Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
HL_4V7K_0011/AA/59:68No text annotation
Not in a motif group
homologous
HL_7RQB_001
HL_29414.1
HL_4V7K_0021/AA/87:95No text annotation
Not in a motif group
homologous
HL_7RQB_002
HL_17926.5
HL_4V7K_0031/AA/123:128No text annotation
Not in a motif group
homologous
HL_7RQB_003
HL_62869.3
HL_4V7K_0041/AA/139:142ANo text annotation
Not in a motif group
homologous
HL_7RQB_004
HL_86069.1
HL_4V7K_0051/AA/154A:171No text annotation
Not in a motif group
HL_4V7K_0061/AA/194:201No text annotation
Not in a motif group
homologous
HL_7RQB_006
HL_23481.5
HL_4V7K_0071/AA/225:230No text annotation
Not in a motif group
homologous
HL_7RQB_007
HL_06569.2
HL_4V7K_0081/AA/246:252No text annotation
Not in a motif group
homologous
HL_7RQB_008
HL_67216.5
HL_4V7K_0091/AA/271J:271MNo text annotation
Not in a motif group
homologous
HL_7RQB_009
HL_69353.7
HL_4V7K_0101/AA/305:312No text annotation
Not in a motif group
homologous
HL_7RQB_010
HL_68493.6
HL_4V7K_0111/AA/319:323No text annotation
Not in a motif group
homologous
HL_7RQB_011
HL_98557.5
HL_4V7K_0121/AA/327:335No text annotation
Not in a motif group
homologous
HL_7RQB_012
HL_08002.6
HL_4V7K_0131/AA/382:392No text annotation
Not in a motif group
homologous
HL_7RQB_013
HL_91503.3
HL_4V7K_0141/AA/410:417No text annotation
Not in a motif group
homologous
HL_7RQB_014
HL_32512.8
HL_4V7K_0151/AA/462:467GNRA
Not in a motif group
homologous
HL_5J7L_147
HL_43074.18
HL_4V7K_0161/AA/487:493No text annotation
Not in a motif group
homologous
HL_7RQB_016
HL_43074.18
HL_4V7K_0171/AA/543:549No text annotation
Not in a motif group
homologous
HL_7RQB_017
NA
HL_4V7K_0181/AA/566:575No text annotation
Not in a motif group
homologous
HL_7RQB_018
HL_33239.17
HL_4V7K_0191/AA/612:615No text annotation
Not in a motif group
homologous
HL_7RQB_019
HL_49196.4
HL_4V7K_0201/AA/629:634No text annotation
Not in a motif group
homologous
HL_7RQB_020
HL_43074.18
HL_4V7K_0211/AA/641:647No text annotation
Not in a motif group
homologous
HL_7RQB_021
HL_02361.6
HL_4V7K_0231/AA/712:719No text annotation
Not in a motif group
homologous
HL_7RQB_022
HL_93727.5
HL_4V7K_0241/AA/744:753No text annotation
Not in a motif group
homologous
HL_7RQB_023
HL_39334.5
HL_4V7K_0251/AA/779:785No text annotation
Not in a motif group
homologous
HL_7A0S_023
HL_77081.1
HL_4V7K_0261/AA/826:831No text annotation
Not in a motif group
homologous
HL_7RQB_025
HL_15942.5
HL_4V7K_0271/AA/884:892No text annotation
Not in a motif group
HL_4V7K_0281/AA/955:962No text annotation
Not in a motif group
homologous
HL_7RQB_027
HL_43074.18
HL_4V7K_0291/AA/978:985No text annotation
Not in a motif group
homologous
HL_7RQB_028
HL_72451.5
HL_4V7K_0301/AA/1043:1112No text annotation
Not in a motif group
HL_4V7K_0311/AA/1171:1178No text annotation
Not in a motif group
HL_4V7K_0321/AA/1222:1227No text annotation
Not in a motif group
homologous
HL_7RQB_032
HL_43074.18
HL_4V7K_0331/AA/1281:1289No text annotation
Not in a motif group
homologous
HL_7RQB_033
HL_33239.17
HL_4V7K_0341/AA/1324:1330No text annotation
Not in a motif group
homologous
HL_7RQB_034
HL_86880.5
HL_4V7K_0351/AA/1363:1368Other HL
Not in a motif group
homologous
HL_5J7L_167
HL_43074.18
HL_4V7K_0361/AA/1389:1398No text annotation
Not in a motif group
homologous
HL_7RQB_036
HL_78457.4
HL_4V7K_0371/AA/1450A:1461No text annotation
Not in a motif group
HL_4V7K_0381/AA/1492:1498No text annotation
Not in a motif group
HL_4V7K_0391/AA/1531:1538No text annotation
Not in a motif group
geometric
HL_4WF9_053
HL_93727.5
HL_4V7K_0401/AA/1565:1568No text annotation
Not in a motif group
homologous
HL_7A0S_039
HL_69353.7
HL_4V7K_0411/AA/1612:1619No text annotation
Not in a motif group
homologous
HL_7RQB_040
HL_66171.3
HL_4V7K_0421/AA/1631:1635No text annotation
Not in a motif group
homologous
HL_7RQB_041
HL_86880.5
HL_4V7K_0431/AA/1691:1696No text annotation
Not in a motif group
geometric
HL_7RQB_042
HL_79299.11
HL_4V7K_0441/AA/1718:1744No text annotation
Not in a motif group
HL_4V7K_0451/AA/1752:1756No text annotation
Not in a motif group
homologous
HL_7RQB_044
HL_79272.3
HL_4V7K_0461/AA/1777:1787No text annotation
Not in a motif group
homologous
HL_4WF9_043
HL_43613.4
HL_4V7K_0471/AA/1806:1811No text annotation
Not in a motif group
homologous
HL_7RQB_046
HL_43074.18
HL_4V7K_0481/AA/1863:1879No text annotation
Not in a motif group
geometric
HL_7A0S_056
HL_93727.5
HL_4V7K_0491/AA/1910:1920No text annotation
Not in a motif group
geometric
HL_5TBW_049
HL_98248.1
HL_4V7K_0501/AA/1949:1957No text annotation
Not in a motif group
homologous
HL_7RQB_049
HL_53760.4
HL_4V7K_0511/AA/2027:2036No text annotation
Not in a motif group
homologous
HL_7RQB_050
HL_90642.5
HL_4V7K_0521/AA/2143:2148No text annotation
Not in a motif group
homologous
HL_7RQB_051
NA
HL_4V7K_0531/AA/2205:2219No text annotation
Not in a motif group
geometric
HL_6U8D_003
HL_18722.3
HL_4V7K_0541/AA/2248:2256No text annotation
Not in a motif group
homologous
HL_7RQB_053
NA
HL_4V7K_0551/AA/2264:2276No text annotation
Not in a motif group
homologous
HL_7RQB_054
HL_19870.5
HL_4V7K_0561/AA/2303:2313No text annotation
Not in a motif group
homologous
HL_4WF9_051
NA
HL_4V7K_0571/AA/2324:2331No text annotation
Not in a motif group
homologous
HL_7RQB_056
HL_46142.8
HL_4V7K_0581/AA/2355:2362No text annotation
Not in a motif group
homologous
HL_7RQB_057
HL_93727.5
HL_4V7K_0591/AA/2374:2379GNRA
Not in a motif group
homologous
HL_5J7L_191
HL_43074.18
HL_4V7K_0601/AA/2404:2413No text annotation
Not in a motif group
homologous
HL_7RQB_059
HL_48376.4
HL_4V7K_0611/AA/2471:2479No text annotation
Not in a motif group
homologous
HL_7RQB_060
HL_36421.5
HL_4V7K_0621/AA/2528:2535No text annotation
Not in a motif group
homologous
HL_7RQB_061
HL_92681.5
HL_4V7K_0631/AA/2551:2557No text annotation
Not in a motif group
homologous
HL_4WF9_058
HL_26055.6
HL_4V7K_0641/AA/2594:2599No text annotation
Not in a motif group
homologous
HL_7RQB_063
HL_43074.18
HL_4V7K_0651/AA/2658:2663GNRA
Not in a motif group
homologous
HL_5J7L_197
HL_43074.18
HL_4V7K_0661/AA/2701:2706No text annotation
Not in a motif group
homologous
HL_7RQB_065
HL_31583.1
HL_4V7K_0671/AA/2745:2759No text annotation
Not in a motif group
homologous
HL_7RQB_066
HL_56677.5
HL_4V7K_0691/AA/2819:2827No text annotation
Not in a motif group
homologous
HL_7RQB_068
HL_05018.6
HL_4V7K_0701/AA/2856:2861No text annotation
Not in a motif group
homologous
HL_7RQB_069
HL_43074.18
HL_4V7K_0711/AB/38:44No text annotation
Not in a motif group
homologous
HL_7RQB_070
HL_02733.5
HL_4V7K_0721/AB/86:91No text annotation
Not in a motif group
homologous
HL_7A0S_070
HL_43074.18
HL_4V7K_0731/Aa/12:22No text annotation
Not in a motif group
homologous
HL_5J7L_001
HL_67265.4
HL_4V7K_0741/Aa/77:92No text annotation
Not in a motif group
HL_4V7K_0751/Aa/158:163GNRA
Not in a motif group
homologous
HL_4LFB_003
HL_43074.18
HL_4V7K_0761/Aa/189C:189HNo text annotation
Not in a motif group
homologous
HL_6CZR_075
HL_44730.2
HL_4V7K_0771/Aa/200:217No text annotation
Not in a motif group
homologous
HL_6CZR_076
HL_37407.2
HL_4V7K_0781/Aa/259:267No text annotation
Not in a motif group
homologous
HL_4LFB_006
HL_93727.5
HL_4V7K_0791/Aa/296:301GNRA
Not in a motif group
homologous
HL_5J7L_007
HL_43074.18
HL_4V7K_0801/Aa/320:333No text annotation
Not in a motif group
homologous
HL_4LFB_008
HL_81205.2
HL_4V7K_0811/Aa/342:347UNCG
Not in a motif group
homologous
HL_4LFB_009
HL_79299.11
HL_4V7K_0821/Aa/379:384GNRA
Not in a motif group
homologous
HL_4LFB_010
HL_43074.18
HL_4V7K_0831/Aa/419:424UNCG
Not in a motif group
homologous
HL_5J7L_011
HL_79299.11
HL_4V7K_0841/Aa/458:473No text annotation
Not in a motif group
homologous
HL_4LFB_012
HL_68304.6
HL_4V7K_0851/Aa/522:527No text annotation
Not in a motif group
geometric
HL_5J7L_143
HL_98557.5
HL_4V7K_0861/Aa/617:623No text annotation
Not in a motif group
homologous
HL_4LFB_014
HL_26055.6
HL_4V7K_0871/Aa/689:698No text annotation
Not in a motif group
homologous
HL_4LFB_015
HL_87219.4
HL_4V7K_0881/Aa/726:731Other HL
Not in a motif group
homologous
HL_4LFB_016
HL_43074.18
HL_4V7K_0891/Aa/786:796No text annotation
Not in a motif group
homologous
HL_4LFB_017
HL_87219.4
HL_4V7K_0901/Aa/838:848No text annotation
Not in a motif group
homologous
HL_4LFB_018
HL_18722.3
HL_4V7K_0911/Aa/862:867GNRA
Not in a motif group
homologous
HL_4LFB_019
HL_43074.18
HL_4V7K_0921/Aa/897:902GNRA
Not in a motif group
homologous
HL_4LFB_020
HL_43074.18
HL_4V7K_0931/Aa/963:972No text annotation
Not in a motif group
homologous
HL_4LFB_021
NA
HL_4V7K_0941/Aa/1012:1017GNRA
Not in a motif group
homologous
HL_4LFB_022
HL_43074.18
HL_4V7K_0951/Aa/1076:1081GNRA
Not in a motif group
homologous
HL_4LFB_024
HL_43074.18
HL_4V7K_0961/Aa/1089:1096No text annotation
Not in a motif group
homologous
HL_4LFB_025
HL_54035.7
HL_4V7K_0971/Aa/1128:1143No text annotation
Not in a motif group
HL_4V7K_0981/Aa/1165:1171No text annotation
Not in a motif group
HL_4V7K_0991/Aa/1265:1270Other HL
Not in a motif group
homologous
HL_4LFB_028
HL_43074.18
HL_4V7K_1001/Aa/1314:1323No text annotation
Not in a motif group
homologous
HL_4LFB_029
HL_78061.2
HL_4V7K_1011/Aa/1356:1366No text annotation
Not in a motif group
homologous
HL_4LFB_030
HL_70505.1
HL_4V7K_1021/Aa/1445:1457UNCG
Not in a motif group
homologous
HL_5J7L_030
HL_79299.11
HL_4V7K_1031/Aa/1515:1520No text annotation
Not in a motif group
homologous
HL_4LFB_032
NA
HL_4V7K_1041/Av/13:22No text annotation
Not in a motif group
homologous
HL_6CFJ_106
HL_51876.1
HL_4V7K_1051/Av/30:40No text annotation
Not in a motif group
homologous
HL_5IB8_208
NA
HL_4V7K_1061/Av/53:61T-loop with 2 stacked bulged bases
Not in a motif group
homologous
HL_4YCO_003
HL_33239.17
HL_4V7K_1071/Aw/13:22No text annotation
Not in a motif group
homologous
HL_4V9Q_213
HL_51876.1
HL_4V7K_1081/Aw/30:40No text annotation
Not in a motif group
homologous
HL_4V7M_039
HL_50622.6
HL_4V7K_1091/Aw/53:61T-loop with 2 stacked bulged bases
Not in a motif group
homologous
HL_4YCO_003
HL_33239.17
HL_4V7K_1101/BA/59:68No text annotation
Not in a motif group
homologous
HL_7RQB_001
HL_29414.1
HL_4V7K_1111/BA/87:95No text annotation
Not in a motif group
homologous
HL_7RQB_002
HL_17926.5
HL_4V7K_1121/BA/123:128No text annotation
Not in a motif group
homologous
HL_7RQB_003
HL_62869.3
HL_4V7K_1131/BA/139:142ANo text annotation
Not in a motif group
homologous
HL_7RQB_004
HL_86069.1
HL_4V7K_1151/BA/194:201No text annotation
Not in a motif group
geometric
HL_7RQB_006
HL_23481.5
HL_4V7K_1161/BA/225:230No text annotation
Not in a motif group
homologous
HL_7RQB_007
HL_06569.2
HL_4V7K_1171/BA/246:252No text annotation
Not in a motif group
homologous
HL_7RQB_008
HL_67216.5
HL_4V7K_1181/BA/271J:271MNo text annotation
Not in a motif group
geometric
HL_6U8D_003
HL_18722.3
HL_4V7K_1191/BA/305:312No text annotation
Not in a motif group
homologous
HL_7RQB_010
HL_68493.6
HL_4V7K_1201/BA/319:323No text annotation
Not in a motif group
homologous
HL_7RQB_011
HL_98557.5
HL_4V7K_1211/BA/327:335No text annotation
Not in a motif group
homologous
HL_7RQB_012
HL_08002.6
HL_4V7K_1221/BA/382:392No text annotation
Not in a motif group
homologous
HL_7RQB_013
HL_91503.3
HL_4V7K_1231/BA/410:417No text annotation
Not in a motif group
homologous
HL_7RQB_014
HL_32512.8
HL_4V7K_1241/BA/462:467GNRA
Not in a motif group
homologous
HL_5J7L_147
HL_43074.18
HL_4V7K_1251/BA/487:493No text annotation
Not in a motif group
homologous
HL_7RQB_016
HL_43074.18
HL_4V7K_1271/BA/566:575No text annotation
Not in a motif group
geometric
HL_7RQB_018
HL_33239.17
HL_4V7K_1281/BA/612:615No text annotation
Not in a motif group
homologous
HL_7RQB_019
HL_49196.4
HL_4V7K_1291/BA/629:634No text annotation
Not in a motif group
homologous
HL_7RQB_020
HL_43074.18
HL_4V7K_1301/BA/641:647No text annotation
Not in a motif group
homologous
HL_7RQB_021
HL_02361.6
HL_4V7K_1321/BA/712:719No text annotation
Not in a motif group
homologous
HL_7RQB_022
HL_93727.5
HL_4V7K_1331/BA/744:753No text annotation
Not in a motif group
homologous
HL_7RQB_023
HL_39334.5
HL_4V7K_1341/BA/779:785No text annotation
Not in a motif group
homologous
HL_7A0S_023
HL_77081.1
HL_4V7K_1351/BA/826:831No text annotation
Not in a motif group
homologous
HL_7RQB_025
HL_15942.5
HL_4V7K_1361/BA/884:892No text annotation
Not in a motif group
HL_4V7K_1371/BA/955:962No text annotation
Not in a motif group
homologous
HL_7RQB_027
HL_43074.18
HL_4V7K_1381/BA/978:985No text annotation
Not in a motif group
homologous
HL_7RQB_028
HL_72451.5
HL_4V7K_1391/BA/1043:1112No text annotation
Not in a motif group
HL_4V7K_1401/BA/1171:1178No text annotation
Not in a motif group
HL_4V7K_1411/BA/1222:1227No text annotation
Not in a motif group
homologous
HL_7RQB_032
HL_43074.18
HL_4V7K_1421/BA/1281:1289No text annotation
Not in a motif group
homologous
HL_7RQB_033
HL_33239.17
HL_4V7K_1431/BA/1324:1330No text annotation
Not in a motif group
homologous
HL_7RQB_034
HL_86880.5
HL_4V7K_1441/BA/1363:1368Other HL
Not in a motif group
homologous
HL_5J7L_167
HL_43074.18
HL_4V7K_1451/BA/1389:1398No text annotation
Not in a motif group
homologous
HL_7RQB_036
HL_78457.4
HL_4V7K_1461/BA/1450A:1461No text annotation
Not in a motif group
HL_4V7K_1471/BA/1492:1498No text annotation
Not in a motif group
HL_4V7K_1491/BA/1565:1568No text annotation
Not in a motif group
homologous
HL_7A0S_039
HL_69353.7
HL_4V7K_1501/BA/1612:1619No text annotation
Not in a motif group
homologous
HL_7RQB_040
HL_66171.3
HL_4V7K_1511/BA/1631:1635No text annotation
Not in a motif group
homologous
HL_7RQB_041
HL_86880.5
HL_4V7K_1521/BA/1691:1696No text annotation
Not in a motif group
homologous
HL_7RQB_042
HL_79299.11
HL_4V7K_1531/BA/1718:1744No text annotation
Not in a motif group
HL_4V7K_1541/BA/1752:1756No text annotation
Not in a motif group
homologous
HL_7RQB_044
HL_79272.3
HL_4V7K_1551/BA/1777:1787No text annotation
Not in a motif group
homologous
HL_4WF9_043
HL_43613.4
HL_4V7K_1561/BA/1806:1811No text annotation
Not in a motif group
homologous
HL_7RQB_046
HL_43074.18
HL_4V7K_1571/BA/1863:1879No text annotation
Not in a motif group
geometric
HL_7A0S_056
HL_93727.5
HL_4V7K_1581/BA/1910:1920No text annotation
Not in a motif group
geometric
HL_5TBW_049
HL_98248.1
HL_4V7K_1591/BA/1949:1957No text annotation
Not in a motif group
homologous
HL_7RQB_049
HL_53760.4
HL_4V7K_1601/BA/2027:2036No text annotation
Not in a motif group
homologous
HL_7RQB_050
HL_90642.5
HL_4V7K_1611/BA/2143:2148No text annotation
Not in a motif group
homologous
HL_7RQB_051
NA
HL_4V7K_1621/BA/2205:2219No text annotation
Not in a motif group
geometric
HL_6U8D_003
HL_18722.3
HL_4V7K_1631/BA/2248:2256No text annotation
Not in a motif group
homologous
HL_7RQB_053
NA
HL_4V7K_1641/BA/2264:2276No text annotation
Not in a motif group
homologous
HL_7RQB_054
HL_19870.5
HL_4V7K_1651/BA/2303:2313No text annotation
Not in a motif group
homologous
HL_4WF9_051
NA
HL_4V7K_1661/BA/2324:2331No text annotation
Not in a motif group
homologous
HL_7RQB_056
HL_46142.8
HL_4V7K_1671/BA/2355:2362No text annotation
Not in a motif group
homologous
HL_7RQB_057
HL_93727.5
HL_4V7K_1681/BA/2374:2379GNRA
Not in a motif group
homologous
HL_5J7L_191
HL_43074.18
HL_4V7K_1691/BA/2404:2413No text annotation
Not in a motif group
homologous
HL_7RQB_059
HL_48376.4
HL_4V7K_1701/BA/2471:2479No text annotation
Not in a motif group
homologous
HL_7RQB_060
HL_36421.5
HL_4V7K_1711/BA/2528:2535No text annotation
Not in a motif group
homologous
HL_7RQB_061
HL_92681.5
HL_4V7K_1721/BA/2551:2557No text annotation
Not in a motif group
homologous
HL_4WF9_058
HL_26055.6
HL_4V7K_1731/BA/2594:2599No text annotation
Not in a motif group
homologous
HL_7RQB_063
HL_43074.18
HL_4V7K_1741/BA/2658:2663GNRA
Not in a motif group
geometric
HL_5B2P_001
HL_43074.18
HL_4V7K_1751/BA/2701:2706No text annotation
Not in a motif group
homologous
HL_7RQB_065
HL_31583.1
HL_4V7K_1761/BA/2745:2759No text annotation
Not in a motif group
homologous
HL_7RQB_066
HL_56677.5
HL_4V7K_1771/BA/2792:2804No text annotation
Not in a motif group
HL_4V7K_1781/BA/2819:2827No text annotation
Not in a motif group
homologous
HL_7RQB_068
HL_05018.6
HL_4V7K_1791/BA/2856:2861No text annotation
Not in a motif group
homologous
HL_7RQB_069
HL_43074.18
HL_4V7K_1801/BB/38:44No text annotation
Not in a motif group
geometric
HL_7RQB_070
HL_02733.5
HL_4V7K_1811/BB/86:91No text annotation
Not in a motif group
homologous
HL_7A0S_070
HL_43074.18
HL_4V7K_1821/Ba/12:22No text annotation
Not in a motif group
homologous
HL_5J7L_001
HL_67265.4
HL_4V7K_1831/Ba/77:92No text annotation
Not in a motif group
HL_4V7K_1841/Ba/158:163GNRA
Not in a motif group
homologous
HL_4LFB_003
HL_43074.18
HL_4V7K_1851/Ba/189C:189HNo text annotation
Not in a motif group
homologous
HL_6CZR_075
HL_44730.2
HL_4V7K_1861/Ba/200:217No text annotation
Not in a motif group
homologous
HL_6CZR_076
HL_37407.2
HL_4V7K_1871/Ba/259:267No text annotation
Not in a motif group
homologous
HL_4LFB_006
HL_93727.5
HL_4V7K_1881/Ba/296:301GNRA
Not in a motif group
homologous
HL_5J7L_007
HL_43074.18
HL_4V7K_1891/Ba/320:333No text annotation
Not in a motif group
homologous
HL_4LFB_008
HL_81205.2
HL_4V7K_1901/Ba/342:347UNCG
Not in a motif group
homologous
HL_4LFB_009
HL_79299.11
HL_4V7K_1911/Ba/379:384GNRA
Not in a motif group
homologous
HL_4LFB_010
HL_43074.18
HL_4V7K_1921/Ba/419:424UNCG
Not in a motif group
homologous
HL_5J7L_011
HL_79299.11
HL_4V7K_1931/Ba/458:473No text annotation
Not in a motif group
homologous
HL_4LFB_012
HL_68304.6
HL_4V7K_1941/Ba/522:527No text annotation
Not in a motif group
geometric
HL_5J7L_143
HL_98557.5
HL_4V7K_1951/Ba/617:623No text annotation
Not in a motif group
homologous
HL_4LFB_014
HL_26055.6
HL_4V7K_1961/Ba/689:698No text annotation
Not in a motif group
homologous
HL_4LFB_015
HL_87219.4
HL_4V7K_1971/Ba/726:731Other HL
Not in a motif group
homologous
HL_4LFB_016
HL_43074.18
HL_4V7K_1981/Ba/786:796No text annotation
Not in a motif group
homologous
HL_4LFB_017
HL_87219.4
HL_4V7K_1991/Ba/838:848No text annotation
Not in a motif group
homologous
HL_4LFB_018
HL_18722.3
HL_4V7K_2001/Ba/862:867GNRA
Not in a motif group
homologous
HL_4LFB_019
HL_43074.18
HL_4V7K_2011/Ba/897:902GNRA
Not in a motif group
homologous
HL_4LFB_020
HL_43074.18
HL_4V7K_2021/Ba/963:972No text annotation
Not in a motif group
homologous
HL_4LFB_021
NA
HL_4V7K_2031/Ba/1012:1017GNRA
Not in a motif group
geometric
HL_4LFB_022
HL_43074.18
HL_4V7K_2041/Ba/1076:1081GNRA
Not in a motif group
homologous
HL_4LFB_024
HL_43074.18
HL_4V7K_2051/Ba/1089:1096No text annotation
Not in a motif group
homologous
HL_4LFB_025
HL_54035.7
HL_4V7K_2061/Ba/1128:1143No text annotation
Not in a motif group
HL_4V7K_2071/Ba/1165:1171No text annotation
Not in a motif group
HL_4V7K_2081/Ba/1265:1270Other HL
Not in a motif group
homologous
HL_4LFB_028
HL_43074.18
HL_4V7K_2091/Ba/1314:1323No text annotation
Not in a motif group
homologous
HL_4LFB_029
HL_78061.2
HL_4V7K_2101/Ba/1356:1366No text annotation
Not in a motif group
homologous
HL_4LFB_030
HL_70505.1
HL_4V7K_2111/Ba/1445:1457UNCG
Not in a motif group
homologous
HL_5J7L_030
HL_79299.11
HL_4V7K_2121/Ba/1515:1520No text annotation
Not in a motif group
homologous
HL_4LFB_032
NA
HL_4V7K_2131/Bv/13:22No text annotation
Not in a motif group
homologous
HL_5E81_211
NA
HL_4V7K_2141/Bv/31:39No text annotation
Not in a motif group
homologous
HL_5E81_212
NA
HL_4V7K_2151/Bv/53:61T-loop with 2 stacked bulged bases
Not in a motif group
homologous
HL_4V9Q_215
HL_33239.17
HL_4V7K_2161/Bw/12:23No text annotation
Not in a motif group
homologous
HL_1F7U_001
NA
HL_4V7K_2171/Bw/29:41No text annotation
Not in a motif group
homologous
HL_6GSL_221
HL_17086.2
HL_4V7K_2181/Bw/53:61T-loop with 2 stacked bulged bases
Not in a motif group
homologous
HL_1QTQ_003
HL_33239.17

Problematic loops

#loop idProblemSequence
HL_4V7K_022No text annotation
HL_4V7K_068No text annotation
HL_4V7K_114No text annotation
HL_4V7K_126No text annotation
HL_4V7K_131No text annotation
HL_4V7K_148No text annotation

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
IL_4V7K_0011/AA/24:30,
1/AA/510:516
Triple sheared with non-canonical cWW
Not in a motif group
homologous
IL_7RQB_001
IL_66414.5
IL_4V7K_0021/AA/36:37,
1/AA/442:444
Single bulged A
Not in a motif group
homologous
IL_7RQB_002
IL_80007.16
IL_4V7K_0031/AA/42:43,
1/AA/434:436
Minor groove platform
Not in a motif group
homologous
IL_7RQB_003
IL_06437.11
IL_4V7K_0041/AA/81:85,
1/AA/97:105
Kink-turn
Not in a motif group
homologous
IL_7RQB_004
IL_29549.9
IL_4V7K_0051/AA/183:184,
1/AA/212:214
Single stack bend
Not in a motif group
homologous
IL_7RQB_005
IL_04038.4
IL_4V7K_0061/AA/188:194,
1/AA/201:208
8x7 Sarcin-Ricin; G-bulge
Not in a motif group
geometric
IL_7RQB_006
IL_04346.5
IL_4V7K_0071/AA/239:245,
1/AA/253:258
7x6 Sarcin-Ricin; G-bulge
Not in a motif group
homologous
IL_7RQB_007
IL_35110.5
IL_4V7K_0081/AA/271I:271J,
1/AA/271M:271O
Single bulged U
Not in a motif group
geometric
IL_5TBW_125
IL_83039.11
IL_4V7K_0091/AA/272D:272F,
1/AA/363D:364
No text annotation
Not in a motif group
geometric
IL_4V9F_072
IL_23663.4
IL_4V7K_0101/AA/272J:279,
1/AA/361:363
No text annotation
Not in a motif group
IL_4V7K_0111/AA/280:284,
1/AA/357:360
tSH-tHW
Not in a motif group
homologous
IL_7RQB_011
IL_08757.3
IL_4V7K_0121/AA/288:290,
1/AA/350:353
Isolated tHS basepair with bulges
Not in a motif group
homologous
IL_7RQB_012
IL_38958.6
IL_4V7K_0131/AA/293:295,
1/AA/343:347
No text annotation
Not in a motif group
homologous
IL_7RQB_013
IL_69440.1
IL_4V7K_0141/AA/378:380,
1/AA/394:396
No text annotation
Not in a motif group
geometric
IL_7RQB_083
IL_01312.13
IL_4V7K_0151/AA/481:484,
1/AA/496:509
No text annotation
Not in a motif group
homologous
IL_7RQB_014
IL_60992.5
IL_4V7K_0161/AA/564:566,
1/AA/575:577
No text annotation
Not in a motif group
geometric
IL_4WF9_017
IL_01312.13
IL_4V7K_0171/AA/606:610,
1/AA/618:622
AAA cross-strand stack
Not in a motif group
homologous
IL_4WF9_019
IL_56467.6
IL_4V7K_0181/AA/672:674,
1/AA/806:808
No text annotation
Not in a motif group
homologous
IL_7RQB_017
IL_01312.13
IL_4V7K_0191/AA/674:678,
1/AA/799:806
tHW-tHW cross-strand stack
Not in a motif group
geometric
IL_4WF9_021
IL_17470.5
IL_4V7K_0201/AA/697:698,
1/AA/763:765
Single bulged A
Not in a motif group
geometric
IL_7RQB_019
IL_80007.16
IL_4V7K_0211/AA/702:703,
1/AA/728:730
Single bulged G
Not in a motif group
homologous
IL_7RQB_020
IL_59137.10
IL_4V7K_0221/AA/703:707,
1/AA/724:728
Triple sheared
Not in a motif group
geometric
IL_7RQB_021
IL_56467.6
IL_4V7K_0231/AA/738:741,
1/AA/756:758
Major groove platform with extra cWW
Not in a motif group
homologous
IL_7RQB_022
IL_95485.6
IL_4V7K_0241/AA/775:777,
1/AA/787:791
Multiple bulged bases
Not in a motif group
geometric
IL_5J7L_265
IL_90991.5
IL_4V7K_0251/AA/837:838,
1/AA/940:942
Single stack bend
Not in a motif group
homologous
IL_4WF9_028
IL_04038.4
IL_4V7K_0261/AA/844:846,
1/AA/931:934
Intercalated cWW
Not in a motif group
geometric
IL_7RQB_025
IL_01312.13
IL_4V7K_0271/AA/846:850,
1/AA/927:931
No text annotation
Not in a motif group
homologous
IL_7RQB_026
IL_94165.1
IL_4V7K_0281/AA/858:862,
1/AA/915:919
5x5 Sarcin-Ricin with intercalated A; G-bulge
Not in a motif group
homologous
IL_7RQB_027
IL_83354.1
IL_4V7K_0291/AA/862:863,
1/AA/913:915
Minor groove platform
Not in a motif group
geometric
IL_4V9F_034
IL_06437.11
IL_4V7K_0301/AA/864:868,
1/AA/909:912
C-loop
Not in a motif group
homologous
IL_7RQB_029
IL_63596.4
IL_4V7K_0311/AA/870:872,
1/AA/905:907
Isolated cWS basepair
Not in a motif group
homologous
IL_7RQB_030
IL_67621.5
IL_4V7K_0321/AA/875:879,
1/AA/898:902
Triple sheared
Not in a motif group
homologous
IL_5J7L_274
IL_56467.6
IL_4V7K_0331/AA/880:881,
1/AA/895:897
Single bulged A
Not in a motif group
geometric
IL_5WWT_001
IL_80007.16
IL_4V7K_0341/AA/881:884,
1/AA/892:895
No text annotation
Not in a motif group
IL_4V7K_0351/AA/952:954,
1/AA/963:965
No text annotation
Not in a motif group
homologous
IL_7RQB_034
IL_01312.13
IL_4V7K_0361/AA/994:996,
1/AA/1159:1160
Single bulged C
Not in a motif group
homologous
IL_7RQB_035
IL_61258.10
IL_4V7K_0371/AA/998:1002,
1/AA/1153:1157
UAA/GAN
Not in a motif group
homologous
IL_7RQB_036
IL_53523.5
IL_4V7K_0381/AA/1004:1011,
1/AA/1150:1151
SSU/LSU pseudoknot
Not in a motif group
homologous
IL_7RQB_037
IL_15861.6
IL_4V7K_0391/AA/1011:1013,
1/AA/1149:1150
Single bulged U
Not in a motif group
geometric
IL_7RQB_038
IL_83039.11
IL_4V7K_0401/AA/1018:1024,
1/AA/1140:1144
No text annotation
Not in a motif group
geometric
IL_4WF9_039
IL_57188.3
IL_4V7K_0411/AA/1024:1030,
1/AA/1124:1140
No text annotation
Not in a motif group
homologous
IL_7RQB_040
IL_55786.1
IL_4V7K_0421/AA/1031:1034,
1/AA/1121:1123
Isolated non-canonical cWW with bulges
Not in a motif group
homologous
IL_7RQB_041
IL_55456.1
IL_4V7K_0431/AA/1196:1198,
1/AA/1247:1250
Isolated cWS basepair
Not in a motif group
homologous
IL_7RQB_045
IL_67621.5
IL_4V7K_0441/AA/1202:1206,
1/AA/1240:1243
No text annotation
Not in a motif group
homologous
IL_7RQB_046
IL_68574.2
IL_4V7K_0451/AA/1208:1215,
1/AA/1234:1238
Kink-turn
Not in a motif group
homologous
IL_7RQB_047
IL_29549.9
IL_4V7K_0461/AA/1219:1221,
1/AA/1229:1230
Single bulged A
Not in a motif group
homologous
IL_7RQB_048
IL_80007.16
IL_4V7K_0471/AA/1262:1269,
1/AA/2011:2017
8x7 Sarcin-Ricin; G-bulge
Not in a motif group
homologous
IL_7RQB_049
IL_04346.5
IL_4V7K_0481/AA/1310:1313,
1/AA/1603:1604
Major groove platform; stack outside cWW
Not in a motif group
homologous
IL_7RQB_050
IL_70995.6
IL_4V7K_0491/AA/1319:1323,
1/AA/1331:1333
C-loop
Not in a motif group
homologous
IL_7RQB_051
IL_63596.4
IL_4V7K_0501/AA/1351:1355,
1/AA/1376:1380
UAA/GAN
Not in a motif group
homologous
IL_7RQB_052
IL_53523.5
IL_4V7K_0511/AA/1357:1361,
1/AA/1370:1374
tSH-tHW-tHS
Not in a motif group
homologous
IL_7RQB_053
IL_39521.5
IL_4V7K_0521/AA/1415:1416,
1/AA/1582:1587
No text annotation
Not in a motif group
homologous
IL_7RQB_054
IL_67474.3
IL_4V7K_0531/AA/1417:1421,
1/AA/1577:1581
UAA/GAN
Not in a motif group
homologous
IL_5J7L_295
IL_53523.5
IL_4V7K_0541/AA/1433:1435,
1/AA/1557:1560
Isolated tWW turn
Not in a motif group
homologous
IL_7RQB_056
IL_54997.5
IL_4V7K_0551/AA/1437:1440,
1/AA/1551:1555
tSH-tHW
Not in a motif group
homologous
IL_7RQB_057
IL_08757.3
IL_4V7K_0561/AA/1448:1450,
1/AA/1462:1463
Single stack bend
Not in a motif group
homologous
IL_7RQB_058
IL_31836.1
IL_4V7K_0571/AA/1469:1473,
1/AA/1518:1523
UAA/GAN
Not in a motif group
homologous
IL_7RQB_060
IL_53523.5
IL_4V7K_0581/AA/1481:1482,
1/AA/1506:1510
No text annotation
Not in a motif group
homologous
IL_7RQB_061
IL_46464.1
IL_4V7K_0601/AA/1488:1491,
1/AA/1499:1501
Isolated non-canonical cWW with bulges
Not in a motif group
geometric
IL_5ML7_010
IL_01312.13
IL_4V7K_0611/AA/1526:1529,
1/AA/1540:1546
No text annotation
Not in a motif group
homologous
IL_7RQB_063
IL_89836.1
IL_4V7K_0621/AA/1651:1656,
1/AA/2004:2006
No text annotation
Not in a motif group
homologous
IL_7RQB_064
IL_12566.2
IL_4V7K_0631/AA/1663:1665,
1/AA/1995:1997
Isolated tWW turn
Not in a motif group
homologous
IL_7RQB_065
IL_54997.5
IL_4V7K_0641/AA/1666:1669,
1/AA/1993:1994
Major groove platform; stack outside cWW
Not in a motif group
geometric
IL_5J7L_306
IL_80663.10
IL_4V7K_0651/AA/1669:1674,
1/AA/1990:1993
Intercalated tWH
Not in a motif group
homologous
IL_7RQB_067
IL_01312.13
IL_4V7K_0661/AA/1686:1691,
1/AA/1696:1702
tSH-tSH-tHH-tHS
Not in a motif group
homologous
IL_7RQB_068
IL_66584.5
IL_4V7K_0671/AA/1770:1771,
1/AA/1980:1982
Single bulged A
Not in a motif group
homologous
IL_7RQB_069
IL_80007.16
IL_4V7K_0681/AA/1798:1804,
1/AA/1813:1821
Kink-turn related
Not in a motif group
homologous
IL_7RQB_070
IL_17069.3
IL_4V7K_0691/AA/1837:1840,
1/AA/1902:1903
Major groove outside cWW, minor groove, intercalation pocket
Not in a motif group
homologous
IL_7RQB_071
IL_31836.1
IL_4V7K_0701/AA/1841:1842,
1/AA/1898:1901
Major groove outside cWW, minor groove, intercalation pocket
Not in a motif group
homologous
IL_5J7L_315
IL_13730.12
IL_4V7K_0711/AA/1846:1849,
1/AA/1893:1894
Minor groove platform
Not in a motif group
homologous
IL_7RQB_073
IL_06437.11
IL_4V7K_0721/AA/1851:1855,
1/AA/1887:1891
UAA/GAN with extra pair
Not in a motif group
homologous
IL_7RQB_074
IL_34907.2
IL_4V7K_0731/AA/1856:1860,
1/AA/1882:1886
Triple sheared
Not in a motif group
homologous
IL_7RQB_075
IL_56467.6
IL_4V7K_0741/AA/1933:1934,
1/AA/1964:1967
Multiple bulged bases
Not in a motif group
homologous
IL_7RQB_076
IL_69632.1
IL_4V7K_0751/AA/1934:1945,
1/AA/1961:1964
No text annotation
Not in a motif group
geometric
IL_4WF9_077
IL_70285.1
IL_4V7K_0761/AA/2050:2052,
1/AA/2617:2618
Major groove platform
Not in a motif group
homologous
IL_7RQB_078
IL_80663.10
IL_4V7K_0771/AA/2067:2069,
1/AA/2442:2443
Single bulged U
Not in a motif group
homologous
IL_7A0S_075
IL_83039.11
IL_4V7K_0781/AA/2070:2071,
1/AA/2438:2441
Minor groove platform
Not in a motif group
homologous
IL_7RQB_081
IL_06437.11
IL_4V7K_0791/AA/2081:2083,
1/AA/2236:2239
Isolated tHS basepair with bulges
Not in a motif group
homologous
IL_7RQB_082
IL_38958.6
IL_4V7K_0801/AA/2085:2087,
1/AA/2232:2234
No text annotation
Not in a motif group
homologous
IL_7RQB_083
IL_01312.13
IL_4V7K_0821/AA/2108:2122,
1/AA/2176:2181
No text annotation
Not in a motif group
IL_4V7K_0831/AA/2124:2129,
1/AA/2159:2174
No text annotation
Not in a motif group
IL_4V7K_0841/AA/2129:2136,
1/AA/2155:2159
Kink-turn
Not in a motif group
geometric
IL_5J7L_330
IL_16456.1
IL_4V7K_0851/AA/2140:2142,
1/AA/2149:2151
No text annotation
Not in a motif group
geometric
IL_3ICQ_003
IL_01312.13
IL_4V7K_0861/AA/2297:2299,
1/AA/2317:2321
Isolated tHS basepair with bulges
Not in a motif group
geometric
IL_7RQB_088
IL_38958.6
IL_4V7K_0871/AA/2350:2353,
1/AA/2364:2367
Double sheared
Not in a motif group
homologous
IL_7RQB_089
IL_09705.7
IL_4V7K_0881/AA/2401:2403,
1/AA/2414:2415
Single bulged U
Not in a motif group
homologous
IL_5J7L_334
IL_21340.1
IL_4V7K_0891/AA/2453:2454,
1/AA/2498:2500
Single stack bend
Not in a motif group
homologous
IL_7RQB_091
IL_04038.4
IL_4V7K_0901/AA/2454:2455,
1/AA/2496:2498
Major groove platform
Not in a motif group
geometric
IL_7RQB_092
IL_80663.10
IL_4V7K_0911/AA/2457:2459,
1/AA/2493:2494
Major groove platform
Not in a motif group
homologous
IL_4WF9_091
IL_80663.10
IL_4V7K_0921/AA/2459:2461,
1/AA/2489:2493
Major groove minor groove platform with extra cWW
Not in a motif group
geometric
IL_7A0S_086
IL_96042.4
IL_4V7K_0931/AA/2466:2470,
1/AA/2480:2484
Triple sheared
Not in a motif group
homologous
IL_7RQB_095
IL_56467.6
IL_4V7K_0941/AA/2507:2508,
1/AA/2580:2582
Major groove platform
Not in a motif group
homologous
IL_7RQB_096
IL_02060.4
IL_4V7K_0951/AA/2510:2512,
1/AA/2574:2578
Isolated non-canonical cWW with bulges
Not in a motif group
homologous
IL_7RQB_097
IL_01312.13
IL_4V7K_0961/AA/2512:2513,
1/AA/2571:2574
Multiple bulged bases
Not in a motif group
geometric
IL_7RQB_098
IL_13730.12
IL_4V7K_0971/AA/2522:2523,
1/AA/2540:2543
Minor groove platform with intercalation
Not in a motif group
homologous
IL_7RQB_099
IL_95601.1
IL_4V7K_0991/AA/2591:2592,
1/AA/2601:2603
Single bulged A
Not in a motif group
homologous
IL_7RQB_101
IL_80007.16
IL_4V7K_1001/AA/2636:2640,
1/AA/2774:2782
tSH-tHS-tHW
Not in a motif group
homologous
IL_7RQB_102
IL_34907.2
IL_4V7K_1011/AA/2652:2658,
1/AA/2663:2668
Sarcin-Ricin target in LSU H95; G-bulge
Not in a motif group
geometric
IL_7RQB_103
IL_35110.5
IL_4V7K_1021/AA/2680:2684,
1/AA/2725:2727
C-loop
Not in a motif group
homologous
IL_7RQB_104
IL_63596.4
IL_4V7K_1041/AA/2687:2691,
1/AA/2718:2722
No text annotation
Not in a motif group
homologous
IL_7RQB_105
IL_08296.3
IL_4V7K_1051/AA/2695:2696,
1/AA/2711:2714