,
1/1a/628:633
No text annotation
Not in a motif group
homologous
IL_4LFB_026
IL_78349.1
IL_5V8I_1391/1a/654:655,
1/1a/751:754
Major groove platform; stack outside cWW
Not in a motif group
homologous
IL_5J7L_031
IL_50694.2
IL_5V8I_1401/1a/657:658,
1/1a/747:749
Major groove platform
Not in a motif group
homologous
IL_6CZR_140
IL_27635.1
IL_5V8I_1411/1a/662:666,
1/1a/740:743
Tandem non-canonical cWW pairs
Not in a motif group
homologous
IL_4LFB_029
IL_71110.1
IL_5V8I_1421/1a/673:678,
1/1a/712:717
No text annotation
Not in a motif group
homologous
IL_4LFB_030
IL_04668.1
IL_5V8I_1431/1a/683:688,
1/1a/699:707
Kink-turn
Not in a motif group
homologous
IL_4LFB_031
IL_37722.1
IL_5V8I_1441/1a/774:778,
1/1a/804:805
Left turn
Not in a motif group
homologous
IL_4LFB_032
IL_29346.1
IL_5V8I_1451/1a/779:783,
1/1a/799:803
tSH-tHW-tHS
Not in a motif group
homologous
IL_4LFB_033
IL_17136.1
IL_5V8I_1461/1a/887:894,
1/1a/905:910
8x6 Sarcin-Ricin with inserted Y; G-bulge
Not in a motif group
homologous
IL_4LFB_034
IL_24606.2
IL_5V8I_1471/1a/922:923,
1/1a/1393:1395
Single bulged A
Not in a motif group
homologous
IL_5J7L_039
IL_37497.2
IL_5V8I_1481/1a/925:927,
1/1a/1390:1391
Single bulged G
Not in a motif group
homologous
IL_4LFB_036
IL_00225.2
IL_5V8I_1491/1a/933:935,
1/1a/1380:1384
Minor groove platform
Not in a motif group
homologous
IL_4LFB_037
IL_47078.1
IL_5V8I_1501/1a/953:954,
1/1a/1226:1228
No text annotation
Not in a motif group
homologous
IL_6CZR_150
NA
IL_5V8I_1511/1a/993:997,
1/1a/1044:1045
Minor groove platform
Not in a motif group
geometric
IL_5J7L_043
IL_47078.1
IL_5V8I_1521/1a/1048:1050,
1/1a/1208:1209
Single bulged U
Not in a motif group
geometric
IL_4LFB_042
IL_83039.13
IL_5V8I_1531/1a/1050:1052,
1/1a/1206:1208
No text annotation
Not in a motif group
homologous
IL_4LFB_043
NA
IL_5V8I_1541/1a/1052:1056,
1/1a/1204:1206
Isolated cWS basepair
Not in a motif group
geometric
IL_4LFB_044
IL_76319.2
IL_5V8I_1551/1a/1057:1058,
1/1a/1199:1203
Minor groove platform
Not in a motif group
homologous
IL_4LFB_045
IL_93353.1
IL_5V8I_1561/1a/1060:1061,
1/1a/1195:1197
Single bulged U
Not in a motif group
geometric
IL_6CZR_156
IL_83039.13
IL_5V8I_1571/1a/1061:1063,
1/1a/1193:1195
No text annotation
Not in a motif group
homologous
IL_4LFB_047
IL_95997.1
IL_5V8I_1581/1a/1124:1127,
1/1a/1145:1149
Minor groove platform
Not in a motif group
homologous
IL_6CZR_158
IL_58103.6
IL_5V8I_1591/1a/1129:1132,
1/1a/1142:1143
Minor groove platform
Not in a motif group
homologous
IL_4LFB_049
IL_15052.1
IL_5V8I_1601/1a/1247:1253,
1/1a/1284:1290
No text annotation
Not in a motif group
homologous
IL_4LFB_051
IL_09129.1
IL_5V8I_1611/1a/1255:1258,
1/1a/1277:1282
No text annotation
Not in a motif group
homologous
IL_6CZR_161
IL_75461.4
IL_5V8I_1621/1a/1259:1260,
1/1a/1274:1276
Not an internal loop
Not in a motif group
homologous
IL_4LFB_053
IL_93353.1
IL_5V8I_1631/1a/1260:1262,
1/1a/1273:1274
Minor groove platform
Not in a motif group
geometric
IL_4LFB_054
IL_93353.1
IL_5V8I_1641/1a/1303:1308,
1/1a/1329:1334
No text annotation
Not in a motif group
homologous
IL_4LFB_055
IL_19954.2
IL_5V8I_1651/1a/1399:1401,
1/1a/1501:1504
No text annotation
Not in a motif group
homologous
IL_5J7L_058
IL_36143.3
IL_5V8I_1661/1a/1401:1405,
1/1a/1496:1501
No text annotation
Not in a motif group
IL_5V8I_1671/1a/1405:1409,
1/1a/1491:1496
Other IL
Not in a motif group
geometric
IL_4WF9_084
IL_05145.2
IL_5V8I_1681/1a/1412:1415,
1/1a/1485:1488
Tandem non-canonical cWW pairs
Not in a motif group
homologous
IL_6CZR_168
IL_67743.1
IL_5V8I_1691/1a/1416:1419,
1/1a/1481:1484
Double sheared
Not in a motif group
homologous
IL_5J7L_062
IL_09705.9
IL_5V8I_1701/1a/1431:1435,
1/1a/1466:1469
UAA/GAN variation
Not in a motif group
geometric
IL_4LFB_062
IL_07235.1
IL_5V8I_1711/1a/1435:1437,
1/1a/1464:1466
No text annotation
Not in a motif group
homologous
IL_4LFB_063
IL_95997.1
IL_5V8I_1721/1a/1440:1443,
1/1a/1459:1461
Isolated basepair with bulged bases
Not in a motif group
homologous
IL_6CZR_172
IL_92788.2
IL_5V8I_1731/2A/24:30,
1/2A/510:516
Triple sheared with non-canonical cWW
Not in a motif group
homologous
IL_7RQB_001
IL_66414.6
IL_5V8I_1741/2A/36:37,
1/2A/442:444
Single bulged A
Not in a motif group
homologous
IL_7RQB_002
IL_37497.2
IL_5V8I_1751/2A/42:44,
1/2A/433:436
Major groove platform with extra cWW
Not in a motif group
geometric
IL_3PDR_004
IL_18471.2
IL_5V8I_1761/2A/81:85,
1/2A/97:105
Kink-turn
Not in a motif group
homologous
IL_7RQB_004
IL_45067.2
IL_5V8I_1771/2A/183:184,
1/2A/212:214
Single stack bend
Not in a motif group
homologous
IL_7RQB_005
IL_76488.2
IL_5V8I_1781/2A/188:194,
1/2A/201:208
8x7 Sarcin-Ricin; G-bulge
Not in a motif group
homologous
IL_7RQB_006
IL_04346.7
IL_5V8I_1791/2A/239:245,
1/2A/253:258
7x6 Sarcin-Ricin; G-bulge
Not in a motif group
homologous
IL_7RQB_007
IL_76042.2
IL_5V8I_1801/2A/272D:272E,
1/2A/363E:364
Major groove platform
Not in a motif group
homologous
IL_7RQB_009
IL_27635.1
IL_5V8I_1811/2A/272J:279,
1/2A/361:363
No text annotation
Not in a motif group
IL_5V8I_1821/2A/280:284,
1/2A/357:360
tSH-tHW
Not in a motif group
homologous
IL_7RQB_011
IL_04059.1
IL_5V8I_1831/2A/288:290,
1/2A/350:353
Isolated tHS basepair with bulges
Not in a motif group
homologous
IL_7RQB_012
IL_38958.7
IL_5V8I_1841/2A/293:295,
1/2A/343:347
No text annotation
Not in a motif group
homologous
IL_7RQB_013
IL_69440.1
IL_5V8I_1851/2A/481:484,
1/2A/496:509
No text annotation
Not in a motif group
homologous
IL_7RQB_014
IL_60992.6
IL_5V8I_1861/2A/564:566,
1/2A/575:577
No text annotation
Not in a motif group
homologous
IL_7RQB_015
IL_95997.1
IL_5V8I_1871/2A/606:610,
1/2A/618:622
AAA cross-strand stack
Not in a motif group
homologous
IL_7RQB_016
IL_17136.1
IL_5V8I_1881/2A/672:674,
1/2A/806:808
No text annotation
Not in a motif group
homologous
IL_5J7L_259
IL_95997.1
IL_5V8I_1891/2A/674:678,
1/2A/799:806
No text annotation
Not in a motif group
geometric
IL_7RQB_018
IL_17470.6
IL_5V8I_1901/2A/697:698,
1/2A/763:765
Single bulged A
Not in a motif group
geometric
IL_7RQB_019
IL_37497.2
IL_5V8I_1911/2A/702:703,
1/2A/728:730
Single bulged G
Not in a motif group
homologous
IL_7RQB_020
IL_00225.2
IL_5V8I_1921/2A/703:707,
1/2A/724:728
Triple sheared
Not in a motif group
geometric
IL_7RQB_021
IL_56467.8
IL_5V8I_1931/2A/738:741,
1/2A/756:758
Major groove platform with extra cWW
Not in a motif group
homologous
IL_7RQB_022
IL_05564.2
IL_5V8I_1941/2A/775:777,
1/2A/787:791
Multiple bulged bases
Not in a motif group
geometric
IL_7RQB_023
IL_90991.6
IL_5V8I_1951/2A/837:838,
1/2A/940:942
Single stack bend
Not in a motif group
homologous
IL_7RQB_024
IL_92001.1
IL_5V8I_1961/2A/844:846,
1/2A/931:934
Intercalated cWW
Not in a motif group
geometric
IL_7RQB_025
IL_52767.2
IL_5V8I_1971/2A/846:850,
1/2A/927:931
No text annotation
Not in a motif group
homologous
IL_7RQB_026
IL_94165.1
IL_5V8I_1981/2A/858:862,
1/2A/915:919
5x5 Sarcin-Ricin with intercalated A; G-bulge
Not in a motif group
geometric
IL_7RQB_027
IL_38862.1
IL_5V8I_1991/2A/862:863,
1/2A/913:915
Minor groove platform
Not in a motif group
homologous
IL_7RQB_028
IL_42622.2
IL_5V8I_2001/2A/864:868,
1/2A/909:912
C-loop
Not in a motif group
homologous
IL_7RQB_029
IL_02509.1
IL_5V8I_2011/2A/870:872,
1/2A/905:907
Isolated cWS basepair
Not in a motif group
homologous
IL_7RQB_030
IL_52767.2
IL_5V8I_2021/2A/875:877,
1/2A/899:902
Minor groove platform with extra cWW
Not in a motif group
geometric
IL_7RQB_031
IL_46796.1
IL_5V8I_2031/2A/877:879,
1/2A/898:899
Minor groove platform
Not in a motif group
homologous
IL_7RQB_032
IL_93353.1
IL_5V8I_2041/2A/880:881,
1/2A/895:897
Single bulged A
Not in a motif group
homologous
IL_7RQB_033
IL_37497.2
IL_5V8I_2051/2A/952:954,
1/2A/963:965
No text annotation
Not in a motif group
homologous
IL_7RQB_034
IL_95997.1
IL_5V8I_2061/2A/994:996,
1/2A/1159:1160
Single bulged C
Not in a motif group
homologous
IL_5J7L_276
IL_61258.12
IL_5V8I_2071/2A/998:1002,
1/2A/1153:1157
UAA/GAN
Not in a motif group
homologous
IL_7RQB_036
IL_89002.2
IL_5V8I_2081/2A/1004:1011,
1/2A/1150:1151
SSU/LSU pseudoknot
Not in a motif group
geometric
IL_7RQB_037
IL_15861.7
IL_5V8I_2091/2A/1011:1013,
1/2A/1149:1150
Single bulged U
Not in a motif group
homologous
IL_7RQB_038
IL_83039.13
IL_5V8I_2101/2A/1018:1024,
1/2A/1140:1144
No text annotation
Not in a motif group
homologous
IL_7RQB_039
IL_57188.3
IL_5V8I_2111/2A/1024:1030,
1/2A/1124:1140
No text annotation
Not in a motif group
geometric
IL_7RQB_040
IL_50715.1
IL_5V8I_2121/2A/1031:1034,
1/2A/1121:1123
Isolated non-canonical cWW with bulges
Not in a motif group
homologous
IL_7RQB_041
IL_82068.2
IL_5V8I_2131/2A/1043:1053,
1/2A/1106:1112
No text annotation
Not in a motif group
IL_5V8I_2151/2A/1196:1198,
1/2A/1247:1250
Isolated cWS basepair
Not in a motif group
homologous
IL_7RQB_045
IL_52767.2
IL_5V8I_2161/2A/1202:1206,
1/2A/1240:1243
No text annotation
Not in a motif group
homologous
IL_7RQB_046
IL_68574.2
IL_5V8I_2171/2A/1208:1215,
1/2A/1234:1238
Kink-turn
Not in a motif group
homologous
IL_7RQB_047
IL_70923.2
IL_5V8I_2181/2A/1219:1221,
1/2A/1229:1230
Single bulged A
Not in a motif group
homologous
IL_7RQB_048
IL_37497.2
IL_5V8I_2191/2A/1262:1269,
1/2A/2011:2017
8x7 Sarcin-Ricin; G-bulge
Not in a motif group
homologous
IL_7RQB_049
IL_04346.7
IL_5V8I_2201/2A/1310:1313,
1/2A/1603:1604
Major groove platform; stack outside cWW
Not in a motif group
homologous
IL_7RQB_050
IL_50694.2
IL_5V8I_2211/2A/1319:1323,
1/2A/1331:1333
C-loop
Not in a motif group
homologous
IL_7RQB_051
IL_63596.6
IL_5V8I_2221/2A/1351:1355,
1/2A/1376:1380
UAA/GAN
Not in a motif group
homologous
IL_7RQB_052
IL_89002.2
IL_5V8I_2231/2A/1357:1361,
1/2A/1370:1374
tSH-tHW-tHS
Not in a motif group
homologous
IL_7RQB_053
IL_17136.1
IL_5V8I_2241/2A/1415:1416,
1/2A/1582:1587
No text annotation
Not in a motif group
homologous
IL_7RQB_054
IL_67474.4
IL_5V8I_2251/2A/1417:1421,
1/2A/1577:1581
UAA/GAN
Not in a motif group
homologous
IL_7RQB_055
IL_89002.2
IL_5V8I_2261/2A/1433:1435,
1/2A/1557:1560
Isolated tWW turn
Not in a motif group
homologous
IL_7RQB_056
IL_54997.7
IL_5V8I_2271/2A/1437:1440,
1/2A/1551:1555
tSH-tHW
Not in a motif group
homologous
IL_7RQB_057
IL_04059.1
IL_5V8I_2281/2A/1448:1450,
1/2A/1462:1463
Single stack bend
Not in a motif group
homologous
IL_7RQB_058
IL_76488.2
IL_5V8I_2291/2A/1450A:1451,
1/2A/1459:1461
Single bulged A
Not in a motif group
geometric
IL_7RQB_059
IL_37497.2
IL_5V8I_2301/2A/1469:1473,
1/2A/1518:1523
UAA/GAN
Not in a motif group
homologous
IL_7RQB_060
IL_07235.1
IL_5V8I_2311/2A/1481:1482,
1/2A/1506:1510
No text annotation
Not in a motif group
homologous
IL_7RQB_061
IL_52493.1
IL_5V8I_2321/2A/1489:1491,
1/2A/1499:1500
Single bulged A
Not in a motif group
homologous
IL_7RQB_062
IL_37497.2
IL_5V8I_2331/2A/1526:1529,
1/2A/1540:1546
No text annotation
Not in a motif group
homologous
IL_7RQB_063
IL_02656.1
IL_5V8I_2341/2A/1651:1656,
1/2A/2004:2006
No text annotation
Not in a motif group
homologous
IL_5J7L_304
IL_12566.2
IL_5V8I_2351/2A/1663:1665,
1/2A/1995:1997
Isolated tWW turn
Not in a motif group
homologous
IL_7RQB_065
IL_54997.7
IL_5V8I_2361/2A/1666:1669,
1/2A/1993:1994
Major groove platform; stack outside cWW
Not in a motif group
homologous
IL_7RQB_066
IL_50694.2
IL_5V8I_2371/2A/1669:1674,
1/2A/1990:1993
Intercalated tWH
Not in a motif group
geometric
IL_7RQB_067
IL_82842.2
IL_5V8I_2381/2A/1686:1691,
1/2A/1696:1702
tSH-tSH-tHH-tHS
Not in a motif group
geometric
IL_7RQB_068
IL_65969.2
IL_5V8I_2391/2A/1770:1771,
1/2A/1980:1982
Single bulged A
Not in a motif group
homologous
IL_7RQB_069
IL_37497.2
IL_5V8I_2401/2A/1798:1804,
1/2A/1813:1821
Kink-turn related
Not in a motif group
homologous
IL_7RQB_070
IL_17069.3
IL_5V8I_2411/2A/1837:1840,
1/2A/1902:1903
Major groove outside cWW, minor groove, intercalation pocket
Not in a motif group
homologous
IL_7RQB_071
IL_88739.1
IL_5V8I_2421/2A/1841:1842,
1/2A/1898:1901
Major groove outside cWW, minor groove, intercalation pocket
Not in a motif group
homologous
IL_7RQB_072
IL_16396.2
IL_5V8I_2431/2A/1846:1849,
1/2A/1893:1894
Minor groove platform
Not in a motif group
homologous
IL_7RQB_073
IL_88739.1
IL_5V8I_2441/2A/1851:1855,
1/2A/1887:1891
UAA/GAN with extra pair
Not in a motif group
homologous
IL_7RQB_074
IL_90318.1
IL_5V8I_2451/2A/1856:1860,
1/2A/1882:1886
Triple sheared
Not in a motif group
homologous
IL_7RQB_075
IL_56467.8
IL_5V8I_2461/2A/1933:1934,
1/2A/1964:1967
Multiple bulged bases
Not in a motif group
geometric
IL_7RQB_076
IL_59677.2
IL_5V8I_2471/2A/1934:1945,
1/2A/1961:1964
No text annotation
Not in a motif group
homologous
IL_7RQB_077
NA
IL_5V8I_2481/2A/2050:2052,
1/2A/2617:2618
Major groove platform
Not in a motif group
homologous
IL_5J7L_320
IL_27635.1
IL_5V8I_2491/2A/2054:2057,
1/2A/2611:2615
No text annotation
Not in a motif group
IL_5V8I_2501/2A/2067:2069,
1/2A/2442:2443
Single bulged U
Not in a motif group
homologous
IL_7RQB_080
IL_83039.13
IL_5V8I_2511/2A/2070:2071,
1/2A/2438:2441
Minor groove platform
Not in a motif group
homologous
IL_7RQB_081
IL_42622.2
IL_5V8I_2521/2A/2081:2083,
1/2A/2236:2239
Isolated tHS basepair with bulges
Not in a motif group
homologous
IL_7RQB_082
IL_38958.7
IL_5V8I_2531/2A/2085:2087,
1/2A/2232:2234
No text annotation
Not in a motif group
homologous
IL_7RQB_083
IL_95997.1
IL_5V8I_2581/2A/2297:2299,
1/2A/2317:2321
Isolated tHS basepair with bulges
Not in a motif group
homologous
IL_7RQB_088
IL_38958.7
IL_5V8I_2591/2A/2350:2353,
1/2A/2364:2367
Double sheared
Not in a motif group
homologous
IL_7RQB_089
IL_09705.9
IL_5V8I_2601/2A/2401:2403,
1/2A/2414:2415
Major groove platform
Not in a motif group
homologous
IL_7RQB_090
IL_27635.1
IL_5V8I_2611/2A/2453:2454,
1/2A/2498:2500
Single stack bend
Not in a motif group
geometric
IL_7RQB_091
IL_76488.2
IL_5V8I_2621/2A/2454:2455,
1/2A/2496:2498
Major groove platform
Not in a motif group
homologous
IL_7RQB_092
IL_27635.1
IL_5V8I_2631/2A/2457:2459,
1/2A/2493:2494
Major groove platform
Not in a motif group
geometric
IL_3OXE_003
IL_27635.1
IL_5V8I_2641/2A/2459:2461,
1/2A/2489:2493
Major groove minor groove platform with extra cWW
Not in a motif group
homologous
IL_7RQB_094
IL_92788.2
IL_5V8I_2651/2A/2466:2470,
1/2A/2480:2484
Triple sheared
Not in a motif group
homologous
IL_7RQB_095
IL_56467.8
IL_5V8I_2661/2A/2507:2508,
1/2A/2580:2582
Major groove platform
Not in a motif group
homologous
IL_7A0S_088
IL_76223.2
IL_5V8I_2671/2A/2510:2512,
1/2A/2574:2578
Isolated non-canonical cWW with bulges
Not in a motif group
homologous
IL_7RQB_097
IL_90933.2
IL_5V8I_2681/2A/2512:2513,
1/2A/2571:2574
Multiple bulged bases
Not in a motif group
geometric
IL_7RQB_098
IL_71530.2
IL_5V8I_2691/2A/2522:2523,
1/2A/2540:2543
Minor groove platform with intercalation
Not in a motif group
homologous
IL_7RQB_099
IL_95601.3
IL_5V8I_2701/2A/2588:2590,
1/2A/2604:2606
No text annotation
Not in a motif group
homologous
IL_7RQB_100
NA
IL_5V8I_2711/2A/2591:2592,
1/2A/2601:2603
Single bulged A
Not in a motif group
geometric
IL_4V9F_090
IL_37497.2
IL_5V8I_2721/2A/2636:2640,
1/2A/2774:2782
tSH-tHS-tHW
Not in a motif group
homologous
IL_7RQB_102
IL_04638.1
IL_5V8I_2731/2A/2652:2658,
1/2A/2663:2668
Sarcin-Ricin target in LSU H95; G-bulge
Not in a motif group
homologous
IL_7RQB_103
IL_16458.1
IL_5V8I_2741/2A/2680:2684,
1/2A/2725:2727
C-loop
Not in a motif group
homologous
IL_7RQB_104
IL_63596.6
IL_5V8I_2751/2A/2687:2691,
1/2A/2718:2722
No text annotation
Not in a motif group
homologous
IL_7RQB_105
IL_08296.3
IL_5V8I_2761/2A/2695:2696,
1/2A/2711:2714
Multiple bulged bases
Not in a motif group
homologous
IL_7A0S_097
IL_71530.2
IL_5V8I_2771/2A/2737:2742,
1/2A/2762:2767
UAA/GAN with extra cWW
Not in a motif group
homologous
IL_7RQB_107
IL_49767.5
IL_5V8I_2781/2A/2838:2839,
1/2A/2878:2880
Single bulged C
Not in a motif group
homologous
IL_7RQB_108
IL_61258.12
IL_5V8I_2791/2A/2843:2846,
1/2A/2870:2874
No text annotation
Not in a motif group
homologous
IL_7RQB_109
IL_58764.3
IL_5V8I_2801/2A/2847:2852,
1/2A/2865:2869
No text annotation
Not in a motif group
homologous
IL_7RQB_110
IL_83162.5
IL_5V8I_2811/2B/17:18,
1/2B/65:67
Major groove intercalation
Not in a motif group
homologous
IL_7RQB_111
IL_37497.2
IL_5V8I_2821/2B/23:28,
1/2B/56:60
No text annotation
Not in a motif group
homologous
IL_7RQB_112
NA
IL_5V8I_2831/2B/30:31,
1/2B/51:54
Major groove minor groove platform; mini C-loop
Not in a motif group
homologous
IL_7RQB_113
IL_09061.6
IL_5V8I_2841/2B/34:38,
1/2B/44:48
Symmetric double minor groove platform
Not in a motif group
geometric
IL_7RQB_114
IL_58103.6
IL_5V8I_2851/2B/71:79,
1/2B/98:106
Bacterial 5S Loop E
Not in a motif group
homologous
IL_7RQB_115
IL_56455.3
IL_5V8I_2861/2a/30:32,
1/2a/552:553
Single bulged G
Not in a motif group
homologous
IL_5J7L_001
IL_00225.2
IL_5V8I_2871/2a/44:45,
1/2a/396:398
Single bulged A
Not in a motif group
homologous
IL_4LFB_002
IL_37497.2
IL_5V8I_2881/2a/47:52,
1/2a/359:361
No text annotation
Not in a motif group
geometric
IL_4LFB_003
IL_11178.1
IL_5V8I_2891/2a/54:56,
1/2a/356:357
Minor groove platform
Not in a motif group
homologous
IL_4LFB_004
IL_93353.1
IL_5V8I_2901/2a/63:66,
1/2a/103:104
Multiple bulged bases
Not in a motif group
homologous
IL_6CZR_117
IL_76389.1
IL_5V8I_2911/2a/67:69,
1/2a/100:102
No text annotation
Not in a motif group
homologous
IL_4LFB_006
IL_95997.1
IL_5V8I_2921/2a/129:131,
1/2a/231:232
Multiple bulged bases
Not in a motif group
homologous
IL_4LFB_007
IL_16396.2
IL_5V8I_2931/2a/132:136,
1/2a/227:230
No text annotation
Not in a motif group
homologous
IL_4LFB_008
IL_58764.3
IL_5V8I_2941/2a/148:153,
1/2a/168:174
tWH-tWH-tHW-tHW
Not in a motif group
homologous
IL_4LFB_009
IL_39753.1
IL_5V8I_2951/2a/186:188,
1/2a/189L:191
No text annotation
Not in a motif group
homologous
IL_4LFB_010
IL_95997.1
IL_5V8I_2961/2a/242:247,
1/2a/277:284
Kink-turn with non-sequential stacking
Not in a motif group
homologous
IL_4LFB_011
IL_45067.2
IL_5V8I_2971/2a/249:252,
1/2a/274:275
No text annotation
Not in a motif group
homologous
IL_4LFB_012
IL_48100.2
IL_5V8I_2981/2a/292:293,
1/2a/304:308
C-loop
Not in a motif group
homologous
IL_4LFB_013
IL_37712.2
IL_5V8I_2991/2a/367:369,
1/2a/392:393
Single bulged U
Not in a motif group
geometric
IL_4LFB_014
IL_83039.13
IL_5V8I_3001/2a/371:375,
1/2a/389:390
C-loop
Not in a motif group
homologous
IL_5J7L_018
IL_75255.1
IL_5V8I_3011/2a/375:376,
1/2a/387:389
Single bulged G
Not in a motif group
geometric
IL_5J7L_019
IL_00225.2
IL_5V8I_3021/2a/409:416,
1/2a/427:433
No text annotation
Not in a motif group
homologous
IL_4LFB_017
IL_28026.1
IL_5V8I_3031/2a/446:450,
1/2a/483:488
6x5 Sarcin-Ricin; G-bulge
Not in a motif group
homologous
IL_4LFB_018
IL_88269.3
IL_5V8I_3041/2a/450:455,
1/2a/476:483
No text annotation
Not in a motif group
geometric
IL_4LFB_019
IL_11882.1
IL_5V8I_3051/2a/504:511,
1/2a/540:541
SSU/LSU pseudoknot
Not in a motif group
homologous
IL_4LFB_020
IL_15861.7
IL_5V8I_3061/2a/515:521,
1/2a/528:536
No text annotation
Not in a motif group
homologous
IL_4LFB_021
NA
IL_5V8I_3071/2a/569:575,
1/2a/880:881
No text annotation
Not in a motif group
homologous
IL_4LFB_022
IL_69996.1
IL_5V8I_3081/2a/580:584,
1/2a/757:761
tSH-tHW-tHS
Not in a motif group
homologous
IL_4LFB_023
IL_17136.1
IL_5V8I_3091/2a/594:596,
1/2a/644:645
Major groove platform
Not in a motif group
homologous
IL_4LFB_024
IL_27635.1
IL_5V8I_3101/2a/597:598,
1/2a/640:643
Major groove minor groove platform; mini C-loop
Not in a motif group
homologous
IL_5J7L_029
IL_09061.6
IL_5V8I_3111/2a/605:612,
1/2a/628:633
No text annotation
Not in a motif group
homologous
IL_4LFB_026
IL_78349.1
IL_5V8I_3121/2a/654:655,
1/2a/751:754
Major groove platform; stack outside cWW
Not in a motif group
geometric
IL_4LFB_027
IL_50694.2
IL_5V8I_3131/2a/657:658,
1/2a/747:749
Major groove platform
Not in a motif group
homologous
IL_4LFB_028
IL_27635.1
IL_5V8I_3141/2a/662:666,
1/2a/740:743
Tandem non-canonical cWW pairs
Not in a motif group
homologous
IL_4LFB_029
IL_71110.1
IL_5V8I_3151/2a/673:678,
1/2a/712:717
No text annotation
Not in a motif group
geometric
IL_4LFB_030
IL_04668.1
IL_5V8I_3161/2a/683:688,
1/2a/699:707
No text annotation
Not in a motif group
homologous
IL_6CZR_143
IL_37722.1
IL_5V8I_3171/2a/774:778,
1/2a/804:805
Left turn
Not in a motif group
homologous
IL_4LFB_032
IL_29346.1
IL_5V8I_3181/2a/779:783,
1/2a/799:803
tSH-tHW-tHS
Not in a motif group
homologous
IL_5J7L_037
IL_17136.1
IL_5V8I_3191/2a/887:894,
1/2a/905:910
8x6 Sarcin-Ricin with inserted Y; G-bulge
Not in a motif group
homologous
IL_4LFB_034
IL_24606.2
IL_5V8I_3201/2a/922:923,
1/2a/1393:1395
Single bulged A
Not in a motif group
homologous
IL_4LFB_035
IL_37497.2
IL_5V8I_3211/2a/925:927,
1/2a/1390:1391
Single bulged G
Not in a motif group
homologous
IL_4LFB_036
IL_00225.2
IL_5V8I_3221/2a/933:935,
1/2a/1380:1384
Minor groove platform
Not in a motif group
homologous
IL_5J7L_041
IL_47078.1
IL_5V8I_3231/2a/953:954,
1/2a/1226:1228
Minor groove platform
Not in a motif group
homologous
IL_4LFB_038
IL_42622.2
IL_5V8I_3241/2a/993:997,
1/2a/1044:1045
Minor groove platform
Not in a motif group
geometric
IL_4LFB_039
IL_47078.1
IL_5V8I_3251/2a/1048:1050,
1/2a/1208:1209
Single bulged U
Not in a motif group
geometric
IL_4LFB_042
IL_83039.13
IL_5V8I_3261/2a/1050:1052,
1/2a/1206:1208
No text annotation
Not in a motif group
homologous
IL_4LFB_043
NA
IL_5V8I_3271/2a/1052:1056,
1/2a/1204:1206
Isolated cWS basepair
Not in a motif group
geometric
IL_4LFB_044
IL_76319.2
IL_5V8I_3281/2a/1057:1058,
1/2a/1199:1203
Minor groove platform
Not in a motif group
homologous
IL_5J7L_048
IL_93353.1
IL_5V8I_3291/2a/1060:1061,
1/2a/1195:1197
Single bulged U
Not in a motif group
geometric
IL_4LFB_046
IL_83039.13
IL_5V8I_3301/2a/1061:1063,
1/2a/1193:1195
No text annotation
Not in a motif group
homologous
IL_4LFB_047
IL_95997.1
IL_5V8I_3311/2a/1124:1127,
1/2a/1145:1149
Minor groove platform
Not in a motif group
homologous
IL_6CZR_158
IL_58103.6
IL_5V8I_3321/2a/1129:1132,
1/2a/1142:1143
Minor groove platform
Not in a motif group
homologous
IL_4LFB_049
IL_15052.1
IL_5V8I_3331/2a/1158:1161,
1/2a/1175:1181
No text annotation
Not in a motif group
homologous
IL_5J7L_053
IL_42032.1
IL_5V8I_3341/2a/1247:1253,
1/2a/1284:1290
No text annotation
Not in a motif group
homologous
IL_4LFB_051
IL_09129.1
IL_5V8I_3351/2a/1255:1258,
1/2a/1277:1282
No text annotation
Not in a motif group
homologous
IL_4LFB_052
IL_84205.1
IL_5V8I_3361/2a/1259:1262,
1/2a/1273:1276
Double sheared
Not in a motif group
geometric
IL_5J7L_256
IL_09705.9
IL_5V8I_3371/2a/1303:1308,
1/2a/1329:1334
No text annotation
Not in a motif group
homologous
IL_4LFB_055
IL_19954.2
IL_5V8I_3381/2a/1399:1401,
1/2a/1501:1504
No text annotation
Not in a motif group
geometric
IL_5J7L_058
IL_36143.3
IL_5V8I_3391/2a/1401:1405,
1/2a/1496:1501
No text annotation
Not in a motif group
homologous
IL_4LFB_057
NA
IL_5V8I_3401/2a/1405:1409,
1/2a/1491:1496
No text annotation
Not in a motif group
IL_5V8I_3411/2a/1412:1415,
1/2a/1485:1488
Tandem non-canonical cWW pairs
Not in a motif group
homologous
IL_6CZR_168
IL_67743.1
IL_5V8I_3421/2a/1416:1419,
1/2a/1481:1484
Double sheared
Not in a motif group
homologous
IL_5J7L_062
IL_09705.9
IL_5V8I_3431/2a/1431:1435,
1/2a/1466:1469
UAA/GAN variation
Not in a motif group
geometric
IL_4LFB_062
IL_07235.1
IL_5V8I_3441/2a/1435:1437,
1/2a/1464:1466
No text annotation
Not in a motif group
homologous
IL_4LFB_063
IL_95997.1
IL_5V8I_3451/2a/1440:1443,
1/2a/1459:1461
Isolated basepair with bulged bases
Not in a motif group
homologous
IL_6CZR_172
IL_92788.2

Problematic loops

#loop idProblemSequence
IL_5V8I_009No text annotation
IL_5V8I_081No text annotation
IL_5V8I_083No text annotation
IL_5V8I_214No text annotation
IL_5V8I_254No text annotation
IL_5V8I_255No text annotation
IL_5V8I_256No text annotation
IL_5V8I_257No text annotation

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
J3_5V8I_0011/1A/30:31,
1/1A/474:481,
1/1A/509:510
No text annotation
Not in a motif group
J3_5V8I_0021/1A/56:57,
1/1A/70:76,
1/1A/110:114
No text annotation
Not in a motif group
homologous
J3_7RQB_002
NA
J3_5V8I_0031/1A/269:271B,
1/1A/271V:272B,
1/1A/366:370
No text annotation
Not in a motif group
homologous
J3_7RQB_003
NA
J3_5V8I_0041/1A/683:689,
1/1A/773:775,
1/1A/791:794
No text annotation
Not in a motif group
homologous
J3_7RQB_004
NA
J3_5V8I_0051/1A/698:700,
1/1A/732:736,
1/1A/760:763
No text annotation
Not in a motif group
J3_5V8I_0061/1A/1055:1058,
1/1A/1080:1087,
1/1A/1102:1104
No text annotation
Not in a motif group
J3_5V8I_0071/1A/1298:1303,
1/1A/1625:1627,
1/1A/1639:1642
No text annotation
Not in a motif group
homologous
J3_7RQB_007
NA
J3_5V8I_0081/1A/1306:1309,
1/1A/1605:1611,
1/1A/1620:1622
No text annotation
Not in a motif group
homologous
J3_7RQB_008
NA
J3_5V8I_0091/1A/1344:1350,
1/1A/1381:1385,
1/1A/1402:1403
No text annotation
Not in a motif group
homologous
J3_7RQB_009
NA
J3_5V8I_0101/1A/2091:2093,
1/1A/2196:2200,
1/1A/2223:2228
No text annotation
Not in a motif group
homologous
J3_7RQB_010
NA
J3_5V8I_0111/1A/2295:2297,
1/1A/2321:2323,
1/1A/2332:2337
No text annotation
Not in a motif group
homologous
J3_7RQB_011
NA
J3_5V8I_0121/1A/2517:2520,
1/1A/2545:2547,
1/1A/2561:2567
No text annotation
Not in a motif group
homologous
J3_7RQB_012
NA
J3_5V8I_0131/1A/2814:2815,
1/1A/2831:2836,
1/1A/2882:2886
No text annotation
Not in a motif group
J3_5V8I_0141/1B/11:16,
1/1B/68:69,
1/1B/108:110
No text annotation
Not in a motif group
homologous
J3_7RQB_015
NA
J3_5V8I_0151/1a/46:47,
1/1a/361:367,
1/1a/393:395
No text annotation
Not in a motif group
J3_5V8I_0161/1a/586:588,
1/1a/651:654,
1/1a/754:755
No text annotation
Not in a motif group
J3_5V8I_0171/1a/672:673,
1/1a/717:725,
1/1a/732:734
No text annotation
Not in a motif group
J3_5V8I_0181/1a/826:829,
1/1a/857:861,
1/1a/868:874
No text annotation
Not in a motif group
homologous
J3_4LFB_001
NA
J3_5V8I_0191/1a/936:939,
1/1a/1344:1350,
1/1a/1372:1379
No text annotation
Not in a motif group
homologous
J3_4LFB_002
NA
J3_5V8I_0201/1a/943:946,
1/1a/1235:1237,
1/1a/1337:1340
No text annotation
Not in a motif group
homologous
J3_4LFB_003
NA
J3_5V8I_0211/1a/955:962,
1/1a/973:984,
1/1a/1221:1225
No text annotation
Not in a motif group
J3_5V8I_0221/1a/990:993,
1/1a/1045:1047,
1/1a/1210:1215
No text annotation
Not in a motif group
homologous
J3_4LFB_005
NA
J3_5V8I_0231/1a/1002:1006,
1/1a/1023:1027,
1/1a/1034:1038
No text annotation
Not in a motif group
J3_5V8I_0241/1a/1063:1068,
1/1a/1107:1113,
1/1a/1187:1193
No text annotation
Not in a motif group
J3_5V8I_0251/1a/1073:1074,
1/1a/1083:1087,
1/1a/1098:1102
No text annotation
Not in a motif group
homologous
J3_5J7L_009
NA
J3_5V8I_0261/1a/1116:1118,
1/1a/1155:1161,
1/1a/1175:1184
No text annotation
Not in a motif group
J3_5V8I_0271/1a/1237:1241,
1/1a/1296:1303,
1/1a/1334:1337
No text annotation
Not in a motif group
J3_5V8I_0281/2A/30:31,
1/2A/474:481,
1/2A/509:510
No text annotation
Not in a motif group
J3_5V8I_0291/2A/56:57,
1/2A/70:76,
1/2A/110:114
No text annotation
Not in a motif group
homologous
J3_7RQB_002
NA
J3_5V8I_0301/2A/269:271B,
1/2A/271V:272B,
1/2A/366:370
No text annotation
Not in a motif group
homologous
J3_7RQB_003
NA
J3_5V8I_0311/2A/683:689,
1/2A/773:775,
1/2A/791:794
No text annotation
Not in a motif group
homologous
J3_7RQB_004
NA
J3_5V8I_0321/2A/698:700,
1/2A/732:736,
1/2A/760:763
No text annotation
Not in a motif group
homologous
J3_7RQB_005
NA
J3_5V8I_0331/2A/1055:1057,
1/2A/1081:1091,
1/2A/1100:1104
No text annotation
Not in a motif group
J3_5V8I_0341/2A/1298:1303,
1/2A/1625:1627,
1/2A/1639:1642
No text annotation
Not in a motif group
homologous
J3_7RQB_007
NA
J3_5V8I_0351/2A/1306:1309,
1/2A/1605:1611,
1/2A/1620:1622
No text annotation
Not in a motif group
homologous
J3_7RQB_008
NA
J3_5V8I_0361/2A/1344:1350,
1/2A/1381:1385,
1/2A/1402:1403
No text annotation
Not in a motif group
homologous
J3_7RQB_009
NA
J3_5V8I_0371/2A/2091:2093,
1/2A/2196:2200,
1/2A/2223:2228
No text annotation
Not in a motif group
homologous
J3_7RQB_010
NA
J3_5V8I_0381/2A/2295:2297,
1/2A/2321:2323,
1/2A/2332:2337
No text annotation
Not in a motif group
J3_5V8I_0391/2A/2517:2520,
1/2A/2545:2547,
1/2A/2561:2567
No text annotation
Not in a motif group
J3_5V8I_0401/2A/2814:2815,
1/2A/2831:2836,
1/2A/2882:2886
No text annotation
Not in a motif group
homologous
J3_7RQB_014
NA
J3_5V8I_0411/2B/11:16,
1/2B/68:69,
1/2B/108:110
No text annotation
Not in a motif group
homologous
J3_7RQB_015
NA
J3_5V8I_0421/2a/46:47,
1/2a/361:367,
1/2a/393:395
No text annotation
Not in a motif group
homologous
J3_5J7L_001
NA
J3_5V8I_0431/2a/586:588,
1/2a/651:654,
1/2a/754:755
No text annotation
Not in a motif group
J3_5V8I_0441/2a/672:673,
1/2a/717:725,
1/2a/732:734
No text annotation
Not in a motif group
homologous
J3_5J7L_003
NA
J3_5V8I_0451/2a/826:829,
1/2a/857:861,
1/2a/868:874
No text annotation
Not in a motif group
homologous
J3_4LFB_001
NA
J3_5V8I_0461/2a/936:939,
1/2a/1344:1350,
1/2a/1372:1379
No text annotation
Not in a motif group
homologous
J3_4LFB_002
NA
J3_5V8I_0471/2a/943:946,
1/2a/1235:1237,
1/2a/1337:1340
No text annotation
Not in a motif group
homologous
J3_4LFB_003
NA
J3_5V8I_0481/2a/955:962,
1/2a/973:984,
1/2a/1221:1225
No text annotation
Not in a motif group
J3_5V8I_0491/2a/990:993,
1/2a/1045:1047,
1/2a/1210:1215
No text annotation
Not in a motif group
homologous
J3_4LFB_005
NA
J3_5V8I_0501/2a/1002:1006,
1/2a/1023:1029,
1/2a/1032:1038
No text annotation
Not in a motif group
J3_5V8I_0511/2a/1063:1068,
1/2a/1107:1113,
1/2a/1187:1193
No text annotation
Not in a motif group
J3_5V8I_0521/2a/1073:1074,
1/2a/1083:1087,
1/2a/1098:1102
No text annotation
Not in a motif group
homologous
J3_6CZR_024
NA
J3_5V8I_0531/2a/1116:1118,
1/2a/1155:1158,
1/2a/1181:1184
No text annotation
Not in a motif group
J3_5V8I_0541/2a/1237:1241,
1/2a/1296:1303,
1/2a/1334:1337
No text annotation
Not in a motif group

Problematic loops

No problematic loops


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