Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
HL_5DOX_0011/1A/59:68No text annotation
Not in a motif group
homologous
HL_7RQB_001
HL_99167.2
HL_5DOX_0021/1A/87:95No text annotation
Not in a motif group
homologous
HL_7RQB_002
HL_96598.1
HL_5DOX_0031/1A/123:128No text annotation
Not in a motif group
homologous
HL_7RQB_003
HL_70546.1
HL_5DOX_0041/1A/139:142ANo text annotation
Not in a motif group
homologous
HL_7RQB_004
HL_79921.3
HL_5DOX_0051/1A/194:201No text annotation
Not in a motif group
homologous
HL_5J7L_139
HL_06192.2
HL_5DOX_0061/1A/225:230No text annotation
Not in a motif group
homologous
HL_7RQB_007
HL_02862.2
HL_5DOX_0071/1A/246:252No text annotation
Not in a motif group
homologous
HL_7RQB_008
HL_67216.7
HL_5DOX_0081/1A/271I:271ONo text annotation
Not in a motif group
geometric
HL_5J7L_018
HL_34168.2
HL_5DOX_0091/1A/305:312No text annotation
Not in a motif group
homologous
HL_7RQB_010
HL_41998.1
HL_5DOX_0101/1A/319:323No text annotation
Not in a motif group
homologous
HL_7RQB_011
HL_70546.1
HL_5DOX_0111/1A/327:335No text annotation
Not in a motif group
homologous
HL_7RQB_012
HL_08002.9
HL_5DOX_0121/1A/382:392No text annotation
Not in a motif group
homologous
HL_7RQB_013
HL_91503.4
HL_5DOX_0131/1A/410:417No text annotation
Not in a motif group
homologous
HL_7RQB_014
HL_96598.1
HL_5DOX_0141/1A/462:467GNRA
Not in a motif group
homologous
HL_5J7L_147
HL_35490.2
HL_5DOX_0151/1A/487:493No text annotation
Not in a motif group
homologous
HL_7RQB_016
HL_35490.2
HL_5DOX_0171/1A/566:575No text annotation
Not in a motif group
homologous
HL_7RQB_018
HL_41998.1
HL_5DOX_0181/1A/612:615No text annotation
Not in a motif group
homologous
HL_7RQB_019
HL_32369.1
HL_5DOX_0191/1A/629:634No text annotation
Not in a motif group
homologous
HL_7RQB_020
HL_35490.2
HL_5DOX_0201/1A/641:647No text annotation
Not in a motif group
homologous
HL_7RQB_021
HL_35490.2
HL_5DOX_0221/1A/712:719No text annotation
Not in a motif group
homologous
HL_7RQB_022
HL_84085.2
HL_5DOX_0231/1A/744:753No text annotation
Not in a motif group
homologous
HL_7RQB_023
HL_39334.6
HL_5DOX_0241/1A/779:785No text annotation
Not in a motif group
homologous
HL_5J7L_156
HL_74322.1
HL_5DOX_0251/1A/826:831No text annotation
Not in a motif group
homologous
HL_4WF9_025
HL_53619.1
HL_5DOX_0261/1A/881:895No text annotation
Not in a motif group
HL_5DOX_0271/1A/955:962No text annotation
Not in a motif group
homologous
HL_7RQB_027
HL_35490.2
HL_5DOX_0281/1A/978:985No text annotation
Not in a motif group
homologous
HL_7RQB_028
HL_64430.2
HL_5DOX_0311/1A/1171:1178No text annotation
Not in a motif group
homologous
HL_7RQB_031
HL_94651.3
HL_5DOX_0321/1A/1222:1227No text annotation
Not in a motif group
homologous
HL_7RQB_032
HL_35490.2
HL_5DOX_0331/1A/1281:1289No text annotation
Not in a motif group
homologous
HL_7RQB_033
HL_41998.1
HL_5DOX_0341/1A/1324:1330No text annotation
Not in a motif group
homologous
HL_7RQB_034
HL_46680.1
HL_5DOX_0351/1A/1363:1368No text annotation
Not in a motif group
homologous
HL_7RQB_035
HL_87030.2
HL_5DOX_0361/1A/1389:1398No text annotation
Not in a motif group
homologous
HL_7RQB_036
HL_69023.2
HL_5DOX_0371/1A/1451:1459No text annotation
Not in a motif group
homologous
HL_7RQB_037
HL_32426.1
HL_5DOX_0381/1A/1492:1498No text annotation
Not in a motif group
homologous
HL_7RQB_038
HL_46680.1
HL_5DOX_0391/1A/1565:1568No text annotation
Not in a motif group
homologous
HL_7A0S_039
HL_38927.5
HL_5DOX_0401/1A/1612:1619No text annotation
Not in a motif group
homologous
HL_7RQB_040
HL_64430.2
HL_5DOX_0421/1A/1691:1696No text annotation
Not in a motif group
geometric
HL_7RQB_042
HL_03562.2
HL_5DOX_0431/1A/1720:1742No text annotation
Not in a motif group
homologous
HL_7RQB_043
HL_43656.2
HL_5DOX_0441/1A/1752:1756No text annotation
Not in a motif group
homologous
HL_7RQB_044
HL_76539.5
HL_5DOX_0451/1A/1777:1787No text annotation
Not in a motif group
homologous
HL_7RQB_045
HL_43613.5
HL_5DOX_0461/1A/1806:1811No text annotation
Not in a motif group
homologous
HL_7RQB_046
HL_35490.2
HL_5DOX_0471/1A/1864:1878No text annotation
Not in a motif group
homologous
HL_7RQB_047
HL_35490.2
HL_5DOX_0481/1A/1909:1921No text annotation
Not in a motif group
homologous
HL_7RQB_048
NA
HL_5DOX_0491/1A/1949:1957No text annotation
Not in a motif group
homologous
HL_7RQB_049
HL_51824.1
HL_5DOX_0511/1A/2027:2036No text annotation
Not in a motif group
homologous
HL_7RQB_050
HL_90642.6
HL_5DOX_0531/1A/2205:2219No text annotation
Not in a motif group
homologous
HL_7RQB_052
HL_98426.1
HL_5DOX_0541/1A/2248:2256No text annotation
Not in a motif group
homologous
HL_4WF9_049
HL_53171.2
HL_5DOX_0551/1A/2264:2276No text annotation
Not in a motif group
homologous
HL_7RQB_054
HL_19870.6
HL_5DOX_0561/1A/2303:2313No text annotation
Not in a motif group
homologous
HL_7RQB_055
HL_11805.3
HL_5DOX_0571/1A/2324:2331No text annotation
Not in a motif group
homologous
HL_7RQB_056
HL_12078.4
HL_5DOX_0581/1A/2355:2362No text annotation
Not in a motif group
homologous
HL_7RQB_057
HL_53619.1
HL_5DOX_0591/1A/2374:2379No text annotation
Not in a motif group
homologous
HL_7RQB_058
HL_35490.2
HL_5DOX_0601/1A/2404:2413No text annotation
Not in a motif group
homologous
HL_7RQB_059
HL_40210.2
HL_5DOX_0611/1A/2471:2479No text annotation
Not in a motif group
homologous
HL_7A0S_059
HL_06192.2
HL_5DOX_0621/1A/2528:2535No text annotation
Not in a motif group
homologous
HL_7RQB_061
HL_91104.1
HL_5DOX_0631/1A/2551:2557No text annotation
Not in a motif group
homologous
HL_5J7L_195
NA
HL_5DOX_0641/1A/2594:2599No text annotation
Not in a motif group
homologous
HL_7RQB_063
HL_35490.2
HL_5DOX_0651/1A/2658:2663No text annotation
Not in a motif group
homologous
HL_7RQB_064
HL_35490.2
HL_5DOX_0661/1A/2701:2706No text annotation
Not in a motif group
homologous
HL_7RQB_065
HL_53171.2
HL_5DOX_0671/1A/2745:2759No text annotation
Not in a motif group
homologous
HL_7RQB_066
HL_56677.7
HL_5DOX_0701/1A/2856:2861No text annotation
Not in a motif group
homologous
HL_7RQB_069
HL_35490.2
HL_5DOX_0711/1B/38:44No text annotation
Not in a motif group
homologous
HL_7RQB_070
HL_87939.2
HL_5DOX_0721/1B/86:91No text annotation
Not in a motif group
homologous
HL_7RQB_071
HL_35490.2
HL_5DOX_0731/1a/12:22No text annotation
Not in a motif group
homologous
HL_4LFB_001
HL_89881.2
HL_5DOX_0751/1a/156:165No text annotation
Not in a motif group
HL_5DOX_0761/1a/189C:189HNo text annotation
Not in a motif group
homologous
HL_6CZR_075
HL_61849.1
HL_5DOX_0771/1a/199:218No text annotation
Not in a motif group
geometric
HL_5TBW_015
HL_03345.1
HL_5DOX_0781/1a/258:268No text annotation
Not in a motif group
HL_5DOX_0791/1a/296:301GNRA
Not in a motif group
homologous
HL_4LFB_007
HL_35490.2
HL_5DOX_0801/1a/320:333No text annotation
Not in a motif group
homologous
HL_6CZR_079
HL_81205.2
HL_5DOX_0831/1a/419:424No text annotation
Not in a motif group
homologous
HL_6CZR_082
HL_03562.2
HL_5DOX_0841/1a/458:473No text annotation
Not in a motif group
homologous
HL_4LFB_012
HL_43656.2
HL_5DOX_0851/1a/521:528No text annotation
Not in a motif group
geometric
HL_5NFV_001
HL_76539.5
HL_5DOX_0871/1a/689:698No text annotation
Not in a motif group
homologous
HL_4LFB_015
HL_12326.1
HL_5DOX_0891/1a/786:796No text annotation
Not in a motif group
homologous
HL_4LFB_017
HL_12326.1
HL_5DOX_0901/1a/838:848No text annotation
Not in a motif group
homologous
HL_6CZR_089
HL_53837.2
HL_5DOX_0911/1a/862:867GNRA
Not in a motif group
homologous
HL_5J7L_019
HL_35490.2
HL_5DOX_0921/1a/897:902GNRA
Not in a motif group
homologous
HL_5J7L_020
HL_35490.2
HL_5DOX_0931/1a/963:972No text annotation
Not in a motif group
homologous
HL_4LFB_021
NA
HL_5DOX_0951/1a/1076:1081GNRA
Not in a motif group
homologous
HL_4LFB_024
HL_35490.2
HL_5DOX_0961/1a/1089:1096No text annotation
Not in a motif group
homologous
HL_5J7L_024
HL_71554.2
HL_5DOX_0971/1a/1134:1140No text annotation
Not in a motif group
HL_5DOX_0981/1a/1165:1171GNRA
Not in a motif group
homologous
HL_4LFB_027
HL_35490.2
HL_5DOX_1021/1a/1445:1457No text annotation
Not in a motif group
homologous
HL_6CZR_102
HL_49722.1
HL_5DOX_1031/1a/1515:1520No text annotation
Not in a motif group
homologous
HL_4LFB_032
NA
HL_5DOX_1041/2A/59:68No text annotation
Not in a motif group
homologous
HL_7RQB_001
HL_99167.2
HL_5DOX_1051/2A/87:95No text annotation
Not in a motif group
homologous
HL_7RQB_002
HL_96598.1
HL_5DOX_1061/2A/123:128No text annotation
Not in a motif group
homologous
HL_5J7L_136
HL_70546.1
HL_5DOX_1071/2A/139:142ANo text annotation
Not in a motif group
homologous
HL_7RQB_004
HL_79921.3
HL_5DOX_1091/2A/194:201No text annotation
Not in a motif group
geometric
HL_5J7L_139
HL_06192.2
HL_5DOX_1101/2A/225:230No text annotation
Not in a motif group
homologous
HL_7RQB_007
HL_02862.2
HL_5DOX_1111/2A/246:252No text annotation
Not in a motif group
homologous
HL_7RQB_008
HL_67216.7
HL_5DOX_1121/2A/271I:271ONo text annotation
Not in a motif group
HL_5DOX_1131/2A/305:312No text annotation
Not in a motif group
homologous
HL_7RQB_010
HL_41998.1
HL_5DOX_1141/2A/319:323No text annotation
Not in a motif group
homologous
HL_5J7L_143
HL_70546.1
HL_5DOX_1151/2A/327:335No text annotation
Not in a motif group
homologous
HL_7RQB_012
HL_08002.9
HL_5DOX_1161/2A/382:392No text annotation
Not in a motif group
homologous
HL_7RQB_013
HL_91503.4
HL_5DOX_1171/2A/410:417No text annotation
Not in a motif group
homologous
HL_7RQB_014
HL_96598.1
HL_5DOX_1181/2A/462:467GNRA
Not in a motif group
homologous
HL_5J7L_147
HL_35490.2
HL_5DOX_1191/2A/487:493No text annotation
Not in a motif group
homologous
HL_7RQB_016
HL_35490.2
HL_5DOX_1211/2A/566:575No text annotation
Not in a motif group
geometric
HL_7RQB_018
HL_41998.1
HL_5DOX_1221/2A/612:615No text annotation
Not in a motif group
homologous
HL_7RQB_019
HL_32369.1
HL_5DOX_1231/2A/629:634GNRA
Not in a motif group
homologous
HL_4WF9_020
HL_35490.2
HL_5DOX_1241/2A/641:647No text annotation
Not in a motif group
homologous
HL_7RQB_021
HL_35490.2
HL_5DOX_1261/2A/712:719No text annotation
Not in a motif group
homologous
HL_7RQB_022
HL_84085.2
HL_5DOX_1271/2A/744:753No text annotation
Not in a motif group
homologous
HL_7RQB_023
HL_39334.6
HL_5DOX_1301/2A/882:894No text annotation
Not in a motif group
HL_5DOX_1311/2A/955:962No text annotation
Not in a motif group
homologous
HL_7RQB_027
HL_35490.2
HL_5DOX_1321/2A/978:985No text annotation
Not in a motif group
homologous
HL_7RQB_028
HL_64430.2
HL_5DOX_1361/2A/1222:1227No text annotation
Not in a motif group
homologous
HL_7RQB_032
HL_35490.2
HL_5DOX_1371/2A/1281:1289No text annotation
Not in a motif group
homologous
HL_7RQB_033
HL_41998.1
HL_5DOX_1381/2A/1324:1330No text annotation
Not in a motif group
homologous
HL_7RQB_034
HL_46680.1
HL_5DOX_1391/2A/1363:1368No text annotation
Not in a motif group
homologous
HL_7RQB_035
HL_87030.2
HL_5DOX_1401/2A/1389:1398No text annotation
Not in a motif group
homologous
HL_7RQB_036
HL_69023.2
HL_5DOX_1411/2A/1451:1459No text annotation
Not in a motif group
homologous
HL_7RQB_037
HL_32426.1
HL_5DOX_1421/2A/1492:1498No text annotation
Not in a motif group
homologous
HL_7RQB_038
HL_46680.1
HL_5DOX_1441/2A/1565:1568No text annotation
Not in a motif group
homologous
HL_7A0S_039
HL_38927.5
HL_5DOX_1451/2A/1612:1619No text annotation
Not in a motif group
homologous
HL_7RQB_040
HL_64430.2
HL_5DOX_1461/2A/1631:1635No text annotation
Not in a motif group
homologous
HL_7RQB_041
HL_01057.2
HL_5DOX_1471/2A/1691:1696No text annotation
Not in a motif group
homologous
HL_7RQB_042
HL_03562.2
HL_5DOX_1481/2A/1720:1742No text annotation
Not in a motif group
homologous
HL_7RQB_043
HL_43656.2
HL_5DOX_1491/2A/1752:1756No text annotation
Not in a motif group
homologous
HL_7RQB_044
HL_76539.5
HL_5DOX_1501/2A/1777:1787No text annotation
Not in a motif group
homologous
HL_7RQB_045
HL_43613.5
HL_5DOX_1511/2A/1806:1811No text annotation
Not in a motif group
homologous
HL_7RQB_046
HL_35490.2
HL_5DOX_1521/2A/1864:1878No text annotation
Not in a motif group
homologous
HL_7RQB_047
HL_35490.2
HL_5DOX_1531/2A/1909:1921No text annotation
Not in a motif group
homologous
HL_7RQB_048
NA
HL_5DOX_1541/2A/1949:1957No text annotation
Not in a motif group
homologous
HL_7RQB_049
HL_51824.1
HL_5DOX_1551/2A/2027:2036No text annotation
Not in a motif group
homologous
HL_7RQB_050
HL_90642.6
HL_5DOX_1571/2A/2205:2219No text annotation
Not in a motif group
homologous
HL_7RQB_052
HL_98426.1
HL_5DOX_1581/2A/2248:2256No text annotation
Not in a motif group
homologous
HL_4WF9_049
HL_53171.2
HL_5DOX_1591/2A/2264:2276No text annotation
Not in a motif group
homologous
HL_7RQB_054
HL_19870.6
HL_5DOX_1601/2A/2303:2313No text annotation
Not in a motif group
HL_5DOX_1611/2A/2324:2331No text annotation
Not in a motif group
homologous
HL_7RQB_056
HL_12078.4
HL_5DOX_1621/2A/2355:2362No text annotation
Not in a motif group
homologous
HL_7RQB_057
HL_53619.1
HL_5DOX_1631/2A/2374:2379No text annotation
Not in a motif group
homologous
HL_7RQB_058
HL_35490.2
HL_5DOX_1641/2A/2404:2413No text annotation
Not in a motif group
homologous
HL_7RQB_059
HL_40210.2
HL_5DOX_1651/2A/2471:2479No text annotation
Not in a motif group
homologous
HL_7RQB_060
HL_06192.2
HL_5DOX_1661/2A/2527:2536tRNA anticodon loop
Not in a motif group
geometric
HL_3W3S_002
HL_71170.1
HL_5DOX_1671/2A/2551:2557No text annotation
Not in a motif group
homologous
HL_5J7L_195
NA
HL_5DOX_1681/2A/2594:2599No text annotation
Not in a motif group
homologous
HL_7RQB_063
HL_35490.2
HL_5DOX_1691/2A/2658:2663GNRA
Not in a motif group
geometric
HL_2OIU_001
HL_35490.2
HL_5DOX_1701/2A/2701:2706No text annotation
Not in a motif group
homologous
HL_7RQB_065
HL_53171.2
HL_5DOX_1711/2A/2745:2759No text annotation
Not in a motif group
homologous
HL_7RQB_066
HL_56677.7
HL_5DOX_1731/2A/2819:2827No text annotation
Not in a motif group
homologous
HL_7RQB_068
HL_64690.1
HL_5DOX_1741/2A/2856:2861No text annotation
Not in a motif group
homologous
HL_7RQB_069
HL_35490.2
HL_5DOX_1751/2B/38:44No text annotation
Not in a motif group
geometric
HL_4V9F_071
HL_87939.2
HL_5DOX_1761/2B/86:91No text annotation
Not in a motif group
homologous
HL_7A0S_070
HL_35490.2
HL_5DOX_1771/2a/12:22No text annotation
Not in a motif group
homologous
HL_4LFB_001
HL_89881.2
HL_5DOX_1791/2a/158:163GNRA
Not in a motif group
homologous
HL_4LFB_003
HL_35490.2
HL_5DOX_1801/2a/189C:189HNo text annotation
Not in a motif group
homologous
HL_6CZR_075
HL_61849.1
HL_5DOX_1811/2a/200:217No text annotation
Not in a motif group
homologous
HL_6CZR_076
HL_34168.2
HL_5DOX_1821/2a/258:268No text annotation
Not in a motif group
geometric
HL_4WSM_226
HL_22031.2
HL_5DOX_1831/2a/296:301GNRA
Not in a motif group
homologous
HL_4LFB_007
HL_35490.2
HL_5DOX_1841/2a/320:333No text annotation
Not in a motif group
homologous
HL_4LFB_008
HL_81205.2
HL_5DOX_1851/2a/342:347UNCG
Not in a motif group
homologous
HL_4LFB_009
HL_03562.2
HL_5DOX_1861/2a/379:384GNRA
Not in a motif group
homologous
HL_4LFB_010
HL_35490.2
HL_5DOX_1871/2a/419:424UNCG
Not in a motif group
homologous
HL_4LFB_011
HL_03562.2
HL_5DOX_1881/2a/458:473No text annotation
Not in a motif group
homologous
HL_4LFB_012
HL_43656.2
HL_5DOX_1891/2a/521:528No text annotation
Not in a motif group
homologous
HL_4LFB_013
NA
HL_5DOX_1911/2a/689:698No text annotation
Not in a motif group
homologous
HL_4LFB_015
HL_12326.1
HL_5DOX_1931/2a/786:796No text annotation
Not in a motif group
homologous
HL_4LFB_017
HL_12326.1
HL_5DOX_1941/2a/838:848No text annotation
Not in a motif group
homologous
HL_6CZR_089
HL_53837.2
HL_5DOX_1951/2a/862:867GNRA
Not in a motif group
homologous
HL_4LFB_019
HL_35490.2
HL_5DOX_1961/2a/897:902GNRA
Not in a motif group
homologous
HL_4LFB_020
HL_35490.2
HL_5DOX_1971/2a/963:972No text annotation
Not in a motif group
homologous
HL_4LFB_021
NA
HL_5DOX_2001/2a/1076:1081GNRA
Not in a motif group
homologous
HL_4LFB_024
HL_35490.2
HL_5DOX_2021/2a/1134:1140No text annotation
Not in a motif group
HL_5DOX_2031/2a/1165:1171GNRA
Not in a motif group
homologous
HL_4LFB_027
HL_35490.2
HL_5DOX_2041/2a/1265:1270GNRA
Not in a motif group
homologous
HL_5J7L_027
HL_35490.2
HL_5DOX_2071/2a/1445:1457No text annotation
Not in a motif group
homologous
HL_6CZR_102
HL_49722.1
HL_5DOX_2081/2a/1515:1520No text annotation
Not in a motif group
homologous
HL_4LFB_032
NA

Problematic loops

#loop idProblemSequence
HL_5DOX_016No text annotation
HL_5DOX_021No text annotation
HL_5DOX_029No text annotation
HL_5DOX_030No text annotation
HL_5DOX_041No text annotation
HL_5DOX_050No text annotation
HL_5DOX_052No text annotation
HL_5DOX_068No text annotation
HL_5DOX_069No text annotation
HL_5DOX_074No text annotation
HL_5DOX_081UNCG
HL_5DOX_082GNRA
HL_5DOX_086No text annotation
HL_5DOX_088Other HL
HL_5DOX_094GNRA
HL_5DOX_099Other HL
HL_5DOX_100No text annotation
HL_5DOX_101No text annotation
HL_5DOX_108No text annotation
HL_5DOX_120No text annotation
HL_5DOX_125No text annotation
HL_5DOX_128No text annotation
HL_5DOX_129No text annotation
HL_5DOX_133No text annotation
HL_5DOX_134No text annotation
HL_5DOX_135No text annotation
HL_5DOX_143No text annotation
HL_5DOX_156No text annotation
HL_5DOX_172No text annotation
HL_5DOX_178No text annotation
HL_5DOX_190No text annotation
HL_5DOX_192Other HL
HL_5DOX_198GNRA
HL_5DOX_199No text annotation
HL_5DOX_201No text annotation
HL_5DOX_205No text annotation
HL_5DOX_206No text annotation

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
IL_5DOX_0011/1A/24:30,
1/1A/510:516
Triple sheared with non-canonical cWW
Not in a motif group
homologous
IL_7RQB_001
IL_66414.6
IL_5DOX_0021/1A/36:37,
1/1A/442:444
Single bulged A
Not in a motif group
homologous
IL_7RQB_002
IL_37497.6
IL_5DOX_0031/1A/42:43,
1/1A/434:436
Minor groove platform
Not in a motif group
homologous
IL_7RQB_003
IL_42622.4
IL_5DOX_0041/1A/81:85,
1/1A/97:105
Kink-turn
Not in a motif group
homologous
IL_7RQB_004
IL_45067.2
IL_5DOX_0051/1A/183:184,
1/1A/212:214
Single stack bend
Not in a motif group
homologous
IL_7RQB_005
IL_76488.4
IL_5DOX_0061/1A/188:194,
1/1A/201:208
8x7 Sarcin-Ricin; G-bulge
Not in a motif group
geometric
IL_7RQB_006
IL_04346.7
IL_5DOX_0071/1A/239:245,
1/1A/253:258
7x6 Sarcin-Ricin; G-bulge
Not in a motif group
homologous
IL_7RQB_007
IL_76042.2
IL_5DOX_0081/1A/272D:272E,
1/1A/363E:364
Major groove platform
Not in a motif group
homologous
IL_7RQB_009
IL_27635.3
IL_5DOX_0101/1A/280:284,
1/1A/357:360
tSH-tHW
Not in a motif group
homologous
IL_7RQB_011
IL_04059.1
IL_5DOX_0111/1A/288:290,
1/1A/350:353
Isolated tHS basepair with bulges
Not in a motif group
homologous
IL_7RQB_012
IL_38958.7
IL_5DOX_0121/1A/293:295,
1/1A/343:347
No text annotation
Not in a motif group
homologous
IL_7RQB_013
IL_69440.1
IL_5DOX_0131/1A/481:484,
1/1A/496:509
No text annotation
Not in a motif group
homologous
IL_7RQB_014
IL_60992.6
IL_5DOX_0141/1A/564:566,
1/1A/575:577
No text annotation
Not in a motif group
geometric
IL_7RQB_015
IL_86319.2
IL_5DOX_0151/1A/606:610,
1/1A/618:622
AAA cross-strand stack
Not in a motif group
homologous
IL_7RQB_016
IL_17136.1
IL_5DOX_0161/1A/672:674,
1/1A/806:808
No text annotation
Not in a motif group
homologous
IL_7RQB_017
IL_86319.2
IL_5DOX_0171/1A/674:678,
1/1A/799:806
No text annotation
Not in a motif group
geometric
IL_7RQB_018
IL_17470.6
IL_5DOX_0181/1A/697:698,
1/1A/763:765
Single bulged A
Not in a motif group
homologous
IL_7A0S_016
IL_37497.6
IL_5DOX_0191/1A/702:703,
1/1A/728:730
Single bulged G
Not in a motif group
homologous
IL_5J7L_262
IL_00225.3
IL_5DOX_0201/1A/703:707,
1/1A/724:728
Triple sheared
Not in a motif group
geometric
IL_7RQB_021
IL_56467.8
IL_5DOX_0211/1A/738:741,
1/1A/756:758
Major groove platform with extra cWW
Not in a motif group
homologous
IL_7RQB_022
IL_05564.2
IL_5DOX_0221/1A/775:777,
1/1A/787:791
Multiple bulged bases
Not in a motif group
geometric
IL_7RQB_023
IL_90991.6
IL_5DOX_0231/1A/837:838,
1/1A/940:942
Single stack bend
Not in a motif group
homologous
IL_5J7L_266
IL_92001.1
IL_5DOX_0241/1A/844:846,
1/1A/931:934
Intercalated cWW
Not in a motif group
geometric
IL_7RQB_025
IL_52767.4
IL_5DOX_0251/1A/846:850,
1/1A/927:931
No text annotation
Not in a motif group
homologous
IL_7RQB_026
IL_94165.1
IL_5DOX_0281/1A/864:868,
1/1A/909:912
C-loop
Not in a motif group
homologous
IL_7RQB_029
IL_02509.1
IL_5DOX_0291/1A/870:872,
1/1A/905:907
Isolated cWS basepair
Not in a motif group
homologous
IL_7RQB_030
IL_52767.4
IL_5DOX_0301/1A/875:877,
1/1A/899:902
Minor groove platform with extra cWW
Not in a motif group
homologous
IL_7RQB_031
IL_46796.1
IL_5DOX_0311/1A/877:879,
1/1A/898:899
Minor groove platform
Not in a motif group
geometric
IL_7RQB_032
IL_80097.1
IL_5DOX_0321/1A/880:881,
1/1A/895:897
Single bulged A
Not in a motif group
homologous
IL_7RQB_033
IL_37497.6
IL_5DOX_0341/1A/994:996,
1/1A/1159:1160
Single bulged C
Not in a motif group
homologous
IL_7RQB_035
IL_61258.12
IL_5DOX_0351/1A/998:1002,
1/1A/1153:1157
UAA/GAN
Not in a motif group
homologous
IL_7RQB_036
IL_89002.2
IL_5DOX_0361/1A/1004:1011,
1/1A/1150:1151
SSU/LSU pseudoknot
Not in a motif group
homologous
IL_7RQB_037
IL_15861.7
IL_5DOX_0371/1A/1011:1013,
1/1A/1149:1150
Single bulged U
Not in a motif group
geometric
IL_7RQB_038
IL_83039.16
IL_5DOX_0381/1A/1018:1024,
1/1A/1140:1144
No text annotation
Not in a motif group
homologous
IL_7RQB_039
IL_57188.3
IL_5DOX_0391/1A/1024:1030,
1/1A/1124:1140
No text annotation
Not in a motif group
geometric
IL_7RQB_040
IL_50715.1
IL_5DOX_0401/1A/1031:1034,
1/1A/1121:1123
Isolated non-canonical cWW with bulges
Not in a motif group
homologous
IL_7RQB_041
IL_43275.1
IL_5DOX_0411/1A/1041:1043,
1/1A/1112:1114
Isolated cWH basepair
Not in a motif group
geometric
IL_3R1C_018
IL_70707.2
IL_5DOX_0421/1A/1043:1051,
1/1A/1108:1112
Kink-turn
Not in a motif group
geometric
IL_7RQB_042
IL_90538.4
IL_5DOX_0451/1A/1196:1198,
1/1A/1247:1250
Isolated cWS basepair
Not in a motif group
homologous
IL_7RQB_045
IL_52767.4
IL_5DOX_0461/1A/1202:1206,
1/1A/1240:1243
No text annotation
Not in a motif group
homologous
IL_7RQB_046
IL_68574.2
IL_5DOX_0471/1A/1208:1215,
1/1A/1234:1238
Kink-turn
Not in a motif group
homologous
IL_7RQB_047
IL_70923.2
IL_5DOX_0481/1A/1219:1221,
1/1A/1229:1230
Single bulged A
Not in a motif group
homologous
IL_7RQB_048
IL_37497.6
IL_5DOX_0491/1A/1262:1269,
1/1A/2011:2017
8x7 Sarcin-Ricin; G-bulge
Not in a motif group
homologous
IL_7RQB_049
IL_04346.7
IL_5DOX_0501/1A/1310:1313,
1/1A/1603:1604
Major groove platform; stack outside cWW
Not in a motif group
homologous
IL_7RQB_050
IL_50694.2
IL_5DOX_0511/1A/1319:1323,
1/1A/1331:1333
C-loop
Not in a motif group
homologous
IL_7RQB_051
IL_63596.6
IL_5DOX_0521/1A/1351:1355,
1/1A/1376:1380
UAA/GAN
Not in a motif group
homologous
IL_7RQB_052
IL_89002.2
IL_5DOX_0531/1A/1357:1361,
1/1A/1370:1374
tSH-tHW-tHS
Not in a motif group
homologous
IL_7RQB_053
IL_17136.1
IL_5DOX_0541/1A/1415:1416,
1/1A/1582:1587
No text annotation
Not in a motif group
homologous
IL_7RQB_054
IL_67474.4
IL_5DOX_0551/1A/1417:1421,
1/1A/1577:1581
UAA/GAN
Not in a motif group
homologous
IL_7RQB_055
IL_89002.2
IL_5DOX_0561/1A/1433:1435,
1/1A/1557:1560
Isolated tWW turn
Not in a motif group
homologous
IL_7RQB_056
IL_54997.7
IL_5DOX_0571/1A/1437:1440,
1/1A/1551:1555
tSH-tHW
Not in a motif group
homologous
IL_7RQB_057
IL_04059.1
IL_5DOX_0581/1A/1448:1450,
1/1A/1462:1463
Single stack bend
Not in a motif group
homologous
IL_7RQB_058
IL_76488.4
IL_5DOX_0591/1A/1450A:1451,
1/1A/1459:1461
Single bulged A
Not in a motif group
geometric
IL_7RQB_059
IL_37497.6
IL_5DOX_0601/1A/1469:1473,
1/1A/1518:1523
UAA/GAN
Not in a motif group
homologous
IL_7RQB_060
IL_07235.1
IL_5DOX_0611/1A/1481:1482,
1/1A/1506:1510
No text annotation
Not in a motif group
homologous
IL_7RQB_061
IL_52493.1
IL_5DOX_0621/1A/1489:1491,
1/1A/1499:1500
Single bulged A
Not in a motif group
homologous
IL_7RQB_062
IL_37497.6
IL_5DOX_0631/1A/1526:1529,
1/1A/1540:1546
No text annotation
Not in a motif group
homologous
IL_7RQB_063
IL_02656.1
IL_5DOX_0641/1A/1651:1656,
1/1A/2004:2006
No text annotation
Not in a motif group
homologous
IL_7RQB_064
IL_12566.2
IL_5DOX_0651/1A/1686:1691,
1/1A/1696:1702
tSH-tSH-tHH-tHS
Not in a motif group
homologous
IL_7RQB_068
IL_65969.2
IL_5DOX_0671/1A/1798:1804,
1/1A/1813:1821
Kink-turn related
Not in a motif group
homologous
IL_7RQB_070
IL_17069.3
IL_5DOX_0681/1A/1837:1840,
1/1A/1902:1903
Major groove outside cWW, minor groove, intercalation pocket
Not in a motif group
homologous
IL_7RQB_071
IL_88739.3
IL_5DOX_0691/1A/1841:1842,
1/1A/1898:1901
Major groove outside cWW, minor groove, intercalation pocket
Not in a motif group
homologous
IL_5J7L_315
IL_16396.2
IL_5DOX_0701/1A/1846:1849,
1/1A/1893:1894
Minor groove platform
Not in a motif group
homologous
IL_7RQB_073
IL_88739.3
IL_5DOX_0711/1A/1851:1855,
1/1A/1887:1891
UAA/GAN with extra pair
Not in a motif group
homologous
IL_7RQB_074
IL_90318.1
IL_5DOX_0721/1A/1856:1860,
1/1A/1882:1886
Triple sheared
Not in a motif group
homologous
IL_7RQB_075
IL_56467.8
IL_5DOX_0731/1A/1933:1934,
1/1A/1964:1967
Multiple bulged bases
Not in a motif group
geometric
IL_7RQB_076
IL_59677.2
IL_5DOX_0741/1A/1934:1945,
1/1A/1961:1964
No text annotation
Not in a motif group
homologous
IL_7RQB_077
NA
IL_5DOX_0751/1A/2050:2052,
1/1A/2617:2618
Major groove platform
Not in a motif group
homologous
IL_7RQB_078
IL_27635.3
IL_5DOX_0761/1A/2054:2057,
1/1A/2611:2615
No text annotation
Not in a motif group
IL_5DOX_0771/1A/