RNA 3D Hub //

5DM6 Hairpin, Internal, and multi-helix Junction Loop Motifs

Download loops

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
HL_5DM6_0011/X/59:68Pseudoknot with intercalation
homologous
HL_7A0S_001
HL_93438.2
HL_5DM6_0021/X/86:97No text annotation
homologous
HL_7A0S_002
HL_50418.1
HL_5DM6_0031/X/123:128No text annotation
homologous
HL_4WF9_003
HL_75660.5
HL_5DM6_0041/X/135:140GNRA
geometric
HL_3V7E_003
HL_37824.8
HL_5DM6_0051/X/148:153GNRA
homologous
HL_7A0S_005
HL_37824.8
HL_5DM6_0061/X/166:173No text annotation
homologous
HL_7A0S_006
HL_30068.2
HL_5DM6_0071/X/197:202No text annotation
homologous
HL_7A0S_007
HL_53890.2
HL_5DM6_0081/X/218:224No text annotation
homologous
HL_7A0S_008
HL_37369.2
HL_5DM6_0091/X/305:312T-loop with 1 bulged base
homologous
HL_7A0S_010
HL_01609.3
HL_5DM6_0101/X/319:323No text annotation
homologous
HL_7A0S_011
HL_75660.5
HL_5DM6_0111/X/327:335T-loop with unstacked turn
homologous
HL_5J7L_144
HL_27670.2
HL_5DM6_0121/X/382:392No text annotation
homologous
HL_7A0S_013
HL_91503.7
HL_5DM6_0131/X/410:417Pseudoknot geometry
homologous
HL_5J7L_146
HL_30680.3
HL_5DM6_0141/X/462:467GNRA
homologous
HL_7A0S_015
HL_37824.8
HL_5DM6_0151/X/487:493GNRA
homologous
HL_4WF9_016
HL_37824.8
HL_5DM6_0161/X/544:549Mini UNCG with extended bulge
geometric
HL_7A0S_017
HL_48778.2
HL_5DM6_0171/X/566:575T-loop with 2 stacked bulged bases
geometric
HL_7A0S_018
HL_28252.9
HL_5DM6_0181/X/611:616No text annotation
geometric
HL_2Y9H_003
HL_75660.5
HL_5DM6_0191/X/629:634GNRA
homologous
HL_5J7L_152
HL_37824.8
HL_5DM6_0201/X/640:647GNRA wlth tandem sheared
geometric
HL_3HHN_010
HL_81538.2
HL_5DM6_0211/X/712:719No text annotation
geometric
HL_5TBW_006
NA
HL_5DM6_0221/X/744:753No text annotation
homologous
HL_7A0S_022
HL_88205.2
HL_5DM6_0231/X/779:785No text annotation
homologous
HL_5J7L_156
HL_87954.2
HL_5DM6_0241/X/826:831No text annotation
homologous
HL_7RQB_025
NA
HL_5DM6_0261/X/955:962GNRA
homologous
HL_7A0S_026
HL_37824.8
HL_5DM6_0271/X/978:985No text annotation
homologous
HL_7A0S_027
HL_42998.2
HL_5DM6_0281/X/1064:1074No text annotation
homologous
HL_6PRV_001
HL_19210.3
HL_5DM6_0291/X/1092:1099No text annotation
homologous
HL_7RQB_030
NA
HL_5DM6_0311/X/1222:1227GNRA
homologous
HL_7A0S_031
HL_37824.8
HL_5DM6_0321/X/1281:1289T-loop with 2 stacked bulged bases
homologous
HL_7A0S_032
HL_28252.9
HL_5DM6_0331/X/1324:1330No text annotation
homologous
HL_7RQB_034
NA
HL_5DM6_0341/X/1363:1368GNRA variation
homologous
HL_7A0S_034
HL_37824.8
HL_5DM6_0761/X/1389:1398No text annotation
homologous
HL_7A0S_035
HL_81545.2
HL_5DM6_0361/X/1451:1461Pseudoknot
homologous
HL_7A0S_036
HL_93135.1
HL_5DM6_0371/X/1492:1498No text annotation
homologous
HL_7A0S_037
HL_39243.1
HL_5DM6_0381/X/1533:1538No text annotation
geometric
HL_5J7L_143
HL_75660.5
HL_5DM6_0391/X/1565:1568Mini UNCG
homologous
HL_5J7L_172
HL_48778.2
HL_5DM6_0401/X/1612:1619No text annotation
homologous
HL_7A0S_040
HL_89567.2
HL_5DM6_0411/X/1630:1635No text annotation
homologous
HL_7RQB_041
NA
HL_5DM6_0421/X/1691:1696UNCG
homologous
HL_5J7L_175
HL_34617.5
HL_5DM6_0431/X/1734:1738No text annotation
homologous
HL_7A0S_043
NA
HL_5DM6_0441/X/1746:1750No text annotation
homologous
HL_4WF9_042
HL_80709.3
HL_5DM6_0451/X/1776:1788No text annotation
homologous
HL_7A0S_045
HL_60266.1
HL_5DM6_0461/X/1806:1811GNRA
homologous
HL_7A0S_046
HL_93535.1
HL_5DM6_0471/X/1864:1878GNRA
homologous
HL_7A0S_047
HL_37824.8
HL_5DM6_0731/X/1908:1922No text annotation
HL_5DM6_0491/X/1949:1957No text annotation
homologous
HL_7RQB_049
NA
HL_5DM6_0501/X/2027:2036No text annotation
homologous
HL_7A0S_049
HL_61996.3
HL_5DM6_0521/X/2205:2217No text annotation
homologous
HL_7A0S_051
HL_38046.1
HL_5DM6_0771/X/2205:2218No text annotation
homologous
HL_7A0S_051
HL_38046.1
HL_5DM6_0531/X/2248:2256No text annotation
homologous
HL_7A0S_052
HL_85367.2
HL_5DM6_0541/X/2264:2276No text annotation
homologous
HL_7A0S_053
HL_91939.2
HL_5DM6_0751/X/2304:2312No text annotation
homologous
HL_7A0S_076
HL_50860.2
HL_5DM6_0561/X/2324:2331Pseudoknot geometry
geometric
HL_7A0S_055
HL_93324.4
HL_5DM6_0571/X/2355:2362GNRA with extra cWW
homologous
HL_7A0S_056
HL_04259.3
HL_5DM6_0581/X/2374:2379GNRA
homologous
HL_7A0S_057
HL_37824.8
HL_5DM6_0591/X/2404:2413No text annotation
homologous
HL_7A0S_058
HL_53454.2
HL_5DM6_0601/X/2471:2479No text annotation
homologous
HL_5J7L_193
HL_32735.2
HL_5DM6_0611/X/2528:2535GNRA variation
homologous
HL_7A0S_060
HL_31585.4
HL_5DM6_0621/X/2551:2557No text annotation
homologous
HL_4WF9_058
HL_30068.2
HL_5DM6_0631/X/2594:2599GNRA
homologous
HL_7A0S_062
HL_37824.8
HL_5DM6_0641/X/2658:2663GNRA
homologous
HL_7A0S_063
HL_37824.8
HL_5DM6_0651/X/2701:2706Ribsomal LSU H95
homologous
HL_5J7L_198
HL_65794.5
HL_5DM6_0661/X/2745:2759No text annotation
homologous
HL_7RQB_066
NA
HL_5DM6_0671/X/2793:2799No text annotation
HL_5DM6_0681/X/2819:2827No text annotation
homologous
HL_7A0S_067
HL_64690.6
HL_5DM6_0691/X/2856:2861GNRA
homologous
HL_7A0S_068
HL_37824.8
HL_5DM6_0701/Y/40:46No text annotation
homologous
HL_5J7L_203
HL_47787.2
HL_5DM6_0711/Y/88:93GNRA
homologous
HL_7A0S_070
HL_37824.8

Problematic loops

#loop idProblemSequence
HL_5DM6_072No text annotation
HL_5DM6_025No text annotation
HL_5DM6_030No text annotation
HL_5DM6_035No text annotation
HL_5DM6_048No text annotation
HL_5DM6_051No text annotation
HL_5DM6_074No text annotation
HL_5DM6_055No text annotation

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
IL_5DM6_0011/X/24:30,
1/X/510:516		Triple sheared with non-canonical cWW
homologous
IL_4WF9_001
IL_04021.2
IL_5DM6_0021/X/36:37,
1/X/442:444		Single bulged A
homologous
IL_7RQB_002
NA
IL_5DM6_1281/X/43:44,
1/X/434:436		Minor groove platform
homologous
IL_9DFE_348
IL_51454.3
IL_5DM6_0041/X/81:85,
1/X/98:105		Kink-turn
homologous
IL_7A0S_004
IL_94910.1
IL_5DM6_0051/X/162:163,
1/X/184:186		Single stack bend
homologous
IL_4WF9_007
IL_90729.1
IL_5DM6_0061/X/165B:166,
1/X/173:180		8x7 Sarcin-Ricin; G-bulge
geometric
IL_7A0S_006
IL_04346.10
IL_5DM6_0071/X/210:217,
1/X/225:231		8x7 Sarcin-Ricin; G-bulge
homologous
IL_7A0S_007
IL_04346.10
IL_5DM6_0081/X/292:295,
1/X/343:348		No text annotation
homologous
IL_7A0S_008
IL_15067.1
IL_5DM6_0111/X/481:484,
1/X/496:509		No text annotation
homologous
IL_7A0S_009
IL_81516.2
IL_5DM6_0121/X/542:544,
1/X/549:551		No text annotation
IL_5DM6_0131/X/564:566,
1/X/575:577		Isolated non-canonical cWW pair
homologous
IL_7A0S_011
IL_07785.1
IL_5DM6_0141/X/591:592A,
1/X/665:666		Single bulged A
geometric
IL_7KGA_002
IL_31462.7
IL_5DM6_0151/X/605:609,
1/X/618:622		AAA cross-strand stack
homologous
IL_7RQB_016
NA
IL_5DM6_0161/X/672:674,
1/X/806:808		Isolated non-canonical cWW pair
homologous
IL_5J7L_259
IL_87907.2
IL_5DM6_0171/X/674:678,
1/X/799:806		tHW-tHW cross-strand stack
geometric
IL_7A0S_015
IL_54041.2
IL_5DM6_0181/X/697:698,
1/X/763:765		Single bulged A
homologous
IL_7A0S_016
IL_31462.7
IL_5DM6_0191/X/702:703,
1/X/728:730		Single bulged G
homologous
IL_7A0S_017
IL_00225.14
IL_5DM6_0201/X/703:708,
1/X/723:728		Triple sheared with non-canonical cWW
geometric
IL_7A0S_018
IL_06136.2
IL_5DM6_0211/X/738:741,
1/X/756:758		Major groove platform with extra cWW
geometric
IL_7A0S_019
IL_51387.3
IL_5DM6_0221/X/741:743,
1/X/754:756		Isolated non-canonical cWW pair
homologous
IL_7A0S_020
IL_87907.2
IL_5DM6_0231/X/775:777,
1/X/787:791		Multiple bulged bases
homologous
IL_7RQB_023
NA
IL_5DM6_0241/X/837:838,
1/X/940:942		Single stack bend
homologous
IL_5J7L_266
IL_90729.1
IL_5DM6_0251/X/844:848,
1/X/931:934		No text annotation
homologous
IL_4WF9_029
IL_06300.1
IL_5DM6_0261/X/850:851,
1/X/927:929		Single bulged C
geometric
IL_7A0S_025
IL_61258.15
IL_5DM6_0271/X/851:853,
1/X/925:927		Isolated non-canonical cWW pair
homologous
IL_7A0S_026
IL_87907.2
IL_5DM6_1181/X/858:862,
1/X/915:920		5x5 Sarcin-Ricin with intercalated A; G-bulge
homologous
IL_9DFE_026
IL_38862.4
IL_5DM6_0291/X/862:863,
1/X/913:915		Minor groove platform
homologous
IL_7A0S_028
IL_51454.3
IL_5DM6_0301/X/864:868,
1/X/909:912		C-loop
homologous
IL_4WF9_033
IL_26222.2
IL_5DM6_0311/X/870:872,
1/X/905:907		Isolated near basepair
homologous
IL_7A0S_030
IL_42997.3
IL_5DM6_0321/X/952:954,
1/X/963:965		Isolated non-canonical cWW pair
homologous
IL_7A0S_031
IL_87907.2
IL_5DM6_0331/X/994:996,
1/X/1159:1160		Single bulged C
homologous
IL_7RQB_035
NA
IL_5DM6_1191/X/998:1002,
1/X/1153:1157		UAA/GAN
homologous
IL_7A0S_033
IL_38507.2
IL_5DM6_0351/X/1004:1011,
1/X/1150:1151		SSU/LSU pseudoknot
geometric
IL_7A0S_034
IL_41203.4
IL_5DM6_1201/X/1004:1013,
1/X/1149:1151		No text annotation
IL_5DM6_0361/X/1011:1013,
1/X/1149:1150		Single bulged U
geometric
IL_7A0S_035
IL_89505.4
IL_5DM6_0371/X/1018:1024,
1/X/1139:1144		No text annotation
geometric
IL_7RQB_039
NA
IL_5DM6_0381/X/1024:1030,
1/X/1124:1139		No text annotation
geometric
IL_7A0S_037
IL_50715.3
IL_5DM6_0391/X/1031:1034,
1/X/1121:1123		Isolated non-canonical cWW pair
homologous
IL_7RQB_041
NA
IL_5DM6_0411/X/1043:1051,
1/X/1108:1112		Kink-turn
homologous
IL_9DFE_041
IL_99692.2
IL_5DM6_0421/X/1059:1062,
1/X/1076:1079		No text annotation
homologous
IL_5J7L_285
IL_92446.2
IL_5DM6_0431/X/1164:1167,
1/X/1182:1185		Tandem non-canonical cWW pairs
homologous
IL_7A0S_040
IL_77658.1
IL_5DM6_0441/X/1196:1198,
1/X/1247:1250		Isolated cWS basepair
homologous
IL_7A0S_041
IL_42997.3
IL_5DM6_0451/X/1204:1206,
1/X/1239:1241		Isolated non-canonical cWW pair
homologous
IL_7A0S_042
IL_87907.2
IL_5DM6_0461/X/1208:1215,
1/X/1234:1238		Kink-turn
homologous
IL_5J7L_288
IL_70923.9
IL_5DM6_0471/X/1219:1221,
1/X/1228:1230		Intercalated cWW
homologous
IL_7A0S_044
IL_31737.3
IL_5DM6_0481/X/1262:1269,
1/X/2011:2017		8x7 Sarcin-Ricin; G-bulge
homologous
IL_7RQB_049
NA
IL_5DM6_0491/X/1310:1313,
1/X/1603:1604		Major groove platform; stack outside cWW
homologous
IL_7A0S_046
IL_50694.7
IL_5DM6_1291/X/1319:1323,
1/X/1331:1333		Major groove minor groove platform with tHH
homologous
IL_4WF9_050
IL_83150.2
IL_5DM6_0511/X/1351:1355,
1/X/1376:1380		UAA/GAN
homologous
IL_7A0S_048
IL_89021.2
IL_5DM6_0521/X/1357:1361,
1/X/1370:1374		tSH-tHW-tHS
homologous
IL_7A0S_049
IL_17136.7
IL_5DM6_0531/X/1412:1416,
1/X/1582:1589		Kink-turn
homologous
IL_7A0S_050
IL_69229.3
IL_5DM6_0541/X/1417:1421,
1/X/1577:1581		UAA/GAN
homologous
IL_7A0S_051
IL_38507.2
IL_5DM6_0551/X/1433:1435,
1/X/1557:1560		Isolated tWW turn
homologous
IL_7RQB_056
NA
IL_5DM6_0561/X/1437:1440,
1/X/1551:1555		tSH-tHW
homologous
IL_7A0S_053
IL_99646.2
IL_5DM6_0571/X/1448:1450,
1/X/1462:1463		Single stack bend
homologous
IL_7A0S_054
IL_26793.1
IL_5DM6_0581/X/1473:1475,
1/X/1517:1519		Isolated non-canonical cWW pair
geometric
IL_4P3T_005
NA
IL_5DM6_1221/X/1473:1478,
1/X/1514:1519		No text annotation
IL_5DM6_0591/X/1475:1478,
1/X/1514:1517		Double sheared
geometric
IL_4WF9_087
IL_09705.15
IL_5DM6_1301/X/1481:1482,
1/X/1506:1511		No text annotation
IL_5DM6_0611/X/1487:1491,
1/X/1499:1501		No text annotation
IL_5DM6_0621/X/1651:1656,
1/X/2004:2006		No text annotation
homologous
IL_7A0S_059
IL_12566.4
IL_5DM6_0631/X/1663:1665,
1/X/1995:1997		Isolated tWW turn
homologous
IL_7A0S_060
IL_67095.2
IL_5DM6_0641/X/1666:1669,
1/X/1993:1994		Major groove platform; stack outside cWW
geometric
IL_7A0S_061
IL_50694.7
IL_5DM6_1241/X/1666:1674,
1/X/1990:1994		No text annotation
homologous
IL_7A0S_109
IL_22854.4
IL_5DM6_0651/X/1669:1674,
1/X/1990:1993		Intercalated tWH
homologous
IL_7RQB_067
NA
IL_5DM6_0661/X/1686:1691,
1/X/1696:1702		tSH-tSH-tHH-tHS
geometric
IL_7A0S_063
IL_47346.2
IL_5DM6_0671/X/1770:1771,
1/X/1980:1982		Single bulged A
homologous
IL_7A0S_064
IL_31462.7
IL_5DM6_0681/X/1798:1804,
1/X/1813:1821		Kink-turn related
homologous
IL_5J7L_313
IL_17069.5
IL_5DM6_0691/X/1837:1840,
1/X/1902:1903		Minor groove platform, major groove intercalation
homologous
IL_7A0S_066
IL_95583.2
IL_5DM6_0701/X/1841:1842,
1/X/1898:1901		Major groove intercalation
homologous
IL_5J7L_315
IL_82107.5
IL_5DM6_0711/X/1846:1849,
1/X/1893:1894		Major groove minor groove platform; mini C-loop
homologous
IL_5J7L_316
IL_68140.4
IL_5DM6_0721/X/1850:1855,
1/X/1887:1892		No text annotation
IL_5DM6_0731/X/1856:1860,
1/X/1882:1886		Triple sheared
homologous
IL_7RQB_075
NA
IL_5DM6_0751/X/1933:1934,
1/X/1964:1967		Bulged stacked bases
homologous
IL_5J7L_318
IL_22551.4
IL_5DM6_0761/X/1934:1945,
1/X/1961:1964		No text annotation
geometric
IL_7A0S_072
IL_04332.3
IL_5DM6_0771/X/2050:2052,
1/X/2617:2618		Major groove platform
homologous
IL_7RQB_078
NA
IL_5DM6_0781/X/2054:2057,
1/X/2611:2615		No text annotation
homologous
IL_7A0S_074
IL_70335.1
IL_5DM6_0791/X/2067:2069,
1/X/2442:2443		Single bulged U
homologous
IL_7A0S_075
IL_89505.4
IL_5DM6_0801/X/2070:2071,
1/X/2438:2441		Minor groove platform
homologous
IL_7A0S_076
IL_51454.3
IL_5DM6_0811/X/2081:2083,
1/X/2236:2239		Isolated tHS basepair with bulges
homologous
IL_7A0S_077
IL_85599.2
IL_5DM6_0821/X/2085:2087,
1/X/2232:2234		Isolated non-canonical cWW pair
homologous
IL_7A0S_078
IL_28037.2
IL_5DM6_0841/X/2110:2120,
1/X/2178:2179		No text annotation
IL_5DM6_1251/X/2110:2122,
1/X/2176:2179		No text annotation
IL_5DM6_1311/X/2124:2127,
1/X/2161:2174		No text annotation
homologous
IL_3U4M_003
IL_75283.2
IL_5DM6_1261/X/2129:2141,
1/X/2150:2159		No text annotation
IL_5DM6_0891/X/2203:2205,
1/X/2217:2220		No text annotation
IL_5DM6_0901/X/2297:2299,
1/X/2317:2321		Isolated tHS basepair with bulges
geometric
IL_5TBW_099
NA
IL_5DM6_0911/X/2350:2353,
1/X/2364:2367		Double sheared
homologous
IL_7RQB_089
NA
IL_5DM6_0921/X/2401:2403,
1/X/2414:2415		Major groove platform
homologous
IL_7A0S_082
IL_48076.6
IL_5DM6_0931/X/2453:2454,
1/X/2498:2500		Single stack bend
geometric
IL_7A0S_083
IL_26793.1
IL_5DM6_0941/X/2454:2455,
1/X/2496:2498		Major groove platform
homologous
IL_7RQB_092
NA
IL_5DM6_0951/X/2457:2459,
1/X/2493:2494		Major groove platform
geometric
IL_7A0S_085
IL_48076.6
IL_5DM6_0961/X/2459:2461,
1/X/2489:2493		Major groove minor groove platform with extra cWW
homologous
IL_7A0S_086
IL_51387.3
IL_5DM6_0971/X/2466:2470,
1/X/2480:2484		Double sheared with non-canonical cWW
homologous
IL_7A0S_087
IL_17948.2
IL_5DM6_0981/X/2507:2508,
1/X/2580:2582		Major groove platform
homologous
IL_7A0S_088
IL_07039.3
IL_5DM6_0991/X/2510:2512,
1/X/2574:2578		Isolated non-canonical cWW with bulges
homologous
IL_7A0S_089
IL_07785.1
IL_5DM6_1001/X/2512:2513,
1/X/2571:2574		Multiple bulged bases
geometric
IL_7A0S_090
IL_42626.2
IL_5DM6_1011/X/2522:2523,
1/X/2540:2543		Major groove platform with intercalation
homologous
IL_7A0S_091
IL_02555.1
IL_5DM6_1021/X/2591:2592,
1/X/2601:2603		Single bulged A
homologous
IL_7RQB_101
NA
IL_5DM6_1031/X/2636:2640,
1/X/2774:2782		tSH-tHS-tHW
homologous
IL_7A0S_093
IL_04638.3
IL_5DM6_1041/X/2652:2658,
1/X/2663:2668		Sarcin-Ricin target in LSU H95; G-bulge
geometric
IL_7A0S_094
IL_16458.4
IL_5DM6_1051/X/2680:2684,
1/X/2725:2727		C-loop
homologous
IL_7A0S_095
IL_63596.11
IL_5DM6_1061/X/2687:2691,
1/X/2718:2722		UAA/GAN related, with intercalation
homologous
IL_7A0S_096
IL_23774.1
IL_5DM6_1071/X/2695:2696,
1/X/2711:2714		Multiple bulged bases
homologous
IL_7A0S_097
IL_42626.2
IL_5DM6_1081/X/2737:2742,
1/X/2762:2767		UAA/GAN with extra cWW
homologous
IL_7A0S_098
IL_49767.8
IL_5DM6_1091/X/2838:2839,
1/X/2878:2880		Major groove intercalation
homologous
IL_7A0S_099
IL_00225.14
IL_5DM6_1101/X/2843:2845,
1/X/2871:2874		Decoding loop related
homologous
IL_7A0S_100
IL_31531.3
IL_5DM6_1111/X/2847:2852,
1/X/2865:2869		No text annotation
homologous
IL_7A0S_101
IL_70411.2
IL_5DM6_1121/Y/19:21,
1/Y/66:69		Isolated non-canonical cWW with bulges
geometric
IL_5ML7_010
IL_07785.1
IL_5DM6_1131/Y/25:30,
1/Y/58:62		No text annotation
homologous
IL_7A0S_103
IL_18472.4
IL_5DM6_1141/Y/32:33,
1/Y/53:56		No text annotation
IL_5DM6_1151/Y/36:40,
1/Y/46:50		Symmetric double minor groove platform
geometric
IL_5J7L_358
IL_58103.11
IL_5DM6_1161/Y/73:81,
1/Y/100:108		Bacterial 5S Loop E
homologous
IL_7A0S_106
IL_56455.6
IL_5DM6_1171/Y/82:84,
1/Y/97:99		Isolated non-canonical cWW pair
homologous
IL_7A0S_107
IL_07785.1

Problematic loops

#loop idProblemSequence
IL_5DM6_003Major groove platform with extra cWW
IL_5DM6_009Isolated non-canonical cWW pair
IL_5DM6_010Isolated non-canonical cWW pair
IL_5DM6_0285x5 Sarcin-Ricin with intercalated A; G-bulge
IL_5DM6_034UAA/GAN with extra cWW
IL_5DM6_040Isolated non-canonical cWW pair
IL_5DM6_050No text annotation
IL_5DM6_121UAA/GAN with extra cWW
IL_5DM6_060No text annotation
IL_5DM6_123No text annotation
IL_5DM6_074No text annotation
IL_5DM6_083No text annotation
IL_5DM6_085No text annotation
IL_5DM6_086No text annotation
IL_5DM6_087No text annotation
IL_5DM6_088No text annotation
IL_5DM6_127No text annotation

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
J3_5DM6_0121/X/30:31,
1/X/474:481,
1/X/509:510		No text annotation
geometric
J3_7A0S_001
J3_60031.2
J3_5DM6_0131/X/30:31,
1/X/474:484,
1/X/496:510		No text annotation
homologous
J3_7A0S_015
J3_92134.2
J3_5DM6_0141/X/32:35,
1/X/445:461,
1/X/468:473		No text annotation
homologous
J3_7A0S_016
J3_30040.2
J3_5DM6_0191/X/56:57,
1/X/70:76,
1/X/110:114		No text annotation
homologous
J3_5J7L_037
J3_35667.2
J3_5DM6_0021/X/683:689,
1/X/773:775,
1/X/791:794		No text annotation
homologous
J3_7RQB_004
NA
J3_5DM6_0031/X/698:701,
1/X/731:736,
1/X/760:763		No text annotation
J3_5DM6_0201/X/1055:1057,
1/X/1081:1091,
1/X/1100:1104		No text annotation
J3_5DM6_0051/X/1298:1303,
1/X/1625:1626,
1/X/1639:1642		No text annotation
homologous
J3_7A0S_006
J3_32852.6
J3_5DM6_0061/X/1306:1309,
1/X/1605:1611,
1/X/1620:1622		No text annotation
homologous
J3_7A0S_007
J3_71677.1
J3_5DM6_0211/X/1344:1350,
1/X/1381:1385,
1/X/1402:1403		No text annotation
homologous
J3_7A0S_018
J3_31965.2
J3_5DM6_0161/X/1424:1429,
1/X/1564:1565,
1/X/1568:1574		No text annotation
homologous
J3_7A0S_019
J3_34864.2
J3_5DM6_0071/X/2091:2093,
1/X/2196:2200,
1/X/2223:2228		No text annotation
homologous
J3_7A0S_009
J3_89368.5
J3_5DM6_0221/X/2282:2284,
1/X/2384:2395,
1/X/2421:2427		No text annotation
homologous
J3_7A0S_020
J3_20992.1
J3_5DM6_0081/X/2295:2297,
1/X/2321:2324,
1/X/2331:2337		No text annotation
J3_5DM6_0091/X/2517:2520,
1/X/2545:2547,
1/X/2561:2567		No text annotation
homologous
J3_7A0S_011
J3_32601.5
J3_5DM6_0101/X/2789:2791,
1/X/2801:2811,
1/X/2889:2893		No text annotation
homologous
J3_7A0S_012
J3_20574.1
J3_5DM6_0181/X/2814:2815,
1/X/2831:2836,
1/X/2882:2886		No text annotation
homologous
J3_7A0S_013
J3_76911.2
J3_5DM6_0231/Y/12:18,
1/Y/70:71,
1/Y/110:113		No text annotation
homologous
J3_7A0S_021
J3_47324.1
J4_5DM6_0011/X/297:301,
1/X/316:319,
1/X/323:325,
1/X/337:341		No text annotation
homologous
J4_7A0S_002
J4_71729.5
J4_5DM6_0021/X/600:603,
1/X/624:628,
1/X/635:639,
1/X/648:656		No text annotation
homologous
J4_4WF9_003
J4_60168.1
J4_5DM6_0031/X/1270:1276,
1/X/1294:1295,
1/X/1645:1648,
1/X/2009:2010		No text annotation
homologous
J4_7A0S_004
J4_64571.5
J4_5DM6_0041/X/1310:1314,
1/X/1338:1343,
1/X/1404:1405,
1/X/1597:1604		No text annotation
homologous
J4_7A0S_005
J4_69051.6
J4_5DM6_0051/X/1313:1314,
1/X/1338:1343,
1/X/1404:1405,
1/X/1597:1603		No text annotation
homologous
J4_7A0S_006
J4_10313.5
J4_5DM6_0061/X/1443:1445,
1/X/1466:1467,
1/X/1525:1529,
1/X/1542:1547		No text annotation
homologous
J4_7A0S_007
J4_91813.1
J4_5DM6_0071/X/1772:1776,
1/X/1788:1792,
1/X/1827:1830,
1/X/1975:1979		No text annotation
homologous
J4_5J7L_025
J4_61477.5
J4_5DM6_0081/X/1833:1835,
1/X/1905:1908,
1/X/1922:1933,
1/X/1967:1972		No text annotation
J4_5DM6_0091/X/2285:2289,
1/X/2343:2347,
1/X/2370:2372,
1/X/2381:2383		No text annotation
homologous
J4_4WF9_008
J4_04930.6
J4_5DM6_0101/X/2643:2646,
1/X/2674:2676,
1/X/2731:2736,
1/X/2768:2771		No text annotation
homologous
J4_7A0S_010
J4_54165.1
J5_5DM6_0011/X/47:54,
1/X/116:121,
1/X/130:131,
1/X/144:145,
1/X/156:157		No text annotation
homologous
J5_7A0S_001
J5_68783.1
J5_5DM6_0021/X/531:533,
1/X/560:564,
1/X/577:579,
1/X/1261:1262,
1/X/2017:2018		No text annotation
homologous
J5_9DFE_003
J5_43153.5
J5_5DM6_0031/X/584:589,
1/X/668:671,
1/X/809:812,
1/X/1195:1196,
1/X/1250:1256		No text annotation
homologous
J5_7A0S_004
J5_74302.5
J5_5DM6_0041/X/1674:1682,
1/X/1726:1727,
1/X/1745:1746,
1/X/1750:1758,
1/X/1988:1990		No text annotation
homologous
J5_7A0S_005
J5_62523.6
J5_5DM6_0071/X/2057:2064,
1/X/2446:2453,
1/X/2500:2507,
1/X/2582:2588,
1/X/2606:2611		No text annotation
J5_5DM6_0061/X/2074:2077,
1/X/2243:2246,
1/X/2258:2259,
1/X/2281:2282,
1/X/2427:2435		No text annotation
homologous
J5_7A0S_007
J5_39529.1
J6_5DM6_0011/X/45:46,
1/X/158:162,
1/X/186:196,
1/X/203:207,
1/X/234:238,
1/X/426:433		No text annotation
J6_5DM6_0031/X/2074:2077,
1/X/2243:2246,
1/X/2258:2259,
1/X/2281:2284,
1/X/2384:2395,
1/X/2421:2435		No text annotation
J6_5DM6_0021/X/2074:2077,
1/X/2243:2246,
1/X/2258:2259,
1/X/2281:2285,
1/X/2383:2395,
1/X/2421:2435		No text annotation
J7_5DM6_0011/X/8:15,
1/X/525:531,
1/X/2018:2023,
1/X/2040:2043,
1/X/2625:2630,
1/X/2788:2789,
1/X/2893:2894		No text annotation
J7_5DM6_0021/X/817:822,
1/X/835:836,
1/X/943:946,
1/X/971:976,
1/X/987:991,
1/X/1163:1164,
1/X/1185:1190		No text annotation

Problematic loops

#loop idProblemSequence
J3_5DM6_001No text annotation
J3_5DM6_004No text annotation
J3_5DM6_015No text annotation
J3_5DM6_017No text annotation
J3_5DM6_011No text annotation
J5_5DM6_005No text annotation

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