4V6Z Internal, Hairpin and 3-way Junction Loop Motifs
Valid loops
| # | loop id | location | annotation (mapped to, source) | motif group (similar to) |
|---|---|---|---|---|
| 1/A1/13:22 | NA | NA | ||
| 1/A1/31:39 | NA | NA | ||
| 1/A1/53:61 | NA | NA | ||
| 1/A3/13:23 | NA | NA | ||
| 1/A3/32:40 | NA | NA | ||
| 1/A3/54:62 | NA | NA | ||
| 1/AA/12:22 | NA | NA | ||
| 1/AA/83:86 | NA | NA | ||
| 1/AA/158:163 | NA | NA | ||
| 1/AA/186:191 | NA | NA | ||
| 1/AA/207:212 | NA | NA | ||
| 1/AA/259:267 | NA | NA | ||
| 1/AA/296:301 | NA | NA | ||
| 1/AA/320:333 | NA | NA | ||
| 1/AA/342:347 | NA | NA | ||
| 1/AA/379:384 | NA | NA | ||
| 1/AA/419:424 | NA | NA | ||
| 1/AA/462:470 | NA | NA | ||
| 1/AA/521:528 | NA | NA | ||
| 1/AA/617:623 | NA | NA | ||
| 1/AA/689:698 | NA | NA | ||
| 1/AA/726:731 | NA | NA | ||
| 1/AA/786:796 | NA | NA | ||
| 1/AA/840:846 | NA | NA | ||
| 1/AA/862:867 | NA | NA | ||
| 1/AA/897:902 | NA | NA | ||
| 1/AA/963:972 | NA | NA | ||
| 1/AA/1012:1017 | NA | NA | ||
| 1/AA/1027:1034 | NA | NA | ||
| 1/AA/1076:1081 | NA | NA | ||
| 1/AA/1089:1096 | NA | NA | ||
| 1/AA/1134:1140 | NA | NA | ||
| 1/AA/1165:1171 | NA | NA | ||
| 1/AA/1265:1270 | NA | NA | ||
| 1/AA/1314:1323 | NA | NA | ||
| 1/AA/1356:1366 | NA | NA | ||
| 1/AA/1449:1454 | NA | NA | ||
| 1/AA/1515:1520 | NA | NA | ||
| 1/BA/59:68 | NA | NA | ||
| 1/BA/87:95 | NA | NA | ||
| 1/BA/123:128 | NA | NA | ||
| 1/BA/137:142 | NA | NA | ||
| 1/BA/158:168 | NA | NA | ||
| 1/BA/194:201 | NA | NA | ||
| 1/BA/225:230 | NA | NA | ||
| 1/BA/246:252 | NA | NA | ||
| 1/BA/305:312 | NA | NA | ||
| 1/BA/319:323 | NA | NA | ||
| 1/BA/327:335 | NA | NA | ||
| 1/BA/382:392 | NA | NA | ||
| 1/BA/410:417 | NA | NA | ||
| 1/BA/462:467 | NA | NA | ||
| 1/BA/487:493 | NA | NA | ||
| 1/BA/543:550 | NA | NA | ||
| 1/BA/566:575 | NA | NA | ||
| 1/BA/611:617 | NA | NA | ||
| 1/BA/629:634 | NA | NA | ||
| 1/BA/640:648 | NA | NA | ||
| 1/BA/712:719 | NA | NA | ||
| 1/BA/744:753 | NA | NA | ||
| 1/BA/779:785 | NA | NA | ||
| 1/BA/826:831 | NA | NA | ||
| 1/BA/954:963 | NA | NA | ||
| 1/BA/978:985 | NA | NA | ||
| 1/BA/1064:1074 | NA | NA | ||
| 1/BA/1092:1099 | NA | NA | ||
| 1/BA/1172:1177 | NA | NA | ||
| 1/BA/1222:1227 | NA | NA | ||
| 1/BA/1281:1289 | NA | NA | ||
| 1/BA/1324:1330 | NA | NA | ||
| 1/BA/1363:1368 | NA | NA | ||
| 1/BA/1389:1398 | NA | NA | ||
| 1/BA/1450:1461 | NA | NA | ||
| 1/BA/1492:1498 | NA | NA | ||
| 1/BA/1533:1538 | NA | NA | ||
| 1/BA/1565:1568 | NA | NA | ||
| 1/BA/1612:1619 | NA | NA | ||
| 1/BA/1630:1636 | NA | NA | ||
| 1/BA/1691:1696 | NA | NA | ||
| 1/BA/1728:1731 | NA | NA | ||
| 1/BA/1752:1756 | NA | NA | ||
| 1/BA/1777:1787 | NA | NA | ||
| 1/BA/1806:1811 | NA | NA | ||
| 1/BA/1868:1873 | NA | NA | ||
| 1/BA/1910:1920 | NA | NA | ||
| 1/BA/1949:1957 | NA | NA | ||
| 1/BA/2027:2036 | NA | NA | ||
| 1/BA/2143:2148 | NA | NA | ||
| 1/BA/2209:2215 | NA | NA | ||
| 1/BA/2248:2256 | NA | NA | ||
| 1/BA/2264:2276 | NA | NA | ||
| 1/BA/2303:2313 | NA | NA | ||
| 1/BA/2324:2331 | NA | NA | ||
| 1/BA/2356:2361 | NA | NA | ||
| 1/BA/2374:2379 | NA | NA | ||
| 1/BA/2404:2413 | NA | NA | ||
| 1/BA/2471:2479 | NA | NA | ||
| 1/BA/2528:2535 | NA | NA | ||
| 1/BA/2551:2557 | NA | NA | ||
| 1/BA/2594:2599 | NA | NA | ||
| 1/BA/2658:2663 | NA | NA | ||
| 1/BA/2701:2706 | NA | NA | ||
| 1/BA/2745:2759 | NA | NA | ||
| 1/BA/2795:2801 | NA | NA | ||
| 1/BA/2819:2827 | NA | NA | ||
| 1/BA/2856:2861 | NA | NA | ||
| 1/BB/38:44 | NA | NA | ||
| 1/BB/86:90 | NA | NA |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_4V6Z_063 | NA |
Valid loops
| # | loop id | location | annotation (mapped to, source) | motif group (similar to) |
|---|---|---|---|---|
| 1/AA/28:32, 1/AA/552:555 | NA | NA | ||
| 1/AA/44:45, 1/AA/396:398 | NA | NA | ||
| 1/AA/47:52, 1/AA/359:361 | NA | NA | ||
| 1/AA/54:56, 1/AA/356:357 | NA | NA | ||
| 1/AA/63:66, 1/AA/103:104 | NA | NA | ||
| 1/AA/67:69, 1/AA/99:102 | NA | NA | ||
| 1/AA/70:73, 1/AA/97:98 | NA | NA | ||
| 1/AA/75:76, 1/AA/93:95 | NA | NA | ||
| 1/AA/128:131, 1/AA/231:233 | NA | NA | ||
| 1/AA/132:136, 1/AA/227:230 | NA | NA | ||
| 1/AA/144:146, 1/AA/176:178 | NA | NA | ||
| 1/AA/147:153, 1/AA/168:175 | NA | NA | ||
| 1/AA/203:206, 1/AA/213:214 | NA | NA | ||
| 1/AA/242:247, 1/AA/277:284 | NA | NA | ||
| 1/AA/249:253, 1/AA/273:275 | NA | NA | ||
| 1/AA/291:295, 1/AA/302:309 | NA | NA | ||
| 1/AA/367:369, 1/AA/392:393 | NA | NA | ||
| 1/AA/371:375, 1/AA/389:390 | NA | NA | ||
| 1/AA/375:376, 1/AA/387:389 | NA | NA | ||
| 1/AA/409:416, 1/AA/427:433 | NA | NA | ||
| 1/AA/440:442, 1/AA/492:497 | NA | NA | ||
| 1/AA/446:450, 1/AA/483:488 | NA | NA | ||
| 1/AA/450:455, 1/AA/477:483 | NA | NA | ||
| 1/AA/504:511, 1/AA/540:541 | NA | NA | ||
| 1/AA/515:521, 1/AA/528:536 | NA | NA | ||
| 1/AA/569:575, 1/AA/880:881 | NA | NA | ||
| 1/AA/580:584, 1/AA/757:761 | NA | NA | ||
| 1/AA/594:596, 1/AA/644:645 | NA | NA | ||
| 1/AA/597:598, 1/AA/640:643 | NA | NA | ||
| 1/AA/605:613, 1/AA/627:633 | NA | NA | ||
| 1/AA/654:655, 1/AA/751:754 | NA | NA | ||
| 1/AA/659:660, 1/AA/745:747 | NA | NA | ||
| 1/AA/661:666, 1/AA/740:744 | NA | NA | ||
| 1/AA/673:677, 1/AA/713:717 | NA | NA | ||
| 1/AA/684:688, 1/AA/699:706 | NA | NA | ||
| 1/AA/774:778, 1/AA/804:805 | NA | NA | ||
| 1/AA/779:783, 1/AA/799:803 | NA | NA | ||
| 1/AA/831:833, 1/AA/853:855 | NA | NA | ||
| 1/AA/887:894, 1/AA/905:910 | NA | NA | ||
| 1/AA/922:923, 1/AA/1393:1395 | NA | NA | ||
| 1/AA/923:927, 1/AA/1390:1393 | NA | NA | ||
| 1/AA/933:935, 1/AA/1380:1384 | NA | NA | ||
| 1/AA/953:954, 1/AA/1226:1228 | NA | NA | ||
| 1/AA/993:999, 1/AA/1041:1045 | NA | NA | ||
| 1/AA/1048:1050, 1/AA/1208:1209 | NA | NA | ||
| 1/AA/1052:1056, 1/AA/1204:1206 | NA | NA | ||
| 1/AA/1057:1058, 1/AA/1199:1203 | NA | NA | ||
| 1/AA/1059:1063, 1/AA/1193:1198 | NA | NA | ||
| 1/AA/1114:1116, 1/AA/1184:1186 | NA | NA | ||
| 1/AA/1124:1128, 1/AA/1144:1149 | NA | NA | ||
| 1/AA/1129:1132, 1/AA/1142:1143 | NA | NA | ||
| 1/AA/1158:1161, 1/AA/1175:1181 | NA | NA | ||
| 1/AA/1247:1253, 1/AA/1284:1290 | NA | NA | ||
| 1/AA/1255:1258, 1/AA/1277:1282 | NA | NA | ||
| 1/AA/1259:1263, 1/AA/1272:1276 | NA | NA | ||
| 1/AA/1399:1401, 1/AA/1501:1504 | NA | NA | ||
| 1/AA/1401:1404, 1/AA/1497:1501 | NA | NA | ||
| 1/AA/1405:1407, 1/AA/1494:1496 | NA | NA | ||
| 1/AA/1407:1410, 1/AA/1490:1494 | NA | NA | ||
| 1/AA/1412:1415, 1/AA/1485:1488 | NA | NA | ||
| 1/AA/1416:1420, 1/AA/1480:1484 | NA | NA | ||
| 1/AA/1429:1435, 1/AA/1466:1471 | NA | NA | ||
| 1/AA/1439:1442, 1/AA/1460:1462 | NA | NA | ||
| 1/AA/1443:1448, 1/AA/1455:1459 | NA | NA | ||
| 1/BA/36:37, 1/BA/442:444 | NA | NA | ||
| 1/BA/43:44, 1/BA/434:436 | NA | NA | ||
| 1/BA/81:85, 1/BA/97:105 | NA | NA | ||
| 1/BA/188:194, 1/BA/201:208 | NA | NA | ||
| 1/BA/239:245, 1/BA/253:258 | NA | NA | ||
| 1/BA/269:271, 1/BA/366:370 | NA | NA | ||
| 1/BA/274:281, 1/BA/359:363 | NA | NA | ||
| 1/BA/293:295, 1/BA/343:347 | NA | NA | ||
| 1/BA/481:484, 1/BA/496:509 | NA | NA | ||
| 1/BA/536:539, 1/BA/554:557 | NA | NA | ||
| 1/BA/564:566, 1/BA/575:577 | NA | NA | ||
| 1/BA/606:610, 1/BA/618:622 | NA | NA | ||
| 1/BA/672:674, 1/BA/806:808 | NA | NA | ||
| 1/BA/674:678, 1/BA/799:806 | NA | NA | ||
| 1/BA/697:698, 1/BA/763:765 | NA | NA | ||
| 1/BA/702:703, 1/BA/728:730 | NA | NA | ||
| 1/BA/703:707, 1/BA/724:728 | NA | NA | ||
| 1/BA/737:740, 1/BA/757:759 | NA | NA | ||
| 1/BA/775:777, 1/BA/787:791 | NA | NA | ||
| 1/BA/844:848, 1/BA/930:934 | NA | NA | ||
| 1/BA/849:851, 1/BA/926:929 | NA | NA | ||
| 1/BA/856:862, 1/BA/915:921 | NA | NA | ||
| 1/BA/862:863, 1/BA/913:915 | NA | NA | ||
| 1/BA/864:868, 1/BA/909:912 | NA | NA | ||
| 1/BA/870:872, 1/BA/905:907 | NA | NA | ||
| 1/BA/875:879, 1/BA/898:902 | NA | NA | ||
| 1/BA/880:882, 1/BA/894:897 | NA | NA | ||
| 1/BA/994:996, 1/BA/1159:1160 | NA | NA | ||
| 1/BA/998:1002, 1/BA/1153:1157 | NA | NA | ||
| 1/BA/1004:1011, 1/BA/1150:1151 | NA | NA | ||
| 1/BA/1011:1013, 1/BA/1149:1150 | NA | NA | ||
| 1/BA/1018:1024, 1/BA/1140:1144 | NA | NA | ||
| 1/BA/1024:1030, 1/BA/1124:1140 | NA | NA | ||
| 1/BA/1031:1034, 1/BA/1121:1123 | NA | NA | ||
| 1/BA/1038:1041, 1/BA/1114:1117 | NA | NA | ||
| 1/BA/1059:1062, 1/BA/1076:1079 | NA | NA | ||
| 1/BA/1087:1090, 1/BA/1101:1102 | NA | NA | ||
| 1/BA/1196:1198, 1/BA/1247:1250 | NA | NA | ||
| 1/BA/1202:1206, 1/BA/1240:1243 | NA | NA | ||
| 1/BA/1208:1215, 1/BA/1234:1238 | NA | NA | ||
| 1/BA/1262:1269, 1/BA/2011:2017 | NA | NA | ||
| 1/BA/1309:1313, 1/BA/1603:1605 | NA | NA | ||
| 1/BA/1319:1323, 1/BA/1331:1333 | NA | NA | ||
| 1/BA/1351:1355, 1/BA/1376:1380 | NA | NA | ||
| 1/BA/1357:1361, 1/BA/1370:1374 | NA | NA | ||
| 1/BA/1415:1416, 1/BA/1582:1587 | NA | NA | ||
| 1/BA/1417:1421, 1/BA/1577:1581 | NA | NA | ||
| 1/BA/1432:1435, 1/BA/1557:1561 | NA | NA | ||
| 1/BA/1437:1440, 1/BA/1551:1555 | NA | NA | ||
| 1/BA/1468:1472, 1/BA/1519:1524 | NA | NA | ||
| 1/BA/1474:1478, 1/BA/1513:1517 | NA | NA | ||
| 1/BA/1481:1482, 1/BA/1507:1510 | NA | NA | ||
| 1/BA/1488:1491, 1/BA/1499:1501 | NA | NA | ||
| 1/BA/1526:1529, 1/BA/1542:1546 | NA | NA | ||
| 1/BA/1651:1656, 1/BA/2004:2006 | NA | NA | ||
| 1/BA/1663:1665, 1/BA/1995:1997 | NA | NA | ||
| 1/BA/1666:1669, 1/BA/1993:1994 | NA | NA | ||
| 1/BA/1669:1674, 1/BA/1990:1993 | NA | NA | ||
| 1/BA/1686:1691, 1/BA/1696:1702 | NA | NA | ||
| 1/BA/1712:1718, 1/BA/1742:1746 | NA | NA | ||
| 1/BA/1720:1724, 1/BA/1736:1740 | NA | NA | ||
| 1/BA/1727:1728, 1/BA/1731:1733 | NA | NA | ||
| 1/BA/1770:1771, 1/BA/1980:1982 | NA | NA | ||
| 1/BA/1798:1804, 1/BA/1813:1821 | NA | NA | ||
| 1/BA/1837:1840, 1/BA/1902:1903 | NA | NA | ||
| 1/BA/1841:1842, 1/BA/1898:1901 | NA | NA | ||
| 1/BA/1846:1849, 1/BA/1893:1894 | NA | NA | ||
| 1/BA/1864:1867, 1/BA/1874:1878 | NA | NA | ||
| 1/BA/1933:1934, 1/BA/1964:1967 | NA | NA | ||
| 1/BA/1934:1945, 1/BA/1961:1964 | NA | NA | ||
| 1/BA/2050:2052, 1/BA/2617:2618 | NA | NA | ||
| 1/BA/2054:2056, 1/BA/2612:2615 | NA | NA | ||
| 1/BA/2067:2069, 1/BA/2442:2443 | NA | NA | ||
| 1/BA/2070:2071, 1/BA/2438:2441 | NA | NA | ||
| 1/BA/2081:2083, 1/BA/2236:2239 | NA | NA | ||
| 1/BA/2085:2087, 1/BA/2232:2234 | NA | NA | ||
| 1/BA/2101:2106, 1/BA/2183:2188 | NA | NA | ||
| 1/BA/2108:2110, 1/BA/2179:2181 | NA | NA | ||
| 1/BA/2202:2204, 1/BA/2220:2221 | NA | NA | ||
| 1/BA/2350:2353, 1/BA/2364:2367 | NA | NA | ||
| 1/BA/2401:2403, 1/BA/2414:2415 | NA | NA | ||
| 1/BA/2454:2455, 1/BA/2496:2498 | NA | NA | ||
| 1/BA/2457:2459, 1/BA/2493:2494 | NA | NA | ||
| 1/BA/2459:2461, 1/BA/2489:2493 | NA | NA | ||
| 1/BA/2466:2470, 1/BA/2480:2484 | NA | NA | ||
| 1/BA/2507:2508, 1/BA/2580:2582 | NA | NA | ||
| 1/BA/2509:2512, 1/BA/2574:2579 | NA | NA | ||
| 1/BA/2512:2513, 1/BA/2571:2574 | NA | NA | ||
| 1/BA/2522:2523, 1/BA/2540:2543 | NA | NA | ||
| 1/BA/2591:2592, 1/BA/2601:2603 | NA | NA | ||
| 1/BA/2636:2640, 1/BA/2774:2782 | NA | NA | ||
| 1/BA/2652:2658, 1/BA/2663:2668 | NA | NA | ||
| 1/BA/2680:2684, 1/BA/2725:2727 | NA | NA | ||
| 1/BA/2687:2691, 1/BA/2718:2722 | NA | NA | ||
| 1/BA/2695:2696, 1/BA/2711:2714 | NA | NA | ||
| 1/BA/2737:2742, 1/BA/2762:2767 | NA | NA | ||
| 1/BA/2806:2811, 1/BA/2889:2892 | NA | NA | ||
| 1/BA/2838:2839, 1/BA/2878:2880 | NA | NA | ||
| 1/BA/2843:2846, 1/BA/2870:2874 | NA | NA | ||
| 1/BA/2847:2853, 1/BA/2864:2869 | NA | NA | ||
| 1/BB/17:18, 1/BB/65:67 | NA | NA | ||
| 1/BB/23:28, 1/BB/56:60 | NA | NA | ||
| 1/BB/30:31, 1/BB/51:54 | NA | NA | ||
| 1/BB/34:38, 1/BB/44:48 | NA | NA | ||
| 1/BB/71:79, 1/BB/97:105 | NA | NA |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_4V6Z_100 | NA | ||
| IL_4V6Z_144 | NA | ||
| IL_4V6Z_145 | NA | ||
| IL_4V6Z_146 | NA |
Valid loops
| # | loop id | location | annotation (mapped to, source) | motif group (similar to) |
|---|---|---|---|---|
| 1/AA/46:47, 1/AA/361:367, 1/AA/393:395 | NA | NA | ||
| 1/AA/586:588, 1/AA/651:654, 1/AA/754:755 | NA | NA | ||
| 1/AA/671:673, 1/AA/717:725, 1/AA/732:735 | NA | NA | ||
| 1/AA/826:829, 1/AA/857:861, 1/AA/868:874 | NA | NA | ||
| 1/AA/943:946, 1/AA/1235:1237, 1/AA/1337:1340 | NA | NA | ||
| 1/AA/955:962, 1/AA/973:984, 1/AA/1221:1225 | NA | NA | ||
| 1/AA/990:993, 1/AA/1045:1047, 1/AA/1210:1215 | NA | NA | ||
| 1/AA/1003:1006, 1/AA/1023:1027, 1/AA/1034:1037 | NA | NA | ||
| 1/AA/1063:1068, 1/AA/1107:1114, 1/AA/1186:1193 | NA | NA | ||
| 1/AA/1073:1074, 1/AA/1083:1087, 1/AA/1098:1102 | NA | NA | ||
| 1/AA/1116:1118, 1/AA/1155:1158, 1/AA/1181:1184 | NA | NA | ||
| 1/BA/56:57, 1/BA/70:77, 1/BA/109:114 | NA | NA | ||
| 1/BA/683:689, 1/BA/773:775, 1/BA/791:794 | NA | NA | ||
| 1/BA/698:700, 1/BA/732:736, 1/BA/760:763 | NA | NA | ||
| 1/BA/1055:1057, 1/BA/1081:1087, 1/BA/1102:1104 | NA | NA | ||
| 1/BA/1298:1303, 1/BA/1625:1627, 1/BA/1639:1642 | NA | NA | ||
| 1/BA/1306:1309, 1/BA/1605:1611, 1/BA/1620:1622 | NA | NA | ||
| 1/BA/2091:2093, 1/BA/2196:2200, 1/BA/2223:2228 | NA | NA | ||
| 1/BA/2295:2299, 1/BA/2317:2323, 1/BA/2332:2337 | NA | NA | ||
| 1/BA/2517:2520, 1/BA/2545:2547, 1/BA/2561:2567 | NA | NA | ||
| 1/BA/2789:2791, 1/BA/2805:2806, 1/BA/2892:2894 | NA | NA | ||
| 1/BA/2812:2815, 1/BA/2831:2836, 1/BA/2882:2888 | NA | NA | ||
| 1/BB/10:16, 1/BB/68:70, 1/BB/106:110 | NA | NA |
Problematic loops
No problematic loops
Coloring options: