6CFK Internal, Hairpin and 3-way Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_6CFK_001 | 1/1A/58:67 | No text annotation Not in a motif group | homologous HL_7RQB_001 HL_29414.1 | |
| HL_6CFK_002 | 1/1A/86:94 | No text annotation Not in a motif group | homologous HL_7RQB_002 HL_17926.5 | |
| HL_6CFK_003 | 1/1A/121:126 | No text annotation Not in a motif group | homologous HL_7RQB_003 HL_62869.3 | |
| HL_6CFK_004 | 1/1A/136:141 | No text annotation Not in a motif group | homologous HL_7RQB_004 HL_86069.1 | |
| HL_6CFK_005 | 1/1A/183:190 | No text annotation Not in a motif group | geometric HL_7RQB_006 HL_23481.5 | |
| HL_6CFK_006 | 1/1A/214:219 | No text annotation Not in a motif group | homologous HL_7RQB_007 HL_06569.2 | |
| HL_6CFK_007 | 1/1A/235:241 | No text annotation Not in a motif group | homologous HL_7RQB_008 HL_67216.5 | |
| HL_6CFK_008 | 1/1A/269:275 | No text annotation Not in a motif group | geometric HL_5J7L_018 HL_93229.1 | |
| HL_6CFK_009 | 1/1A/329:336 | No text annotation Not in a motif group | homologous HL_7RQB_010 HL_68493.6 | |
| HL_6CFK_010 | 1/1A/343:347 | No text annotation Not in a motif group | homologous HL_7RQB_011 HL_98557.5 | |
| HL_6CFK_011 | 1/1A/351:359 | No text annotation Not in a motif group | homologous HL_7RQB_012 HL_08002.6 | |
| HL_6CFK_012 | 1/1A/409:419 | No text annotation Not in a motif group | homologous HL_7RQB_013 HL_91503.3 | |
| HL_6CFK_013 | 1/1A/437:444 | No text annotation Not in a motif group | homologous HL_7RQB_014 HL_32512.8 | |
| HL_6CFK_014 | 1/1A/488:493 | No text annotation Not in a motif group | homologous HL_7RQB_015 HL_43074.18 | |
| HL_6CFK_015 | 1/1A/513:518 | No text annotation Not in a motif group | homologous HL_7RQB_016 HL_43074.18 | |
| HL_6CFK_017 | 1/1A/589:598 | No text annotation Not in a motif group | geometric HL_7RQB_018 HL_33239.17 | |
| HL_6CFK_018 | 1/1A/635:641 | No text annotation Not in a motif group | homologous HL_7RQB_019 HL_49196.4 | |
| HL_6CFK_019 | 1/1A/654:659 | No text annotation Not in a motif group | homologous HL_7RQB_020 HL_43074.18 | |
| HL_6CFK_020 | 1/1A/666:672 | No text annotation Not in a motif group | homologous HL_7RQB_021 HL_02361.6 | |
| HL_6CFK_022 | 1/1A/759:766 | No text annotation Not in a motif group | homologous HL_7RQB_022 HL_93727.5 | |
| HL_6CFK_023 | 1/1A/791:800 | No text annotation Not in a motif group | homologous HL_7RQB_023 HL_39334.5 | |
| HL_6CFK_024 | 1/1A/826:832 | No text annotation Not in a motif group | homologous HL_7RQB_024 HL_16898.3 | |
| HL_6CFK_025 | 1/1A/873:878 | No text annotation Not in a motif group | homologous HL_7RQB_025 HL_15942.5 | |
| HL_6CFK_026 | 1/1A/931:938 | No text annotation Not in a motif group | homologous HL_7RQB_026 HL_24454.1 | |
| HL_6CFK_027 | 1/1A/1000:1007 | No text annotation Not in a motif group | homologous HL_7RQB_027 HL_43074.18 | |
| HL_6CFK_028 | 1/1A/1024:1031 | No text annotation Not in a motif group | homologous HL_7RQB_028 HL_72451.5 | |
| HL_6CFK_031 | 1/1A/1217:1223 | No text annotation Not in a motif group | homologous HL_7RQB_031 HL_01253.1 | |
| HL_6CFK_032 | 1/1A/1268:1273 | No text annotation Not in a motif group | homologous HL_7RQB_032 HL_43074.18 | |
| HL_6CFK_033 | 1/1A/1327:1335 | No text annotation Not in a motif group | homologous HL_7RQB_033 HL_33239.17 | |
| HL_6CFK_034 | 1/1A/1370:1376 | No text annotation Not in a motif group | homologous HL_7RQB_034 HL_86880.5 | |
| HL_6CFK_035 | 1/1A/1409:1414 | No text annotation Not in a motif group | homologous HL_7RQB_035 HL_43074.18 | |
| HL_6CFK_036 | 1/1A/1435:1444 | No text annotation Not in a motif group | homologous HL_7RQB_036 HL_78457.4 | |
| HL_6CFK_037 | 1/1A/1499:1506 | No text annotation Not in a motif group | geometric HL_7RQB_037 HL_71540.1 | |
| HL_6CFK_038 | 1/1A/1538:1544 | No text annotation Not in a motif group | homologous HL_7RQB_038 HL_86880.5 | |
| HL_6CFK_040 | 1/1A/1612:1615 | No text annotation Not in a motif group | homologous HL_7RQB_039 HL_69353.7 | |
| HL_6CFK_041 | 1/1A/1658:1665 | No text annotation Not in a motif group | homologous HL_7RQB_040 HL_66171.3 | |
| HL_6CFK_042 | 1/1A/1677:1682 | No text annotation Not in a motif group | homologous HL_7RQB_041 HL_86880.5 | |
| HL_6CFK_043 | 1/1A/1738:1743 | No text annotation Not in a motif group | geometric HL_7RQB_042 HL_79299.11 | |
| HL_6CFK_044 | 1/1A/1765:1771 | No text annotation Not in a motif group | homologous HL_7RQB_043 HL_49638.1 | |
| HL_6CFK_045 | 1/1A/1783:1787 | No text annotation Not in a motif group | homologous HL_7RQB_044 HL_79272.3 | |
| HL_6CFK_046 | 1/1A/1808:1818 | No text annotation Not in a motif group | homologous HL_7RQB_045 HL_43613.4 | |
| HL_6CFK_047 | 1/1A/1837:1842 | No text annotation Not in a motif group | homologous HL_7RQB_046 HL_43074.18 | |
| HL_6CFK_048 | 1/1A/1895:1900 | No text annotation Not in a motif group | homologous HL_7RQB_047 HL_43074.18 | |
| HL_6CFK_049 | 1/1A/1931:1943 | No text annotation Not in a motif group | homologous HL_7RQB_048 NA | |
| HL_6CFK_050 | 1/1A/1971:1979 | No text annotation Not in a motif group | homologous HL_7RQB_049 HL_53760.4 | |
| HL_6CFK_051 | 1/1A/2049:2058 | No text annotation Not in a motif group | homologous HL_7RQB_050 HL_90642.5 | |
| HL_6CFK_053 | 1/1A/2226:2231 | No text annotation Not in a motif group | homologous HL_7RQB_052 HL_82131.1 | |
| HL_6CFK_054 | 1/1A/2260:2268 | No text annotation Not in a motif group | homologous HL_7RQB_053 NA | |
| HL_6CFK_055 | 1/1A/2276:2288 | No text annotation Not in a motif group | homologous HL_7RQB_054 HL_19870.5 | |
| HL_6CFK_056 | 1/1A/2315:2325 | No text annotation Not in a motif group | homologous HL_7RQB_055 HL_11805.3 | |
| HL_6CFK_057 | 1/1A/2336:2343 | No text annotation Not in a motif group | homologous HL_7RQB_056 HL_46142.8 | |
| HL_6CFK_058 | 1/1A/2367:2374 | No text annotation Not in a motif group | homologous HL_7RQB_057 HL_93727.5 | |
| HL_6CFK_059 | 1/1A/2386:2391 | No text annotation Not in a motif group | homologous HL_7RQB_058 HL_43074.18 | |
| HL_6CFK_060 | 1/1A/2416:2425 | No text annotation Not in a motif group | homologous HL_7RQB_059 HL_48376.4 | |
| HL_6CFK_061 | 1/1A/2483:2491 | No text annotation Not in a motif group | homologous HL_7RQB_060 HL_36421.5 | |
| HL_6CFK_062 | 1/1A/2540:2547 | No text annotation Not in a motif group | homologous HL_7RQB_061 HL_92681.5 | |
| HL_6CFK_063 | 1/1A/2563:2569 | No text annotation Not in a motif group | homologous HL_5J7L_195 NA | |
| HL_6CFK_064 | 1/1A/2606:2611 | No text annotation Not in a motif group | homologous HL_7RQB_063 HL_43074.18 | |
| HL_6CFK_065 | 1/1A/2670:2675 | No text annotation Not in a motif group | homologous HL_7RQB_064 HL_43074.18 | |
| HL_6CFK_066 | 1/1A/2713:2718 | No text annotation Not in a motif group | homologous HL_7RQB_065 HL_31583.1 | |
| HL_6CFK_067 | 1/1A/2758:2772 | No text annotation Not in a motif group | homologous HL_7RQB_066 HL_56677.5 | |
| HL_6CFK_069 | 1/1A/2829:2837 | No text annotation Not in a motif group | homologous HL_7RQB_068 HL_05018.6 | |
| HL_6CFK_070 | 1/1A/2866:2871 | No text annotation Not in a motif group | homologous HL_7RQB_069 HL_43074.18 | |
| HL_6CFK_071 | 1/1B/38:44 | No text annotation Not in a motif group | geometric HL_7RQB_070 HL_02733.5 | |
| HL_6CFK_072 | 1/1B/86:91 | No text annotation Not in a motif group | homologous HL_7RQB_071 HL_43074.18 | |
| HL_6CFK_073 | 1/1a/12:22 | No text annotation Not in a motif group | homologous HL_4LFB_001 HL_67265.4 | |
| HL_6CFK_075 | 1/1a/158:163 | GNRA Not in a motif group | homologous HL_6CZR_074 HL_43074.18 | |
| HL_6CFK_076 | 1/1a/189C:189H | No text annotation Not in a motif group | homologous HL_6CZR_075 HL_44730.2 | |
| HL_6CFK_077 | 1/1a/200:217 | No text annotation Not in a motif group | homologous HL_6CZR_076 HL_37407.2 | |
| HL_6CFK_078 | 1/1a/259:267 | No text annotation Not in a motif group | homologous HL_4LFB_006 HL_93727.5 | |
| HL_6CFK_079 | 1/1a/296:301 | GNRA Not in a motif group | homologous HL_4LFB_007 HL_43074.18 | |
| HL_6CFK_080 | 1/1a/320:333 | No text annotation Not in a motif group | homologous HL_4LFB_008 HL_81205.2 | |
| HL_6CFK_082 | 1/1a/379:384 | GNRA Not in a motif group | homologous HL_4LFB_010 HL_43074.18 | |
| HL_6CFK_083 | 1/1a/419:424 | UNCG Not in a motif group | homologous HL_4LFB_011 HL_79299.11 | |
| HL_6CFK_084 | 1/1a/458:473 | No text annotation Not in a motif group | homologous HL_4LFB_012 HL_68304.6 | |
| HL_6CFK_085 | 1/1a/521:528 | No text annotation Not in a motif group | homologous HL_4LFB_013 NA | |
| HL_6CFK_086 | 1/1a/617:623 | No text annotation Not in a motif group | homologous HL_4LFB_014 HL_26055.6 | |
| HL_6CFK_087 | 1/1a/689:698 | No text annotation Not in a motif group | homologous HL_4LFB_015 HL_87219.4 | |
| HL_6CFK_088 | 1/1a/726:731 | Other HL Not in a motif group | homologous HL_4LFB_016 HL_43074.18 | |
| HL_6CFK_089 | 1/1a/786:796 | No text annotation Not in a motif group | homologous HL_4LFB_017 HL_87219.4 | |
| HL_6CFK_090 | 1/1a/838:848 | No text annotation Not in a motif group | homologous HL_6CZR_089 HL_18722.3 | |
| HL_6CFK_091 | 1/1a/862:867 | GNRA Not in a motif group | homologous HL_4LFB_019 HL_43074.18 | |
| HL_6CFK_092 | 1/1a/897:902 | GNRA Not in a motif group | homologous HL_5J7L_020 HL_43074.18 | |
| HL_6CFK_093 | 1/1a/963:972 | No text annotation Not in a motif group | homologous HL_4LFB_021 NA | |
| HL_6CFK_094 | 1/1a/1012:1017 | GNRA Not in a motif group | homologous HL_4LFB_022 HL_43074.18 | |
| HL_6CFK_095 | 1/1a/1076:1081 | GNRA Not in a motif group | homologous HL_4LFB_024 HL_43074.18 | |
| HL_6CFK_096 | 1/1a/1089:1096 | No text annotation Not in a motif group | homologous HL_4LFB_025 HL_54035.7 | |
| HL_6CFK_097 | 1/1a/1134:1140 | No text annotation Not in a motif group | homologous HL_6CZR_097 NA | |
| HL_6CFK_098 | 1/1a/1165:1171 | GNRA Not in a motif group | homologous HL_4LFB_027 HL_43074.18 | |
| HL_6CFK_099 | 1/1a/1265:1270 | Other HL Not in a motif group | homologous HL_4LFB_028 HL_43074.18 | |
| HL_6CFK_100 | 1/1a/1314:1323 | No text annotation Not in a motif group | homologous HL_4LFB_029 HL_78061.2 | |
| HL_6CFK_101 | 1/1a/1356:1366 | No text annotation Not in a motif group | homologous HL_4LFB_030 HL_70505.1 | |
| HL_6CFK_102 | 1/1a/1445:1457 | No text annotation Not in a motif group | homologous HL_6CZR_102 HL_16568.1 | |
| HL_6CFK_103 | 1/1a/1515:1520 | No text annotation Not in a motif group | homologous HL_4LFB_032 NA | |
| HL_6CFK_104 | 1/2A/59:68 | No text annotation Not in a motif group | homologous HL_7RQB_001 HL_29414.1 | |
| HL_6CFK_105 | 1/2A/87:95 | No text annotation Not in a motif group | homologous HL_7RQB_002 HL_17926.5 | |
| HL_6CFK_106 | 1/2A/123:128 | No text annotation Not in a motif group | homologous HL_7RQB_003 HL_62869.3 | |
| HL_6CFK_107 | 1/2A/139:142A | No text annotation Not in a motif group | homologous HL_7RQB_004 HL_86069.1 | |
| HL_6CFK_109 | 1/2A/194:201 | No text annotation Not in a motif group | geometric HL_7RQB_006 HL_23481.5 | |
| HL_6CFK_110 | 1/2A/225:230 | No text annotation Not in a motif group | homologous HL_7RQB_007 HL_06569.2 | |
| HL_6CFK_111 | 1/2A/246:252 | No text annotation Not in a motif group | homologous HL_7RQB_008 HL_67216.5 | |
| HL_6CFK_112 | 1/2A/271I:271O | No text annotation Not in a motif group | geometric HL_5J7L_018 HL_93229.1 | |
| HL_6CFK_113 | 1/2A/305:312 | No text annotation Not in a motif group | homologous HL_7RQB_010 HL_68493.6 | |
| HL_6CFK_114 | 1/2A/319:323 | No text annotation Not in a motif group | homologous HL_5J7L_143 HL_98557.5 | |
| HL_6CFK_115 | 1/2A/327:335 | No text annotation Not in a motif group | homologous HL_7RQB_012 HL_08002.6 | |
| HL_6CFK_116 | 1/2A/382:392 | No text annotation Not in a motif group | homologous HL_7RQB_013 HL_91503.3 | |
| HL_6CFK_117 | 1/2A/410:417 | No text annotation Not in a motif group | homologous HL_7RQB_014 HL_32512.8 | |
| HL_6CFK_118 | 1/2A/462:467 | No text annotation Not in a motif group | homologous HL_7RQB_015 HL_43074.18 | |
| HL_6CFK_119 | 1/2A/487:493 | No text annotation Not in a motif group | homologous HL_7RQB_016 HL_43074.18 | |
| HL_6CFK_121 | 1/2A/566:575 | No text annotation Not in a motif group | homologous HL_7RQB_018 HL_33239.17 | |
| HL_6CFK_122 | 1/2A/612:615 | No text annotation Not in a motif group | homologous HL_7RQB_019 HL_49196.4 | |
| HL_6CFK_123 | 1/2A/629:634 | No text annotation Not in a motif group | homologous HL_7RQB_020 HL_43074.18 | |
| HL_6CFK_124 | 1/2A/641:647 | No text annotation Not in a motif group | homologous HL_7RQB_021 HL_02361.6 | |
| HL_6CFK_126 | 1/2A/712:719 | No text annotation Not in a motif group | homologous HL_7RQB_022 HL_93727.5 | |
| HL_6CFK_127 | 1/2A/744:753 | No text annotation Not in a motif group | homologous HL_7RQB_023 HL_39334.5 | |
| HL_6CFK_128 | 1/2A/779:785 | No text annotation Not in a motif group | homologous HL_7RQB_024 HL_16898.3 | |
| HL_6CFK_129 | 1/2A/826:831 | No text annotation Not in a motif group | homologous HL_7RQB_025 HL_15942.5 | |
| HL_6CFK_130 | 1/2A/884:892 | No text annotation Not in a motif group | homologous HL_7RQB_026 HL_24454.1 | |
| HL_6CFK_131 | 1/2A/955:962 | No text annotation Not in a motif group | homologous HL_7RQB_027 HL_43074.18 | |
| HL_6CFK_132 | 1/2A/978:985 | No text annotation Not in a motif group | homologous HL_7RQB_028 HL_72451.5 | |
| HL_6CFK_136 | 1/2A/1222:1227 | No text annotation Not in a motif group | homologous HL_7RQB_032 HL_43074.18 | |
| HL_6CFK_137 | 1/2A/1281:1289 | No text annotation Not in a motif group | homologous HL_7RQB_033 HL_33239.17 | |
| HL_6CFK_138 | 1/2A/1324:1330 | No text annotation Not in a motif group | homologous HL_7RQB_034 HL_86880.5 | |
| HL_6CFK_139 | 1/2A/1363:1368 | No text annotation Not in a motif group | homologous HL_7RQB_035 HL_43074.18 | |
| HL_6CFK_140 | 1/2A/1389:1398 | No text annotation Not in a motif group | homologous HL_7RQB_036 HL_78457.4 | |
| HL_6CFK_141 | 1/2A/1451:1459 | No text annotation Not in a motif group | homologous HL_7RQB_037 HL_71540.1 | |
| HL_6CFK_142 | 1/2A/1492:1498 | No text annotation Not in a motif group | homologous HL_7RQB_038 HL_86880.5 | |
| HL_6CFK_144 | 1/2A/1565:1568 | No text annotation Not in a motif group | homologous HL_7RQB_039 HL_69353.7 | |
| HL_6CFK_145 | 1/2A/1612:1619 | No text annotation Not in a motif group | homologous HL_7RQB_040 HL_66171.3 | |
| HL_6CFK_146 | 1/2A/1631:1635 | No text annotation Not in a motif group | homologous HL_7RQB_041 HL_86880.5 | |
| HL_6CFK_147 | 1/2A/1691:1696 | No text annotation Not in a motif group | homologous HL_7RQB_042 HL_79299.11 | |
| HL_6CFK_148 | 1/2A/1720:1742 | No text annotation Not in a motif group | homologous HL_7RQB_043 HL_49638.1 | |
| HL_6CFK_149 | 1/2A/1752:1756 | No text annotation Not in a motif group | homologous HL_7RQB_044 HL_79272.3 | |
| HL_6CFK_150 | 1/2A/1777:1787 | No text annotation Not in a motif group | homologous HL_7RQB_045 HL_43613.4 | |
| HL_6CFK_151 | 1/2A/1806:1811 | No text annotation Not in a motif group | homologous HL_7RQB_046 HL_43074.18 | |
| HL_6CFK_152 | 1/2A/1864:1878 | No text annotation Not in a motif group | homologous HL_7RQB_047 HL_43074.18 | |
| HL_6CFK_153 | 1/2A/1909:1921 | No text annotation Not in a motif group | homologous HL_7RQB_048 NA | |
| HL_6CFK_154 | 1/2A/1949:1957 | No text annotation Not in a motif group | homologous HL_7RQB_049 HL_53760.4 | |
| HL_6CFK_155 | 1/2A/2027:2036 | No text annotation Not in a motif group | homologous HL_7RQB_050 HL_90642.5 | |
| HL_6CFK_157 | 1/2A/2205:2219 | No text annotation Not in a motif group | homologous HL_7RQB_052 HL_82131.1 | |
| HL_6CFK_158 | 1/2A/2248:2256 | No text annotation Not in a motif group | homologous HL_7RQB_053 NA | |
| HL_6CFK_159 | 1/2A/2264:2276 | No text annotation Not in a motif group | homologous HL_7RQB_054 HL_19870.5 | |
| HL_6CFK_160 | 1/2A/2302:2314 | No text annotation Not in a motif group | ||
| HL_6CFK_161 | 1/2A/2324:2331 | No text annotation Not in a motif group | homologous HL_7RQB_056 HL_46142.8 | |
| HL_6CFK_162 | 1/2A/2355:2362 | No text annotation Not in a motif group | homologous HL_7RQB_057 HL_93727.5 | |
| HL_6CFK_163 | 1/2A/2374:2379 | No text annotation Not in a motif group | homologous HL_7RQB_058 HL_43074.18 | |
| HL_6CFK_164 | 1/2A/2404:2413 | No text annotation Not in a motif group | homologous HL_7RQB_059 HL_48376.4 | |
| HL_6CFK_165 | 1/2A/2471:2479 | No text annotation Not in a motif group | homologous HL_7RQB_060 HL_36421.5 | |
| HL_6CFK_166 | 1/2A/2528:2535 | No text annotation Not in a motif group | homologous HL_7RQB_061 HL_92681.5 | |
| HL_6CFK_167 | 1/2A/2551:2557 | No text annotation Not in a motif group | homologous HL_5J7L_195 NA | |
| HL_6CFK_168 | 1/2A/2594:2599 | No text annotation Not in a motif group | homologous HL_7RQB_063 HL_43074.18 | |
| HL_6CFK_169 | 1/2A/2658:2663 | No text annotation Not in a motif group | homologous HL_7RQB_064 HL_43074.18 | |
| HL_6CFK_170 | 1/2A/2701:2706 | No text annotation Not in a motif group | homologous HL_7RQB_065 HL_31583.1 | |
| HL_6CFK_171 | 1/2A/2745:2759 | No text annotation Not in a motif group | homologous HL_7RQB_066 HL_56677.5 | |
| HL_6CFK_173 | 1/2A/2819:2827 | No text annotation Not in a motif group | homologous HL_7RQB_068 HL_05018.6 | |
| HL_6CFK_174 | 1/2A/2856:2861 | No text annotation Not in a motif group | homologous HL_7RQB_069 HL_43074.18 | |
| HL_6CFK_175 | 1/2B/38:44 | No text annotation Not in a motif group | geometric HL_7RQB_070 HL_02733.5 | |
| HL_6CFK_176 | 1/2B/86:91 | No text annotation Not in a motif group | homologous HL_7RQB_071 HL_43074.18 | |
| HL_6CFK_177 | 1/2a/12:22 | No text annotation Not in a motif group | homologous HL_4LFB_001 HL_67265.4 | |
| HL_6CFK_179 | 1/2a/158:163 | GNRA Not in a motif group | homologous HL_4LFB_003 HL_43074.18 | |
| HL_6CFK_180 | 1/2a/189C:189H | No text annotation Not in a motif group | homologous HL_6CZR_075 HL_44730.2 | |
| HL_6CFK_181 | 1/2a/201:216 | No text annotation Not in a motif group | homologous HL_4LFB_005 HL_57052.3 | |
| HL_6CFK_182 | 1/2a/259:267 | No text annotation Not in a motif group | homologous HL_4LFB_006 HL_93727.5 | |
| HL_6CFK_183 | 1/2a/296:301 | GNRA Not in a motif group | homologous HL_4LFB_007 HL_43074.18 | |
| HL_6CFK_184 | 1/2a/320:333 | No text annotation Not in a motif group | homologous HL_4LFB_008 HL_81205.2 | |
| HL_6CFK_185 | 1/2a/342:347 | UNCG Not in a motif group | homologous HL_4LFB_009 HL_79299.11 | |
| HL_6CFK_186 | 1/2a/379:384 | GNRA Not in a motif group | homologous HL_4LFB_010 HL_43074.18 | |
| HL_6CFK_187 | 1/2a/419:424 | UNCG Not in a motif group | homologous HL_4LFB_011 HL_79299.11 | |
| HL_6CFK_188 | 1/2a/458:473 | No text annotation Not in a motif group | homologous HL_4LFB_012 HL_68304.6 | |
| HL_6CFK_189 | 1/2a/521:528 | No text annotation Not in a motif group | geometric HL_5NFV_001 HL_58912.1 | |
| HL_6CFK_190 | 1/2a/617:623 | No text annotation Not in a motif group | homologous HL_4LFB_014 HL_26055.6 | |
| HL_6CFK_191 | 1/2a/689:698 | No text annotation Not in a motif group | homologous HL_4LFB_015 HL_87219.4 | |
| HL_6CFK_192 | 1/2a/726:731 | Other HL Not in a motif group | homologous HL_4LFB_016 HL_43074.18 | |
| HL_6CFK_193 | 1/2a/786:796 | No text annotation Not in a motif group | homologous HL_4LFB_017 HL_87219.4 | |
| HL_6CFK_194 | 1/2a/838:848 | No text annotation Not in a motif group | homologous HL_6CZR_089 HL_18722.3 | |
| HL_6CFK_195 | 1/2a/862:867 | GNRA Not in a motif group | homologous HL_4LFB_019 HL_43074.18 | |
| HL_6CFK_196 | 1/2a/897:902 | GNRA Not in a motif group | homologous HL_4LFB_020 HL_43074.18 | |
| HL_6CFK_197 | 1/2a/963:972 | No text annotation Not in a motif group | homologous HL_4LFB_021 NA | |
| HL_6CFK_198 | 1/2a/1012:1017 | GNRA Not in a motif group | homologous HL_4LFB_022 HL_43074.18 | |
| HL_6CFK_199 | 1/2a/1076:1081 | GNRA Not in a motif group | homologous HL_4LFB_024 HL_43074.18 | |
| HL_6CFK_200 | 1/2a/1089:1096 | No text annotation Not in a motif group | homologous HL_4LFB_025 HL_54035.7 | |
| HL_6CFK_201 | 1/2a/1134:1140 | No text annotation Not in a motif group | homologous HL_6CZR_097 NA | |
| HL_6CFK_202 | 1/2a/1165:1171 | GNRA Not in a motif group | homologous HL_4LFB_027 HL_43074.18 | |
| HL_6CFK_203 | 1/2a/1265:1270 | GNRA Not in a motif group | homologous HL_5J7L_027 HL_43074.18 | |
| HL_6CFK_204 | 1/2a/1314:1323 | No text annotation Not in a motif group | homologous HL_4LFB_029 HL_78061.2 | |
| HL_6CFK_205 | 1/2a/1356:1366 | No text annotation Not in a motif group | homologous HL_4LFB_030 HL_70505.1 | |
| HL_6CFK_206 | 1/2a/1445:1457 | No text annotation Not in a motif group | homologous HL_6CZR_102 HL_16568.1 | |
| HL_6CFK_207 | 1/2a/1515:1520 | No text annotation Not in a motif group | homologous HL_4LFB_032 NA |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_6CFK_016 | No text annotation | ||
| HL_6CFK_021 | No text annotation | ||
| HL_6CFK_029 | No text annotation | ||
| HL_6CFK_030 | No text annotation | ||
| HL_6CFK_039 | No text annotation | ||
| HL_6CFK_052 | No text annotation | ||
| HL_6CFK_068 | No text annotation | ||
| HL_6CFK_074 | No text annotation | ||
| HL_6CFK_081 | No text annotation | ||
| HL_6CFK_108 | No text annotation | ||
| HL_6CFK_120 | No text annotation | ||
| HL_6CFK_125 | No text annotation | ||
| HL_6CFK_133 | No text annotation | ||
| HL_6CFK_134 | No text annotation | ||
| HL_6CFK_135 | No text annotation | ||
| HL_6CFK_143 | No text annotation | ||
| HL_6CFK_156 | No text annotation | ||
| HL_6CFK_172 | No text annotation | ||
| HL_6CFK_178 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_6CFK_001 | 1/1A/24:30, 1/1A/535:541 | Triple sheared with non-canonical cWW Not in a motif group | homologous IL_7RQB_001 IL_66414.5 | |
| IL_6CFK_002 | 1/1A/36:37, 1/1A/468:470 | Single bulged A Not in a motif group | homologous IL_7RQB_002 IL_80007.16 | |
| IL_6CFK_003 | 1/1A/42:44, 1/1A/460:463 | Major groove platform with extra cWW Not in a motif group | geometric IL_4V9F_003 IL_95485.6 | |
| IL_6CFK_004 | 1/1A/80:84, 1/1A/96:103 | Kink-turn Not in a motif group | homologous IL_7RQB_004 IL_29549.9 | |
| IL_6CFK_005 | 1/1A/172:173, 1/1A/201:203 | Single stack bend Not in a motif group | homologous IL_7RQB_005 IL_04038.4 | |
| IL_6CFK_006 | 1/1A/177:183, 1/1A/190:197 | 8x7 Sarcin-Ricin; G-bulge Not in a motif group | homologous IL_7RQB_006 IL_04346.5 | |
| IL_6CFK_007 | 1/1A/228:234, 1/1A/242:247 | 7x6 Sarcin-Ricin; G-bulge Not in a motif group | homologous IL_7RQB_007 IL_35110.5 | |
| IL_6CFK_008 | 1/1A/291:292, 1/1A/392:394 | Major groove platform Not in a motif group | homologous IL_7RQB_009 IL_13730.12 | |
| IL_6CFK_010 | 1/1A/304:308, 1/1A/381:384 | tSH-tHW Not in a motif group | homologous IL_7RQB_011 IL_08757.3 | |
| IL_6CFK_011 | 1/1A/312:314, 1/1A/374:377 | Isolated tHS basepair with bulges Not in a motif group | homologous IL_7RQB_012 IL_38958.6 | |
| IL_6CFK_012 | 1/1A/317:319, 1/1A/367:371 | No text annotation Not in a motif group | homologous IL_7RQB_013 IL_69440.1 | |
| IL_6CFK_013 | 1/1A/507:510, 1/1A/521:534 | No text annotation Not in a motif group | homologous IL_7RQB_014 IL_60992.5 | |
| IL_6CFK_014 | 1/1A/587:589, 1/1A/598:600 | No text annotation Not in a motif group | homologous IL_7RQB_015 IL_01312.13 | |
| IL_6CFK_015 | 1/1A/629:633, 1/1A/643:647 | AAA cross-strand stack Not in a motif group | homologous IL_7RQB_016 IL_56467.6 | |
| IL_6CFK_016 | 1/1A/719:721, 1/1A/853:855 | No text annotation Not in a motif group | homologous IL_7RQB_017 IL_01312.13 | |
| IL_6CFK_017 | 1/1A/721:725, 1/1A/846:853 | No text annotation Not in a motif group | geometric IL_7RQB_018 IL_17470.5 | |
| IL_6CFK_018 | 1/1A/744:745, 1/1A/810:812 | Single bulged A Not in a motif group | homologous IL_7RQB_019 IL_80007.16 | |
| IL_6CFK_019 | 1/1A/749:750, 1/1A/775:777 | Single bulged G Not in a motif group | homologous IL_7RQB_020 IL_59137.10 | |
| IL_6CFK_020 | 1/1A/750:754, 1/1A/771:775 | Triple sheared Not in a motif group | geometric IL_7RQB_021 IL_56467.6 | |
| IL_6CFK_021 | 1/1A/785:788, 1/1A/803:805 | Major groove platform with extra cWW Not in a motif group | homologous IL_7RQB_022 IL_95485.6 | |
| IL_6CFK_022 | 1/1A/822:824, 1/1A/834:838 | Multiple bulged bases Not in a motif group | geometric IL_7RQB_023 IL_90991.5 | |
| IL_6CFK_023 | 1/1A/884:885, 1/1A/985:987 | Single stack bend Not in a motif group | homologous IL_7RQB_024 IL_04038.4 | |
| IL_6CFK_024 | 1/1A/891:893, 1/1A/976:979 | Intercalated cWW Not in a motif group | geometric IL_7RQB_025 IL_01312.13 | |
| IL_6CFK_025 | 1/1A/893:897, 1/1A/973:976 | No text annotation Not in a motif group | homologous IL_7RQB_026 IL_94165.1 | |
| IL_6CFK_026 | 1/1A/905:909, 1/1A/961:965 | 5x5 Sarcin-Ricin with intercalated A; G-bulge Not in a motif group | geometric IL_7RQB_027 IL_83354.1 | |
| IL_6CFK_027 | 1/1A/909:910, 1/1A/959:961 | Minor groove platform Not in a motif group | homologous IL_7RQB_028 IL_06437.11 | |
| IL_6CFK_028 | 1/1A/911:915, 1/1A/955:958 | C-loop Not in a motif group | homologous IL_7RQB_029 IL_63596.4 | |
| IL_6CFK_029 | 1/1A/917:919, 1/1A/951:953 | Isolated cWS basepair Not in a motif group | homologous IL_7RQB_030 IL_67621.5 | |
| IL_6CFK_030 | 1/1A/922:924, 1/1A/945:948 | Minor groove platform with extra cWW Not in a motif group | homologous IL_7RQB_031 IL_87332.1 | |
| IL_6CFK_031 | 1/1A/924:926, 1/1A/944:945 | Minor groove platform Not in a motif group | geometric IL_7RQB_032 IL_06437.11 | |
| IL_6CFK_032 | 1/1A/927:928, 1/1A/941:943 | Single bulged A Not in a motif group | homologous IL_7RQB_033 IL_80007.16 | |
| IL_6CFK_033 | 1/1A/997:999, 1/1A/1008:1010 | No text annotation Not in a motif group | homologous IL_7RQB_034 IL_01312.13 | |
| IL_6CFK_034 | 1/1A/1040:1042, 1/1A/1205:1206 | Single bulged C Not in a motif group | homologous IL_7RQB_035 IL_61258.10 | |
| IL_6CFK_035 | 1/1A/1044:1048, 1/1A/1199:1203 | UAA/GAN Not in a motif group | homologous IL_7RQB_036 IL_53523.5 | |
| IL_6CFK_036 | 1/1A/1050:1057, 1/1A/1196:1197 | SSU/LSU pseudoknot Not in a motif group | homologous IL_7RQB_037 IL_15861.6 | |
| IL_6CFK_037 | 1/1A/1057:1059, 1/1A/1195:1196 | Single bulged U Not in a motif group | geometric IL_7RQB_038 IL_83039.11 | |
| IL_6CFK_038 | 1/1A/1064:1070, 1/1A/1185:1190 | No text annotation Not in a motif group | homologous IL_7RQB_039 IL_57188.3 | |
| IL_6CFK_039 | 1/1A/1070:1076, 1/1A/1170:1185 | No text annotation Not in a motif group | geometric IL_7RQB_040 IL_55786.1 | |
| IL_6CFK_040 | 1/1A/1077:1080, 1/1A/1167:1169 | Isolated non-canonical cWW with bulges Not in a motif group | homologous IL_7RQB_041 IL_55456.1 | |
| IL_6CFK_041 | 1/1A/1089:1097, 1/1A/1154:1158 | Kink-turn Not in a motif group | homologous IL_7RQB_042 IL_90538.3 | |
| IL_6CFK_044 | 1/1A/1241:1243, 1/1A/1293:1296 | Isolated cWS basepair Not in a motif group | homologous IL_7RQB_045 IL_67621.5 | |
| IL_6CFK_045 | 1/1A/1247:1251, 1/1A/1286:1289 | No text annotation Not in a motif group | homologous IL_7RQB_046 IL_68574.2 | |
| IL_6CFK_046 | 1/1A/1253:1260, 1/1A/1280:1284 | Kink-turn Not in a motif group | homologous IL_7RQB_047 IL_29549.9 | |
| IL_6CFK_047 | 1/1A/1264:1266, 1/1A/1275:1276 | Single bulged A Not in a motif group | homologous IL_7RQB_048 IL_80007.16 | |
| IL_6CFK_048 | 1/1A/1308:1315, 1/1A/2033:2039 | 8x7 Sarcin-Ricin; G-bulge Not in a motif group | homologous IL_7RQB_049 IL_04346.5 | |
| IL_6CFK_049 | 1/1A/1356:1359, 1/1A/1649:1650 | Major groove platform; stack outside cWW Not in a motif group | homologous IL_7RQB_050 IL_70995.6 | |
| IL_6CFK_050 | 1/1A/1365:1369, 1/1A/1377:1379 | C-loop Not in a motif group | homologous IL_7RQB_051 IL_63596.4 | |
| IL_6CFK_051 | 1/1A/1397:1401, 1/1A/1422:1426 | UAA/GAN Not in a motif group | homologous IL_7RQB_052 IL_53523.5 | |
| IL_6CFK_052 | 1/1A/1403:1407, 1/1A/1416:1420 | tSH-tHW-tHS Not in a motif group | homologous IL_7RQB_053 IL_39521.5 | |
| IL_6CFK_053 | 1/1A/1461:1462, 1/1A/1629:1633 | No text annotation Not in a motif group | homologous IL_7RQB_054 IL_67474.3 | |
| IL_6CFK_054 | 1/1A/1463:1467, 1/1A/1624:1628 | UAA/GAN Not in a motif group | homologous IL_7RQB_055 IL_53523.5 | |
| IL_6CFK_055 | 1/1A/1479:1481, 1/1A/1604:1607 | Isolated tWW turn Not in a motif group | homologous IL_7RQB_056 IL_54997.5 | |
| IL_6CFK_056 | 1/1A/1483:1486, 1/1A/1598:1602 | tSH-tHW Not in a motif group | homologous IL_7RQB_057 IL_08757.3 | |
| IL_6CFK_057 | 1/1A/1495:1497, 1/1A/1509:1510 | Single stack bend Not in a motif group | homologous IL_7RQB_058 IL_31836.1 | |
| IL_6CFK_058 | 1/1A/1498:1499, 1/1A/1506:1508 | Single bulged A Not in a motif group | homologous IL_7RQB_059 IL_80007.16 | |
| IL_6CFK_059 | 1/1A/1516:1520, 1/1A/1566:1569 | UAA/GAN Not in a motif group | homologous IL_7RQB_060 IL_53523.5 | |
| IL_6CFK_060 | 1/1A/1528:1529, 1/1A/1552:1558 | No text annotation Not in a motif group | homologous IL_7RQB_061 IL_46464.1 | |
| IL_6CFK_061 | 1/1A/1535:1537, 1/1A/1545:1546 | Single bulged A Not in a motif group | homologous IL_7RQB_062 IL_40508.4 | |
| IL_6CFK_062 | 1/1A/1572:1576, 1/1A/1587:1593 | No text annotation Not in a motif group | homologous IL_7RQB_063 IL_89836.1 | |
| IL_6CFK_063 | 1/1A/1698:1703, 1/1A/2026:2028 | No text annotation Not in a motif group | homologous IL_7RQB_064 IL_12566.2 | |
| IL_6CFK_064 | 1/1A/1710:1712, 1/1A/2017:2019 | Isolated tWW turn Not in a motif group | homologous IL_7RQB_065 IL_54997.5 | |
| IL_6CFK_065 | 1/1A/1713:1716, 1/1A/2015:2016 | Major groove platform; stack outside cWW Not in a motif group | homologous IL_7RQB_066 IL_80663.10 | |
| IL_6CFK_066 | 1/1A/1716:1721, 1/1A/2012:2015 | Intercalated tWH Not in a motif group | geometric IL_7RQB_067 IL_01312.13 | |
| IL_6CFK_067 | 1/1A/1733:1738, 1/1A/1743:1749 | tSH-tSH-tHH-tHS Not in a motif group | homologous IL_7RQB_068 IL_66584.5 | |
| IL_6CFK_068 | 1/1A/1801:1802, 1/1A/2002:2004 | Single bulged A Not in a motif group | homologous IL_7RQB_069 IL_80007.16 | |
| IL_6CFK_069 | 1/1A/1829:1835, 1/1A/1844:1852 | Kink-turn related Not in a motif group | homologous IL_7RQB_070 IL_17069.3 | |
| IL_6CFK_070 | 1/1A/1868:1871, 1/1A/1924:1925 | Major groove outside cWW, minor groove, intercalation pocket Not in a motif group | homologous IL_7RQB_071 IL_31836.1 | |
| IL_6CFK_071 | 1/1A/1872:1873, 1/1A/1920:1923 | Major groove outside cWW, minor groove, intercalation pocket Not in a motif group | homologous IL_7RQB_072 IL_13730.12 | |
| IL_6CFK_072 | 1/1A/1877:1880, 1/1A/1915:1916 | Minor groove platform Not in a motif group | homologous IL_7RQB_073 IL_06437.11 | |
| IL_6CFK_073 | 1/1A/1882:1886, 1/1A/1909:1913 | UAA/GAN with extra pair Not in a motif group | homologous IL_7RQB_074 IL_34907.2 | |
| IL_6CFK_074 | 1/1A/1887:1891, 1/1A/1904:1908 | Triple sheared Not in a motif group | homologous IL_7RQB_075 IL_56467.6 | |
| IL_6CFK_075 | 1/1A/1955:1956, 1/1A/1986:1989 | Multiple bulged bases Not in a motif group | geometric IL_7RQB_076 IL_69632.1 | |
| IL_6CFK_076 | 1/1A/1956:1967, 1/1A/1983:1986 | No text annotation Not in a motif group | homologous IL_7RQB_077 NA | |
| IL_6CFK_077 | 1/1A/2072:2074, 1/1A/2629:2630 | Major groove platform Not in a motif group | homologous IL_7RQB_078 IL_80663.10 | |
| IL_6CFK_078 | 1/1A/2076:2079, 1/1A/2623:2627 | No text annotation Not in a motif group | homologous IL_7RQB_079 IL_01206.1 | |
| IL_6CFK_079 | 1/1A/2089:2091, 1/1A/2454:2455 | Single bulged U Not in a motif group | homologous IL_7RQB_080 IL_83039.11 | |
| IL_6CFK_080 | 1/1A/2092:2093, 1/1A/2450:2453 | Minor groove platform Not in a motif group | homologous IL_7RQB_081 IL_06437.11 | |
| IL_6CFK_081 | 1/1A/2103:2105, 1/1A/2248:2251 | Isolated tHS basepair with bulges Not in a motif group | homologous IL_7RQB_082 IL_38958.6 | |
| IL_6CFK_082 | 1/1A/2107:2109, 1/1A/2244:2246 | No text annotation Not in a motif group | homologous IL_7RQB_083 IL_01312.13 | |
| IL_6CFK_087 | 1/1A/2309:2311, 1/1A/2329:2333 | Isolated tHS basepair with bulges Not in a motif group | homologous IL_7RQB_088 IL_38958.6 | |
| IL_6CFK_088 | 1/1A/2362:2365, 1/1A/2376:2379 | Double sheared Not in a motif group | homologous IL_7RQB_089 IL_09705.7 | |
| IL_6CFK_089 | 1/1A/2413:2415, 1/1A/2426:2427 | Major groove platform Not in a motif group | homologous IL_7RQB_090 IL_80663.10 | |
| IL_6CFK_090 | 1/1A/2465:2466, 1/1A/2510:2512 | Single stack bend Not in a motif group | homologous IL_7RQB_091 IL_04038.4 | |
| IL_6CFK_091 | 1/1A/2466:2467, 1/1A/2508:2510 | Major groove platform Not in a motif group | geometric IL_7RQB_092 IL_80663.10 | |
| IL_6CFK_092 | 1/1A/2468:2471, 1/1A/2505:2507 | Major groove platform with extra pair Not in a motif group | homologous IL_7RQB_093 IL_87630.5 | |
| IL_6CFK_093 | 1/1A/2471:2473, 1/1A/2501:2505 | Major groove minor groove platform with extra cWW Not in a motif group | geometric IL_7RQB_094 IL_96042.4 | |
| IL_6CFK_094 | 1/1A/2478:2482, 1/1A/2492:2496 | Triple sheared Not in a motif group | homologous IL_7RQB_095 IL_56467.6 | |
| IL_6CFK_095 | 1/1A/2519:2520, 1/1A/2592:2594 | Major groove platform Not in a motif group | homologous IL_7RQB_096 IL_02060.4 | |
| IL_6CFK_096 | 1/1A/2522:2524, 1/1A/2586:2590 | Isolated non-canonical cWW with bulges Not in a motif group | homologous IL_7RQB_097 IL_01312.13 | |
| IL_6CFK_097 | 1/1A/2524:2525, 1/1A/2583:2586 | Multiple bulged bases Not in a motif group | geometric IL_7RQB_098 IL_13730.12 | |
| IL_6CFK_098 | 1/1A/2534:2535, 1/1A/2552:2555 | Minor groove platform with intercalation Not in a motif group | homologous IL_7RQB_099 IL_95601.1 | |
| IL_6CFK_099 | 1/1A/2600:2602, 1/1A/2616:2618 | No text annotation Not in a motif group | homologous IL_7RQB_100 NA | |
| IL_6CFK_100 | 1/1A/2603:2604, 1/1A/2613:2615 | Single bulged A Not in a motif group | geometric IL_4V9F_090 IL_80007.16 | |
| IL_6CFK_101 | 1/1A/2648:2652, 1/1A/2787:2795 | tSH-tHS-tHW Not in a motif group | homologous IL_7RQB_102 IL_34907.2 | |
| IL_6CFK_102 | 1/1A/2664:2670, 1/1A/2675:2680 | Sarcin-Ricin target in LSU H95; G-bulge Not in a motif group | geometric IL_7RQB_103 IL_35110.5 | |
| IL_6CFK_103 | 1/1A/2692:2696, 1/1A/2738:2740 | C-loop Not in a motif group | homologous IL_7RQB_104 IL_63596.4 | |
| IL_6CFK_104 | 1/1A/2699:2703, 1/1A/2731:2735 | No text annotation Not in a motif group | homologous IL_7RQB_105 IL_08296.3 | |
| IL_6CFK_105 | 1/1A/2707:2708, 1/1A/2723:2727 | No text annotation Not in a motif group | ||
| IL_6CFK_106 | 1/1A/2750:2755, 1/1A/2775:2780 | UAA/GAN with extra cWW Not in a motif group | homologous IL_7RQB_107 IL_49767.4 | |
| IL_6CFK_107 | 1/1A/2848:2849, 1/1A/2888:2890 | Single bulged C Not in a motif group | homologous IL_7RQB_108 IL_61258.10 | |
| IL_6CFK_108 | 1/1A/2853:2856, 1/1A/2880:2884 | No text annotation Not in a motif group | homologous IL_7RQB_109 IL_58764.1 | |
| IL_6CFK_109 | 1/1A/2857:2862, 1/1A/2875:2879 | No text annotation Not in a motif group | homologous IL_7RQB_110 IL_83162.3 | |
| IL_6CFK_110 | 1/1B/17:18, 1/1B/65:67 | Major groove intercalation Not in a motif group | homologous IL_7RQB_111 IL_80007.16 | |
| IL_6CFK_112 | 1/1B/30:31, 1/1B/51:54 | Major groove minor groove platform; mini C-loop Not in a motif group | homologous IL_7RQB_113 IL_09061.4 | |
| IL_6CFK_113 | 1/1B/34:38, 1/1B/44:48 | Symmetric double minor groove platform Not in a motif group | homologous IL_7RQB_114 IL_58103.5 | |
| IL_6CFK_114 | 1/1B/71:79, 1/1B/98:106 | Bacterial 5S Loop E Not in a motif group | homologous IL_7RQB_115 IL_56455.3 | |
| IL_6CFK_115 | 1/1a/30:32, 1/1a/552:553 | Single bulged G Not in a motif group | homologous IL_4LFB_001 IL_59137.10 | |
| IL_6CFK_116 | 1/1a/44:45, 1/1a/396:398 | Single bulged A Not in a motif group | homologous IL_4LFB_002 IL_80007.16 | |
| IL_6CFK_117 | 1/1a/47:52, 1/1a/359:361 | No text annotation Not in a motif group | homologous IL_4LFB_003 IL_34626.4 | |
| IL_6CFK_118 | 1/1a/54:56, 1/1a/356:357 | Minor groove platform Not in a motif group | homologous IL_4LFB_004 IL_06437.11 | |
| IL_6CFK_119 | 1/1a/63:66, 1/1a/103:104 | Multiple bulged bases Not in a motif group | homologous IL_4LFB_005 IL_13730.12 | |
| IL_6CFK_120 | 1/1a/67:69, 1/1a/100:102 | No text annotation Not in a motif group | homologous IL_4LFB_006 IL_01312.13 | |