Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
HL_4V8A_0011/AA/59:68No text annotation
homologous
HL_7RQB_001
NA
HL_4V8A_0021/AA/87:95No text annotation
homologous
HL_7RQB_002
NA
HL_4V8A_0031/AA/123:128No text annotation
homologous
HL_7RQB_003
NA
HL_4V8A_0041/AA/139:142ANo text annotation
homologous
HL_7RQB_004
NA
HL_4V8A_0051/AA/194:201No text annotation
geometric
HL_5J7L_139
HL_30068.2
HL_4V8A_0061/AA/225:230No text annotation
homologous
HL_7RQB_007
NA
HL_4V8A_0071/AA/246:252No text annotation
homologous
HL_7RQB_008
NA
HL_4V8A_0081/AA/271J:271MNo text annotation
geometric
HL_7RQB_009
NA
HL_4V8A_0091/AA/305:312No text annotation
homologous
HL_7RQB_010
NA
HL_4V8A_0101/AA/319:323No text annotation
homologous
HL_7RQB_011
NA
HL_4V8A_0111/AA/327:335T-loop with unstacked turn
homologous
HL_7RQB_012
NA
HL_4V8A_0121/AA/382:392No text annotation
homologous
HL_7RQB_013
NA
HL_4V8A_0131/AA/410:417No text annotation
homologous
HL_7RQB_014
NA
HL_4V8A_0141/AA/462:467GNRA
homologous
HL_5J7L_147
HL_37824.7
HL_4V8A_0151/AA/487:493GNRA
homologous
HL_4WF9_016
HL_37824.7
HL_4V8A_0171/AA/566:575No text annotation
geometric
HL_7RQB_018
NA
HL_4V8A_0181/AA/612:615No text annotation
homologous
HL_7RQB_019
NA
HL_4V8A_0191/AA/629:634GNRA
homologous
HL_7RQB_020
NA
HL_4V8A_0201/AA/641:647GNRA
homologous
HL_4WF9_021
HL_37824.7
HL_4V8A_0221/AA/712:719No text annotation
homologous
HL_7RQB_022
NA
HL_4V8A_0231/AA/744:753No text annotation
homologous
HL_7RQB_023
NA
HL_4V8A_0241/AA/779:785No text annotation
homologous
HL_7RQB_024
NA
HL_4V8A_0251/AA/826:831No text annotation
homologous
HL_4WF9_025
HL_55195.3
HL_4V8A_0261/AA/884:892No text annotation
homologous
HL_7RQB_026
NA
HL_4V8A_0271/AA/955:962GNRA
homologous
HL_7RQB_027
NA
HL_4V8A_0281/AA/978:985No text annotation
homologous
HL_7RQB_028
NA
HL_4V8A_2071/AA/1171:1178No text annotation
homologous
HL_9DFE_029
NA
HL_4V8A_0311/AA/1222:1227GNRA
homologous
HL_7RQB_032
NA
HL_4V8A_0321/AA/1281:1289No text annotation
homologous
HL_7RQB_033
NA
HL_4V8A_0331/AA/1324:1330No text annotation
homologous
HL_7RQB_034
NA
HL_4V8A_0341/AA/1363:1368GNRA
homologous
HL_7RQB_035
NA
HL_4V8A_0351/AA/1389:1398No text annotation
homologous
HL_7RQB_036
NA
HL_4V8A_0361/AA/1451:1459No text annotation
homologous
HL_7RQB_037
NA
HL_4V8A_0371/AA/1492:1498No text annotation
homologous
HL_7RQB_038
NA
HL_4V8A_0381/AA/1565:1568No text annotation
homologous
HL_7RQB_039
NA
HL_4V8A_0391/AA/1612:1619No text annotation
homologous
HL_7RQB_040
NA
HL_4V8A_0401/AA/1631:1635No text annotation
homologous
HL_7RQB_041
NA
HL_4V8A_0411/AA/1691:1696No text annotation
homologous
HL_7RQB_042
NA
HL_4V8A_0421/AA/1720:1742No text annotation
homologous
HL_7RQB_043
NA
HL_4V8A_0431/AA/1752:1756No text annotation
homologous
HL_7RQB_044
NA
HL_4V8A_0441/AA/1777:1787No text annotation
homologous
HL_5J7L_178
HL_01962.2
HL_4V8A_0451/AA/1806:1811GNRA
homologous
HL_7RQB_046
NA
HL_4V8A_0461/AA/1864:1878GNRA
homologous
HL_7RQB_047
NA
HL_4V8A_0471/AA/1910:1920No text annotation
HL_4V8A_0481/AA/1949:1957No text annotation
homologous
HL_7RQB_049
NA
HL_4V8A_0491/AA/2027:2036No text annotation
homologous
HL_7RQB_050
NA
HL_4V8A_0511/AA/2205:2219No text annotation
homologous
HL_7RQB_052
NA
HL_4V8A_0521/AA/2248:2256No text annotation
homologous
HL_4WF9_049
HL_85367.2
HL_4V8A_0531/AA/2264:2276No text annotation
homologous
HL_7RQB_054
NA
HL_4V8A_0541/AA/2303:2313No text annotation
homologous
HL_7RQB_055
NA
HL_4V8A_0551/AA/2324:2331Pseudoknot geometry
homologous
HL_7RQB_056
NA
HL_4V8A_0561/AA/2355:2362No text annotation
homologous
HL_7RQB_057
NA
HL_4V8A_0571/AA/2374:2379GNRA
homologous
HL_7RQB_058
NA
HL_4V8A_0581/AA/2404:2413No text annotation
homologous
HL_7RQB_059
NA
HL_4V8A_0591/AA/2471:2479No text annotation
homologous
HL_5J7L_193
HL_32735.2
HL_4V8A_0601/AA/2528:2535No text annotation
homologous
HL_7RQB_061
NA
HL_4V8A_0611/AA/2551:2557No text annotation
homologous
HL_4WF9_058
HL_30068.2
HL_4V8A_0621/AA/2594:2599GNRA
homologous
HL_7RQB_063
NA
HL_4V8A_0631/AA/2658:2663GNRA
homologous
HL_5J7L_197
HL_37824.7
HL_4V8A_0641/AA/2701:2706No text annotation
homologous
HL_7RQB_065
NA
HL_4V8A_0651/AA/2745:2759No text annotation
homologous
HL_7RQB_066
NA
HL_4V8A_0671/AA/2819:2827No text annotation
homologous
HL_7RQB_068
NA
HL_4V8A_0681/AA/2856:2861GNRA
homologous
HL_7RQB_069
NA
HL_4V8A_2081/AB/34:48No text annotation
homologous
HL_9DFE_067
HL_97756.2
HL_4V8A_0691/AB/38:44No text annotation
homologous
HL_7RQB_070
NA
HL_4V8A_0701/AB/86:91GNRA
homologous
HL_7RQB_071
NA
HL_4V8A_0711/BA/59:68No text annotation
homologous
HL_7RQB_001
NA
HL_4V8A_0721/BA/87:95No text annotation
homologous
HL_7RQB_002
NA
HL_4V8A_0731/BA/123:128No text annotation
homologous
HL_7RQB_003
NA
HL_4V8A_0741/BA/139:142ANo text annotation
homologous
HL_7RQB_004
NA
HL_4V8A_0751/BA/194:201No text annotation
geometric
HL_7A0S_006
HL_30068.2
HL_4V8A_0761/BA/225:230No text annotation
homologous
HL_7RQB_007
NA
HL_4V8A_0771/BA/246:252No text annotation
homologous
HL_7RQB_008
NA
HL_4V8A_0781/BA/271J:271MNo text annotation
geometric
HL_7RQB_009
NA
HL_4V8A_0791/BA/305:312No text annotation
homologous
HL_7RQB_010
NA
HL_4V8A_0801/BA/319:323No text annotation
homologous
HL_5J7L_143
HL_75660.5
HL_4V8A_0811/BA/327:335T-loop with unstacked turn
homologous
HL_7RQB_012
NA
HL_4V8A_0821/BA/382:392No text annotation
homologous
HL_7RQB_013
NA
HL_4V8A_0831/BA/410:417No text annotation
homologous
HL_7RQB_014
NA
HL_4V8A_0841/BA/462:467GNRA
homologous
HL_7RQB_015
NA
HL_4V8A_0851/BA/487:493GNRA
homologous
HL_7RQB_016
NA
HL_4V8A_0871/BA/566:575No text annotation
geometric
HL_7RQB_018
NA
HL_4V8A_0881/BA/612:615No text annotation
homologous
HL_7RQB_019
NA
HL_4V8A_0891/BA/629:634GNRA
homologous
HL_7RQB_020
NA
HL_4V8A_0901/BA/641:647GNRA
homologous
HL_4WF9_021
HL_37824.7
HL_4V8A_0911/BA/712:719No text annotation
homologous
HL_7RQB_022
NA
HL_4V8A_0921/BA/744:753No text annotation
homologous
HL_7RQB_023
NA
HL_4V8A_0931/BA/779:785No text annotation
homologous
HL_7RQB_024
NA
HL_4V8A_0941/BA/826:831No text annotation
homologous
HL_4WF9_025
HL_55195.3
HL_4V8A_0961/BA/955:962GNRA
homologous
HL_7RQB_027
NA
HL_4V8A_0971/BA/978:985No text annotation
homologous
HL_7RQB_028
NA
HL_4V8A_2091/BA/1171:1178No text annotation
homologous
HL_9DFE_029
NA
HL_4V8A_1001/BA/1222:1227GNRA
homologous
HL_7RQB_032
NA
HL_4V8A_1011/BA/1281:1289No text annotation
homologous
HL_7RQB_033
NA
HL_4V8A_1021/BA/1324:1330No text annotation
homologous
HL_7RQB_034
NA
HL_4V8A_1031/BA/1363:1368GNRA
homologous
HL_7RQB_035
NA
HL_4V8A_1041/BA/1389:1398No text annotation
homologous
HL_7RQB_036
NA
HL_4V8A_1051/BA/1451:1459No text annotation
geometric
HL_7RQB_037
NA
HL_4V8A_1061/BA/1492:1498No text annotation
homologous
HL_7RQB_038
NA
HL_4V8A_1071/BA/1565:1568Mini UNCG
homologous
HL_7A0S_039
HL_48778.2
HL_4V8A_1081/BA/1612:1619No text annotation
homologous
HL_7RQB_040
NA
HL_4V8A_1091/BA/1631:1635No text annotation
homologous
HL_7RQB_041
NA
HL_4V8A_1101/BA/1691:1696No text annotation
geometric
HL_7RQB_042
NA
HL_4V8A_1111/BA/1720:1742No text annotation
homologous
HL_7RQB_043
NA
HL_4V8A_1121/BA/1752:1756No text annotation
homologous
HL_7RQB_044
NA
HL_4V8A_1131/BA/1777:1787No text annotation
homologous
HL_5J7L_178
HL_01962.2
HL_4V8A_1141/BA/1806:1811GNRA
homologous
HL_7RQB_046
NA
HL_4V8A_1151/BA/1864:1878GNRA
homologous
HL_7RQB_047
NA
HL_4V8A_1161/BA/1910:1920No text annotation
HL_4V8A_1171/BA/1949:1957No text annotation
homologous
HL_7RQB_049
NA
HL_4V8A_1181/BA/2027:2036No text annotation
homologous
HL_7RQB_050
NA
HL_4V8A_1201/BA/2205:2219No text annotation
homologous
HL_7RQB_052
NA
HL_4V8A_1211/BA/2248:2256No text annotation
homologous
HL_4WF9_049
HL_85367.2
HL_4V8A_1221/BA/2264:2276No text annotation
homologous
HL_7RQB_054
NA
HL_4V8A_2101/BA/2304:2312No text annotation
homologous
HL_9DFE_198
HL_50860.2
HL_4V8A_1241/BA/2324:2331Pseudoknot geometry
homologous
HL_7RQB_056
NA
HL_4V8A_1251/BA/2355:2362No text annotation
homologous
HL_7RQB_057
NA
HL_4V8A_1261/BA/2374:2379GNRA
homologous
HL_7RQB_058
NA
HL_4V8A_1271/BA/2404:2413No text annotation
homologous
HL_7RQB_059
NA
HL_4V8A_1281/BA/2471:2479No text annotation
homologous
HL_5J7L_193
HL_32735.2
HL_4V8A_1291/BA/2528:2535No text annotation
homologous
HL_7RQB_061
NA
HL_4V8A_1301/BA/2551:2557No text annotation
homologous
HL_4WF9_058
HL_30068.2
HL_4V8A_1311/BA/2594:2599GNRA
homologous
HL_7RQB_063
NA
HL_4V8A_1321/BA/2658:2663GNRA
homologous
HL_7RQB_064
NA
HL_4V8A_1331/BA/2701:2706No text annotation
homologous
HL_7RQB_065
NA
HL_4V8A_1341/BA/2745:2759No text annotation
homologous
HL_7RQB_066
NA
HL_4V8A_1361/BA/2819:2827No text annotation
homologous
HL_7RQB_068
NA
HL_4V8A_1371/BA/2856:2861GNRA
homologous
HL_7RQB_069
NA
HL_4V8A_2031/BB/34:48No text annotation
homologous
HL_9DFE_067
HL_97756.2
HL_4V8A_1381/BB/38:44No text annotation
geometric
HL_7RQB_070
NA
HL_4V8A_1391/BB/86:91GNRA
homologous
HL_7RQB_071
NA
HL_4V8A_1401/CA/12:22No text annotation
homologous
HL_5J7L_001
HL_89881.5
HL_4V8A_1411/CA/158:163GNRA
homologous
HL_6CZR_074
NA
HL_4V8A_1421/CA/189C:189HNo text annotation
homologous
HL_4LFB_004
HL_48417.5
HL_4V8A_1441/CA/259:267GNRA related
homologous
HL_4LFB_006
HL_84299.4
HL_4V8A_1451/CA/296:301GNRA
homologous
HL_4LFB_007
HL_37824.7
HL_4V8A_1461/CA/320:333No text annotation
homologous
HL_4LFB_008
HL_81205.3
HL_4V8A_1471/CA/342:347UNCG
homologous
HL_6CZR_080
NA
HL_4V8A_1481/CA/379:384GNRA
homologous
HL_4LFB_010
HL_37824.7
HL_4V8A_1491/CA/419:424UNCG
homologous
HL_4LFB_011
HL_34617.5
HL_4V8A_1501/CA/458:473GNRA
homologous
HL_4LFB_012
HL_37824.7
HL_4V8A_1511/CA/522:527No text annotation
geometric
HL_5J7L_143
HL_75660.5
HL_4V8A_1521/CA/617:623No text annotation
homologous
HL_4LFB_014
HL_10453.3
HL_4V8A_1531/CA/689:698No text annotation
homologous
HL_5J7L_015
HL_75293.5
HL_4V8A_1541/CA/726:731GNRA
homologous
HL_4LFB_016
HL_37824.7
HL_4V8A_1551/CA/786:796No text annotation
homologous
HL_4LFB_017
HL_75293.5
HL_4V8A_1561/CA/838:848Mini UNCG
homologous
HL_6CZR_089
NA
HL_4V8A_1571/CA/862:867GNRA
homologous
HL_5J7L_019
HL_37824.7
HL_4V8A_1581/CA/897:902GNRA
homologous
HL_4LFB_020
HL_37824.7
HL_4V8A_1591/CA/963:972No text annotation
homologous
HL_4LFB_021
HL_50779.4
HL_4V8A_1601/CA/1012:1017GNRA
homologous
HL_4LFB_022
HL_37824.7
HL_4V8A_1611/CA/1076:1081GNRA
homologous
HL_6CZR_095
NA
HL_4V8A_1621/CA/1089:1096T-loop related
homologous
HL_5J7L_024
HL_77436.5
HL_4V8A_1631/CA/1134:1140No text annotation
homologous
HL_4LFB_026
HL_87954.2
HL_4V8A_1641/CA/1165:1171GNRA
homologous
HL_4LFB_027
HL_37824.7
HL_4V8A_1651/CA/1265:1270GNRA
homologous
HL_4LFB_028
HL_37824.7
HL_4V8A_1661/CA/1314:1323T-loop with 3 stacked bulged bases
homologous
HL_4LFB_029
HL_02887.3
HL_4V8A_1671/CA/1356:1366No text annotation
homologous
HL_4LFB_030
HL_06226.4
HL_4V8A_1681/CA/1445:1457No text annotation
homologous
HL_6CZR_102
NA
HL_4V8A_1691/CA/1515:1520GNRA
homologous
HL_4LFB_032
HL_37824.7
HL_4V8A_1701/DA/12:22No text annotation
homologous
HL_5J7L_001
HL_89881.5
HL_4V8A_1711/DA/158:163GNRA
homologous
HL_6CZR_074
NA
HL_4V8A_1721/DA/189C:189HNo text annotation
homologous
HL_4LFB_004
HL_48417.5
HL_4V8A_1731/DA/201:216Mini UNCG
homologous
HL_4LFB_005
HL_48778.2
HL_4V8A_1741/DA/259:267GNRA related
homologous
HL_4LFB_006
HL_84299.4
HL_4V8A_1751/DA/296:301GNRA
homologous
HL_4LFB_007
HL_37824.7
HL_4V8A_1761/DA/320:333No text annotation
homologous
HL_4LFB_008
HL_81205.3
HL_4V8A_1771/DA/342:347UNCG
homologous
HL_6CZR_080
NA
HL_4V8A_1781/DA/379:384GNRA
homologous
HL_4LFB_010
HL_37824.7
HL_4V8A_1791/DA/419:424UNCG
homologous
HL_4LFB_011
HL_34617.5
HL_4V8A_1801/DA/458:473GNRA
homologous
HL_4LFB_012
HL_37824.7
HL_4V8A_1811/DA/522:527No text annotation
geometric
HL_5J7L_143
HL_75660.5
HL_4V8A_1821/DA/617:623No text annotation
homologous
HL_4LFB_014
HL_10453.3
HL_4V8A_1831/DA/689:698No text annotation
homologous
HL_6CZR_086
NA
HL_4V8A_1841/DA/726:731GNRA
homologous
HL_4LFB_016
HL_37824.7
HL_4V8A_1851/DA/786:796No text annotation
homologous
HL_4LFB_017
HL_75293.5
HL_4V8A_1861/DA/838:848Mini UNCG
homologous
HL_6CZR_089
NA
HL_4V8A_1871/DA/862:867GNRA
homologous
HL_4LFB_019
HL_37824.7
HL_4V8A_1881/DA/897:902GNRA
homologous
HL_4LFB_020
HL_37824.7
HL_4V8A_1891/DA/963:972No text annotation
homologous
HL_4LFB_021
HL_50779.4
HL_4V8A_1911/DA/1076:1081GNRA
homologous
HL_4LFB_024
HL_37824.7
HL_4V8A_1921/DA/1089:1096T-loop related
homologous
HL_5J7L_024
HL_77436.5
HL_4V8A_1941/DA/1165:1171GNRA
homologous
HL_4LFB_027
HL_37824.7
HL_4V8A_1961/DA/1314:1323T-loop with 3 stacked bulged bases
homologous
HL_4LFB_029
HL_02887.3
HL_4V8A_1971/DA/1356:1366No text annotation
homologous
HL_4LFB_030
HL_06226.4
HL_4V8A_1981/DA/1445:1457No text annotation
homologous
HL_6CZR_102
NA
HL_4V8A_1991/DA/1515:1520GNRA
homologous
HL_4LFB_032
HL_37824.7

Problematic loops

#loop idProblemSequence
HL_4V8A_016No text annotation
HL_4V8A_021No text annotation
HL_4V8A_029No text annotation
HL_4V8A_030No text annotation
HL_4V8A_200No text annotation
HL_4V8A_050No text annotation
HL_4V8A_066No text annotation
HL_4V8A_201No text annotation
HL_4V8A_086No text annotation
HL_4V8A_095No text annotation
HL_4V8A_098No text annotation
HL_4V8A_099No text annotation
HL_4V8A_202No text annotation
HL_4V8A_119No text annotation
HL_4V8A_123No text annotation
HL_4V8A_135No text annotation
HL_4V8A_143Mini UNCG
HL_4V8A_204No text annotation
HL_4V8A_205No text annotation
HL_4V8A_206No text annotation
HL_4V8A_190GNRA
HL_4V8A_193No text annotation
HL_4V8A_195No text annotation

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
IL_4V8A_0011/AA/24:30,
1/AA/510:516
Triple sheared with non-canonical cWW
homologous
IL_7RQB_001
NA
IL_4V8A_0021/AA/36:37,
1/AA/442:444
Single bulged A
homologous
IL_7RQB_002
NA
IL_4V8A_0031/AA/42:43,
1/AA/434:436
Minor groove platform
homologous
IL_7RQB_003
NA
IL_4V8A_0041/AA/81:85,
1/AA/97:105
Kink-turn
homologous
IL_7RQB_004
NA
IL_4V8A_0051/AA/183:184,
1/AA/212:214
Single stack bend
homologous
IL_7RQB_005
NA
IL_4V8A_0061/AA/188:194,
1/AA/201:208
8x7 Sarcin-Ricin; G-bulge
homologous
IL_7RQB_006
NA
IL_4V8A_0071/AA/239:245,
1/AA/253:258
7x6 Sarcin-Ricin; G-bulge
homologous
IL_7RQB_007
NA
IL_4V8A_0081/AA/271I:271J,
1/AA/271M:271O
Single bulged U
homologous
IL_7RQB_008
NA
IL_4V8A_0091/AA/272D:272E,
1/AA/363E:364
Major groove platform
homologous
IL_7RQB_009
NA
IL_4V8A_0111/AA/280:284,
1/AA/357:360
tSH-tHW
homologous
IL_7RQB_011
NA
IL_4V8A_0121/AA/288:290,
1/AA/350:353
Isolated tHS basepair with bulges
homologous
IL_7RQB_012
NA
IL_4V8A_0131/AA/293:295,
1/AA/343:347
No text annotation
homologous
IL_7RQB_013
NA
IL_4V8A_0141/AA/481:484,
1/AA/496:509
No text annotation
homologous
IL_7RQB_014
NA
IL_4V8A_0151/AA/564:566,
1/AA/575:577
No text annotation
homologous
IL_7RQB_015
NA
IL_4V8A_0161/AA/606:610,
1/AA/618:622
AAA cross-strand stack
homologous
IL_7RQB_016
NA
IL_4V8A_0171/AA/672:674,
1/AA/806:808
Isolated non-canonical cWW pair
homologous
IL_5J7L_259
IL_87907.2
IL_4V8A_0181/AA/674:678,
1/AA/799:806
tHW-tHW cross-strand stack
geometric
IL_4WF9_021
IL_54041.2
IL_4V8A_0191/AA/697:698,
1/AA/763:765
Single bulged A
geometric
IL_7RQB_019
NA
IL_4V8A_0201/AA/702:703,
1/AA/728:730
Single bulged G
homologous
IL_7RQB_020
NA
IL_4V8A_0211/AA/703:707,
1/AA/724:728
Triple sheared
geometric
IL_7RQB_021
NA
IL_4V8A_0221/AA/738:741,
1/AA/756:758
Major groove platform with extra cWW
homologous
IL_7A0S_019
IL_51387.2
IL_4V8A_0231/AA/775:777,
1/AA/787:791
Multiple bulged bases
geometric
IL_7RQB_023
NA
IL_4V8A_0241/AA/837:838,
1/AA/940:942
Single stack bend
homologous
IL_5J7L_266
IL_90729.1
IL_4V8A_0251/AA/844:846,
1/AA/931:934
Intercalated cWW
geometric
IL_7RQB_025
NA
IL_4V8A_3481/AA/844:850,
1/AA/927:934
No text annotation
homologous
IL_9DFE_024
IL_68243.1
IL_4V8A_0261/AA/846:850,
1/AA/927:931
No text annotation
homologous
IL_7RQB_026
NA
IL_4V8A_0271/AA/858:862,
1/AA/915:919
5x5 Sarcin-Ricin with intercalated A; G-bulge
geometric
IL_7RQB_027
NA
IL_4V8A_0281/AA/862:863,
1/AA/913:915
Minor groove platform
homologous
IL_7RQB_028
NA
IL_4V8A_0291/AA/864:868,
1/AA/909:912
C-loop with bulged stacked A's
homologous
IL_7RQB_029
NA
IL_4V8A_0301/AA/870:872,
1/AA/905:907
Isolated cWS basepair
homologous
IL_7RQB_030
NA
IL_4V8A_0311/AA/875:877,
1/AA/899:902
Minor groove platform with extra cWW
homologous
IL_7RQB_031
NA
IL_4V8A_0321/AA/877:879,
1/AA/898:899
Minor groove platform
geometric
IL_7RQB_032
NA
IL_4V8A_0331/AA/880:881,
1/AA/895:897
Single bulged A
homologous
IL_7RQB_033
NA
IL_4V8A_0341/AA/952:954,
1/AA/963:965
No text annotation
homologous
IL_7RQB_034
NA
IL_4V8A_0351/AA/994:996,
1/AA/1159:1160
Single bulged C
homologous
IL_7RQB_035
NA
IL_4V8A_0361/AA/998:1002,
1/AA/1153:1157
UAA/GAN
homologous
IL_7RQB_036
NA
IL_4V8A_0371/AA/1004:1011,
1/AA/1150:1151
SSU/LSU pseudoknot
geometric
IL_7RQB_037
NA
IL_4V8A_0381/AA/1011:1013,
1/AA/1149:1150
Single bulged U
homologous
IL_7RQB_038
NA
IL_4V8A_0391/AA/1018:1024,
1/AA/1140:1144
Kink-turn related
geometric
IL_4WF9_039
IL_57188.5
IL_4V8A_0401/AA/1024:1030,
1/AA/1124:1140
No text annotation
geometric
IL_7RQB_040
NA
IL_4V8A_0411/AA/1031:1034,
1/AA/1121:1123
Isolated non-canonical cWW pair
homologous
IL_7RQB_041
NA
IL_4V8A_0421/AA/1196:1198,
1/AA/1247:1250
Isolated cWS basepair
homologous
IL_7RQB_045
NA
IL_4V8A_0431/AA/1202:1206,
1/AA/1240:1243
No text annotation
homologous
IL_7RQB_046
NA
IL_4V8A_0441/AA/1208:1215,
1/AA/1234:1238
Kink-turn
homologous
IL_7RQB_047
NA
IL_4V8A_0451/AA/1219:1221,
1/AA/1229:1230
Single bulged A
homologous
IL_7RQB_048
NA
IL_4V8A_0461/AA/1262:1269,
1/AA/2011:2017
8x7 Sarcin-Ricin; G-bulge
homologous
IL_7RQB_049
NA
IL_4V8A_0471/AA/1310:1313,
1/AA/1603:1604
Major groove platform; stack outside cWW
homologous
IL_7RQB_050
NA
IL_4V8A_0481/AA/1319:1323,
1/AA/1331:1333
C-loop
homologous
IL_7RQB_051
NA
IL_4V8A_0491/AA/1351:1355,
1/AA/1376:1380
UAA/GAN
homologous
IL_7RQB_052
NA
IL_4V8A_0501/AA/1357:1361,
1/AA/1370:1374
tSH-tHW-tHS
homologous
IL_7RQB_053
NA
IL_4V8A_0511/AA/1415:1416,
1/AA/1582:1587
No text annotation
homologous
IL_7RQB_054
NA
IL_4V8A_0521/AA/1417:1421,
1/AA/1577:1581
UAA/GAN
homologous
IL_7RQB_055
NA
IL_4V8A_0531/AA/1433:1435,
1/AA/1557:1560
Isolated tWW turn
homologous
IL_7RQB_056
NA
IL_4V8A_0541/AA/1437:1440,
1/AA/1551:1555
tSH-tHW
homologous
IL_7RQB_057
NA
IL_4V8A_0551/AA/1448:1450,
1/AA/1462:1463
Single stack bend
homologous
IL_7RQB_058
NA
IL_4V8A_0561/AA/1450A:1451,
1/AA/1459:1461
Single bulged A
geometric
IL_7RQB_059
NA
IL_4V8A_0571/AA/1469:1473,
1/AA/1518:1523
UAA/GAN
homologous
IL_7RQB_060
NA
IL_4V8A_0581/AA/1481:1482,
1/AA/1506:1510
No text annotation
homologous
IL_7RQB_061
NA
IL_4V8A_0591/AA/1488:1491,
1/AA/1499:1501
Isolated non-canonical cWW with bulges
geometric
IL_5ML7_010
IL_07785.1
IL_4V8A_0601/AA/1526:1529,
1/AA/1540:1546
No text annotation
homologous
IL_7RQB_063
NA
IL_4V8A_0611/AA/1651:1656,
1/AA/2004:2006
No text annotation
homologous
IL_7RQB_064
NA
IL_4V8A_0621/AA/1663:1665,
1/AA/1995:1997
Isolated tWW turn
homologous
IL_7RQB_065
NA
IL_4V8A_0631/AA/1666:1669,
1/AA/1993:1994
Major groove platform; stack outside cWW
homologous
IL_5J7L_306
IL_50694.7
IL_4V8A_3491/AA/1666:1674,
1/AA/1990:1994
No text annotation
homologous
IL_9DFE_066
IL_22854.4
IL_4V8A_0641/AA/1669:1674,
1/AA/1990:1993
Intercalated tWH
geometric
IL_7RQB_067
NA
IL_4V8A_0651/AA/1686:1691,
1/AA/1696:1702
tSH-tSH-tHH-tHS
geometric
IL_7RQB_068
NA
IL_4V8A_0661/AA/1770:1771,
1/AA/1980:1982
Single bulged A
homologous
IL_7RQB_069
NA
IL_4V8A_0671/AA/1798:1804,
1/AA/1813:1821
Kink-turn related
homologous
IL_7RQB_070
NA
IL_4V8A_0681/AA/1837:1840,
1/AA/1902:1903
Minor groove platform, major groove intercalation
homologous
IL_7RQB_071
NA
IL_4V8A_0691/AA/1841:1842,
1/AA/1898:1901
Major groove intercalation
homologous
IL_7RQB_072
NA
IL_4V8A_0701/AA/1846:1849,
1/AA/1893:1894
Minor groove platform
homologous
IL_7RQB_073
NA
IL_4V8A_0711/AA/1851:1855,
1/AA/1887:1891
UAA/GAN with extra pair
homologous
IL_7RQB_074
NA
IL_4V8A_0721/AA/1856:1860,
1/AA/1882:1886
Triple sheared
homologous
IL_7RQB_075
NA
IL_4V8A_0731/AA/1933:1934,
1/AA/1964:1967
Bulged stacked bases
geometric
IL_5J7L_318
IL_22551.4
IL_4V8A_0741/AA/1934:1945,
1/AA/1961:1964
No text annotation
homologous
IL_4WF9_077
IL_42218.2
IL_4V8A_0751/AA/2050:2052,
1/AA/2617:2618
Major groove platform
homologous
IL_7RQB_078
NA
IL_4V8A_0761/AA/2054:2057,
1/AA/2611:2615
No text annotation
homologous
IL_9DFE_079
IL_70335.1
IL_4V8A_0771/AA/2067:2069,
1/AA/2442:2443
Single bulged U
homologous
IL_4WF9_080
IL_89505.4
IL_4V8A_0781/AA/2070:2071,
1/AA/2438:2441
Minor groove platform
homologous
IL_4WF9_081
IL_51454.3
IL_4V8A_0791/AA/2081:2083,
1/AA/2236:2239
Isolated tHS basepair with bulges
homologous
IL_7RQB_082
NA
IL_4V8A_0801/AA/2085:2087,
1/AA/2232:2234
No text annotation
homologous
IL_7RQB_083
NA
IL_4V8A_0821/AA/2110:2120,
1/AA/2178:2179
No text annotation
geometric
IL_1MZP_002
IL_32056.1
IL_4V8A_0841/AA/2129:2136,
1/AA/2155:2159
No text annotation
homologous
IL_7RQB_087
NA
IL_4V8A_0851/AA/2297:2299,
1/AA/2317:2321
Isolated tHS basepair with bulges
homologous
IL_7RQB_088
NA
IL_4V8A_0861/AA/2350:2353,
1/AA/2364:2367
Double sheared
homologous
IL_7RQB_089
NA
IL_4V8A_0871/AA/2401:2403,
1/AA/2414:2415
Major groove platform
homologous
IL_7RQB_090
NA
IL_4V8A_0881/AA/2453:2454,
1/AA/2498:2500
Single stack bend
homologous
IL_7RQB_091
NA
IL_4V8A_0891/AA/2454:2455,
1/AA/2496:2498
Major groove platform
geometric
IL_7RQB_092
NA
IL_4V8A_0901/AA/2457:2459,
1/AA/2493:2494
Major groove platform
geometric
IL_4WF9_091
IL_48076.6
IL_4V8A_0911/AA/2459:2461,
1/AA/2489:2493
Major groove minor groove platform with extra cWW
homologous
IL_7RQB_094
NA
IL_4V8A_0921/AA/2466:2470,
1/AA/2480:2484
Triple sheared
homologous
IL_7RQB_095
NA
IL_4V8A_0931/AA/2507:2508,
1/AA/2580:2582
Major groove platform
homologous
IL_4WF9_094
IL_07039.3
IL_4V8A_0941/AA/2510:2512,
1/AA/2574:2578
Isolated non-canonical cWW with bulges
geometric
IL_7RQB_097
NA
IL_4V8A_0951/AA/2512:2513,
1/AA/2571:2574
Multiple bulged bases
homologous
IL_7RQB_098
NA
IL_4V8A_0961/AA/2522:2523,
1/AA/2540:2543
Major groove platform with intercalation
homologous
IL_7RQB_099
NA
IL_4V8A_0981/AA/2636:2640,
1/AA/2774:2782
tSH-tHS-tHW
homologous
IL_7RQB_102
NA
IL_4V8A_0991/AA/2652:2658,
1/AA/2663:2668
Sarcin-Ricin target in LSU H95; G-bulge
geometric
IL_7RQB_103
NA
IL_4V8A_1001/AA/2680:2684,
1/AA/2725:2727
C-loop
homologous
IL_7RQB_104
NA
IL_4V8A_1011/AA/2687:2691,
1/AA/2718:2722
No text annotation
homologous
IL_7RQB_105
NA
IL_4V8A_1021/AA/2695:2696,
1/AA/2711:2714
Multiple bulged bases
homologous
IL_7RQB_106
NA
IL_4V8A_1031/AA/2737:2742,
1/AA/2762:2767
UAA/GAN with extra cWW
homologous
IL_7RQB_107
NA
IL_4V8A_1041/AA/2838:2839,
1/AA/2878:2880
Single bulged C
homologous
IL_7RQB_108
NA
IL_4V8A_1051/AA/2843:2846,
1/AA/2870:2874
No text annotation
homologous
IL_7RQB_109
NA
IL_4V8A_1061/AA/2847:2852,
1/AA/2865:2869
tHS double platform
homologous
IL_7RQB_110
NA
IL_4V8A_1071/AB/17:18,
1/AB/65:67
Major groove intercalation
homologous
IL_7RQB_111
NA
IL_4V8A_1081/AB/23:28,
1/AB/56:60
No text annotation
geometric
IL_5J7L_356
IL_18472.4
IL_4V8A_3591/AB/30:31,
1/AB/51:54
Major groove minor groove platform; mini C-loop
homologous
IL_5J7L_357
IL_68140.4
IL_4V8A_1111/AB/34:38,
1/AB/44:48
Symmetric double minor groove platform
geometric
IL_7RQB_114
NA
IL_4V8A_1121/AB/71:79,
1/AB/98:106
Bacterial 5S Loop E
homologous
IL_7RQB_115
NA
IL_4V8A_1131/BA/24:30,
1/BA/510:516
Triple sheared with non-canonical cWW
homologous
IL_7RQB_001
NA
IL_4V8A_1141/BA/36:37,
1/BA/442:444
Single bulged A
homologous
IL_7RQB_002
NA
IL_4V8A_1151/BA/42:43,
1/BA/434:436
Minor groove platform
homologous
IL_7RQB_003
NA
IL_4V8A_1161/BA/81:85,
1/BA/97:105
Kink-turn
homologous
IL_7RQB_004
NA
IL_4V8A_1171/BA/183:184,
1/BA/212:214
Single stack bend
homologous
IL_7RQB_005
NA
IL_4V8A_1181/BA/188:194,
1/BA/201:208
8x7 Sarcin-Ricin; G-bulge
homologous
IL_7RQB_006
NA
IL_4V8A_1191/BA/239:245,
1/BA/253:258
7x6 Sarcin-Ricin; G-bulge
homologous
IL_7RQB_007
NA
IL_4V8A_1201/BA/271I:271J,
1/BA/271M:271O
Single bulged U
homologous
IL_7RQB_008
NA
IL_4V8A_1211/BA/272D:272E,
1/BA/363E:364
Major groove platform
homologous
IL_7RQB_009
NA
IL_4V8A_1231/BA/280:284,
1/BA/357:360
tSH-tHW
homologous
IL_7RQB_011
NA
IL_4V8A_1241/BA/288:290,
1/BA/350:353
Isolated tHS basepair with bulges
homologous
IL_7RQB_012
NA
IL_4V8A_1251/BA/293:295,
1/BA/343:347
No text annotation
homologous
IL_7RQB_013
NA
IL_4V8A_1261/BA/481:484,
1/BA/496:509
No text annotation
homologous
IL_7RQB_014
NA
IL_4V8A_1271/BA/564:566,
1/BA/575:577
No text annotation
homologous
IL_7RQB_015
NA
IL_4V8A_1281/BA/606:610,
1/BA/618:622
AAA cross-strand stack
homologous
IL_7RQB_016
NA
IL_4V8A_1291/BA/672:674,
1/BA/806:808
Isolated non-canonical cWW pair
geometric
IL_5J7L_259
IL_87907.2
IL_4V8A_1301/BA/674:678,
1/BA/799:806
tHW-tHW cross-strand stack
homologous
IL_4WF9_021
IL_54041.2
IL_4V8A_1311/BA/697:698,
1/BA/763:765
Single bulged A
homologous
IL_7RQB_019
NA
IL_4V8A_1321/BA/702:703,
1/BA/728:730
Single bulged G
homologous
IL_7RQB_020
NA
IL_4V8A_1331/BA/703:707,
1/BA/724:728
Triple sheared
geometric
IL_7RQB_021
NA
IL_4V8A_1341/BA/738:741,
1/BA/756:758
Major groove platform with extra cWW
homologous
IL_7RQB_022
NA
IL_4V8A_1351/BA/775:777,
1/BA/787:791
Multiple bulged bases
homologous
IL_7RQB_023
NA
IL_4V8A_1361/BA/837:838,
1/BA/940:942
Single stack bend
geometric
IL_5J7L_266
IL_90729.1
IL_4V8A_1371/BA/844:846,
1/BA/931:934
Intercalated cWW
homologous
IL_7RQB_025
NA
IL_4V8A_3521/BA/844:850,
1/BA/927:934
No text annotation
homologous
IL_9DFE_024
IL_68243.1
IL_4V8A_1381/BA/846:850,
1/BA/927:931
No text annotation
geometric
IL_7RQB_026
NA
IL_4V8A_1391/BA/858:862,
1/BA/915:919
5x5 Sarcin-Ricin with intercalated A; G-bulge
homologous
IL_7RQB_027
NA
IL_4V8A_1401/BA/862:863,
1/BA/913:915
Minor groove platform
geometric
IL_7RQB_028
NA
IL_4V8A_1411/BA/864:868,
1/BA/909:912
C-loop with bulged stacked A's
homologous
IL_7RQB_029
NA
IL_4V8A_1421/BA/870:872,
1/BA/905:907
Isolated cWS basepair
homologous
IL_7RQB_030
NA
IL_4V8A_1431/BA/875:877,
1/BA/899:902
Minor groove platform with extra cWW
geometric
IL_7RQB_031
NA
IL_4V8A_1441/BA/877:879,
1/BA/898:899
Minor groove platform
homologous
IL_7RQB_032
NA
IL_4V8A_1451/BA/880:881,
1/BA/895:897
Single bulged A
homologous
IL_7RQB_033
NA
IL_4V8A_1461/BA/952:954,
1/BA/963:965
No text annotation
homologous
IL_7RQB_034
NA
IL_4V8A_1471/BA/994:996,
1/BA/1159:1160
Single bulged C
homologous
IL_7RQB_035
NA
IL_4V8A_1481/BA/998:1002,
1/BA/1153:1157
UAA/GAN
homologous
IL_7RQB_036
NA
IL_4V8A_1491/BA/1004:1011,
1/BA/1150:1151
SSU/LSU pseudoknot
geometric
IL_7RQB_037
NA
IL_4V8A_1501/BA/1011:1013,
1/BA/1149:1150
Single bulged U
homologous
IL_7RQB_038
NA
IL_4V8A_1511/BA/1018:1024,
1/BA/1140:1144
Kink-turn related
homologous
IL_4WF9_039
IL_57188.5
IL_4V8A_1521/BA/1024:1030,
1/BA/1124:1140
No text annotation
geometric
IL_7RQB_040
NA
IL_4V8A_1531/BA/1031:1034,
1/BA/1121:1123
Isolated non-canonical cWW pair
homologous
IL_7RQB_041
NA
IL_4V8A_1541/BA/1196:1198,
1/BA/1247:1250
Isolated cWS basepair
homologous
IL_7RQB_045
NA
IL_4V8A_1551/BA/1202:1206,
1/BA/1240:1243
No text annotation
homologous
IL_7RQB_046
NA
IL_4V8A_1561/BA/1208:1215,
1/BA/1234:1238
Kink-turn
homologous
IL_7RQB_047
NA
IL_4V8A_1571/BA/1219:1221,
1/BA/1229:1230
Single bulged A
homologous
IL_7RQB_048
NA
IL_4V8A_1581/BA/1262:1269,
1/BA/2011:2017
8x7 Sarcin-Ricin; G-bulge
homologous
IL_7RQB_049
NA
IL_4V8A_1591/BA/1310:1313,
1/BA/1603:1604
Major groove platform; stack outside cWW
homologous
IL_7RQB_050
NA
IL_4V8A_1601/BA/1319:1323,
1/BA/1331:1333
C-loop
homologous
IL_7RQB_051
NA
IL_4V8A_1611/BA/1351:1355,
1/BA/1376:1380
UAA/GAN
homologous
IL_7RQB_052
NA
IL_4V8A_1621/BA/1357:1361,
1/BA/1370:1374
tSH-tHW-tHS
homologous
IL_7RQB_053
NA
IL_4V8A_1631/BA/1415:1416,
1/BA/1582:1587
No text annotation
homologous
IL_7RQB_054
NA
IL_4V8A_1641/BA/1417:1421,
1/BA/1577:1581
UAA/GAN
homologous
IL_7RQB_055
NA
IL_4V8A_1651/BA/1433:1435,
1/BA/1557:1560
Isolated tWW turn
homologous
IL_7RQB_056
NA
IL_4V8A_1661/BA/1437:1440,
1/BA/1551:1555
tSH-tHW
homologous
IL_7RQB_057
NA
IL_4V8A_1671/BA/1448:1450,
1/BA/1462:1463
Single stack bend
homologous
IL_7RQB_058
NA
IL_4V8A_1681/BA/1450A:1451,
1/BA/1459:1461
Single bulged A
homologous
IL_7RQB_059
NA
IL_4V8A_1691/BA/1469:1473,
1/BA/1518:1523
UAA/GAN
homologous
IL_7RQB_060
NA
IL_4V8A_1701/BA/1481:1482,
1/BA/1506:1510
No text annotation
homologous
IL_7RQB_061
NA
IL_4V8A_1711/BA/1488:1491,
1/BA/1499:1501
Isolated non-canonical cWW with bulges
geometric
IL_5ML7_010
IL_07785.1
IL_4V8A_1721/BA/1526:1529,
1/BA/1540:1546
No text annotation
homologous
IL_7RQB_063
NA
IL_4V8A_1731/BA/1651:1656,
1/BA/2004:2006
No text annotation
homologous
IL_7RQB_064
NA
IL_4V8A_1741/BA/1663:1665,
1/BA/1995:1997
Isolated tWW turn
homologous
IL_4WF9_063
IL_67095.2
IL_4V8A_1751/BA/1666:1669,
1/BA/1993:1994
Major groove platform; stack outside cWW
homologous
IL_7RQB_066
NA
IL_4V8A_3531/BA/1666:1674,
1/BA/1990:1994
No text annotation
homologous
IL_9DFE_066
IL_22854.4
IL_4V8A_1761/BA/1669:1674,
1/BA/1990:1993
Intercalated tWH
geometric
IL_7RQB_067
NA
IL_4V8A_1771/BA/1686:1691,
1/BA/1696:1702
tSH-tSH-tHH-tHS
homologous
IL_7RQB_068
NA
IL_4V8A_1781/BA/1770:1771,
1/BA/1980:1982
Single bulged A
homologous
IL_7RQB_069
NA
IL_4V8A_1791/BA/1798:1804,
1/BA/1813:1821
Kink-turn related
homologous
IL_7RQB_070
NA
IL_4V8A_1801/BA/1837:1840,
1/BA/1902:1903
Minor groove platform, major groove intercalation
homologous
IL_7RQB_071
NA
IL_4V8A_1811/BA/1841:1842,
1/BA/1898:1901
Major groove intercalation
homologous
IL_7RQB_072
NA
IL_4V8A_1821/BA/1846:1849,
1/BA/1893:1894
Minor groove platform
homologous
IL_7RQB_073
NA
IL_4V8A_1831/BA/1851:1855,
1/BA/1887:1891
UAA/GAN with extra pair
homologous
IL_7RQB_074
NA
IL_4V8A_1841/BA/1856:1860,
1/BA/1882:1886
Triple sheared
homologous
IL_7RQB_075
NA
IL_4V8A_1851/BA/1933:1934,
1/BA/1964:1967
Bulged stacked bases
homologous
IL_7RQB_076
NA
IL_4V8A_1861/BA/1934:1945,
1/BA/1961:1964
No text annotation
geometric
IL_4WF9_077
IL_42218.2
IL_4V8A_1871/BA/2050:2052,
1/BA/2617:2618
Major groove platform
homologous
IL_7RQB_078
NA
IL_4V8A_1881/BA/2054:2057,
1/BA/2611:2615
No text annotation
homologous
IL_9DFE_079
IL_70335.1
IL_4V8A_1891/BA/2067:2069,
1/BA/2442:2443
Single bulged U
homologous
IL_7RQB_080
NA
IL_4V8A_1901/BA/2070:2071,
1/BA/2438:2441
Minor groove platform
homologous
IL_4WF9_081
IL_51454.3
IL_4V8A_1911/BA/2081:2083,
1/BA/2236:2239
Isolated tHS basepair with bulges
homologous
IL_7RQB_082
NA
IL_4V8A_1921/BA/2085:2087,
1/BA/2232:2234
No text annotation
homologous
IL_7RQB_083
NA
IL_4V8A_3601/BA/2124:2127,
1/BA/2161:2174
No text annotation
homologous
IL_3U4M_003
IL_75283.2
IL_4V8A_1981/BA/2297:2299,
1/BA/2317:2321
Isolated tHS basepair with bulges
homologous
IL_7RQB_088
NA
IL_4V8A_1991/BA/2350:2353,
1/BA/2364:2367
Double sheared
homologous
IL_7RQB_089
NA
IL_4V8A_2001/BA/2401:2403,
1/BA/2414:2415
Major groove platform
homologous
IL_7RQB_090
NA
IL_4V8A_2011/BA/2453:2454,
1/BA/2498:2500
Single stack bend
homologous
IL_7RQB_091
NA
IL_4V8A_2021/BA/2454:2455,
1/BA/2496:2498
Major groove platform
geometric
IL_7RQB_092
NA
IL_4V8A_2031/BA/2457:2459,
1/BA/2493:2494
Major groove platform
homologous
IL_4WF9_091
IL_48076.6
IL_4V8A_2041/BA/2459:2461,
1/BA/2489:2493
Major groove minor groove platform with extra cWW
geometric
IL_7RQB_094
NA
IL_4V8A_2051/BA/2466:2470,
1/BA/2480:2484
Triple sheared
homologous
IL_7RQB_095
NA
IL_4V8A_2061/BA/2507:2508,
1/BA/2580:2582
Major groove platform
homologous
IL_7A0S_088
IL_07039.3
IL_4V8A_2071/BA/2510:2512,
1/BA/2574:2578
Isolated non-canonical cWW with bulges
homologous
IL_7RQB_097
NA
IL_4V8A_2081/BA/2512:2513,
1/BA/2571:2574
Multiple bulged bases
geometric
IL_7RQB_098
NA
IL_4V8A_2091/BA/2522:2523,
1/BA/2540:2543
Major groove platform with intercalation
homologous
IL_7RQB_099
NA
IL_4V8A_2101/BA/2636:2640,
1/BA/2774:2782
tSH-tHS-tHW
homologous
IL_7RQB_102
NA
IL_4V8A_2111/BA/2652:2658,
1/BA/2663:2668
Sarcin-Ricin target in LSU H95; G-bulge
geometric
IL_7RQB_103
NA
IL_4V8A_2121/BA/2680:2684,
1/BA/2725:2727
C-loop
homologous
IL_7RQB_104
NA
IL_4V8A_2131/BA/2687:2691,
1/BA/2718:2722
No text annotation
homologous
IL_7RQB_105
NA
IL_4V8A_2141/BA/2695:2696,
1/BA/2711:2714
Multiple bulged bases
homologous
IL_7RQB_106
NA
IL_4V8A_2151/BA/2737:2742,
1/BA/2762:2767
UAA/GAN with extra cWW
homologous
IL_7RQB_107
NA
IL_4V8A_2161/BA/2838:2839,
1/BA/2878:2880
Single bulged C
homologous
IL_7RQB_108
NA
IL_4V8A_2171/BA/2843:2846,
1/BA/2870:2874
No text annotation
homologous
IL_7RQB_109
NA
IL_4V8A_2181/BA/2847:2852,
1/BA/2865:2869
tHS double platform
homologous
IL_7RQB_110
NA
IL_4V8A_2191/BB/17:18,
1/BB/65:67
Major groove intercalation
homologous
IL_7RQB_111
NA
IL_4V8A_2201/BB/23:28,
1/BB/56:60
No text annotation
homologous
IL_7RQB_112
NA
IL_4V8A_3611/BB/30:31,
1/BB/51:54
Major groove minor groove platform; mini C-loop
homologous
IL_4V9F_103
IL_68140.4
IL_4V8A_2221/BB/34:38,
1/BB/44:48
Symmetric double minor groove platform
homologous
IL_7RQB_114
NA
IL_4V8A_2231/BB/71:79,
1/BB/98:106
Bacterial 5S Loop E
homologous
IL_7RQB_115
NA
IL_4V8A_2241/CA/30:32,
1/CA/552:553
Single bulged G
homologous
IL_4LFB_001
IL_00225.13
IL_4V8A_2251/CA/44:45,
1/CA/396:398
Single bulged A
homologous
IL_4LFB_002
IL_31462.6
IL_4V8A_2261/CA/47:52,
1/CA/359:361
No text annotation
homologous
IL_4LFB_003
IL_14177.2
IL_4V8A_2271/CA/54:56,
1/CA/356:357
Minor groove platform
homologous
IL_6CZR_116
NA
IL_4V8A_2281/CA/63:66,
1/CA/103:104
Multiple bulged bases
homologous
IL_5J7L_005
IL_82107.4
IL_4V8A_2291/CA/67:69,
1/CA/100:102
Isolated non-canonical cWW pair
homologous
IL_4LFB_006
IL_87907.2
IL_4V8A_2301/CA/129:131,
1/CA/231:232
Minor groove platform
homologous
IL_4LFB_007
IL_33761.2
IL_4V8A_2311/CA/132:136,
1/CA/227:230
Minor groove platform related
homologous
IL_5J7L_010
IL_64231.5
IL_4V8A_2321/CA/148:153,
1/CA/168:174
tWH-tWH-tHW-tHW
homologous
IL_4LFB_009
IL_12745.1
IL_4V8A_3541/CA/148:155,
1/CA/166:174
No text annotation
IL_4V8A_2341/CA/186:188,
1/CA/189L:191
Isolated non-canonical cWW pair
homologous
IL_4LFB_010
IL_87907.2
IL_4V8A_2351/CA/242:247,
1/CA/277:284
Kink-turn with non-sequential stacking
homologous
IL_4LFB_011
IL_46174.3
IL_4V8A_2361/CA/249:252,
1/CA/274:275
No text annotation
homologous
IL_5J7L_015
IL_47074.2
IL_4V8A_2371/CA/292:293,
1/CA/304:308
C-loop
homologous
IL_4LFB_013
IL_03109.3
IL_4V8A_2381/CA/367:369,
1/CA/392:393
Single bulged U
homologous
IL_5J7L_017
IL_89505.4
IL_4V8A_3621/CA/371:375,
1/CA/389:390
C-loop
homologous
IL_4LFB_015
IL_03109.3
IL_4V8A_2401/CA/375:376,
1/CA/387:389
Single bulged G
geometric
IL_4LFB_016
IL_00225.13
IL_4V8A_2411/CA/409:416,
1/CA/427:433
No text annotation
homologous
IL_4LFB_017
IL_28026.3
IL_4V8A_2421/CA/446:450,
1/CA/483:488
6x5 Sarcin-Ricin; G-bulge
homologous
IL_4LFB_018
IL_88269.4
IL_4V8A_2431/CA/450:455,
1/CA/476:483
No text annotation
geometric
IL_4LFB_019
IL_31561.1
IL_4V8A_2441/CA/504:511,
1/CA/540:541
SSU/LSU pseudoknot
homologous
IL_5J7L_024
IL_41203.4
IL_4V8A_2451/CA/515:521,
1/CA/528:536
Kink-turn related
geometric
IL_4V88_415
NA
IL_4V8A_2461/CA/569:575,
1/CA/880:881
No text annotation
homologous
IL_4LFB_022
IL_38186.6
IL_4V8A_2471/CA/580:584,
1/CA/757:761
tSH-tHW-tHS
homologous
IL_6CZR_135
NA
IL_4V8A_2481/CA/594:596,
1/CA/644:645
Major groove platform
homologous
IL_4LFB_024
IL_48076.6
IL_4V8A_2491/CA/597:598,
1/CA/640:643
Major groove minor groove platform; mini C-loop
homologous
IL_5J7L_029
IL_68140.4
IL_4V8A_2501/CA/605:612,
1/CA/628:633
No text annotation
homologous
IL_4LFB_026
IL_78349.3
IL_4V8A_2511/CA/654:655,
1/CA/751:754
Major groove platform; stack outside cWW
homologous
IL_4LFB_027
IL_50694.7
IL_4V8A_2521/CA/657:658,
1/CA/747:749
Major groove platform
homologous
IL_6CZR_140
NA
IL_4V8A_2531/CA/662:666,
1/CA/740:743
Tandem non-canonical cWW pairs
homologous
IL_4LFB_029
IL_85033.2
IL_4V8A_2541/CA/683:688,
1/CA/699:707
Kink-turn
homologous
IL_4LFB_031
IL_95727.1
IL_4V8A_2551/CA/774:778,
1/CA/804:805
Left turn
homologous
IL_4LFB_032
IL_29346.2
IL_4V8A_2561/CA/779:783,
1/CA/799:803
tSH-tHW-tHS
homologous
IL_4LFB_033
IL_17136.7
IL_4V8A_2571/CA/887:894,
1/CA/905:910
8x6 Sarcin-Ricin with inserted Y; G-bulge
homologous
IL_4LFB_034
IL_41756.4
IL_4V8A_2581/CA/922:923,
1/CA/1393:1395
Single bulged A
homologous
IL_4LFB_035
IL_31462.6
IL_4V8A_2591/CA/925:927,
1/CA/1390:1391
Single bulged G
homologous
IL_4LFB_036
IL_00225.13
IL_4V8A_2601/CA/933:935,
1/CA/1380:1384
Minor groove platform
homologous
IL_4LFB_037
IL_47078.3
IL_4V8A_2611/CA/953:954,
1/CA/1226:1228
Minor groove platform
homologous
IL_5J7L_042
IL_51454.3
IL_4V8A_2661/CA/1048:1050,
1/CA/1208:1209
Single bulged U
homologous
IL_4LFB_042
IL_89505.4
IL_4V8A_2671/CA/1052:1056,
1/CA/1204:1206
Isolated cWS basepair
homologous
IL_4LFB_044
IL_76319.5
IL_4V8A_2681/CA/1057:1058,
1/CA/1199:1203
Minor groove platform
homologous
IL_5J7L_048
IL_95583.2
IL_4V8A_2691/CA/1060:1061,
1/CA/1195:1197
Single bulged U
geometric
IL_6CZR_156
NA
IL_4V8A_2701/CA/1061:1063,
1/CA/1193:1195
Isolated non-canonical cWW pair
homologous
IL_4LFB_047
IL_28037.2
IL_4V8A_2711/CA/1124:1128,
1/CA/1143:1149
No text annotation
geometric
IL_4LFB_048
IL_85222.1
IL_4V8A_2731/CA/1247:1253,
1/CA/1284:1290
No text annotation
homologous
IL_4LFB_051
IL_09129.2
IL_4V8A_2741/CA/1255:1258,
1/CA/1277:1282
180 degree turn
homologous
IL_6CZR_161
NA
IL_4V8A_2751/CA/1259:1262,
1/CA/1273:1276
Double sheared
geometric
IL_5J7L_256
IL_09705.15
IL_4V8A_2771/CA/1399:1401,
1/CA/1501:1504
No text annotation
geometric
IL_4V88_463
NA
IL_4V8A_2781/CA/1401:1404,
1/CA/1497:1501
No text annotation
geometric
IL_4V88_464
NA
IL_4V8A_2791/CA/1405:1407,
1/CA/1494:1496
Isolated non-canonical cWW pair
geometric
IL_5MWI_007
NA
IL_4V8A_2801/CA/1407:1409,
1/CA/1491:1494
Decoding loop related
geometric
IL_3C3Z_002
IL_31737.3
IL_4V8A_2811/CA/1412:1414,
1/CA/1486:1488
Isolated non-canonical cWW pair
homologous
IL_5J7L_061
IL_87907.2
IL_4V8A_2821/CA/1416:1419,
1/CA/1481:1484
Double sheared
homologous
IL_5J7L_062
IL_09705.15
IL_4V8A_2831/CA/1431:1435,
1/CA/1466:1469
UAA/GAN variation
geometric
IL_4LFB_062
IL_77691.5
IL_4V8A_2841/CA/1435:1437,
1/CA/1464:1466
Isolated non-canonical cWW pair
homologous
IL_4LFB_063
IL_87907.2
IL_4V8A_2851/CA/1440:1443,
1/CA/1459:1461
Isolated basepair with bulged bases
homologous
IL_6CZR_172
NA
IL_4V8A_2861/DA/30:32,
1/DA/552:553
Single bulged G
homologous
IL_4LFB_001
IL_00225.13
IL_4V8A_2871/DA/44:45,
1/DA/396:398
Single bulged A
homologous
IL_4LFB_002
IL_31462.6
IL_4V8A_2881/DA/47:52,
1/DA/359:361
No text annotation
homologous
IL_4LFB_003
IL_14177.2
IL_4V8A_2891/DA/54:56,
1/DA/356:357
Minor groove platform
homologous
IL_4LFB_004
IL_51454.3
IL_4V8A_2901/DA/63:66,
1/DA/103:104
Multiple bulged bases
homologous
IL_5J7L_005
IL_82107.4
IL_4V8A_2911/DA/67:69,
1/DA/100:102
Isolated non-canonical cWW pair
homologous
IL_4LFB_006
IL_87907.2
IL_4V8A_2921/DA/129:131,
1/DA/231:232
Minor groove platform
homologous
IL_4LFB_007
IL_33761.2
IL_4V8A_2931/DA/132:136,
1/DA/227:230
No text annotation
homologous
IL_4LFB_008
IL_64231.5
IL_4V8A_2951/DA/148:153,
1/DA/168:174
tWH-tWH-tHW-tHW
homologous
IL_4LFB_009
IL_12745.1
IL_4V8A_2971/DA/186:188,
1/DA/189L:191
Isolated non-canonical cWW pair
geometric
IL_4LFB_010
IL_87907.2
IL_4V8A_2981/DA/242:247,
1/DA/277:284
Kink-turn with non-sequential stacking
homologous
IL_4LFB_011
IL_46174.3
IL_4V8A_2991/DA/249:252,
1/DA/274:275
No text annotation
homologous
IL_5J7L_015
IL_47074.2
IL_4V8A_3001/DA/292:293,
1/DA/304:308
C-loop
homologous
IL_4LFB_013
IL_03109.3
IL_4V8A_3011/DA/367:369,
1/DA/392:393
Single bulged U
homologous
IL_5J7L_017
IL_89505.4
IL_4V8A_3631/DA/371:375,
1/DA/389:390
C-loop
homologous
IL_5J7L_018
IL_03109.3
IL_4V8A_3031/DA/375:376,
1/DA/387:389
Single bulged G
homologous
IL_4LFB_016
IL_00225.13
IL_4V8A_3041/DA/409:416,
1/DA/427:433
No text annotation
homologous
IL_4LFB_017
IL_28026.3
IL_4V8A_3051/DA/446:450,
1/DA/483:488
6x5 Sarcin-Ricin; G-bulge
geometric
IL_4LFB_018
IL_88269.4
IL_4V8A_3061/DA/450:455,
1/DA/476:483
No text annotation
homologous
IL_4LFB_019
IL_31561.1
IL_4V8A_3071/DA/504:511,
1/DA/540:541
SSU/LSU pseudoknot
homologous
IL_5J7L_024
IL_41203.4
IL_4V8A_3081/DA/515:521,
1/DA/528:536
Kink-turn related
geometric
IL_4V88_415
NA
IL_4V8A_3091/DA/569:575,
1/DA/880:881
No text annotation
homologous
IL_4LFB_022
IL_38186.6
IL_4V8A_3101/DA/580:584,
1/DA/757:761
tSH-tHW-tHS
homologous
IL_4LFB_023
IL_17136.7
IL_4V8A_3111/DA/594:596,
1/DA/644:645
Major groove platform
homologous
IL_4LFB_024
IL_48076.6
IL_4V8A_3121/DA/597:598,
1/DA/640:643
Major groove minor groove platform; mini C-loop
homologous
IL_5J7L_029
IL_68140.4
IL_4V8A_3131/DA/605:612,
1/DA/628:633
No text annotation
homologous
IL_4LFB_026
IL_78349.3
IL_4V8A_3141/DA/654:655,
1/DA/751:754
Major groove platform; stack outside cWW
homologous
IL_4LFB_027
IL_50694.7
IL_4V8A_3151/DA/657:658,
1/DA/747:749
Major groove platform
homologous
IL_4LFB_028
IL_48076.6
IL_4V8A_3161/DA/662:666,
1/DA/740:743
Tandem non-canonical cWW pairs
homologous
IL_4LFB_029
IL_85033.2
IL_4V8A_3171/DA/673:678,
1/DA/712:717
No text annotation
homologous
IL_5J7L_034
NA
IL_4V8A_3181/DA/683:688,
1/DA/699:707
Kink-turn
homologous
IL_4LFB_031
IL_95727.1
IL_4V8A_3641/DA/774:778,
1/DA/804:805
Left turn
homologous
IL_4LFB_032
IL_29346.2
IL_4V8A_3201/DA/779:783,
1/DA/799:803
tSH-tHW-tHS
homologous
IL_4LFB_033
IL_17136.7
IL_4V8A_3211/DA/887:894,
1/DA/905:910
8x6 Sarcin-Ricin with inserted Y; G-bulge
homologous
IL_4LFB_034
IL_41756.4
IL_4V8A_3221/DA/922:923,
1/DA/1393:1395
Single bulged A
homologous
IL_4LFB_035
IL_31462.6
IL_4V8A_3231/DA/925:927,
1/DA/1390:1391
Single bulged G
homologous
IL_4LFB_036
IL_00225.13
IL_4V8A_3241/DA/933:935,
1/DA/1380:1384
Minor groove platform
homologous
IL_5J7L_041
IL_47078.3
IL_4V8A_3251/DA/953:954,
1/DA/1226:1228
Minor groove platform
homologous
IL_5J7L_042
IL_51454.3
IL_4V8A_3281/DA/1048:1050,
1/DA/1208:1209
Single bulged U
homologous
IL_4LFB_042
IL_89505.4
IL_4V8A_3291/DA/1052:1056,
1/DA/1204:1206
Isolated cWS basepair
homologous
IL_4LFB_044
IL_76319.5
IL_4V8A_3301/DA/1057:1058,
1/DA/1199:1203
Minor groove platform
homologous
IL_4LFB_045
IL_95583.2
IL_4V8A_3311/DA/1060:1061,
1/DA/1195:1197
Single bulged U
geometric
IL_4LFB_046
IL_89505.4
IL_4V8A_3321/DA/1061:1063,
1/DA/1193:1195
Isolated non-canonical cWW pair
homologous
IL_4LFB_047
IL_28037.2
IL_4V8A_3331/DA/1124:1128,
1/DA/1143:1149
No text annotation
geometric
IL_4LFB_048
IL_85222.1
IL_4V8A_3351/DA/1247:1253,
1/DA/1284:1290
No text annotation
homologous
IL_4LFB_051
IL_09129.2
IL_4V8A_3361/DA/1255:1258,
1/DA/1277:1282
180 degree turn
homologous
IL_4LFB_052
IL_11344.2
IL_4V8A_3381/DA/1303:1308,
1/DA/1329:1334
No text annotation
homologous
IL_4LFB_055
IL_85536.2
IL_4V8A_3391/DA/1399:1401,
1/DA/1501:1504
No text annotation
homologous
IL_4LFB_056
IL_61438.4
IL_4V8A_3401/DA/1401:1404,
1/DA/1497:1501
No text annotation
geometric
IL_4V88_464
NA
IL_4V8A_3411/DA/1405:1407,
1/DA/1494:1496
Isolated non-canonical cWW pair
geometric
IL_5MWI_007
NA
IL_4V8A_3421/DA/1407:1409,
1/DA/1491:1494
Decoding loop related
geometric
IL_3C3Z_002
IL_31737.3
IL_4V8A_3431/DA/1412:1414,
1/DA/1486:1488
Isolated non-canonical cWW pair
homologous
IL_5J7L_061
IL_87907.2
IL_4V8A_3441/DA/1416:1419,
1/DA/1481:1484
Double sheared
homologous
IL_5J7L_062
IL_09705.15
IL_4V8A_3451/DA/1431:1435,
1/DA/1466:1469
UAA/GAN variation
geometric
IL_4LFB_062
IL_77691.5
IL_4V8A_3461/DA/1435:1437,
1/DA/1464:1466
Isolated non-canonical cWW pair
homologous
IL_4LFB_063
IL_87907.2
IL_4V8A_3471/DA/1440:1443,
1/DA/1459:1461
Isolated basepair with bulged bases
homologous
IL_6CZR_172
NA

Problematic loops

#loop idProblemSequence
IL_4V8A_010No text annotation
IL_4V8A_081No text annotation
IL_4V8A_083No text annotation
IL_4V8A_358No text annotation
IL_4V8A_097Isolated non-canonical cWW pair
IL_4V8A_109No text annotation
IL_4V8A_1108-nt loop receptor
IL_4V8A_350No text annotation
IL_4V8A_122No text annotation
IL_4V8A_351No text annotation
IL_4V8A_193Isolated non-canonical cWW pair
IL_4V8A_194No text annotation
IL_4V8A_195No text annotation
IL_4V8A_196No text annotation
IL_4V8A_197Isolated non-canonical cWW pair
IL_4V8A_221No text annotation
IL_4V8A_233Isolated non-canonical cWW pair
IL_4V8A_239No text annotation
IL_4V8A_355Single bulged G, near cWW
IL_4V8A_356Major groove platform with extra cWW
IL_4V8A_262Minor groove platform
IL_4V8A_263Isolated non-canonical cWW pair
IL_4V8A_264No text annotation
IL_4V8A_265No text annotation
IL_4V8A_272Minor groove platform
IL_4V8A_276No text annotation
IL_4V8A_294Isolated non-canonical cWW pair
IL_4V8A_296Isolated non-canonical cWW pair
IL_4V8A_302No text annotation
IL_4V8A_357No text annotation
IL_4V8A_319No text annotation
IL_4V8A_326Minor groove platform
IL_4V8A_327No text annotation
IL_4V8A_334Minor groove platform
IL_4V8A_337Double sheared

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
J3_4V8A_0321/AA/30:31,
1/AA/474:481,
1/AA/509:510
No text annotation
geometric
J3_8VTW_036
NA
J3_4V8A_0331/AA/30:31,
1/AA/474:484,
1/AA/496:510
No text annotation
homologous
J3_9DFE_002
J3_92134.2
J3_4V8A_0341/AA/32:35,
1/AA/445:461,
1/AA/468:473
No text annotation
homologous
J3_9DFE_003
J3_30040.2
J3_4V8A_0351/AA/56:57,
1/AA/70:76,
1/AA/110:114
No text annotation
homologous
J3_9DFE_004
J3_35667.2
J3_4V8A_0361/AA/269:271,
1/AA/271:272,
1/AA/366:370
No text annotation
homologous
J3_9DFE_005
J3_97971.2
J3_4V8A_0371/AA/297:301,
1/AA/316:325,
1/AA/337:341
No text annotation
homologous
J3_9DFE_006
J3_46299.2
J3_4V8A_0011/AA/683:689,
1/AA/773:775,
1/AA/791:794
No text annotation
homologous
J3_7RQB_004
NA
J3_4V8A_0021/AA/698:700,
1/AA/732:736,
1/AA/760:763
No text annotation
homologous
J3_7RQB_005
NA
J3_4V8A_0031/AA/1298:1303,
1/AA/1625:1627,
1/AA/1639:1642
No text annotation
homologous
J3_7RQB_007
NA
J3_4V8A_0041/AA/1306:1309,
1/AA/1605:1611,
1/AA/1620:1622
No text annotation
homologous
J3_7RQB_008
NA
J3_4V8A_0381/AA/1344:1350,
1/AA/1381:1385,
1/AA/1402:1403
No text annotation
homologous
J3_9DFE_012
J3_31965.2
J3_4V8A_0391/AA/1424:1429,
1/AA/1564:1565,
1/AA/1568:1574
No text annotation
homologous
J3_9DFE_013
J3_34864.2
J3_4V8A_0051/AA/2091:2093,
1/AA/2196:2200,
1/AA/2223:2228
No text annotation
homologous
J3_7RQB_010
NA
J3_4V8A_0061/AA/2282:2284,
1/AA/2384:2395,
1/AA/2421:2427
No text annotation
homologous
J3_9DFE_015
J3_20992.1
J3_4V8A_0071/AA/2295:2297,
1/AA/2321:2323,
1/AA/2332:2337
No text annotation
homologous
J3_7RQB_011
NA
J3_4V8A_0081/AA/2517:2520,
1/AA/2545:2547,
1/AA/2561:2567
No text annotation
homologous
J3_7RQB_012
NA
J3_4V8A_0401/AA/2814:2815,
1/AA/2831:2836,
1/AA/2882:2886
No text annotation
homologous
J3_9DFE_019
J3_76911.2
J3_4V8A_0411/AB/11:16,
1/AB/68:69,
1/AB/108:110
No text annotation
homologous
J3_9DFE_020
J3_12003.2
J3_4V8A_0421/BA/30:31,
1/BA/474:481,
1/BA/509:510
No text annotation
geometric
J3_8VTW_036
NA
J3_4V8A_0431/BA/30:31,
1/BA/474:484,
1/BA/496:510
No text annotation
homologous
J3_9DFE_002
J3_92134.2
J3_4V8A_0441/BA/32:35,
1/BA/445:461,
1/BA/468:473
No text annotation
homologous
J3_9DFE_003
J3_30040.2
J3_4V8A_0451/BA/56:57,
1/BA/70:76,
1/BA/110:114
No text annotation
homologous
J3_9DFE_004
J3_35667.2
J3_4V8A_0461/BA/269:271,
1/BA/271:272,
1/BA/366:370
No text annotation
homologous
J3_9DFE_005
J3_97971.2
J3_4V8A_0471/BA/297:301,
1/BA/316:325,
1/BA/337:341
No text annotation
homologous
J3_9DFE_006
J3_46299.2
J3_4V8A_0091/BA/683:689,
1/BA/773:775,
1/BA/791:794
No text annotation
homologous
J3_7RQB_004
NA
J3_4V8A_0101/BA/698:700,
1/BA/732:736,
1/BA/760:763
No text annotation
homologous
J3_7RQB_005
NA
J3_4V8A_0111/BA/1298:1303,
1/BA/1625:1627,
1/BA/1639:1642
No text annotation
homologous
J3_7RQB_007
NA
J3_4V8A_0121/BA/1306:1309,
1/BA/1605:1611,
1/BA/1620:1622
No text annotation
homologous
J3_7RQB_008
NA
J3_4V8A_0481/BA/1344:1350,
1/BA/1381:1385,
1/BA/1402:1403
No text annotation
homologous
J3_9DFE_012
J3_31965.2
J3_4V8A_0491/BA/1424:1429,
1/BA/1564:1565,
1/BA/1568:1574
No text annotation
homologous
J3_9DFE_013
J3_34864.2
J3_4V8A_0131/BA/2091:2093,
1/BA/2196:2200,
1/BA/2223:2228
No text annotation
homologous
J3_7RQB_010
NA
J3_4V8A_0501/BA/2282:2284,
1/BA/2384:2395,
1/BA/2421:2427
No text annotation
homologous
J3_9DFE_015
J3_20992.1
J3_4V8A_0141/BA/2295:2297,
1/BA/2321:2323,
1/BA/2332:2337
No text annotation
homologous
J3_7RQB_011
NA
J3_4V8A_0151/BA/2517:2520,
1/BA/2545:2547,
1/BA/2561:2567
No text annotation
homologous
J3_7RQB_012
NA
J3_4V8A_0511/BA/2814:2815,
1/BA/2831:2836,
1/BA/2882:2886
No text annotation
homologous
J3_9DFE_019
J3_76911.2
J3_4V8A_0521/BB/11:16,
1/BB/68:69,
1/BB/108:110
No text annotation
homologous
J3_9DFE_020
J3_12003.2
J3_4V8A_0531/CA/46:47,
1/CA/361:367,
1/CA/393:395
No text annotation
geometric
J3_8C3A_082
NA
J3_4V8A_0541/CA/46:52,
1/CA/359:367,
1/CA/393:395
No text annotation
homologous
J3_4LFB_014
J3_46317.4
J3_4V8A_0551/CA/586:588,
1/CA/651:654,
1/CA/754:755
No text annotation
geometric
J3_6CZR_016
NA
J3_4V8A_0561/CA/586:588,
1/CA/651:655,
1/CA/751:755
No text annotation
homologous
J3_4LFB_015
J3_17385.4
J3_4V8A_0571/CA/672:677,
1/CA/713:725,
1/CA/732:734
No text annotation
J3_4V8A_0161/CA/826:829,
1/CA/857:861,
1/CA/868:874
No text annotation
homologous
J3_4LFB_001
J3_85054.4
J3_4V8A_0171/CA/936:939,
1/CA/1344:1350,
1/CA/1372:1379
No text annotation
homologous
J3_4LFB_002
J3_25303.4
J3_4V8A_0181/CA/943:946,
1/CA/1235:1237,
1/CA/1337:1340
No text annotation
homologous
J3_5J7L_005
J3_52655.4
J3_4V8A_0191/CA/955:962,
1/CA/973:984,
1/CA/1221:1225
No text annotation
homologous
J3_4LFB_004
J3_83516.4
J3_4V8A_0211/CA/1063:1068,
1/CA/1107:1113,
1/CA/1187:1193
No text annotation
homologous
J3_4LFB_007
J3_08394.3
J3_4V8A_0671/CA/1073:1074,
1/CA/1083:1086,
1/CA/1099:1102
No text annotation
homologous
J3_4LFB_017
J3_79369.1
J3_4V8A_0231/CA/1116:1118,
1/CA/1155:1161,
1/CA/1175:1184
No text annotation
homologous
J3_4LFB_018
J3_17791.2
J3_4V8A_0241/CA/1237:1241,
1/CA/1296:1303,
1/CA/1334:1337
No text annotation
homologous
J3_4LFB_009
J3_37047.6
J3_4V8A_0591/DA/46:47,
1/DA/361:367,
1/DA/393:395
No text annotation
geometric
J3_8C3A_082
NA
J3_4V8A_0601/DA/46:52,
1/DA/359:367,
1/DA/393:395
No text annotation
homologous
J3_4LFB_014
J3_46317.4
J3_4V8A_0611/DA/586:588,
1/DA/651:654,
1/DA/754:755
No text annotation
geometric
J3_4LFB_011
J3_56052.5
J3_4V8A_0621/DA/586:588,
1/DA/651:655,
1/DA/751:755
No text annotation
homologous
J3_4LFB_015
J3_17385.4
J3_4V8A_0631/DA/672:677,
1/DA/713:725,
1/DA/732:734
No text annotation
J3_4V8A_0251/DA/826:829,
1/DA/857:861,
1/DA/868:874
No text annotation
homologous
J3_4LFB_001
J3_85054.4
J3_4V8A_0641/DA/936:939,
1/DA/1344:1350,
1/DA/1372:1379
No text annotation
homologous
J3_4LFB_002
J3_25303.4
J3_4V8A_0261/DA/943:946,
1/DA/1235:1237,
1/DA/1337:1340
No text annotation
homologous
J3_5J7L_005
J3_52655.4
J3_4V8A_0271/DA/955:962,
1/DA/973:984,
1/DA/1221:1225
No text annotation
homologous
J3_4LFB_004
J3_83516.4
J3_4V8A_0281/DA/990:993,
1/DA/1045:1047,
1/DA/1210:1215
No text annotation
homologous
J3_5J7L_007
J3_82572.1
J3_4V8A_0651/DA/990:997,
1/DA/1044:1047,
1/DA/1210:1215
No text annotation
homologous
J3_4LFB_016
J3_76475.2
J3_4V8A_0291/DA/1063:1068,
1/DA/1107:1113,
1/DA/1187:1193
No text annotation
homologous
J3_4LFB_007
J3_08394.3
J3_4V8A_0681/DA/1073:1074,
1/DA/1083:1086,
1/DA/1099:1102
No text annotation
homologous
J3_4LFB_017
J3_79369.1
J3_4V8A_0301/DA/1116:1118,
1/DA/1155:1161,
1/DA/1175:1184
No text annotation
homologous
J3_4LFB_018
J3_17791.2
J3_4V8A_0311/DA/1237:1241,
1/DA/1296:1303,
1/DA/1334:1337
No text annotation
homologous
J3_4LFB_009
J3_37047.6
J4_4V8A_0011/AA/268:269,
1/AA/370:375,
1/AA/399:406,
1/AA/421:424
No text annotation
homologous
J4_9DFE_001
J4_45801.6
J4_4V8A_0021/AA/297:301,
1/AA/316:319,
1/AA/323:325,
1/AA/337:341
No text annotation
homologous
J4_9DFE_002
J4_71729.5
J4_4V8A_0031/AA/1270:1276,
1/AA/1294:1295,
1/AA/1645:1648,
1/AA/2009:2010
No text annotation
homologous
J4_9DFE_003
J4_64571.5
J4_4V8A_0041/AA/1310:1314,
1/AA/1338:1343,
1/AA/1404:1405,
1/AA/1597:1604
No text annotation
homologous
J4_9DFE_004
J4_69051.6
J4_4V8A_0051/AA/1313:1314,
1/AA/1338:1343,
1/AA/1404:1405,
1/AA/1597:1603
No text annotation
homologous
J4_9DFE_005
J4_10313.5
J4_4V8A_0061/AA/1444:1445,
1/AA/1466:1467,
1/AA/1525:1526,
1/AA/1546:1547
No text annotation
homologous
J4_9DFE_006
J4_24280.2
J4_4V8A_0071/AA/1772:1776,
1/AA/1788:1792,
1/AA/1827:1830,
1/AA/1975:1979
No text annotation
homologous
J4_9DFE_007
J4_61477.5
J4_4V8A_0081/AA/1833:1835,
1/AA/1905:1906,
1/AA/1924:1933,
1/AA/1967:1972
No text annotation
homologous
J4_9DFE_008
J4_93343.1
J4_4V8A_0091/AA/2285:2289,
1/AA/2343:2347,
1/AA/2370:2372,
1/AA/2381:2383
No text annotation
homologous
J4_9DFE_009
J4_04930.6
J4_4V8A_0101/AA/2643:2646,
1/AA/2674:2676,
1/AA/2731:2735,
1/AA/2769:2771
No text annotation
homologous
J4_9DFE_010
J4_77044.4
J4_4V8A_0111/BA/268:269,
1/BA/370:375,
1/BA/399:406,
1/BA/421:424
No text annotation
homologous
J4_9DFE_001
J4_45801.6
J4_4V8A_0121/BA/297:301,
1/BA/316:319,
1/BA/323:325,
1/BA/337:341
No text annotation
homologous
J4_9DFE_002
J4_71729.5
J4_4V8A_0131/BA/1270:1276,
1/BA/1294:1295,
1/BA/1645:1648,
1/BA/2009:2010
No text annotation
homologous
J4_9DFE_003
J4_64571.5
J4_4V8A_0141/BA/1310:1314,
1/BA/1338:1343,
1/BA/1404:1405,
1/BA/1597:1604
No text annotation
homologous
J4_9DFE_004
J4_69051.6
J4_4V8A_0151/BA/1313:1314,
1/BA/1338:1343,
1/BA/1404:1405,
1/BA/1597:1603
No text annotation
homologous
J4_9DFE_005
J4_10313.5
J4_4V8A_0161/BA/1444:1445,
1/BA/1466:1467,
1/BA/1525:1526,
1/BA/1546:1547
No text annotation
homologous
J4_9DFE_006
J4_24280.2
J4_4V8A_0171/BA/1772:1776,
1/BA/1788:1792,
1/BA/1827:1830,
1/BA/1975:1979
No text annotation
homologous
J4_9DFE_007
J4_61477.5
J4_4V8A_0181/BA/1833:1835,
1/BA/1905:1906,
1/BA/1924:1933,
1/BA/1967:1972
No text annotation
homologous
J4_9DFE_008
J4_93343.1
J4_4V8A_0191/BA/2285:2289,
1/BA/2343:2347,
1/BA/2370:2372,
1/BA/2381:2383
No text annotation
homologous
J4_9DFE_009
J4_04930.6
J4_4V8A_0201/BA/2643:2646,
1/BA/2674:2676,
1/BA/2731:2735,
1/BA/2769:2771
No text annotation
homologous
J4_9DFE_010
J4_77044.4
J4_4V8A_0211/CA/115:122,
1/CA/239:240,
1/CA/286:289,
1/CA/311:312
No text annotation
homologous
J4_4LFB_001
J4_35578.3
J4_4V8A_0221/CA/142:144,
1/CA/178:183,
1/CA/194:198,
1/CA/219:221
No text annotation
homologous
J4_4LFB_002
J4_88771.1
J4_4V8A_0231/CA/575:577,
1/CA/764:769,
1/CA/810:821,
1/CA/879:880
No text annotation
homologous
J4_4LFB_003
J4_61885.6
J4_4V8A_0241/DA/115:122,
1/DA/239:240,
1/DA/286:289,
1/DA/311:312
No text annotation
homologous
J4_4LFB_001
J4_35578.3
J4_4V8A_0271/DA/142:144,
1/DA/178:183,
1/DA/194:198,
1/DA/219:221
No text annotation
homologous
J4_4LFB_002
J4_88771.1
J4_4V8A_0261/DA/575:577,
1/DA/764:769,
1/DA/810:821,
1/DA/879:880
No text annotation
homologous
J4_4LFB_003
J4_61885.6
J5_4V8A_0011/AA/47:54,
1/AA/116:121,
1/AA/130:131,
1/AA/148:150,
1/AA/176:178
No text annotation
homologous
J5_9DFE_001
J5_01737.2
J5_4V8A_0021/AA/268:271,
1/AA/271:272,
1/AA/366:375,
1/AA/399:406,
1/AA/421:424
No text annotation
J5_4V8A_0031/AA/531:533,
1/AA/560:564,
1/AA/577:579,
1/AA/1261:1262,
1/AA/2017:2018
No text annotation
homologous
J5_9DFE_003
J5_43153.5
J5_4V8A_0041/AA/584:589,
1/AA/668:671,
1/AA/809:812,
1/AA/1195:1196,
1/AA/1250:1256
No text annotation
homologous
J5_9DFE_004
J5_74302.5
J5_4V8A_0051/AA/601:604,
1/AA/624:628,
1/AA/635:638,
1/AA/650:652,
1/AA/652:656
No text annotation
J5_4V8A_0061/AA/1674:1682,
1/AA/1706:1707,
1/AA/1751:1752,
1/AA/1756:1764,
1/AA/1988:1990
No text annotation
homologous
J5_9DFE_005
J5_62523.6
J5_4V8A_0071/AA/2057:2064,
1/AA/2446:2453,
1/AA/2500:2507,
1/AA/2582:2588,
1/AA/2606:2611
No text annotation
J5_4V8A_0081/AA/2074:2077,
1/AA/2243:2246,
1/AA/2258:2259,
1/AA/2281:2282,
1/AA/2427:2435
No text annotation
homologous
J5_9DFE_007
J5_39529.1
J5_4V8A_0091/BA/47:54,
1/BA/116:121,
1/BA/130:131,
1/BA/148:150,
1/BA/176:178
No text annotation
homologous
J5_9DFE_001
J5_01737.2
J5_4V8A_0101/BA/268:271,
1/BA/271:272,
1/BA/366:375,
1/BA/399:406,
1/BA/421:424
No text annotation
J5_4V8A_0111/BA/531:533,
1/BA/560:564,
1/BA/577:579,
1/BA/1261:1262,
1/BA/2017:2018
No text annotation
homologous
J5_9DFE_003
J5_43153.5
J5_4V8A_0121/BA/584:589,
1/BA/668:671,
1/BA/809:812,
1/BA/1195:1196,
1/BA/1250:1256
No text annotation
homologous
J5_9DFE_004
J5_74302.5
J5_4V8A_0131/BA/601:604,
1/BA/624:628,
1/BA/635:638,
1/BA/650:652,
1/BA/652:656
No text annotation
J5_4V8A_0141/BA/1674:1682,
1/BA/1706:1707,
1/BA/1751:1752,
1/BA/1756:1764,
1/BA/1988:1990
No text annotation
homologous
J5_9DFE_005
J5_62523.6
J5_4V8A_0151/BA/2057:2064,
1/BA/2446:2453,
1/BA/2500:2507,
1/BA/2582:2588,
1/BA/2606:2611
No text annotation
J5_4V8A_0161/BA/2074:2077,
1/BA/2243:2246,
1/BA/2258:2259,
1/BA/2281:2282,
1/BA/2427:2435
No text annotation
homologous
J5_9DFE_007
J5_39529.1
J5_4V8A_0211/CA/36:39,
1/CA/403:406,
1/CA/436:442,
1/CA/492:500,
1/CA/545:548
No text annotation
homologous
J5_4LFB_001
J5_70703.1
J5_4V8A_0181/CA/58:61,
1/CA/106:113,
1/CA/314:316,
1/CA/337:339,
1/CA/350:354
No text annotation
homologous
J5_4LFB_002
J5_59910.6
J5_4V8A_0221/DA/36:39,
1/DA/403:406,
1/DA/436:442,
1/DA/492:500,
1/DA/545:548
No text annotation
homologous
J5_4LFB_001
J5_70703.1
J5_4V8A_0201/DA/58:61,
1/DA/106:113,
1/DA/314:316,
1/DA/337:339,
1/DA/350:354
No text annotation
homologous
J5_4LFB_002
J5_59910.6
J6_4V8A_0011/AA/44:45,
1/AA/179:183,
1/AA/214:224,
1/AA/231:235,
1/AA/262:266,
1/AA/426:433
No text annotation
J6_4V8A_0021/AA/2074:2077,
1/AA/2243:2246,
1/AA/2258:2259,
1/AA/2281:2284,
1/AA/2384:2395,
1/AA/2421:2435
No text annotation
J6_4V8A_0031/BA/44:45,
1/BA/179:183,
1/BA/214:224,
1/BA/231:235,
1/BA/262:266,
1/BA/426:433
No text annotation
J6_4V8A_0041/BA/2074:2077,
1/BA/2243:2246,
1/BA/2258:2259,
1/BA/2281:2284,
1/BA/2384:2395,
1/BA/2421:2435
No text annotation
J7_4V8A_0011/AA/817:822,
1/AA/835:836,
1/AA/943:946,
1/AA/971:976,
1/AA/987:991,
1/AA/1163:1164,
1/AA/1185:1190
No text annotation
J7_4V8A_0021/BA/817:822,
1/BA/835:836,
1/BA/943:946,
1/BA/971:976,
1/BA/987:991,
1/BA/1163:1164,
1/BA/1185:1190
No text annotation

Problematic loops

#loop idProblemSequence
J3_4V8A_020No text annotation
J3_4V8A_058No text annotation
J3_4V8A_022No text annotation
J3_4V8A_066No text annotation
J4_4V8A_025No text annotation
J5_4V8A_017No text annotation
J5_4V8A_019No text annotation

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