RNA 3D Hub //

9SS4 Hairpin, Internal, and multi-helix Junction Loop Motifs

Download loops

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
HL_9SS4_0011/D2/59:68No text annotation
geometric
HL_8B0X_033
HL_35677.5
HL_9SS4_0021/D2/87:95No text annotation
geometric
HL_8B0X_034
HL_65821.1
HL_9SS4_0031/D2/123:128No text annotation
homologous
HL_7A0S_003
HL_82710.3
HL_9SS4_0041/D2/137:142No text annotation
HL_9SS4_0051/D2/158:168No text annotation
HL_9SS4_0061/D2/194:201No text annotation
homologous
HL_7A0S_006
HL_48677.2
HL_9SS4_0071/D2/225:230No text annotation
geometric
HL_8B0X_039
HL_63151.1
HL_9SS4_0081/D2/246:252No text annotation
homologous
HL_7A0S_008
HL_76371.3
HL_9SS4_0091/D2/305:312T-loop with 1 bulged base
homologous
HL_7A0S_010
HL_13999.4
HL_9SS4_0101/D2/327:335T-loop with unstacked turn
homologous
HL_7A0S_012
HL_27670.5
HL_9SS4_0111/D2/382:392No text annotation
homologous
HL_7A0S_013
HL_91503.8
HL_9SS4_0121/D2/410:417Pseudoknot geometry
homologous
HL_7A0S_014
HL_30680.5
HL_9SS4_0131/D2/462:467GNRA
homologous
HL_7A0S_015
HL_34789.5
HL_9SS4_0141/D2/487:493GNRA
homologous
HL_7A0S_016
HL_34789.5
HL_9SS4_0161/D2/566:575T-loop with 2 stacked bulged bases
homologous
HL_7A0S_018
HL_33597.4
HL_9SS4_0171/D2/611:617No text annotation
geometric
HL_9E6Q_019
HL_42293.1
HL_9SS4_0181/D2/629:634GNRA
homologous
HL_7A0S_020
HL_34789.5
HL_9SS4_0191/D2/641:647No text annotation
geometric
HL_8B0X_051
HL_07380.1
HL_9SS4_0211/D2/744:753No text annotation
homologous
HL_7A0S_022
HL_50204.2
HL_9SS4_0221/D2/779:785UNCG variation
homologous
HL_7A0S_023
HL_91813.1
HL_9SS4_0231/D2/826:831No text annotation
homologous
HL_7A0S_024
HL_27530.2
HL_9SS4_0251/D2/955:962GNRA
homologous
HL_7A0S_026
HL_34789.5
HL_9SS4_0261/D2/978:985No text annotation
homologous
HL_7A0S_027
HL_47171.2
HL_9SS4_0281/D2/1092:1099GNRA with tandem sheared
homologous
HL_6PRV_002
HL_98423.4
HL_9SS4_0301/D2/1222:1227GNRA
homologous
HL_7A0S_031
HL_34789.5
HL_9SS4_0311/D2/1281:1289T-loop with 2 stacked bulged bases
homologous
HL_7A0S_032
HL_33597.4
HL_9SS4_0321/D2/1324:1330Pseudoknot geometry with 3' bulge
homologous
HL_7A0S_033
HL_49081.1
HL_9SS4_0331/D2/1363:1368GNRA variation
homologous
HL_7A0S_034
HL_34789.5
HL_9SS4_0341/D2/1389:1398No text annotation
homologous
HL_7A0S_035
HL_77449.2
HL_9SS4_0351/D2/1451:1459No text annotation
HL_9SS4_0361/D2/1492:1498No text annotation
homologous
HL_7A0S_037
HL_39243.1
HL_9SS4_0381/D2/1565:1568Mini UNCG
homologous
HL_7A0S_039
HL_90436.4
HL_9SS4_0391/D2/1612:1619No text annotation
homologous
HL_7A0S_040
HL_28592.3
HL_9SS4_0401/D2/1630:1636No text annotation
geometric
HL_8B0X_069
HL_34789.5
HL_9SS4_0411/D2/1691:1696UNCG
homologous
HL_7A0S_042
HL_61337.5
HL_9SS4_0421/D2/1728:1731No text annotation
HL_9SS4_0431/D2/1752:1756No text annotation
homologous
HL_7A0S_044
HL_80709.5
HL_9SS4_0441/D2/1777:1787No text annotation
geometric
HL_4WF9_043
HL_87681.2
HL_9SS4_0451/D2/1806:1811GNRA
homologous
HL_7A0S_046
HL_93535.3
HL_9SS4_0461/D2/1949:1957No text annotation
homologous
HL_7A0S_048
HL_33350.1
HL_9SS4_0471/D2/2027:2036No text annotation
homologous
HL_7A0S_049
HL_78372.2
HL_9SS4_0491/D2/2209:2215No text annotation
geometric
HL_8B0X_079
HL_42293.1
HL_9SS4_0501/D2/2248:2256LSU P loop
homologous
HL_7A0S_052
HL_11974.3
HL_9SS4_0511/D2/2264:2276No text annotation
homologous
HL_7A0S_053
HL_02042.2
HL_9SS4_0521/D2/2304:2312No text annotation
geometric
HL_8GLP_061
HL_02452.2
HL_9SS4_0531/D2/2324:2331Pseudoknot geometry
homologous
HL_7A0S_055
HL_52651.3
HL_9SS4_0541/D2/2356:2361No text annotation
geometric
HL_8B0X_084
HL_34789.5
HL_9SS4_0551/D2/2374:2379GNRA
homologous
HL_7A0S_057
HL_34789.5
HL_9SS4_0561/D2/2404:2413No text annotation
homologous
HL_7A0S_058
HL_51853.2
HL_9SS4_0571/D2/2471:2479No text annotation
homologous
HL_7A0S_059
HL_52011.2
HL_9SS4_0581/D2/2528:2535GNRA variation
homologous
HL_7A0S_060
HL_46665.3
HL_9SS4_0591/D2/2551:2557LSU A loop
homologous
HL_7A0S_061
HL_48677.2
HL_9SS4_0601/D2/2594:2599GNRA
homologous
HL_7A0S_062
HL_34789.5
HL_9SS4_0611/D2/2658:2663GNRA
homologous
HL_7A0S_063
HL_34789.5
HL_9SS4_0621/D2/2701:2706Ribsomal LSU H95
homologous
HL_7A0S_064
HL_12125.3
HL_9SS4_0631/D2/2745:2759No text annotation
homologous
HL_7A0S_065
HL_53269.3
HL_9SS4_0641/D2/2795:2801UNCG variation
geometric
HL_6VMY_004
HL_61337.5
HL_9SS4_0651/D2/2819:2827No text annotation
homologous
HL_7A0S_067
HL_37889.2
HL_9SS4_0661/D2/2856:2861GNRA
homologous
HL_7A0S_068
HL_34789.5
HL_9SS4_0671/D3/34:48No text annotation
geometric
HL_8B0X_102
HL_97756.4
HL_9SS4_0681/D3/38:44No text annotation
homologous
HL_4V9F_071
HL_59381.3
HL_9SS4_0691/D3/86:90No text annotation
geometric
HL_8B0X_098
HL_90436.4

Problematic loops

#loop idProblemSequence
HL_9SS4_015Mini UNCG with extended bulge
HL_9SS4_020GNRA with tandem sheared
HL_9SS4_024No text annotation
HL_9SS4_027No text annotation
HL_9SS4_029No text annotation
HL_9SS4_037UNCG
HL_9SS4_048No text annotation

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
IL_9SS4_0011/D2/24:30,
1/D2/510:516		Triple sheared with non-canonical cWW
homologous
IL_7A0S_001
IL_22311.2
IL_9SS4_0021/D2/36:37,
1/D2/442:444		Single bulged A
homologous
IL_7A0S_002
IL_14190.3
IL_9SS4_0031/D2/43:44,
1/D2/434:436		Minor groove platform
homologous
IL_7A0S_003
IL_34520.4
IL_9SS4_0041/D2/81:85,
1/D2/97:105		Kink-turn
homologous
IL_7A0S_004
IL_94910.1
IL_9SS4_0051/D2/183:184,
1/D2/212:214		Single stack bend
homologous
IL_7A0S_005
IL_15011.4
IL_9SS4_0061/D2/188:194,
1/D2/201:208		8x7 Sarcin-Ricin; G-bulge
homologous
IL_7A0S_006
IL_62167.4
IL_9SS4_0071/D2/239:245,
1/D2/253:258		7x6 Sarcin-Ricin; G-bulge
geometric
IL_8B0X_071
IL_02666.2
IL_9SS4_0081/D2/269:271,
1/D2/366:370		No text annotation
IL_9SS4_0091/D2/274:281,
1/D2/359:363		No text annotation
geometric
IL_8B0X_073
IL_22028.1
IL_9SS4_0101/D2/293:295,
1/D2/343:347		No text annotation
geometric
IL_8B0X_074
IL_76658.1
IL_9SS4_0111/D2/481:484,
1/D2/496:509		No text annotation
homologous
IL_7A0S_009
IL_44923.2
IL_9SS4_0121/D2/536:539,
1/D2/554:557		No text annotation
geometric
IL_8B0X_076
IL_58355.3
IL_9SS4_0131/D2/564:566,
1/D2/575:577		Isolated non-canonical cWW pair
homologous
IL_7A0S_011
IL_71625.4
IL_9SS4_0141/D2/606:610,
1/D2/618:622		AAA cross-strand stack
homologous
IL_7A0S_013
IL_66798.3
IL_9SS4_0151/D2/672:674,
1/D2/806:808		Isolated non-canonical cWW pair
homologous
IL_7A0S_014
IL_01003.5
IL_9SS4_0161/D2/674:678,
1/D2/799:806		tHW-tHW cross-strand stack
homologous
IL_7A0S_015
IL_73855.2
IL_9SS4_0171/D2/697:698,
1/D2/763:765		Single bulged A
homologous
IL_7A0S_016
IL_14190.3
IL_9SS4_0181/D2/702:703,
1/D2/728:730		Single bulged G
homologous
IL_7A0S_017
IL_28408.3
IL_9SS4_0191/D2/703:707,
1/D2/724:728		No text annotation
geometric
IL_8GLP_059
IL_15190.3
IL_9SS4_0201/D2/738:740,
1/D2/757:758		No text annotation
geometric
IL_8B0X_084
IL_48076.9
IL_9SS4_0211/D2/775:777,
1/D2/787:791		No text annotation
geometric
IL_9E6Q_032
IL_89509.2
IL_9SS4_0221/D2/844:847,
1/D2/933:934		No text annotation
geometric
IL_8B0X_087
IL_79144.1
IL_9SS4_0231/D2/844:848,
1/D2/930:934		No text annotation
geometric
IL_8B0X_179
IL_01742.1
IL_9SS4_0241/D2/847:848,
1/D2/930:933		No text annotation
geometric
IL_8B0X_088
IL_36175.2
IL_9SS4_0251/D2/850:851,
1/D2/926:928		No text annotation
geometric
IL_8B0X_089
IL_15011.4
IL_9SS4_0261/D2/856:862,
1/D2/915:921		7x7 Sarcin-Ricin with intercalated A; G-bulge
geometric
IL_8B0X_090
IL_94128.2
IL_9SS4_0271/D2/862:863,
1/D2/913:915		Minor groove platform
homologous
IL_7A0S_028
IL_34520.4
IL_9SS4_0281/D2/864:868,
1/D2/909:912		C-loop
homologous
IL_7A0S_029
IL_16301.2
IL_9SS4_0291/D2/870:872,
1/D2/905:907		Isolated non-canonical cWW pair
homologous
IL_7A0S_030
IL_42997.6
IL_9SS4_0301/D2/875:879,
1/D2/898:902		No text annotation
geometric
IL_8GLP_204
IL_87767.3
IL_9SS4_0321/D2/994:996,
1/D2/1159:1160		Single bulged C
homologous
IL_7A0S_032
IL_05642.4
IL_9SS4_0331/D2/998:1002,
1/D2/1153:1157		UAA/GAN
homologous
IL_7A0S_033
IL_08938.2
IL_9SS4_0341/D2/1004:1011,
1/D2/1150:1151		SSU/LSU pseudoknot
homologous
IL_7A0S_034
IL_46868.1
IL_9SS4_0351/D2/1011:1013,
1/D2/1149:1150		Single bulged U
homologous
IL_7A0S_035
IL_97561.6
IL_9SS4_0361/D2/1018:1024,
1/D2/1140:1144		Kink-turn related
homologous
IL_7A0S_036
IL_57188.6
IL_9SS4_0371/D2/1024:1030,
1/D2/1124:1140		No text annotation
geometric
IL_8B0X_101
IL_50715.4
IL_9SS4_0381/D2/1031:1034,
1/D2/1121:1123		Isolated non-canonical cWW pair
homologous
IL_7A0S_038
IL_76400.2
IL_9SS4_0391/D2/1038:1041,
1/D2/1114:1117		No text annotation
geometric
IL_8B0X_103
IL_15225.3
IL_9SS4_0401/D2/1043:1051,
1/D2/1108:1112		Kink-turn
geometric
IL_4V9F_042
IL_99692.3
IL_9SS4_0431/D2/1196:1198,
1/D2/1247:1250		Isolated cWS basepair
homologous
IL_7A0S_041
IL_42997.6
IL_9SS4_0441/D2/1202:1206,
1/D2/1240:1243		No text annotation
IL_9SS4_0451/D2/1208:1215,
1/D2/1234:1238		Kink-turn
homologous
IL_7A0S_043
IL_90775.2
IL_9SS4_0461/D2/1262:1269,
1/D2/2011:2017		8x7 Sarcin-Ricin; G-bulge
homologous
IL_7A0S_045
IL_62167.4
IL_9SS4_0471/D2/1310:1313,
1/D2/1603:1604		No text annotation
geometric
IL_9E6Q_008
IL_74641.3
IL_9SS4_0481/D2/1319:1323,
1/D2/1331:1333		C-loop
homologous
IL_7A0S_047
IL_06671.2
IL_9SS4_0491/D2/1351:1355,
1/D2/1376:1380		UAA/GAN
homologous
IL_7A0S_048
IL_89021.4
IL_9SS4_0501/D2/1357:1361,
1/D2/1370:1374		tSH-tWH-tHS
homologous
IL_7A0S_049
IL_05821.2
IL_9SS4_0511/D2/1415:1416,
1/D2/1582:1587		No text annotation
IL_9SS4_0521/D2/1417:1421,
1/D2/1577:1581		UAA/GAN
homologous
IL_7A0S_051
IL_08938.2
IL_9SS4_0531/D2/1432:1435,
1/D2/1557:1561		No text annotation
geometric
IL_8B0X_115
IL_28284.1
IL_9SS4_0541/D2/1437:1440,
1/D2/1551:1555		tSH-tHW
homologous
IL_7A0S_053
IL_74317.1
IL_9SS4_0551/D2/1450:1451,
1/D2/1459:1461		Single bulged U
geometric
IL_4C7O_001
IL_97561.6
IL_9SS4_0561/D2/1468:1471,
1/D2/1520:1524		No text annotation
geometric
IL_8B0X_118
IL_68574.5
IL_9SS4_0571/D2/1474:1478,
1/D2/1513:1517		Double sheared with near cWW
homologous
IL_7A0S_056
IL_87767.3
IL_9SS4_0581/D2/1481:1482,
1/D2/1507:1510		No text annotation
geometric
IL_8B0X_120
IL_52564.1
IL_9SS4_0591/D2/1489:1491,
1/D2/1499:1500		No text annotation
geometric
IL_8B0X_121
IL_14190.3
IL_9SS4_0601/D2/1526:1529,
1/D2/1542:1546		No text annotation
geometric
IL_8B0X_122
IL_45790.2
IL_9SS4_0611/D2/1651:1656,
1/D2/2004:2006		No text annotation
homologous
IL_7A0S_059
IL_12566.5
IL_9SS4_0621/D2/1663:1665,
1/D2/1995:1997		Isolated tWW turn
homologous
IL_7A0S_060
IL_10432.2
IL_9SS4_0631/D2/1666:1669,
1/D2/1993:1994		No text annotation
geometric
IL_9E6Q_063
IL_74641.3
IL_9SS4_0641/D2/1666:1674,
1/D2/1990:1994		No text annotation
geometric
IL_8B0X_180
IL_80252.2
IL_9SS4_0651/D2/1669:1674,
1/D2/1990:1993		Intercalated tWH
homologous
IL_7A0S_062
IL_28217.2
IL_9SS4_0661/D2/1686:1691,
1/D2/1696:1702		tSH-tSH-tHH-tHS
homologous
IL_7A0S_063
IL_20700.2
IL_9SS4_0671/D2/1712:1718,
1/D2/1742:1746		6x5 Sarcin-Ricin; G-bulge
geometric
IL_8B0X_128
IL_82100.1
IL_9SS4_0681/D2/1720:1724,
1/D2/1736:1740		No text annotation
geometric
IL_8B0X_129
IL_70744.1
IL_9SS4_0691/D2/1727:1728,
1/D2/1731:1733		No text annotation
geometric
IL_8B0X_130
IL_05642.4
IL_9SS4_0701/D2/1770:1771,
1/D2/1980:1982		Single bulged A
homologous
IL_7A0S_064
IL_14190.3
IL_9SS4_0711/D2/1798:1804,
1/D2/1813:1821		Kink-turn related
homologous
IL_7A0S_065
IL_17069.6
IL_9SS4_0741/D2/2050:2052,
1/D2/2617:2618		Major groove platform
homologous
IL_7A0S_073
IL_48076.9
IL_9SS4_0751/D2/2054:2056,
1/D2/2612:2615		No text annotation
geometric
IL_8B0X_140
IL_80025.2
IL_9SS4_0761/D2/2067:2069,
1/D2/2442:2443		Single bulged U
homologous
IL_7A0S_075
IL_97561.6
IL_9SS4_0771/D2/2070:2071,
1/D2/2438:2441		Minor groove platform
homologous
IL_7A0S_076
IL_34520.4
IL_9SS4_0781/D2/2081:2083,
1/D2/2236:2239		Isolated tHS basepair with bulges
homologous
IL_7A0S_077
IL_87316.3
IL_9SS4_0791/D2/2085:2087,
1/D2/2232:2234		Isolated non-canonical cWW pair
homologous
IL_7A0S_078
IL_71625.4
IL_9SS4_0831/D2/2202:2204,
1/D2/2220:2221		No text annotation
geometric
IL_8B0X_146
IL_97561.6
IL_9SS4_0841/D2/2350:2353,
1/D2/2364:2367		Double sheared
homologous
IL_7A0S_081
IL_58355.3
IL_9SS4_0851/D2/2401:2403,
1/D2/2414:2415		Single bulged U
geometric
IL_5LYS_008
IL_97561.6
IL_9SS4_0861/D2/2453:2454,
1/D2/2498:2500		Single stack bend
homologous
IL_7A0S_083
IL_15011.4
IL_9SS4_0871/D2/2454:2455,
1/D2/2496:2498		Major groove platform
homologous
IL_7A0S_084
IL_48076.9
IL_9SS4_0881/D2/2457:2459,
1/D2/2493:2494		Major groove platform
homologous
IL_7A0S_085
IL_48076.9
IL_9SS4_0891/D2/2459:2461,
1/D2/2489:2493		Major groove minor groove platform with extra cWW
homologous
IL_7A0S_086
IL_36931.3
IL_9SS4_0901/D2/2466:2470,
1/D2/2480:2484		Double sheared with non-canonical cWW
homologous
IL_7A0S_087
IL_87767.3
IL_9SS4_0911/D2/2507:2508,
1/D2/2580:2582		Major groove platform
homologous
IL_7A0S_088
IL_46637.3
IL_9SS4_0921/D2/2510:2512,
1/D2/2574:2578		Isolated non-canonical cWW with bulges
homologous
IL_7A0S_089
IL_68118.5
IL_9SS4_0931/D2/2512:2513,
1/D2/2571:2574		Multiple bulged bases
homologous
IL_7A0S_090
IL_44609.3
IL_9SS4_0941/D2/2522:2523,
1/D2/2540:2543		Major groove platform with intercalation
homologous
IL_7A0S_091
IL_94991.2
IL_9SS4_0951/D2/2591:2592,
1/D2/2601:2603		Single bulged A
geometric
IL_8P9A_399
IL_14190.3
IL_9SS4_0961/D2/2636:2640,
1/D2/2774:2782		tSH-tHS-tHW
homologous
IL_7A0S_093
IL_04638.4
IL_9SS4_0971/D2/2652:2658,
1/D2/2663:2668		Sarcin-Ricin target in LSU H95; G-bulge
homologous
IL_7A0S_094
IL_16458.6
IL_9SS4_0981/D2/2680:2684,
1/D2/2725:2727		C-loop
homologous
IL_7A0S_095
IL_63596.13
IL_9SS4_0991/D2/2687:2691,
1/D2/2718:2722		UAA/GAN related, with intercalation
homologous
IL_7A0S_096
IL_82016.1
IL_9SS4_1001/D2/2695:2696,
1/D2/2711:2714		Multiple bulged bases
homologous
IL_7A0S_097
IL_44609.3
IL_9SS4_1011/D2/2737:2742,
1/D2/2762:2767		UAA/GAN with extra cWW
homologous
IL_7A0S_098
IL_91079.1
IL_9SS4_1021/D2/2806:2811,
1/D2/2889:2892		No text annotation
IL_9SS4_1031/D2/2838:2839,
1/D2/2878:2880		Major groove intercalation
homologous
IL_7A0S_099
IL_28408.3
IL_9SS4_1041/D2/2843:2846,
1/D2/2870:2874		No text annotation
geometric
IL_8B0X_169
IL_60988.3
IL_9SS4_1051/D2/2847:2852,
1/D2/2865:2869		No text annotation
homologous
IL_7A0S_101
IL_48489.2
IL_9SS4_1061/D3/17:18,
1/D3/65:67		Major groove intercalation
homologous
IL_4V9F_101
IL_14190.3
IL_9SS4_1071/D3/23:28,
1/D3/56:60		No text annotation
geometric
IL_8B0X_172
IL_18472.5
IL_9SS4_1081/D3/30:31,
1/D3/51:54		Major groove minor groove platform; mini C-loop
homologous
IL_4V9F_103
IL_73108.3
IL_9SS4_1091/D3/34:38,
1/D3/44:48		Symmetric double minor groove platform
homologous
IL_7A0S_113
IL_58103.13
IL_9SS4_1101/D3/71:79,
1/D3/97:105		Bacterial 5S Loop E
homologous
IL_7A0S_106
IL_71138.1

Problematic loops

#loop idProblemSequence
IL_9SS4_031No text annotation
IL_9SS4_041No text annotation
IL_9SS4_042No text annotation
IL_9SS4_072Bulged stacked bases
IL_9SS4_073No text annotation
IL_9SS4_080No text annotation
IL_9SS4_081No text annotation
IL_9SS4_082No text annotation

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
J3_9SS4_0011/D2/30:31,
1/D2/474:481,
1/D2/509:510		No text annotation
homologous
J3_7A0S_001
J3_68715.2
J3_9SS4_0021/D2/32:35,
1/D2/445:461,
1/D2/468:473		No text annotation
homologous
J3_7A0S_016
J3_07616.2
J3_9SS4_0031/D2/56:57,
1/D2/70:76,
1/D2/110:114		No text annotation
homologous
J3_7A0S_002
J3_01004.2
J3_9SS4_0041/D2/297:301,
1/D2/316:325,
1/D2/337:341		No text annotation
geometric
J3_8B0X_034
J3_77124.1
J3_9SS4_0051/D2/683:689,
1/D2/773:775,
1/D2/791:794		No text annotation
homologous
J3_7A0S_004
J3_46658.2
J3_9SS4_0061/D2/698:700,
1/D2/732:736,
1/D2/760:763		No text annotation
homologous
J3_7A0S_005
J3_69816.2
J3_9SS4_0081/D2/1298:1303,
1/D2/1625:1627,
1/D2/1639:1642		No text annotation
homologous
J3_7A0S_006
J3_32852.7
J3_9SS4_0091/D2/1306:1309,
1/D2/1605:1611,
1/D2/1620:1622		No text annotation
homologous
J3_7A0S_007
J3_47341.1
J3_9SS4_0101/D2/1344:1349,
1/D2/1382:1385,
1/D2/1402:1403		No text annotation
J3_9SS4_0111/D2/1424:1429,
1/D2/1564:1565,
1/D2/1568:1574		No text annotation
homologous
J3_7A0S_019
J3_34864.3
J3_9SS4_0121/D2/2091:2093,
1/D2/2196:2200,
1/D2/2223:2228		No text annotation
homologous
J3_7A0S_009
J3_17460.1
J3_9SS4_0131/D2/2282:2284,
1/D2/2384:2395,
1/D2/2421:2427		No text annotation
homologous
J3_7A0S_020
J3_04772.2
J3_9SS4_0141/D2/2295:2299,
1/D2/2317:2323,
1/D2/2332:2337		No text annotation
J3_9SS4_0151/D2/2517:2520,
1/D2/2545:2547,
1/D2/2561:2567		No text annotation
homologous
J3_7A0S_011
J3_32601.6
J3_9SS4_0161/D2/2789:2791,
1/D2/2805:2806,
1/D2/2892:2894		No text annotation
J3_9SS4_0171/D2/2812:2815,
1/D2/2831:2836,
1/D2/2882:2888		No text annotation
J3_9SS4_0181/D3/10:16,
1/D3/68:70,
1/D3/106:110		No text annotation
J4_9SS4_0011/D2/268:269,
1/D2/370:375,
1/D2/399:406,
1/D2/421:424		No text annotation
homologous
J4_7A0S_001
J4_94698.2
J4_9SS4_0021/D2/601:604,
1/D2/624:628,
1/D2/635:638,
1/D2/650:656		No text annotation
J4_9SS4_0031/D2/1270:1276,
1/D2/1294:1295,
1/D2/1645:1648,
1/D2/2009:2010		No text annotation
homologous
J4_7A0S_004
J4_64571.6
J4_9SS4_0041/D2/1310:1314,
1/D2/1338:1343,
1/D2/1404:1405,
1/D2/1597:1604		No text annotation
J4_9SS4_0051/D2/1313:1314,
1/D2/1338:1343,
1/D2/1404:1405,
1/D2/1597:1603		No text annotation
homologous
J4_7A0S_006
J4_48150.2
J4_9SS4_0061/D2/1444:1445,
1/D2/1466:1467,
1/D2/1525:1526,
1/D2/1546:1547		No text annotation
J4_9SS4_0071/D2/1772:1776,
1/D2/1788:1792,
1/D2/1827:1830,
1/D2/1975:1979		No text annotation
homologous
J4_7A0S_008
J4_61477.6
J4_9SS4_0081/D2/2285:2289,
1/D2/2343:2347,
1/D2/2370:2372,
1/D2/2381:2383		No text annotation
homologous
J4_7A0S_009
J4_98139.1
J4_9SS4_0091/D2/2643:2646,
1/D2/2674:2676,
1/D2/2731:2735,
1/D2/2769:2771		No text annotation
J5_9SS4_0011/D2/47:54,
1/D2/116:121,
1/D2/130:131,
1/D2/148:150,
1/D2/176:178		No text annotation
J5_9SS4_0021/D2/531:533,
1/D2/560:564,
1/D2/577:579,
1/D2/1261:1262,
1/D2/2017:2018		No text annotation
homologous
J5_7A0S_003
J5_43153.6
J5_9SS4_0031/D2/584:589,
1/D2/668:671,
1/D2/809:812,
1/D2/1195:1196,
1/D2/1250:1256		No text annotation
homologous
J5_7A0S_004
J5_74302.6
J5_9SS4_0041/D2/1674:1682,
1/D2/1706:1707,
1/D2/1751:1752,
1/D2/1756:1764,
1/D2/1988:1990		No text annotation
homologous
J5_7A0S_005
J5_99177.2
J5_9SS4_0051/D2/2057:2064,
1/D2/2446:2453,
1/D2/2500:2507,
1/D2/2582:2588,
1/D2/2606:2611		No text annotation
J5_9SS4_0061/D2/2074:2077,
1/D2/2243:2246,
1/D2/2258:2259,
1/D2/2281:2282,
1/D2/2427:2435		No text annotation
homologous
J5_7A0S_007
J5_39529.2
J6_9SS4_0011/D2/45:46,
1/D2/179:183,
1/D2/214:224,
1/D2/231:235,
1/D2/262:266,
1/D2/426:433		No text annotation
J6_9SS4_0021/D2/2074:2077,
1/D2/2243:2246,
1/D2/2258:2259,
1/D2/2281:2284,
1/D2/2384:2395,
1/D2/2421:2435		No text annotation
J7_9SS4_0011/D2/8:15,
1/D2/525:531,
1/D2/2018:2023,
1/D2/2040:2043,
1/D2/2625:2630,
1/D2/2788:2789,
1/D2/2894:2895		No text annotation
J7_9SS4_0021/D2/817:822,
1/D2/835:838,
1/D2/940:946,
1/D2/971:976,
1/D2/987:991,
1/D2/1163:1164,
1/D2/1185:1190		No text annotation

Problematic loops

#loop idProblemSequence
J3_9SS4_007No text annotation

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