4V8C Internal, Hairpin and 3-way Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_4V8C_001 | 1/AA/59:68 | No text annotation Not in a motif group | homologous HL_7RQB_001 HL_99167.1 | |
| HL_4V8C_002 | 1/AA/87:95 | No text annotation Not in a motif group | homologous HL_7RQB_002 HL_96598.1 | |
| HL_4V8C_003 | 1/AA/123:128 | No text annotation Not in a motif group | homologous HL_7RQB_003 HL_75407.1 | |
| HL_4V8C_004 | 1/AA/137A:141A | No text annotation Not in a motif group | homologous HL_7RQB_004 HL_79921.3 | |
| HL_4V8C_005 | 1/AA/155:171 | No text annotation Not in a motif group | ||
| HL_4V8C_006 | 1/AA/194:201 | No text annotation Not in a motif group | geometric HL_7RQB_006 HL_06192.2 | |
| HL_4V8C_007 | 1/AA/225:230 | No text annotation Not in a motif group | homologous HL_7RQB_007 HL_02862.2 | |
| HL_4V8C_008 | 1/AA/246:252 | No text annotation Not in a motif group | homologous HL_7RQB_008 HL_67216.7 | |
| HL_4V8C_009 | 1/AA/270K:270N | No text annotation Not in a motif group | ||
| HL_4V8C_010 | 1/AA/305:312 | No text annotation Not in a motif group | homologous HL_7RQB_010 HL_89380.2 | |
| HL_4V8C_011 | 1/AA/319:323 | No text annotation Not in a motif group | homologous HL_7RQB_011 HL_75407.1 | |
| HL_4V8C_012 | 1/AA/327:335 | No text annotation Not in a motif group | homologous HL_7RQB_012 HL_08002.9 | |
| HL_4V8C_013 | 1/AA/382:392 | No text annotation Not in a motif group | homologous HL_7RQB_013 HL_91503.4 | |
| HL_4V8C_014 | 1/AA/410:417 | No text annotation Not in a motif group | homologous HL_7RQB_014 HL_96598.1 | |
| HL_4V8C_015 | 1/AA/462:467 | GNRA Not in a motif group | homologous HL_5J7L_147 HL_42097.2 | |
| HL_4V8C_016 | 1/AA/487:493 | No text annotation Not in a motif group | homologous HL_7RQB_016 HL_42097.2 | |
| HL_4V8C_017 | 1/AA/544:549 | GNRA Not in a motif group | geometric HL_4V88_218 HL_42097.2 | |
| HL_4V8C_018 | 1/AA/566:575 | No text annotation Not in a motif group | homologous HL_7RQB_018 HL_89380.2 | |
| HL_4V8C_019 | 1/AA/611:617 | No text annotation Not in a motif group | homologous HL_7A0S_019 HL_32369.1 | |
| HL_4V8C_020 | 1/AA/629:634 | No text annotation Not in a motif group | homologous HL_7RQB_020 HL_42097.2 | |
| HL_4V8C_021 | 1/AA/641:647 | No text annotation Not in a motif group | homologous HL_7RQB_021 HL_42097.2 | |
| HL_4V8C_023 | 1/AA/712:719 | No text annotation Not in a motif group | homologous HL_7RQB_022 HL_84085.2 | |
| HL_4V8C_024 | 1/AA/744:753 | No text annotation Not in a motif group | homologous HL_7RQB_023 HL_39334.6 | |
| HL_4V8C_025 | 1/AA/779:785 | No text annotation Not in a motif group | homologous HL_7A0S_023 HL_27930.1 | |
| HL_4V8C_026 | 1/AA/826:831 | No text annotation Not in a motif group | homologous HL_4WF9_025 HL_64365.1 | |
| HL_4V8C_027 | 1/AA/883:893 | No text annotation Not in a motif group | ||
| HL_4V8C_028 | 1/AA/955:962 | No text annotation Not in a motif group | homologous HL_7RQB_027 HL_42097.2 | |
| HL_4V8C_029 | 1/AA/978:985 | No text annotation Not in a motif group | homologous HL_7RQB_028 HL_64430.2 | |
| HL_4V8C_030 | 1/AA/1064:1074 | No text annotation Not in a motif group | homologous HL_6PRV_001 HL_07145.1 | |
| HL_4V8C_031 | 1/AA/1092:1099 | No text annotation Not in a motif group | geometric HL_5J7L_151 HL_90617.2 | |
| HL_4V8C_032 | 1/AA/1171:1178 | No text annotation Not in a motif group | geometric HL_6U8D_003 HL_89098.1 | |
| HL_4V8C_033 | 1/AA/1223:1228 | No text annotation Not in a motif group | homologous HL_7RQB_032 HL_42097.2 | |
| HL_4V8C_034 | 1/AA/1281:1289 | No text annotation Not in a motif group | homologous HL_7RQB_033 HL_89380.2 | |
| HL_4V8C_035 | 1/AA/1324:1330 | No text annotation Not in a motif group | homologous HL_7RQB_034 HL_46680.1 | |
| HL_4V8C_036 | 1/AA/1363:1368 | No text annotation Not in a motif group | homologous HL_7RQB_035 HL_87030.2 | |
| HL_4V8C_037 | 1/AA/1389:1398 | No text annotation Not in a motif group | homologous HL_7RQB_036 HL_69023.2 | |
| HL_4V8C_038 | 1/AA/1451:1459 | No text annotation Not in a motif group | homologous HL_7RQB_037 HL_32426.1 | |
| HL_4V8C_039 | 1/AA/1492:1498 | No text annotation Not in a motif group | homologous HL_7RQB_038 HL_46680.1 | |
| HL_4V8C_040 | 1/AA/1533:1538 | No text annotation Not in a motif group | ||
| HL_4V8C_041 | 1/AA/1565:1568 | No text annotation Not in a motif group | homologous HL_7RQB_039 HL_38927.2 | |
| HL_4V8C_042 | 1/AA/1612:1619 | No text annotation Not in a motif group | homologous HL_7RQB_040 HL_64430.2 | |
| HL_4V8C_043 | 1/AA/1630A:1635 | No text annotation Not in a motif group | homologous HL_7RQB_041 HL_01057.1 | |
| HL_4V8C_044 | 1/AA/1691:1696 | UNCG Not in a motif group | homologous HL_5J7L_175 HL_03562.2 | |
| HL_4V8C_045 | 1/AA/1727:1733 | No text annotation Not in a motif group | homologous HL_7RQB_043 HL_43656.2 | |
| HL_4V8C_046 | 1/AA/1752:1756 | No text annotation Not in a motif group | homologous HL_7RQB_044 HL_76539.2 | |
| HL_4V8C_047 | 1/AA/1777:1787 | No text annotation Not in a motif group | homologous HL_5J7L_178 HL_43613.5 | |
| HL_4V8C_048 | 1/AA/1806:1811 | No text annotation Not in a motif group | homologous HL_7RQB_046 HL_42097.2 | |
| HL_4V8C_049 | 1/AA/1864:1878 | No text annotation Not in a motif group | homologous HL_7RQB_047 HL_42097.2 | |
| HL_4V8C_050 | 1/AA/1910:1920 | No text annotation Not in a motif group | geometric HL_5TBW_049 HL_71924.2 | |
| HL_4V8C_051 | 1/AA/1949:1957 | No text annotation Not in a motif group | homologous HL_7RQB_049 HL_51824.1 | |
| HL_4V8C_052 | 1/AA/2027:2036 | No text annotation Not in a motif group | homologous HL_7RQB_050 HL_90642.6 | |
| HL_4V8C_053 | 1/AA/2143:2148 | No text annotation Not in a motif group | homologous HL_7RQB_051 NA | |
| HL_4V8C_054 | 1/AA/2209:2215 | No text annotation Not in a motif group | geometric HL_5TBW_004 HL_98426.1 | |
| HL_4V8C_055 | 1/AA/2248:2256 | No text annotation Not in a motif group | homologous HL_7RQB_053 NA | |
| HL_4V8C_056 | 1/AA/2264:2276 | No text annotation Not in a motif group | homologous HL_7RQB_054 HL_19870.6 | |
| HL_4V8C_057 | 1/AA/2303:2313 | No text annotation Not in a motif group | homologous HL_7RQB_055 HL_11805.3 | |
| HL_4V8C_058 | 1/AA/2324:2331 | No text annotation Not in a motif group | homologous HL_7RQB_056 HL_12078.2 | |
| HL_4V8C_059 | 1/AA/2355:2362 | No text annotation Not in a motif group | homologous HL_7RQB_057 HL_09136.1 | |
| HL_4V8C_060 | 1/AA/2374:2379 | No text annotation Not in a motif group | homologous HL_7RQB_058 HL_42097.2 | |
| HL_4V8C_061 | 1/AA/2404:2413 | No text annotation Not in a motif group | homologous HL_7RQB_059 HL_30784.2 | |
| HL_4V8C_062 | 1/AA/2471:2479 | No text annotation Not in a motif group | homologous HL_4WF9_056 HL_06192.2 | |
| HL_4V8C_063 | 1/AA/2528:2535 | No text annotation Not in a motif group | homologous HL_7RQB_061 HL_91104.1 | |
| HL_4V8C_064 | 1/AA/2551:2557 | No text annotation Not in a motif group | homologous HL_4WF9_058 HL_43656.2 | |
| HL_4V8C_065 | 1/AA/2594:2599 | No text annotation Not in a motif group | homologous HL_7RQB_063 HL_42097.2 | |
| HL_4V8C_066 | 1/AA/2658:2663 | No text annotation Not in a motif group | homologous HL_7RQB_064 HL_42097.2 | |
| HL_4V8C_067 | 1/AA/2701:2706 | No text annotation Not in a motif group | homologous HL_7RQB_065 HL_53171.2 | |
| HL_4V8C_068 | 1/AA/2745:2759 | No text annotation Not in a motif group | homologous HL_7RQB_066 HL_56677.7 | |
| HL_4V8C_069 | 1/AA/2794:2802 | Other HL Not in a motif group | geometric HL_1P6V_001 HL_03562.2 | |
| HL_4V8C_070 | 1/AA/2819:2827 | No text annotation Not in a motif group | homologous HL_7RQB_068 HL_27930.1 | |
| HL_4V8C_071 | 1/AA/2856:2861 | No text annotation Not in a motif group | homologous HL_7RQB_069 HL_42097.2 | |
| HL_4V8C_072 | 1/AB/38:44 | No text annotation Not in a motif group | homologous HL_5J7L_203 HL_87939.1 | |
| HL_4V8C_073 | 1/AB/86:90 | GNRA Not in a motif group | homologous HL_4V9F_072 HL_42097.2 | |
| HL_4V8C_074 | 1/BA/59:68 | No text annotation Not in a motif group | homologous HL_7RQB_001 HL_99167.1 | |
| HL_4V8C_075 | 1/BA/87:95 | No text annotation Not in a motif group | geometric HL_2Y8W_001 HL_01057.1 | |
| HL_4V8C_076 | 1/BA/123:128 | No text annotation Not in a motif group | homologous HL_7RQB_003 HL_75407.1 | |
| HL_4V8C_077 | 1/BA/137A:141A | No text annotation Not in a motif group | homologous HL_7RQB_004 HL_79921.3 | |
| HL_4V8C_079 | 1/BA/194:201 | No text annotation Not in a motif group | geometric HL_7RQB_006 HL_06192.2 | |
| HL_4V8C_080 | 1/BA/225:230 | No text annotation Not in a motif group | homologous HL_7RQB_007 HL_02862.2 | |
| HL_4V8C_081 | 1/BA/246:252 | No text annotation Not in a motif group | homologous HL_7RQB_008 HL_67216.7 | |
| HL_4V8C_082 | 1/BA/270K:270N | No text annotation Not in a motif group | ||
| HL_4V8C_083 | 1/BA/305:312 | No text annotation Not in a motif group | homologous HL_7RQB_010 HL_89380.2 | |
| HL_4V8C_084 | 1/BA/319:323 | No text annotation Not in a motif group | homologous HL_7RQB_011 HL_75407.1 | |
| HL_4V8C_085 | 1/BA/327:335 | No text annotation Not in a motif group | homologous HL_7RQB_012 HL_08002.9 | |
| HL_4V8C_086 | 1/BA/382:392 | No text annotation Not in a motif group | homologous HL_7RQB_013 HL_91503.4 | |
| HL_4V8C_087 | 1/BA/410:417 | No text annotation Not in a motif group | homologous HL_7RQB_014 HL_96598.1 | |
| HL_4V8C_088 | 1/BA/462:467 | No text annotation Not in a motif group | homologous HL_7RQB_015 HL_42097.2 | |
| HL_4V8C_089 | 1/BA/487:493 | No text annotation Not in a motif group | homologous HL_7A0S_016 HL_42097.2 | |
| HL_4V8C_090 | 1/BA/544:549 | GNRA Not in a motif group | geometric HL_6UFG_004 HL_42097.2 | |
| HL_4V8C_091 | 1/BA/566:575 | No text annotation Not in a motif group | geometric HL_7RQB_018 HL_89380.2 | |
| HL_4V8C_092 | 1/BA/611:617 | No text annotation Not in a motif group | homologous HL_7RQB_019 HL_32369.1 | |
| HL_4V8C_093 | 1/BA/629:634 | No text annotation Not in a motif group | homologous HL_7RQB_020 HL_42097.2 | |
| HL_4V8C_094 | 1/BA/641:647 | GNRA with one bulged base Not in a motif group | homologous HL_4WF9_021 HL_42097.2 | |
| HL_4V8C_096 | 1/BA/712:719 | No text annotation Not in a motif group | homologous HL_7RQB_022 HL_84085.2 | |
| HL_4V8C_097 | 1/BA/744:753 | No text annotation Not in a motif group | homologous HL_7RQB_023 HL_39334.6 | |
| HL_4V8C_098 | 1/BA/779:785 | No text annotation Not in a motif group | homologous HL_7A0S_023 HL_27930.1 | |
| HL_4V8C_099 | 1/BA/826:831 | No text annotation Not in a motif group | homologous HL_4WF9_025 HL_64365.1 | |
| HL_4V8C_100 | 1/BA/884:892 | No text annotation Not in a motif group | ||
| HL_4V8C_101 | 1/BA/955:962 | No text annotation Not in a motif group | homologous HL_7RQB_027 HL_42097.2 | |
| HL_4V8C_102 | 1/BA/978:985 | No text annotation Not in a motif group | homologous HL_7RQB_028 HL_64430.2 | |
| HL_4V8C_103 | 1/BA/1064:1074 | No text annotation Not in a motif group | homologous HL_5J7L_161 HL_07145.1 | |
| HL_4V8C_104 | 1/BA/1092:1099 | No text annotation Not in a motif group | ||
| HL_4V8C_105 | 1/BA/1171:1178 | No text annotation Not in a motif group | ||
| HL_4V8C_106 | 1/BA/1223:1228 | No text annotation Not in a motif group | homologous HL_7RQB_032 HL_42097.2 | |
| HL_4V8C_107 | 1/BA/1281:1289 | No text annotation Not in a motif group | homologous HL_7RQB_033 HL_89380.2 | |
| HL_4V8C_108 | 1/BA/1324:1330 | No text annotation Not in a motif group | homologous HL_7RQB_034 HL_46680.1 | |
| HL_4V8C_109 | 1/BA/1363:1368 | Other HL Not in a motif group | homologous HL_5J7L_167 HL_87030.2 | |
| HL_4V8C_110 | 1/BA/1389:1398 | No text annotation Not in a motif group | homologous HL_7RQB_036 HL_69023.2 | |
| HL_4V8C_111 | 1/BA/1451:1459 | No text annotation Not in a motif group | homologous HL_7RQB_037 HL_32426.1 | |
| HL_4V8C_112 | 1/BA/1491:1499 | No text annotation Not in a motif group | geometric HL_2A43_001 HL_26881.1 | |
| HL_4V8C_113 | 1/BA/1533:1538 | No text annotation Not in a motif group | geometric HL_4V88_198 HL_91104.1 | |
| HL_4V8C_114 | 1/BA/1565:1568 | No text annotation Not in a motif group | homologous HL_7A0S_039 HL_38927.2 | |
| HL_4V8C_115 | 1/BA/1612:1619 | No text annotation Not in a motif group | homologous HL_7A0S_040 HL_64430.2 | |
| HL_4V8C_116 | 1/BA/1630A:1635 | No text annotation Not in a motif group | homologous HL_7RQB_041 HL_01057.1 | |
| HL_4V8C_117 | 1/BA/1691:1696 | No text annotation Not in a motif group | homologous HL_7RQB_042 HL_03562.2 | |
| HL_4V8C_118 | 1/BA/1727:1733 | No text annotation Not in a motif group | homologous HL_7RQB_043 HL_43656.2 | |
| HL_4V8C_119 | 1/BA/1752:1756 | No text annotation Not in a motif group | homologous HL_7RQB_044 HL_76539.2 | |
| HL_4V8C_120 | 1/BA/1777:1787 | No text annotation Not in a motif group | homologous HL_7RQB_045 HL_43613.5 | |
| HL_4V8C_121 | 1/BA/1806:1811 | No text annotation Not in a motif group | homologous HL_7RQB_046 HL_42097.2 | |
| HL_4V8C_122 | 1/BA/1864:1878 | No text annotation Not in a motif group | homologous HL_7RQB_047 HL_42097.2 | |
| HL_4V8C_123 | 1/BA/1910:1920 | No text annotation Not in a motif group | geometric HL_5TBW_049 HL_71924.2 | |
| HL_4V8C_124 | 1/BA/1949:1957 | No text annotation Not in a motif group | homologous HL_7RQB_049 HL_51824.1 | |
| HL_4V8C_125 | 1/BA/2027:2036 | No text annotation Not in a motif group | homologous HL_7RQB_050 HL_90642.6 | |
| HL_4V8C_126 | 1/BA/2143:2148 | UNCG Not in a motif group | homologous HL_3U4M_001 HL_03562.2 | |
| HL_4V8C_127 | 1/BA/2209:2215 | No text annotation Not in a motif group | homologous HL_7RQB_052 HL_98426.1 | |
| HL_4V8C_128 | 1/BA/2248:2256 | No text annotation Not in a motif group | homologous HL_7RQB_053 NA | |
| HL_4V8C_129 | 1/BA/2264:2276 | No text annotation Not in a motif group | homologous HL_7RQB_054 HL_19870.6 | |
| HL_4V8C_130 | 1/BA/2303:2313 | No text annotation Not in a motif group | homologous HL_7RQB_055 HL_11805.3 | |
| HL_4V8C_131 | 1/BA/2324:2331 | No text annotation Not in a motif group | homologous HL_7RQB_056 HL_12078.2 | |
| HL_4V8C_132 | 1/BA/2355:2362 | No text annotation Not in a motif group | homologous HL_7RQB_057 HL_09136.1 | |
| HL_4V8C_133 | 1/BA/2374:2379 | No text annotation Not in a motif group | homologous HL_7RQB_058 HL_42097.2 | |
| HL_4V8C_134 | 1/BA/2404:2413 | No text annotation Not in a motif group | homologous HL_7RQB_059 HL_30784.2 | |
| HL_4V8C_135 | 1/BA/2471:2479 | No text annotation Not in a motif group | homologous HL_5J7L_193 HL_06192.2 | |
| HL_4V8C_136 | 1/BA/2528:2535 | No text annotation Not in a motif group | homologous HL_7RQB_061 HL_91104.1 | |
| HL_4V8C_137 | 1/BA/2551:2557 | No text annotation Not in a motif group | homologous HL_4WF9_058 HL_43656.2 | |
| HL_4V8C_138 | 1/BA/2594:2599 | No text annotation Not in a motif group | homologous HL_7RQB_063 HL_42097.2 | |
| HL_4V8C_139 | 1/BA/2658:2663 | GNRA Not in a motif group | homologous HL_5J7L_197 HL_42097.2 | |
| HL_4V8C_140 | 1/BA/2701:2706 | No text annotation Not in a motif group | homologous HL_7RQB_065 HL_53171.2 | |
| HL_4V8C_141 | 1/BA/2745:2759 | No text annotation Not in a motif group | homologous HL_7A0S_065 HL_56677.7 | |
| HL_4V8C_142 | 1/BA/2794:2802 | No text annotation Not in a motif group | geometric HL_5U3G_001 HL_87030.2 | |
| HL_4V8C_143 | 1/BA/2819:2827 | No text annotation Not in a motif group | homologous HL_7RQB_068 HL_27930.1 | |
| HL_4V8C_144 | 1/BA/2856:2861 | No text annotation Not in a motif group | homologous HL_7RQB_069 HL_42097.2 | |
| HL_4V8C_145 | 1/BB/38:44 | No text annotation Not in a motif group | homologous HL_7RQB_070 HL_87939.1 | |
| HL_4V8C_146 | 1/BB/86:90 | Other HL Not in a motif group | geometric HL_2CZJ_007 HL_53845.1 | |
| HL_4V8C_147 | 1/CA/12:22 | No text annotation Not in a motif group | homologous HL_4LFB_001 HL_89881.2 | |
| HL_4V8C_149 | 1/CA/158:163 | GNRA Not in a motif group | homologous HL_4LFB_003 HL_42097.2 | |
| HL_4V8C_150 | 1/CA/186D:191C | No text annotation Not in a motif group | ||
| HL_4V8C_151 | 1/CA/201:216 | No text annotation Not in a motif group | homologous HL_4LFB_005 HL_91104.1 | |
| HL_4V8C_152 | 1/CA/259:267 | No text annotation Not in a motif group | homologous HL_4LFB_006 HL_69023.2 | |
| HL_4V8C_153 | 1/CA/296:301 | GNRA Not in a motif group | homologous HL_4LFB_007 HL_42097.2 | |
| HL_4V8C_154 | 1/CA/320:333 | No text annotation Not in a motif group | homologous HL_5J7L_008 HL_81205.2 | |
| HL_4V8C_155 | 1/CA/342:347 | No text annotation Not in a motif group | homologous HL_6CZR_080 HL_03562.2 | |
| HL_4V8C_156 | 1/CA/379:384 | GNRA Not in a motif group | homologous HL_4LFB_010 HL_42097.2 | |
| HL_4V8C_157 | 1/CA/419:424 | UNCG Not in a motif group | homologous HL_5J7L_011 HL_03562.2 | |
| HL_4V8C_158 | 1/CA/458:474 | No text annotation Not in a motif group | homologous HL_4LFB_012 HL_43656.2 | |
| HL_4V8C_159 | 1/CA/522:527 | No text annotation Not in a motif group | geometric HL_4WF9_003 HL_75407.1 | |
| HL_4V8C_160 | 1/CA/617:623 | No text annotation Not in a motif group | homologous HL_5J7L_014 HL_26881.1 | |
| HL_4V8C_161 | 1/CA/689:698 | No text annotation Not in a motif group | homologous HL_4LFB_015 HL_12326.1 | |
| HL_4V8C_162 | 1/CA/726:731 | Other HL Not in a motif group | homologous HL_4LFB_016 HL_87030.2 | |
| HL_4V8C_163 | 1/CA/786:796 | No text annotation Not in a motif group | homologous HL_4LFB_017 HL_12326.1 | |
| HL_4V8C_164 | 1/CA/838:848 | No text annotation Not in a motif group | homologous HL_6CZR_089 HL_53837.1 | |
| HL_4V8C_165 | 1/CA/862:867 | GNRA Not in a motif group | homologous HL_4LFB_019 HL_42097.2 | |
| HL_4V8C_166 | 1/CA/897:902 | GNRA Not in a motif group | homologous HL_5J7L_020 HL_42097.2 | |
| HL_4V8C_167 | 1/CA/963:972 | No text annotation Not in a motif group | homologous HL_4LFB_021 NA | |
| HL_4V8C_168 | 1/CA/1012:1017 | GNRA Not in a motif group | homologous HL_4LFB_022 HL_42097.2 | |
| HL_4V8C_169 | 1/CA/1028B:1032A | No text annotation Not in a motif group | ||
| HL_4V8C_170 | 1/CA/1076:1081 | GNRA Not in a motif group | homologous HL_5J7L_023 HL_42097.2 | |
| HL_4V8C_171 | 1/CA/1089:1096 | No text annotation Not in a motif group | homologous HL_4LFB_025 HL_71554.2 | |
| HL_4V8C_172 | 1/CA/1134:1140 | No text annotation Not in a motif group | homologous HL_6CZR_097 NA | |
| HL_4V8C_173 | 1/CA/1165:1171 | GNRA Not in a motif group | homologous HL_4LFB_027 HL_42097.2 | |
| HL_4V8C_174 | 1/CA/1265:1270 | GNRA Not in a motif group | homologous HL_5J7L_027 HL_42097.2 | |
| HL_4V8C_175 | 1/CA/1314:1323 | No text annotation Not in a motif group | homologous HL_4LFB_029 HL_89380.2 | |
| HL_4V8C_176 | 1/CA/1356:1366 | No text annotation Not in a motif group | ||
| HL_4V8C_177 | 1/CA/1449:1454 | No text annotation Not in a motif group | homologous HL_6CZR_102 HL_49722.1 | |
| HL_4V8C_178 | 1/CA/1515:1520 | No text annotation Not in a motif group | homologous HL_4LFB_032 NA | |
| HL_4V8C_179 | 1/CB/12:24 | No text annotation Not in a motif group | ||
| HL_4V8C_180 | 1/CB/32:40 | tRNA anticodon loop Not in a motif group | geometric HL_5IBB_210 HL_53597.2 | |
| HL_4V8C_182 | 1/CB/64:72 | T-loop with 2 stacked bulged bases Not in a motif group | geometric HL_6PMO_005 HL_22280.1 | |
| HL_4V8C_183 | 1/CC/13:23 | No text annotation Not in a motif group | homologous HL_4TUE_033 HL_25462.2 | |
| HL_4V8C_184 | 1/CC/32:40 | No text annotation Not in a motif group | homologous HL_5E81_212 NA | |
| HL_4V8C_185 | 1/CC/54:62 | T-loop with 2 stacked bulged bases Not in a motif group | homologous HL_4V9Q_215 HL_22280.1 | |
| HL_4V8C_186 | 1/CD/12:24 | No text annotation Not in a motif group | homologous HL_5IB8_207 NA | |
| HL_4V8C_188 | 1/CD/52:64 | No text annotation Not in a motif group | ||
| HL_4V8C_189 | 1/DA/12:22 | No text annotation Not in a motif group | homologous HL_4LFB_001 HL_89881.2 | |
| HL_4V8C_190 | 1/DA/82:87 | No text annotation Not in a motif group | ||
| HL_4V8C_191 | 1/DA/158:163 | GNRA Not in a motif group | homologous HL_4LFB_003 HL_42097.2 | |
| HL_4V8C_192 | 1/DA/186F:191A | No text annotation Not in a motif group | homologous HL_6CZR_075 HL_10278.1 | |
| HL_4V8C_193 | 1/DA/201:216 | No text annotation Not in a motif group | homologous HL_4LFB_005 HL_91104.1 | |
| HL_4V8C_194 | 1/DA/259:267 | No text annotation Not in a motif group | homologous HL_4LFB_006 HL_69023.2 | |
| HL_4V8C_195 | 1/DA/296:301 | GNRA Not in a motif group | homologous HL_5J7L_007 HL_42097.2 | |
| HL_4V8C_196 | 1/DA/320:333 | No text annotation Not in a motif group | homologous HL_4LFB_008 HL_81205.2 | |
| HL_4V8C_197 | 1/DA/342:347 | UNCG Not in a motif group | homologous HL_5J7L_009 HL_03562.2 | |
| HL_4V8C_198 | 1/DA/379:384 | GNRA Not in a motif group | homologous HL_4LFB_010 HL_42097.2 | |
| HL_4V8C_199 | 1/DA/419:424 | No text annotation Not in a motif group | homologous HL_6CZR_082 HL_03562.2 | |
| HL_4V8C_200 | 1/DA/458:474 | No text annotation Not in a motif group | homologous HL_4LFB_012 HL_43656.2 | |
| HL_4V8C_201 | 1/DA/522:527 | No text annotation Not in a motif group | geometric HL_5J7L_143 HL_75407.1 | |
| HL_4V8C_202 | 1/DA/617:623 | No text annotation Not in a motif group | homologous HL_5J7L_014 HL_26881.1 | |
| HL_4V8C_203 | 1/DA/689:698 | No text annotation Not in a motif group | homologous HL_4LFB_015 HL_12326.1 | |
| HL_4V8C_204 | 1/DA/726:731 | Other HL Not in a motif group | homologous HL_4LFB_016 HL_87030.2 | |
| HL_4V8C_205 | 1/DA/786:796 | No text annotation Not in a motif group | homologous HL_4LFB_017 HL_12326.1 | |
| HL_4V8C_206 | 1/DA/838:848 | No text annotation Not in a motif group | homologous HL_4LFB_018 HL_38927.2 | |
| HL_4V8C_207 | 1/DA/862:867 | GNRA Not in a motif group | homologous HL_4LFB_019 HL_42097.2 | |
| HL_4V8C_208 | 1/DA/897:902 | GNRA Not in a motif group | homologous HL_5J7L_020 HL_42097.2 | |
| HL_4V8C_209 | 1/DA/963:972 | No text annotation Not in a motif group | homologous HL_4LFB_021 NA | |
| HL_4V8C_210 | 1/DA/1012:1017 | GNRA Not in a motif group | homologous HL_4LFB_022 HL_42097.2 | |
| HL_4V8C_212 | 1/DA/1076:1081 | GNRA Not in a motif group | homologous HL_4LFB_024 HL_42097.2 | |
| HL_4V8C_213 | 1/DA/1089:1096 | No text annotation Not in a motif group | homologous HL_5J7L_024 HL_71554.2 | |
| HL_4V8C_214 | 1/DA/1133:1141 | No text annotation Not in a motif group | ||
| HL_4V8C_215 | 1/DA/1165:1171 | GNRA Not in a motif group | homologous HL_4LFB_027 HL_42097.2 | |
| HL_4V8C_216 | 1/DA/1265:1270 | Other HL Not in a motif group | homologous HL_4LFB_028 HL_42097.2 | |
| HL_4V8C_217 | 1/DA/1314:1323 | No text annotation Not in a motif group | homologous HL_4LFB_029 HL_89380.2 | |
| HL_4V8C_218 | 1/DA/1356:1366 | No text annotation Not in a motif group | homologous HL_4LFB_030 HL_96366.1 | |
| HL_4V8C_219 | 1/DA/1449:1454 | No text annotation Not in a motif group | geometric HL_4TUW_002 HL_28980.1 | |
| HL_4V8C_220 | 1/DA/1515:1520 | No text annotation Not in a motif group | homologous HL_4LFB_032 NA | |
| HL_4V8C_221 | 1/DB/11:25 | No text annotation Not in a motif group | ||
| HL_4V8C_222 | 1/DB/32:40 | tRNA anticodon loop Not in a motif group | geometric HL_4YCO_002 HL_53597.2 | |
| HL_4V8C_224 | 1/DB/64:72 | T-loop with 2 stacked bulged bases Not in a motif group | geometric HL_6PMO_005 HL_22280.1 | |
| HL_4V8C_225 | 1/DC/13:23 | No text annotation Not in a motif group | homologous HL_4TUE_033 HL_25462.2 | |
| HL_4V8C_226 | 1/DC/32:40 | No text annotation Not in a motif group | homologous HL_5E81_212 NA | |
| HL_4V8C_227 | 1/DC/54:62 | T-loop with 2 stacked bulged bases Not in a motif group | homologous HL_4V9Q_215 HL_22280.1 | |
| HL_4V8C_228 | 1/DD/12:24 | No text annotation Not in a motif group | geometric HL_5TBW_012 HL_86373.2 | |
| HL_4V8C_229 | 1/DD/32:40 | No text annotation Not in a motif group | ||
| HL_4V8C_230 | 1/DD/52:64 | No text annotation Not in a motif group |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_4V8C_022 | No text annotation | ||
| HL_4V8C_078 | No text annotation | ||
| HL_4V8C_095 | No text annotation | ||
| HL_4V8C_148 | No text annotation | ||
| HL_4V8C_181 | No text annotation | ||
| HL_4V8C_187 | No text annotation | ||
| HL_4V8C_211 | No text annotation | ||
| HL_4V8C_223 | GNRA |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_4V8C_001 | 1/AA/24:30, 1/AA/510:516 | Triple sheared with non-canonical cWW Not in a motif group | homologous IL_7RQB_001 IL_66414.6 | |
| IL_4V8C_002 | 1/AA/36:37, 1/AA/442:444 | Single bulged A Not in a motif group | homologous IL_7RQB_002 IL_37497.3 | |
| IL_4V8C_003 | 1/AA/43:45, 1/AA/433:436 | Major groove platform with extra cWW Not in a motif group | geometric IL_4V9F_003 IL_18471.2 | |
| IL_4V8C_004 | 1/AA/81:85, 1/AA/97:105 | Kink-turn Not in a motif group | homologous IL_7RQB_004 IL_45067.2 | |
| IL_4V8C_005 | 1/AA/183:184, 1/AA/212:214 | Single stack bend Not in a motif group | homologous IL_7RQB_005 IL_76488.2 | |
| IL_4V8C_006 | 1/AA/188:194, 1/AA/201:208 | 8x7 Sarcin-Ricin; G-bulge Not in a motif group | homologous IL_7RQB_006 IL_04346.7 | |
| IL_4V8C_007 | 1/AA/239:245, 1/AA/253:258 | 7x6 Sarcin-Ricin; G-bulge Not in a motif group | homologous IL_7RQB_007 IL_76042.2 | |
| IL_4V8C_008 | 1/AA/270J:270K, 1/AA/270N:270P | Single bulged U Not in a motif group | homologous IL_7RQB_008 IL_83039.14 | |
| IL_4V8C_009 | 1/AA/271:272, 1/AA/365:366 | No text annotation Not in a motif group | ||
| IL_4V8C_010 | 1/AA/273:273A, 1/AA/363E:364 | Major groove platform Not in a motif group | homologous IL_7RQB_009 IL_27635.2 | |
| IL_4V8C_011 | 1/AA/273F:279, 1/AA/361:363 | No text annotation Not in a motif group | ||
| IL_4V8C_012 | 1/AA/280:284, 1/AA/357:360 | tSH-tHW Not in a motif group | homologous IL_7RQB_011 IL_04059.1 | |
| IL_4V8C_013 | 1/AA/288:290, 1/AA/350:353 | Isolated tHS basepair with bulges Not in a motif group | homologous IL_7RQB_012 IL_38958.7 | |
| IL_4V8C_014 | 1/AA/293:295, 1/AA/343:347 | No text annotation Not in a motif group | homologous IL_7RQB_013 IL_69440.1 | |
| IL_4V8C_015 | 1/AA/378:380, 1/AA/394:396 | No text annotation Not in a motif group | geometric IL_7RQB_083 IL_95997.1 | |
| IL_4V8C_016 | 1/AA/481:484, 1/AA/496:509 | No text annotation Not in a motif group | homologous IL_7RQB_014 IL_60992.6 | |
| IL_4V8C_017 | 1/AA/564:566, 1/AA/575:577 | No text annotation Not in a motif group | geometric IL_7RQB_015 IL_95997.1 | |
| IL_4V8C_018 | 1/AA/606:609A, 1/AA/618A:622 | AAA cross-strand stack Not in a motif group | homologous IL_4WF9_019 IL_17136.1 | |
| IL_4V8C_019 | 1/AA/672:674, 1/AA/806:808 | No text annotation Not in a motif group | geometric IL_7RQB_017 IL_95997.1 | |
| IL_4V8C_020 | 1/AA/674:678, 1/AA/799:806 | tHW-tHW cross-strand stack Not in a motif group | homologous IL_4WF9_021 IL_17470.6 | |
| IL_4V8C_021 | 1/AA/697:698, 1/AA/763:765 | Single bulged A Not in a motif group | homologous IL_7RQB_019 IL_37497.3 | |
| IL_4V8C_022 | 1/AA/702:703, 1/AA/728:730 | Single bulged G Not in a motif group | homologous IL_7RQB_020 IL_00225.3 | |
| IL_4V8C_023 | 1/AA/703:707, 1/AA/724:728 | Triple sheared Not in a motif group | geometric IL_7RQB_021 IL_56467.8 | |
| IL_4V8C_024 | 1/AA/738:741, 1/AA/756:758 | Major groove platform with extra cWW Not in a motif group | homologous IL_7RQB_022 IL_05564.2 | |
| IL_4V8C_025 | 1/AA/775:777, 1/AA/787:791 | Multiple bulged bases Not in a motif group | homologous IL_7RQB_023 IL_90991.6 | |
| IL_4V8C_026 | 1/AA/837:838, 1/AA/940:942 | Single stack bend Not in a motif group | homologous IL_4WF9_028 IL_92001.1 | |
| IL_4V8C_027 | 1/AA/844:846, 1/AA/931:934 | Intercalated cWW Not in a motif group | geometric IL_7RQB_025 IL_52767.2 | |
| IL_4V8C_028 | 1/AA/846:850, 1/AA/928:931 | No text annotation Not in a motif group | homologous IL_7RQB_026 IL_94165.1 | |
| IL_4V8C_029 | 1/AA/858:862, 1/AA/915:919 | 5x5 Sarcin-Ricin with intercalated A; G-bulge Not in a motif group | geometric IL_7RQB_027 IL_38862.1 | |
| IL_4V8C_030 | 1/AA/862:863, 1/AA/913:915 | Minor groove platform Not in a motif group | homologous IL_7RQB_028 IL_42622.2 | |
| IL_4V8C_031 | 1/AA/864:868, 1/AA/909:912 | C-loop Not in a motif group | homologous IL_7RQB_029 IL_02509.1 | |
| IL_4V8C_032 | 1/AA/870:872, 1/AA/905:907 | Isolated cWS basepair Not in a motif group | homologous IL_4WF9_034 IL_52767.2 | |
| IL_4V8C_033 | 1/AA/875:879, 1/AA/898:902 | Triple sheared Not in a motif group | homologous IL_5J7L_274 IL_56467.8 | |
| IL_4V8C_034 | 1/AA/880:881, 1/AA/895:897 | No text annotation Not in a motif group | ||
| IL_4V8C_035 | 1/AA/952:954, 1/AA/963:965 | No text annotation Not in a motif group | homologous IL_7RQB_034 IL_95997.1 | |
| IL_4V8C_036 | 1/AA/994:996, 1/AA/1159:1160 | Single bulged C Not in a motif group | homologous IL_7RQB_035 IL_61258.12 | |
| IL_4V8C_037 | 1/AA/998:1002, 1/AA/1153:1157 | UAA/GAN Not in a motif group | homologous IL_7RQB_036 IL_89002.2 | |
| IL_4V8C_038 | 1/AA/1004:1011, 1/AA/1150:1151 | SSU/LSU pseudoknot Not in a motif group | geometric IL_7RQB_037 IL_15861.7 | |
| IL_4V8C_039 | 1/AA/1011:1013, 1/AA/1149:1150 | Single bulged U Not in a motif group | homologous IL_7RQB_038 IL_83039.14 | |
| IL_4V8C_040 | 1/AA/1018:1024, 1/AA/1140:1144 | No text annotation Not in a motif group | homologous IL_4WF9_039 IL_57188.3 | |
| IL_4V8C_041 | 1/AA/1024:1030, 1/AA/1124:1140 | No text annotation Not in a motif group | geometric IL_7RQB_040 IL_50715.1 | |
| IL_4V8C_042 | 1/AA/1031:1034, 1/AA/1121:1123 | Isolated non-canonical cWW with bulges Not in a motif group | homologous IL_7RQB_041 IL_82068.2 | |
| IL_4V8C_043 | 1/AA/1043:1051, 1/AA/1108:1112 | Kink-turn Not in a motif group | homologous IL_5J7L_284 IL_90538.4 | |
| IL_4V8C_044 | 1/AA/1059:1063, 1/AA/1075:1079 | No text annotation Not in a motif group | ||
| IL_4V8C_045 | 1/AA/1087:1091, 1/AA/1100:1102 | No text annotation Not in a motif group | homologous IL_7RQB_044 NA | |
| IL_4V8C_046 | 1/AA/1196:1198, 1/AA/1247:1250 | Isolated cWS basepair Not in a motif group | homologous IL_7RQB_045 IL_52767.2 | |
| IL_4V8C_047 | 1/AA/1202:1206, 1/AA/1240:1243 | No text annotation Not in a motif group | homologous IL_7RQB_046 IL_68574.2 | |
| IL_4V8C_048 | 1/AA/1208:1215, 1/AA/1234:1238 | Kink-turn Not in a motif group | homologous IL_7RQB_047 IL_70923.2 | |
| IL_4V8C_049 | 1/AA/1219:1221, 1/AA/1229A:1230 | Single bulged A Not in a motif group | homologous IL_7RQB_048 IL_37497.3 | |
| IL_4V8C_050 | 1/AA/1262:1269, 1/AA/2011:2017 | 8x7 Sarcin-Ricin; G-bulge Not in a motif group | homologous IL_7RQB_049 IL_04346.7 | |
| IL_4V8C_051 | 1/AA/1310:1313, 1/AA/1603:1604 | Major groove platform; stack outside cWW Not in a motif group | homologous IL_7RQB_050 IL_50694.2 | |
| IL_4V8C_052 | 1/AA/1319:1323, 1/AA/1331:1333 | C-loop Not in a motif group | homologous IL_7RQB_051 IL_63596.6 | |
| IL_4V8C_053 | 1/AA/1351:1355, 1/AA/1376:1380 | UAA/GAN Not in a motif group | homologous IL_7RQB_052 IL_89002.2 | |
| IL_4V8C_054 | 1/AA/1357:1361, 1/AA/1370:1374 | tSH-tHW-tHS Not in a motif group | homologous IL_7RQB_053 IL_17136.1 | |
| IL_4V8C_055 | 1/AA/1415:1416, 1/AA/1582:1587 | No text annotation Not in a motif group | homologous IL_7RQB_054 IL_67474.4 | |
| IL_4V8C_056 | 1/AA/1417:1421, 1/AA/1577:1581 | UAA/GAN Not in a motif group | homologous IL_7RQB_055 IL_89002.2 | |
| IL_4V8C_057 | 1/AA/1433:1435, 1/AA/1557:1560 | Isolated tWW turn Not in a motif group | homologous IL_7RQB_056 IL_54997.7 | |
| IL_4V8C_058 | 1/AA/1437:1440, 1/AA/1551:1555 | tSH-tHW Not in a motif group | homologous IL_7RQB_057 IL_04059.1 | |
| IL_4V8C_059 | 1/AA/1448:1449A, 1/AA/1462:1463 | Single stack bend Not in a motif group | homologous IL_7RQB_058 IL_76488.2 | |
| IL_4V8C_060 | 1/AA/1450:1451, 1/AA/1459:1461 | Single bulged A Not in a motif group | geometric IL_7RQB_059 IL_37497.3 | |
| IL_4V8C_061 | 1/AA/1469:1473, 1/AA/1520:1523 | UAA/GAN Not in a motif group | homologous IL_7RQB_060 IL_07235.1 | |
| IL_4V8C_062 | 1/AA/1480:1483, 1/AA/1506:1513 | No text annotation Not in a motif group | ||
| IL_4V8C_063 | 1/AA/1489:1491, 1/AA/1499:1500 | Single bulged A Not in a motif group | homologous IL_7RQB_062 IL_37497.3 | |
| IL_4V8C_064 | 1/AA/1526:1530, 1/AA/1541:1546 | No text annotation Not in a motif group | homologous IL_7RQB_063 IL_02656.1 | |
| IL_4V8C_065 | 1/AA/1651:1656, 1/AA/2004:2006 | No text annotation Not in a motif group | homologous IL_7RQB_064 IL_12566.2 | |
| IL_4V8C_066 | 1/AA/1663:1665, 1/AA/1995:1997 | Isolated tWW turn Not in a motif group | homologous IL_7RQB_065 IL_54997.7 | |
| IL_4V8C_067 | 1/AA/1666:1669, 1/AA/1993:1994 | Major groove platform; stack outside cWW Not in a motif group | homologous IL_7RQB_066 IL_50694.2 | |
| IL_4V8C_068 | 1/AA/1669:1674, 1/AA/1990:1993 | Intercalated tWH Not in a motif group | geometric IL_7RQB_067 IL_82842.2 | |
| IL_4V8C_069 | 1/AA/1686:1691, 1/AA/1696:1702 | tSH-tSH-tHH-tHS Not in a motif group | geometric IL_7RQB_068 IL_65969.2 | |
| IL_4V8C_070 | 1/AA/1770:1771, 1/AA/1980:1982 | Single bulged A Not in a motif group | homologous IL_7RQB_069 IL_37497.3 | |
| IL_4V8C_071 | 1/AA/1798:1804, 1/AA/1813:1821 | Kink-turn related Not in a motif group | homologous IL_7RQB_070 IL_17069.3 | |
| IL_4V8C_072 | 1/AA/1837:1840, 1/AA/1902:1903 | Major groove outside cWW, minor groove, intercalation pocket Not in a motif group | homologous IL_7RQB_071 IL_88739.1 | |
| IL_4V8C_073 | 1/AA/1841:1842, 1/AA/1898:1901 | Major groove outside cWW, minor groove, intercalation pocket Not in a motif group | homologous IL_5J7L_315 IL_16396.2 | |
| IL_4V8C_074 | 1/AA/1846:1849, 1/AA/1893:1894 | Minor groove platform Not in a motif group | homologous IL_7RQB_073 IL_88739.1 | |
| IL_4V8C_075 | 1/AA/1851:1855, 1/AA/1887:1891 | UAA/GAN with extra pair Not in a motif group | homologous IL_7RQB_074 IL_90318.1 | |
| IL_4V8C_076 | 1/AA/1856:1860, 1/AA/1882:1886 | Triple sheared Not in a motif group | homologous IL_7RQB_075 IL_56467.8 | |
| IL_4V8C_077 | 1/AA/1933:1934, 1/AA/1964:1967 | Multiple bulged bases Not in a motif group | homologous IL_5J7L_318 IL_59677.2 | |
| IL_4V8C_078 | 1/AA/1934:1945, 1/AA/1961:1964 | No text annotation Not in a motif group | geometric IL_7A0S_072 IL_81589.2 | |
| IL_4V8C_079 | 1/AA/2050:2052, 1/AA/2617:2618 | Major groove platform Not in a motif group | homologous IL_7RQB_078 IL_27635.2 | |
| IL_4V8C_080 | 1/AA/2054:2057, 1/AA/2611:2615 | No text annotation Not in a motif group | ||
| IL_4V8C_081 | 1/AA/2067:2069, 1/AA/2442:2443 | Single bulged U Not in a motif group | homologous IL_7RQB_080 IL_83039.14 | |
| IL_4V8C_082 | 1/AA/2070:2071, 1/AA/2438:2441 | Minor groove platform Not in a motif group | homologous IL_7RQB_081 IL_42622.2 | |
| IL_4V8C_083 | 1/AA/2081:2083, 1/AA/2236:2239 | Isolated tHS basepair with bulges Not in a motif group | homologous IL_7RQB_082 IL_38958.7 | |
| IL_4V8C_084 | 1/AA/2085:2087, 1/AA/2232:2234 | No text annotation Not in a motif group | homologous IL_7RQB_083 IL_95997.1 | |
| IL_4V8C_085 | 1/AA/2108:2110, 1/AA/2179:2181 | No text annotation Not in a motif group | geometric IL_5VCI_001 IL_95997.1 | |
| IL_4V8C_086 | 1/AA/2110:2120, 1/AA/2178:2179 | No text annotation Not in a motif group | ||
| IL_4V8C_087 | 1/AA/2124:2127, 1/AA/2161:2174 | No text annotation Not in a motif group | ||
| IL_4V8C_088 | 1/AA/2129:2136, 1/AA/2155:2159 | Kink-turn Not in a motif group | homologous IL_3U4M_004 IL_70923.2 | |
| IL_4V8C_089 | 1/AA/2297:2299, 1/AA/2317:2321 | Isolated tHS basepair with bulges Not in a motif group | homologous IL_7RQB_088 IL_38958.7 | |
| IL_4V8C_090 | 1/AA/2350:2353, 1/AA/2364:2367 | Double sheared Not in a motif group | homologous IL_7RQB_089 IL_09705.9 | |
| IL_4V8C_091 | 1/AA/2401:2403, 1/AA/2414:2415 | Minor groove platform Not in a motif group | geometric IL_5TBW_039 IL_42622.2 | |
| IL_4V8C_092 | 1/AA/2453:2454, 1/AA/2498:2500 | Single stack bend Not in a motif group | geometric IL_7RQB_091 IL_76488.2 | |
| IL_4V8C_093 | 1/AA/2454:2455, 1/AA/2496:2498 | Major groove platform Not in a motif group | homologous IL_7RQB_092 IL_27635.2 | |
| IL_4V8C_094 | 1/AA/2457:2459, 1/AA/2493:2494 | Major groove platform Not in a motif group | geometric IL_4WF9_091 IL_27635.2 | |
| IL_4V8C_095 | 1/AA/2459:2461, 1/AA/2489:2493 | Major groove minor groove platform with extra cWW Not in a motif group | homologous IL_7RQB_094 IL_92788.2 | |
| IL_4V8C_096 | 1/AA/2466:2470, 1/AA/2480:2484 | Triple sheared Not in a motif group | homologous IL_5J7L_338 IL_56467.8 | |
| IL_4V8C_097 | 1/AA/2507:2508, 1/AA/2580:2582 | Major groove platform Not in a motif group | homologous IL_7RQB_096 IL_76223.2 | |
| IL_4V8C_098 | 1/AA/2510:2512, 1/AA/2574:2578 | Isolated non-canonical cWW with bulges Not in a motif group | homologous IL_7RQB_097 IL_90933.2 | |
| IL_4V8C_099 | 1/AA/2512:2513, 1/AA/2571:2574 | Multiple bulged bases Not in a motif group | geometric IL_7RQB_098 IL_71530.2 | |
| IL_4V8C_100 | 1/AA/2522:2523, 1/AA/2540:2543 | Minor groove platform with intercalation Not in a motif group | homologous IL_7RQB_099 IL_95601.3 | |
| IL_4V8C_101 | 1/AA/2591:2592, 1/AA/2601:2603 | Single bulged A Not in a motif group | homologous IL_7RQB_101 IL_37497.3 | |
| IL_4V8C_102 | 1/AA/2636:2640, 1/AA/2774:2782 | tSH-tHS-tHW Not in a motif group | homologous IL_7RQB_102 IL_04638.1 | |
| IL_4V8C_103 | 1/AA/2652:2658, 1/AA/2663:2668 | Sarcin-Ricin target in LSU H95; G-bulge Not in a motif group | geometric IL_7RQB_103 IL_16458.1 | |
| IL_4V8C_104 | 1/AA/2680:2684, 1/AA/2725:2727 | C-loop Not in a motif group | homologous IL_7RQB_104 IL_63596.6 | |
| IL_4V8C_105 | 1/AA/2687:2691, 1/AA/2718:2722 | No text annotation Not in a motif group | homologous IL_7RQB_105 IL_08296.3 | |
| IL_4V8C_106 | 1/AA/2695:2696, 1/AA/2711:2714 | Multiple bulged bases Not in a motif group | homologous IL_7RQB_106 IL_71530.2 | |
| IL_4V8C_107 | 1/AA/2737:2742, 1/AA/2762:2767 | UAA/GAN with extra cWW Not in a motif group | homologous IL_7RQB_107 IL_49767.5 | |
| IL_4V8C_108 | 1/AA/2838:2839, 1/AA/2878:2880 | Single bulged C Not in a motif group | homologous IL_7RQB_108 IL_61258.12 | |
| IL_4V8C_109 | 1/AA/2843:2846, 1/AA/2870:2874 | No text annotation Not in a motif group | homologous IL_7RQB_109 IL_58764.3 | |
| IL_4V8C_110 | 1/AA/2847:2852, 1/AA/2865:2869 | No text annotation Not in a motif group | homologous IL_7RQB_110 IL_83162.5 | |
| IL_4V8C_111 | 1/AB/1:2, 1/AB/118:119 | No text annotation Not in a motif group | ||
| IL_4V8C_112 | 1/AB/17:18, 1/AB/65:67 | Major groove intercalation Not in a motif group | homologous IL_7RQB_111 IL_37497.3 | |
| IL_4V8C_113 | 1/AB/23:28, 1/AB/56:60 | No text annotation Not in a motif group | homologous IL_7RQB_112 NA | |
| IL_4V8C_114 | 1/AB/30:31, 1/AB/51:54 | Major groove minor groove platform; mini C-loop Not in a motif group | homologous IL_7RQB_113 IL_09061.6 | |
| IL_4V8C_115 | 1/AB/34:38, 1/AB/44:48 | Symmetric double minor groove platform Not in a motif group | geometric IL_7RQB_114 IL_58103.6 | |
| IL_4V8C_116 | 1/AB/71:79, 1/AB/97:105 | Bacterial 5S Loop E Not in a motif group | homologous IL_7RQB_115 IL_56455.3 | |
| IL_4V8C_117 | 1/AB/80:82, 1/AB/94:96 | No text annotation Not in a motif group | geometric IL_7A0S_107 IL_51629.2 | |
| IL_4V8C_119 | 1/BA/24:30, 1/BA/510:516 | Triple sheared with non-canonical cWW Not in a motif group | homologous IL_7RQB_001 IL_66414.6 | |
| IL_4V8C_120 | 1/BA/36:37, 1/BA/442:444 | Single bulged A Not in a motif group | homologous IL_7RQB_002 IL_37497.3 | |
| IL_4V8C_121 | 1/BA/43:45, 1/BA/433:436 | Major groove platform with extra cWW Not in a motif group | geometric IL_3PDR_004 IL_18471.2 | |
| IL_4V8C_122 | 1/BA/81:85, 1/BA/97:105 | Kink-turn Not in a motif group | homologous IL_7RQB_004 IL_45067.2 | |
| IL_4V8C_123 | 1/BA/183:184, 1/BA/212:214 | Single stack bend Not in a motif group | homologous IL_7RQB_005 IL_76488.2 | |
| IL_4V8C_124 | 1/BA/188:194, 1/BA/201:208 | 8x7 Sarcin-Ricin; G-bulge Not in a motif group | homologous IL_7RQB_006 IL_04346.7 | |
| IL_4V8C_125 | 1/BA/239:245, 1/BA/253:258 | 7x6 Sarcin-Ricin; G-bulge Not in a motif group | homologous IL_7RQB_007 IL_76042.2 | |
| IL_4V8C_126 | 1/BA/270J:270K, 1/BA/270N:270P | Single bulged U Not in a motif group | homologous IL_7RQB_008 IL_83039.14 | |
| IL_4V8C_127 | 1/BA/271:272, 1/BA/365:366 | No text annotation Not in a motif group | ||
| IL_4V8C_128 | 1/BA/273:273A, 1/BA/363E:364 | Major groove platform Not in a motif group | homologous IL_7RQB_009 IL_27635.2 | |
| IL_4V8C_129 | 1/BA/273F:279, 1/BA/361:363 | No text annotation Not in a motif group | ||
| IL_4V8C_130 | 1/BA/280:284, 1/BA/357:360 | tSH-tHW Not in a motif group | homologous IL_7RQB_011 IL_04059.1 | |
| IL_4V8C_131 | 1/BA/288:290, 1/BA/350:353 | Isolated tHS basepair with bulges Not in a motif group | homologous IL_7RQB_012 IL_38958.7 | |
| IL_4V8C_132 | 1/BA/293:295, 1/BA/343:347 | No text annotation Not in a motif group | homologous IL_7RQB_013 IL_69440.1 | |
| IL_4V8C_133 | 1/BA/481:484, 1/BA/496:509 | No text annotation Not in a motif group | homologous IL_7RQB_014 IL_60992.6 | |
| IL_4V8C_134 | 1/BA/564:566, 1/BA/575:577 | No text annotation Not in a motif group | homologous IL_7RQB_015 IL_95997.1 | |
| IL_4V8C_135 | 1/BA/606:609A, 1/BA/618A:622 | AAA cross-strand stack Not in a motif group | homologous IL_4WF9_019 IL_17136.1 | |
| IL_4V8C_136 | 1/BA/672:674, 1/BA/806:808 | No text annotation Not in a motif group | homologous IL_5J7L_259 IL_95997.1 | |
| IL_4V8C_137 | 1/BA/674:678, 1/BA/799:806 | tHW-tHW cross-strand stack Not in a motif group | geometric IL_4WF9_021 IL_17470.6 | |
| IL_4V8C_138 | 1/BA/697:698, 1/BA/763:765 | Single bulged A Not in a motif group | homologous IL_7RQB_019 IL_37497.3 | |
| IL_4V8C_139 | 1/BA/702:703, 1/BA/728:730 | Single bulged G Not in a motif group | homologous IL_7RQB_020 IL_00225.3 | |
| IL_4V8C_140 | 1/BA/703:707, 1/BA/724:728 | Triple sheared Not in a motif group | geometric IL_7RQB_021 IL_56467.8 | |
| IL_4V8C_141 | 1/BA/738:741, 1/BA/756:758 | Major groove platform with extra cWW Not in a motif group | homologous IL_7RQB_022 IL_05564.2 | |
| IL_4V8C_142 | 1/BA/775:777, 1/BA/787:791 | Multiple bulged bases Not in a motif group | geometric IL_7RQB_023 IL_90991.6 | |
| IL_4V8C_143 | 1/BA/837:838, 1/BA/940:942 | Single stack bend Not in a motif group | homologous IL_4WF9_028 IL_92001.1 | |
| IL_4V8C_144 | 1/BA/844:846, 1/BA/931:934 | Intercalated cWW Not in a motif group | geometric IL_7RQB_025 IL_52767.2 | |
| IL_4V8C_145 | 1/BA/846:850, 1/BA/928:931 | No text annotation Not in a motif group | homologous IL_7RQB_026 IL_94165.1 | |
| IL_4V8C_146 | 1/BA/858:862, 1/BA/915:919 | 5x5 Sarcin-Ricin with intercalated A; G-bulge Not in a motif group | geometric IL_7RQB_027 IL_38862.1 | |
| IL_4V8C_147 | 1/BA/862:863, 1/BA/913:915 | Minor groove platform Not in a motif group | homologous IL_7RQB_028 IL_42622.2 | |
| IL_4V8C_148 | 1/BA/864:868, 1/BA/909:912 | C-loop Not in a motif group | homologous IL_7RQB_029 IL_02509.1 | |
| IL_4V8C_149 | 1/BA/870:872, 1/BA/905:907 | Isolated near basepair Not in a motif group | homologous IL_7A0S_030 IL_52767.2 | |
| IL_4V8C_150 | 1/BA/875:879, 1/BA/898:902 | Triple sheared Not in a motif group | homologous IL_5J7L_274 IL_56467.8 | |
| IL_4V8C_151 | 1/BA/879:882, 1/BA/894:898 | No text annotation Not in a motif group | ||
| IL_4V8C_152 | 1/BA/952:954, 1/BA/963:965 | No text annotation Not in a motif group | homologous IL_7RQB_034 IL_95997.1 | |
| IL_4V8C_153 | 1/BA/994:996, 1/BA/1159:1160 | Single bulged C Not in a motif group | homologous IL_5J7L_276 IL_61258.12 | |
| IL_4V8C_154 | 1/BA/998:1002, 1/BA/1153:1157 | UAA/GAN Not in a motif group | homologous IL_7RQB_036 IL_89002.2 | |
| IL_4V8C_155 | 1/BA/1004:1011, 1/BA/1150:1151 | SSU/LSU pseudoknot Not in a motif group | homologous IL_5J7L_278 IL_15861.7 | |
| IL_4V8C_156 | 1/BA/1011:1013, 1/BA/1149:1150 | Single bulged U Not in a motif group | geometric IL_5J7L_279 IL_83039.14 | |
| IL_4V8C_157 | 1/BA/1018:1024, 1/BA/1140:1144 | No text annotation Not in a motif group | homologous IL_4WF9_039 IL_57188.3 | |
| IL_4V8C_158 | 1/BA/1024:1030, 1/BA/1124:1140 | No text annotation Not in a motif group | geometric IL_7RQB_040 IL_50715.1 | |
| IL_4V8C_159 | 1/BA/1031:1034, 1/BA/1121:1123 | Isolated non-canonical cWW with bulges Not in a motif group | homologous IL_7RQB_041 IL_82068.2 | |
| IL_4V8C_160 | 1/BA/1043:1051, 1/BA/1108:1112 | Kink-turn Not in a motif group | homologous IL_7RQB_042 IL_90538.4 | |
| IL_4V8C_161 | 1/BA/1059:1062, 1/BA/1076:1079 | No text annotation Not in a motif group | homologous IL_6PRV_001 IL_23544.2 | |
| IL_4V8C_163 | 1/BA/1087:1091, 1/BA/1100:1102 | No text annotation Not in a motif group | homologous IL_7RQB_044 NA | |
| IL_4V8C_165 | 1/BA/1196:1198, 1/BA/1247:1250 | Isolated cWS basepair Not in a motif group | homologous IL_7RQB_045 IL_52767.2 | |
| IL_4V8C_166 | 1/BA/1202:1206, 1/BA/1240:1243 | No text annotation Not in a motif group | homologous IL_7RQB_046 IL_68574.2 | |
| IL_4V8C_167 | 1/BA/1208:1215, 1/BA/1234:1238 | Kink-turn Not in a motif group | homologous IL_7RQB_047 IL_70923.2 | |
| IL_4V8C_168 | 1/BA/1219:1221, 1/BA/1229A:1230 | Single bulged A Not in a motif group | homologous IL_7RQB_048 IL_37497.3 | |
| IL_4V8C_169 | 1/BA/1262:1269, 1/BA/2011:2017 | 8x7 Sarcin-Ricin; G-bulge Not in a motif group | homologous IL_7RQB_049 IL_04346.7 | |
| IL_4V8C_170 | 1/BA/1310:1313, 1/BA/1603:1604 | Major groove platform; stack outside cWW Not in a motif group | homologous IL_7RQB_050 IL_50694.2 | |
| IL_4V8C_171 | 1/BA/1319:1323, 1/BA/1331:1333 | C-loop Not in a motif group | homologous IL_7RQB_051 IL_63596.6 | |
| IL_4V8C_172 | 1/BA/1351:1355, 1/BA/1376:1380 | UAA/GAN Not in a motif group | homologous IL_7RQB_052 IL_89002.2 | |
| IL_4V8C_173 | 1/BA/1357:1361, 1/BA/1370:1374 | tSH-tHW-tHS Not in a motif group | homologous IL_7RQB_053 IL_17136.1 | |
| IL_4V8C_174 | 1/BA/1415:1416, 1/BA/1582:1587 | No text annotation Not in a motif group | homologous IL_7RQB_054 IL_67474.4 | |
| IL_4V8C_175 | 1/BA/1417:1421, 1/BA/1577:1581 | UAA/GAN Not in a motif group | homologous IL_7RQB_055 IL_89002.2 | |
| IL_4V8C_176 | 1/BA/1433:1435, 1/BA/1557:1560 | Isolated tWW turn Not in a motif group | homologous IL_7RQB_056 IL_54997.7 | |
| IL_4V8C_177 | 1/BA/1437:1440, 1/BA/1551:1555 | tSH-tHW Not in a motif group | homologous IL_7RQB_057 IL_04059.1 | |
| IL_4V8C_178 | 1/BA/1448:1449A, 1/BA/1462:1463 | Single stack bend Not in a motif group | homologous IL_7RQB_058 IL_76488.2 | |
| IL_4V8C_179 | 1/BA/1450:1451, 1/BA/1459:1461 | Single bulged A Not in a motif group | geometric IL_7RQB_059 IL_37497.3 | |
| IL_4V8C_180 | 1/BA/1469:1473, 1/BA/1520:1523 | UAA/GAN Not in a motif group | homologous IL_7RQB_060 IL_07235.1 | |
| IL_4V8C_181 | 1/BA/1482:1483, 1/BA/1506:1512 | No text annotation Not in a motif group | homologous IL_7RQB_061 IL_52493.1 | |
| IL_4V8C_182 | 1/BA/1489:1491, 1/BA/1499:1500 | Single bulged A Not in a motif group | homologous IL_7RQB_062 IL_37497.3 | |
| IL_4V8C_183 | 1/BA/1526:1530, 1/BA/1541:1546 | No text annotation Not in a motif group | homologous IL_7RQB_063 IL_02656.1 | |
| IL_4V8C_184 | 1/BA/1651:1656, 1/BA/2004:2006 | No text annotation Not in a motif group | homologous IL_7RQB_064 IL_12566.2 | |
| IL_4V8C_185 | 1/BA/1663:1665, 1/BA/1995:1997 | Isolated tWW turn Not in a motif group | homologous IL_7RQB_065 IL_54997.7 | |
| IL_4V8C_186 | 1/BA/1666:1669, 1/BA/1993:1994 | Major groove platform; stack outside cWW Not in a motif group | homologous IL_7RQB_066 IL_50694.2 | |
| IL_4V8C_187 | 1/BA/1669:1674, 1/BA/1990:1993 | Intercalated tWH Not in a motif group | geometric IL_7RQB_067 IL_82842.2 | |
| IL_4V8C_188 | 1/BA/1686:1691, 1/BA/1696:1702 | tSH-tSH-tHH-tHS Not in a motif group | geometric IL_7RQB_068 IL_65969.2 | |
| IL_4V8C_189 | 1/BA/1770:1771, 1/BA/1980:1982 | Single bulged A Not in a motif group | homologous IL_7RQB_069 IL_37497.3 | |
| IL_4V8C_190 | 1/BA/1798:1804, 1/BA/1813:1821 | Kink-turn related Not in a motif group | homologous IL_7RQB_070 IL_17069.3 | |
| IL_4V8C_191 | 1/BA/1837:1840, 1/BA/1902:1903 | Major groove outside cWW, minor groove, intercalation pocket Not in a motif group | homologous IL_5J7L_314 IL_88739.1 | |
| IL_4V8C_192 | 1/BA/1841:1842, 1/BA/1898:1901 | Major groove outside cWW, minor groove, intercalation pocket Not in a motif group | homologous IL_5J7L_315 IL_16396.2 | |
| IL_4V8C_193 | 1/BA/1846:1849, 1/BA/1893:1894 | Minor groove platform Not in a motif group | homologous IL_7RQB_073 IL_88739.1 | |
| IL_4V8C_194 | 1/BA/1851:1855, 1/BA/1887:1891 | UAA/GAN with extra pair Not in a motif group | homologous IL_7RQB_074 IL_90318.1 | |
| IL_4V8C_195 | 1/BA/1856:1860, 1/BA/1882:1886 | Triple sheared Not in a motif group | homologous IL_7RQB_075 IL_56467.8 | |
| IL_4V8C_196 | 1/BA/1933:1934, 1/BA/1964:1967 | Multiple bulged bases Not in a motif group | homologous IL_7RQB_076 IL_59677.2 | |
| IL_4V8C_197 | 1/BA/1934:1945, 1/BA/1961:1964 | No text annotation Not in a motif group | geometric IL_4WF9_077 IL_81589.2 | |
| IL_4V8C_198 | 1/BA/2050:2052, 1/BA/2617:2618 | Major groove platform Not in a motif group | homologous IL_7RQB_078 IL_27635.2 | |
| IL_4V8C_199 | 1/BA/2054:2057, 1/BA/2611:2615 | No text annotation Not in a motif group | homologous IL_7RQB_079 IL_01206.1 | |
| IL_4V8C_200 | 1/BA/2067:2069, 1/BA/2442:2443 | Single bulged U Not in a motif group | homologous IL_7RQB_080 IL_83039.14 | |
| IL_4V8C_201 | 1/BA/2070:2071, 1/BA/2438:2441 | Minor groove platform Not in a motif group | homologous IL_5J7L_324 IL_42622.2 | |
| IL_4V8C_202 | 1/BA/2081:2083, 1/BA/2236:2239 | Isolated tHS basepair with bulges Not in a motif group | homologous IL_7RQB_082 IL_38958.7 | |
| IL_4V8C_203 | 1/BA/2085:2087, 1/BA/2232:2234 | No text annotation Not in a motif group | homologous IL_7RQB_083 IL_95997.1 | |
| IL_4V8C_204 | 1/BA/2108:2110, 1/BA/2179:2181 | No text annotation Not in a motif group | homologous IL_7RQB_084 NA | |
| IL_4V8C_205 | 1/BA/2110:2120, 1/BA/2178:2179 | No text annotation Not in a motif group | ||
| IL_4V8C_206 | 1/BA/2124:2127, 1/BA/2161:2174 | No text annotation Not in a motif group | ||
| IL_4V8C_207 | 1/BA/2129:2136, 1/BA/2155:2159 | Kink-turn Not in a motif group | homologous IL_5J7L_330 IL_70923.2 | |
| IL_4V8C_208 | 1/BA/2297:2299, 1/BA/2317:2321 | Isolated tHS basepair with bulges Not in a motif group | geometric IL_4WF9_086 IL_38958.7 | |
| IL_4V8C_209 | 1/BA/2350:2353, 1/BA/2364:2367 | Double sheared Not in a motif group | homologous IL_7RQB_089 IL_09705.9 | |
| IL_4V8C_210 | 1/BA/2401:2403, 1/BA/2414:2415 | Minor groove platform Not in a motif group | geometric IL_7TZS_003 IL_42622.2 | |
| IL_4V8C_211 | 1/BA/2453:2454, 1/BA/2498:2500 | Single stack bend Not in a motif group | geometric IL_7RQB_091 IL_76488.2 | |
| IL_4V8C_212 | 1/BA/2454:2455, 1/BA/2496:2498 | Major groove platform Not in a motif group | homologous IL_7RQB_092 IL_27635.2 | |
| IL_4V8C_213 | 1/BA/2457:2459, 1/BA/2493:2494 | Major groove platform Not in a motif group | geometric IL_4WF9_091 IL_27635.2 | |
| IL_4V8C_214 | 1/BA/2459:2461, 1/BA/2489:2493 | Major groove minor groove platform with extra cWW Not in a motif group | homologous IL_7RQB_094 IL_92788.2 | |
| IL_4V8C_215 | 1/BA/2466:2470, 1/BA/2480:2484 | Triple sheared Not in a motif group | homologous IL_4WF9_093 IL_56467.8 | |
| IL_4V8C_216 | 1/BA/2507:2508, 1/BA/2580:2582 | Major groove platform Not in a motif group | homologous IL_7RQB_096 IL_76223.2 | |
| IL_4V8C_217 | 1/BA/2510:2512, 1/BA/2574:2578 | Isolated non-canonical cWW with bulges Not in a motif group | homologous IL_7RQB_097 IL_90933.2 | |
| IL_4V8C_218 | 1/BA/2512:2513, 1/BA/2571:2574 | Multiple bulged bases Not in a motif group | geometric IL_7RQB_098 IL_71530.2 | |
| IL_4V8C_219 | 1/BA/2522:2523, 1/BA/2540:2543 | Minor groove platform with intercalation Not in a motif group | homologous IL_7RQB_099 IL_95601.3 | |
| IL_4V8C_220 | 1/BA/2591:2592, 1/BA/2601:2603 | Single bulged A Not in a motif group | homologous IL_5J7L_344 IL_37497.3 | |
| IL_4V8C_221 | 1/BA/2636:2640, 1/BA/2774:2782 | tSH-tHS-tHW Not in a motif group | homologous IL_7RQB_102 IL_04638.1 | |
| IL_4V8C_222 | 1/BA/2652:2658, 1/BA/2663:2668 | Sarcin-Ricin target in LSU H95; G-bulge Not in a motif group | geometric IL_7RQB_103 IL_16458.1 | |
| IL_4V8C_223 | 1/BA/2680:2684, 1/BA/2725:2727 | C-loop Not in a motif group | geometric IL_4MGN_001 IL_75255.1 | |
| IL_4V8C_224 | 1/BA/2687:2691, 1/BA/2718:2722 | No text annotation Not in a motif group | homologous IL_7RQB_105 IL_08296.3 | |
| IL_4V8C_225 | 1/BA/2695:2696, 1/BA/2711:2714 | Multiple bulged bases Not in a motif group | homologous IL_7A0S_097 IL_71530.2 | |
| IL_4V8C_226 | 1/BA/2737:2742, 1/BA/2762:2767 | UAA/GAN with extra cWW Not in a motif group | homologous IL_5J7L_350 IL_49767.5 | |
| IL_4V8C_227 | 1/BA/2838:2839, 1/BA/2878:2880 | Single bulged C Not in a motif group | homologous IL_7RQB_108 IL_61258.12 | |
| IL_4V8C_228 | 1/BA/2843:2846, 1/BA/2870:2874 | No text annotation Not in a motif group | homologous IL_7RQB_109 IL_58764.3 | |
| IL_4V8C_229 | 1/BA/2847:2852, 1/BA/2865:2869 | No text annotation Not in a motif group | homologous IL_7RQB_110 IL_83162.5 | |
| IL_4V8C_230 | 1/BB/17:18, 1/BB/65:67 | Major groove intercalation Not in a motif group | homologous IL_4V9F_101 IL_37497.3 | |
| IL_4V8C_231 | 1/BB/23:28, 1/BB/56:60 | No text annotation Not in a motif group | homologous IL_7RQB_112 NA | |
| IL_4V8C_233 | 1/BB/30:31, 1/BB/51:54 | Major groove minor groove platform; mini C-loop Not in a motif group | homologous IL_7RQB_113 IL_09061.6 | |
| IL_4V8C_234 | 1/BB/34:38, 1/BB/44:48 | Symmetric double minor groove platform Not in a motif group | geometric IL_7RQB_114 IL_58103.6 | |
| IL_4V8C_235 | 1/BB/71:79, 1/BB/97:105 | Bacterial 5S Loop E Not in a motif group | homologous IL_7RQB_115 IL_56455.3 | |
| IL_4V8C_236 | 1/BB/80:82, 1/BB/94:96 | No text annotation Not in a motif group | geometric IL_7A0S_107 IL_51629.2 | |
| IL_4V8C_237 | 1/CA/30:32, 1/CA/552:553 | Single bulged G Not in a motif group | homologous IL_4LFB_001 IL_00225.3 | |
| IL_4V8C_238 | 1/CA/44:45, 1/CA/396:398 | Single bulged A Not in a motif group | homologous IL_4LFB_002 IL_37497.3 | |
| IL_4V8C_239 | 1/CA/47:52, 1/CA/359:361 | No text annotation Not in a motif group | homologous IL_4LFB_003 IL_11178.1 | |
| IL_4V8C_240 | 1/CA/54:56, 1/CA/356:357 | Minor groove platform Not in a motif group | homologous IL_5J7L_004 IL_93353.1 | |
| IL_4V8C_241 | 1/CA/63:66, 1/CA/103:104 | Multiple bulged bases Not in a motif group | homologous IL_4LFB_005 IL_76389.1 | |
| IL_4V8C_242 | 1/CA/67:69, 1/CA/99:102 | No text annotation Not in a motif group | homologous IL_4LFB_006 IL_95997.1 | |
| IL_4V8C_243 | 1/CA/69:74, 1/CA/96:99 | No text annotation Not in a motif group | geometric IL_6CZR_157 IL_95997.1 | |
| IL_4V8C_244 | 1/CA/75:77, 1/CA/92:95 | No text annotation Not in a motif group | geometric IL_353D_001 IL_95997.1 | |
| IL_4V8C_245 | 1/CA/78:81, 1/CA/88:91 | No text annotation Not in a motif group | ||
| IL_4V8C_246 | 1/CA/129:131, 1/CA/231:232 | Multiple bulged bases Not in a motif group | homologous IL_4LFB_007 IL_16396.2 | |
| IL_4V8C_247 | 1/CA/132:136, 1/CA/227:230 | No text annotation Not in a motif group | homologous IL_4LFB_008 IL_58764.3 | |
| IL_4V8C_248 | 1/CA/148:153, 1/CA/168:174 | tWH-tWH-tHW-tHW Not in a motif group | homologous IL_4LFB_009 IL_39753.1 | |
| IL_4V8C_249 | 1/CA/185:186B, 1/CA/191E:192 | No text annotation Not in a motif group | ||
| IL_4V8C_250 | 1/CA/242:247, 1/CA/277:284 | Kink-turn with non-sequential stacking Not in a motif group | homologous IL_4LFB_011 IL_45067.2 | |
| IL_4V8C_251 | 1/CA/249:252, 1/CA/274:275 | No text annotation Not in a motif group | homologous IL_4LFB_012 IL_48100.2 | |
| IL_4V8C_252 | 1/CA/292:293, 1/CA/304:308 | C-loop Not in a motif group | homologous IL_4LFB_013 IL_37712.2 | |
| IL_4V8C_253 | 1/CA/367:369, 1/CA/392:393 | Single bulged U Not in a motif group | homologous IL_4LFB_014 IL_83039.14 | |
| IL_4V8C_254 | 1/CA/371:375, 1/CA/389:390 | C-loop Not in a motif group | geometric IL_5J7L_018 IL_75255.1 | |
| IL_4V8C_255 | 1/CA/375:376, 1/CA/387:389 | Single bulged G Not in a motif group | homologous IL_4LFB_016 IL_00225.3 | |
| IL_4V8C_256 | 1/CA/409:416, 1/CA/427:433 | No text annotation Not in a motif group | homologous IL_4LFB_017 IL_28026.1 | |
| IL_4V8C_257 | 1/CA/446:450, 1/CA/483:488 | 6x5 Sarcin-Ricin; G-bulge Not in a motif group | geometric IL_4LFB_018 IL_88269.3 | |
| IL_4V8C_258 | 1/CA/450:455, 1/CA/477:483 | No text annotation Not in a motif group | homologous IL_4LFB_019 IL_11882.1 | |
| IL_4V8C_259 | 1/CA/504:511, 1/CA/540:541 | SSU/LSU pseudoknot Not in a motif group | homologous IL_5J7L_024 IL_15861.7 | |
| IL_4V8C_260 | 1/CA/515:521, 1/CA/528:536 | No text annotation Not in a motif group | geometric IL_4V88_415 IL_55871.1 | |
| IL_4V8C_261 | 1/CA/569:575, 1/CA/880:881 | No text annotation Not in a motif group | homologous IL_4LFB_022 IL_69996.1 | |
| IL_4V8C_262 | 1/CA/580:584, 1/CA/757:761 | tSH-tHW-tHS Not in a motif group | homologous IL_6CZR_135 IL_17136.1 | |
| IL_4V8C_263 | 1/CA/594:596, 1/CA/644:645 | Major groove platform Not in a motif group | homologous IL_4LFB_024 IL_27635.2 | |
| IL_4V8C_264 | 1/CA/597:598, 1/CA/640:643 | Major groove minor groove platform; mini C-loop Not in a motif group | homologous IL_4LFB_025 IL_09061.6 | |
| IL_4V8C_265 | 1/CA/605:612, 1/CA/628:633 | No text annotation Not in a motif group | homologous IL_5J7L_030 IL_78349.1 | |
| IL_4V8C_266 | 1/CA/654:655, 1/CA/751:754 | Major groove platform; stack outside cWW Not in a motif group | homologous IL_4LFB_027 IL_50694.2 | |
| IL_4V8C_267 | 1/CA/657:658, 1/CA/747:749 | Major groove platform Not in a motif group | homologous IL_4LFB_028 IL_27635.2 | |
| IL_4V8C_268 | 1/CA/662:666, 1/CA/740:743 | Tandem non-canonical cWW pairs Not in a motif group | homologous IL_4LFB_029 IL_71110.1 | |
| IL_4V8C_269 | 1/CA/673:678, 1/CA/712:717 | No text annotation Not in a motif group | homologous IL_4LFB_030 IL_04668.1 | |
| IL_4V8C_270 | 1/CA/683:688, 1/CA/699:707 | Kink-turn Not in a motif group | homologous IL_4LFB_031 IL_37722.1 | |
| IL_4V8C_271 | 1/CA/774:778, 1/CA/804:805 | Left turn Not in a motif group | homologous IL_4LFB_032 IL_29346.1 | |
| IL_4V8C_272 | 1/CA/779:783, 1/CA/799:803 | tSH-tHW-tHS Not in a motif group | homologous IL_4LFB_033 IL_17136.1 | |
| IL_4V8C_273 | 1/CA/887:894, 1/CA/905:910 | 8x6 Sarcin-Ricin with inserted Y; G-bulge Not in a motif group | homologous IL_4LFB_034 IL_24606.2 | |
| IL_4V8C_274 | 1/CA/922:923, 1/CA/1393:1395 | Single bulged A Not in a motif group | homologous IL_5J7L_039 IL_37497.3 | |
| IL_4V8C_275 | 1/CA/925:927, 1/CA/1390:1391 | Single bulged G Not in a motif group | homologous IL_4LFB_036 IL_00225.3 | |
| IL_4V8C_276 | 1/CA/933:935, 1/CA/1380:1384 | Minor groove platform Not in a motif group | homologous IL_4LFB_037 IL_47078.1 | |
| IL_4V8C_277 | 1/CA/953:954, 1/CA/1226:1228 | Minor groove platform Not in a motif group | homologous IL_4LFB_038 IL_42622.2 | |
| IL_4V8C_278 | 1/CA/993:997, 1/CA/1044:1045 | Minor groove platform Not in a motif group | geometric IL_6CZR_151 IL_47078.1 | |
| IL_4V8C_279 | 1/CA/1048:1050, 1/CA/1208:1209 | Single bulged U Not in a motif group | homologous IL_4LFB_042 IL_83039.14 | |
| IL_4V8C_280 | 1/CA/1052:1056, 1/CA/1204:1206 | Isolated cWS basepair Not in a motif group | homologous IL_4LFB_044 IL_76319.2 | |
| IL_4V8C_281 | 1/CA/1057:1058, 1/CA/1199:1203 | Minor groove platform Not in a motif group | homologous IL_5J7L_048 IL_93353.1 | |
| IL_4V8C_282 | 1/CA/1060:1061, 1/CA/1195:1197 | Single bulged U Not in a motif group | homologous IL_4LFB_046 IL_83039.14 | |
| IL_4V8C_283 | 1/CA/1061:1063, 1/CA/1193:1195 | No text annotation Not in a motif group | geometric IL_4LFB_047 IL_95997.1 | |
| IL_4V8C_284 | 1/CA/1124:1132, 1/CA/1142:1149 | No text annotation Not in a motif group | ||
| IL_4V8C_285 | 1/CA/1158:1162, 1/CA/1174:1181 | No text annotation Not in a motif group | ||
| IL_4V8C_286 | 1/CA/1247:1253, 1/CA/1284:1290 | No text annotation Not in a motif group | homologous IL_4LFB_051 IL_09129.1 | |
| IL_4V8C_287 | 1/CA/1255:1258, 1/CA/1277:1282 | No text annotation Not in a motif group | homologous IL_4LFB_052 IL_84205.1 | |
| IL_4V8C_288 | 1/CA/1259:1262, 1/CA/1273:1276 | Double sheared Not in a motif group | geometric IL_5J7L_256 IL_09705.9 | |
| IL_4V8C_289 | 1/CA/1303:1308, 1/CA/1329:1334 | No text annotation Not in a motif group | geometric IL_4LFB_055 IL_19954.2 | |
| IL_4V8C_290 | 1/CA/1399:1401, 1/CA/1501:1504 | No text annotation Not in a motif group | geometric IL_4V88_463 IL_36143.3 | |
| IL_4V8C_291 | 1/CA/1401:1404, 1/CA/1497:1501 | No text annotation Not in a motif group | geometric IL_4V88_464 IL_99670.1 | |
| IL_4V8C_292 | 1/CA/1405:1407, 1/CA/1494:1496 | UU cWW Not in a motif group | geometric IL_4ZC7_004 IL_95997.1 | |
| IL_4V8C_293 | 1/CA/1407:1409, 1/CA/1491:1494 | Decoding loop related Not in a motif group | geometric IL_3C3Z_002 IL_64417.1 | |
| IL_4V8C_294 | 1/CA/1412:1414, 1/CA/1486:1488 | No text annotation Not in a motif group | homologous IL_5J7L_061 IL_95997.1 | |
| IL_4V8C_295 | 1/CA/1416:1419, 1/CA/1481:1484 | Double sheared Not in a motif group | homologous IL_5J7L_062 IL_09705.9 | |
| IL_4V8C_296 | 1/CA/1431:1435, 1/CA/1466:1469 | UAA/GAN variation Not in a motif group | geometric IL_4LFB_062 IL_07235.1 | |
| IL_4V8C_297 | 1/CA/1435:1437, 1/CA/1464:1466 | No text annotation Not in a motif group | homologous IL_4LFB_063 IL_95997.1 | |
| IL_4V8C_298 | 1/CA/1440:1447, 1/CA/1459:1461 | No text annotation Not in a motif group | homologous IL_4LFB_064 IL_92788.2 | |
| IL_4V8C_301 | 1/CD/28:29, 1/CD/43:45 | No text annotation Not in a motif group | ||
| IL_4V8C_302 | 1/DA/30:32, 1/DA/552:553 | Single bulged G Not in a motif group | homologous IL_4LFB_001 IL_00225.3 | |
| IL_4V8C_303 | 1/DA/44:45, 1/DA/396:398 | Single bulged A Not in a motif group | homologous IL_4LFB_002 IL_37497.3 | |
| IL_4V8C_304 | 1/DA/47:52, 1/DA/359:361 | No text annotation Not in a motif group | homologous IL_4LFB_003 IL_11178.1 | |
| IL_4V8C_305 | 1/DA/54:56, 1/DA/356:357 | Minor groove platform Not in a motif group | homologous IL_4LFB_004 IL_93353.1 | |
| IL_4V8C_306 | 1/DA/63:66, 1/DA/103:104 | Multiple bulged bases Not in a motif group | homologous IL_5J7L_005 IL_76389.1 | |
| IL_4V8C_307 | 1/DA/67:69, 1/DA/99:102 | No text annotation Not in a motif group | homologous IL_4LFB_006 IL_95997.1 | |
| IL_4V8C_308 | 1/DA/129:131, 1/DA/231:232 | Multiple bulged bases Not in a motif group | homologous IL_4LFB_007 IL_16396.2 | |
| IL_4V8C_309 | 1/DA/132:136, 1/DA/227:230 | No text annotation Not in a motif group | homologous IL_4LFB_008 IL_58764.3 | |
| IL_4V8C_310 | 1/DA/148:153, 1/DA/168:174 | tWH-tWH-tHW-tHW Not in a motif group | homologous IL_4LFB_009 IL_39753.1 | |
| IL_4V8C_311 | 1/DA/185:186B, 1/DA/191E:192 | No text annotation Not in a motif group | ||
| IL_4V8C_312 | 1/DA/242:247, 1/DA/277:284 | Kink-turn with non-sequential stacking Not in a motif group | homologous IL_4LFB_011 IL_45067.2 | |
| IL_4V8C_313 | 1/DA/249:252, 1/DA/274:275 | No text annotation Not in a motif group | homologous IL_5J7L_015 IL_48100.2 | |
| IL_4V8C_314 | 1/DA/292:293, 1/DA/304:308 | C-loop Not in a motif group | homologous IL_4LFB_013 IL_37712.2 | |
| IL_4V8C_315 | 1/DA/367:369, 1/DA/392:393 | Single bulged U Not in a motif group | homologous IL_5J7L_017 IL_83039.14 | |
| IL_4V8C_316 | 1/DA/371:375, 1/DA/389:390 | C-loop Not in a motif group | homologous IL_5J7L_018 IL_75255.1 | |
| IL_4V8C_317 | 1/DA/375:376, 1/DA/387:389 | Single bulged G Not in a motif group | geometric IL_5J7L_019 IL_00225.3 | |
| IL_4V8C_318 | 1/DA/409:416, 1/DA/427:433 | No text annotation Not in a motif group | homologous IL_4LFB_017 IL_28026.1 | |
| IL_4V8C_319 | 1/DA/446:450, 1/DA/483:488 | 6x5 Sarcin-Ricin; G-bulge Not in a motif group | homologous IL_4LFB_018 IL_88269.3 | |
| IL_4V8C_320 | 1/DA/450:455, 1/DA/477:483 | No text annotation Not in a motif group | geometric IL_4LFB_019 IL_11882.1 | |
| IL_4V8C_321 | 1/DA/504:511, 1/DA/540:541 | SSU/LSU pseudoknot Not in a motif group | homologous IL_4LFB_020 IL_15861.7 | |
| IL_4V8C_322 | 1/DA/515:521, 1/DA/528:536 | No text annotation Not in a motif group | geometric IL_4V88_415 IL_55871.1 | |
| IL_4V8C_323 | 1/DA/569:575, 1/DA/880:881 | No text annotation Not in a motif group | homologous IL_4LFB_022 IL_69996.1 | |
| IL_4V8C_324 | 1/DA/580:584, 1/DA/757:761 | tSH-tHW-tHS Not in a motif group | homologous IL_4LFB_023 IL_17136.1 | |
| IL_4V8C_325 | 1/DA/594:596, 1/DA/644:645 | Major groove platform Not in a motif group | homologous IL_4LFB_024 IL_27635.2 | |
| IL_4V8C_326 | 1/DA/597:598, 1/DA/640:643 | Major groove minor groove platform; mini C-loop Not in a motif group | homologous IL_5J7L_029 IL_09061.6 | |
| IL_4V8C_327 | 1/DA/605:612, 1/DA/628:633 | No text annotation Not in a motif group | homologous IL_5J7L_030 IL_78349.1 | |
| IL_4V8C_328 | 1/DA/654:655, 1/DA/751:754 | Major groove platform; stack outside cWW Not in a motif group | homologous IL_4LFB_027 IL_50694.2 | |
| IL_4V8C_329 | 1/DA/657:658, 1/DA/747:749 | Major groove platform Not in a motif group | homologous IL_4LFB_028 IL_27635.2 | |
| IL_4V8C_330 | 1/DA/662:666, 1/DA/740:743 | Tandem non-canonical cWW pairs Not in a motif group | homologous IL_4LFB_029 IL_71110.1 | |
| IL_4V8C_331 | 1/DA/673:678, 1/DA/712:717 | No text annotation Not in a motif group | homologous IL_4LFB_030 IL_04668.1 | |
| IL_4V8C_332 | 1/DA/683:688, 1/DA/699:707 | Kink-turn Not in a motif group | homologous IL_4LFB_031 IL_37722.1 | |
| IL_4V8C_333 | 1/DA/774:778, 1/DA/804:805 | Left turn Not in a motif group | homologous IL_4LFB_032 IL_29346.1 | |
| IL_4V8C_334 | 1/DA/779:783, 1/DA/799:803 | tSH-tHW-tHS Not in a motif group | homologous IL_4LFB_033 IL_17136.1 | |
| IL_4V8C_335 | 1/DA/887:894, 1/DA/905:910 | 8x6 Sarcin-Ricin with inserted Y; G-bulge Not in a motif group | homologous IL_4LFB_034 IL_24606.2 | |
| IL_4V8C_336 | 1/DA/922:923, 1/DA/1393:1395 | Single bulged A Not in a motif group | homologous IL_5J7L_039 IL_37497.3 | |
| IL_4V8C_337 | 1/DA/925:927, 1/DA/1390:1391 | Single bulged G Not in a motif group | homologous IL_4LFB_036 IL_00225.3 | |
| IL_4V8C_338 | 1/DA/933:935, 1/DA/1380:1384 | Minor groove platform Not in a motif group | homologous IL_5J7L_041 IL_47078.1 | |
| IL_4V8C_339 | 1/DA/953:954, 1/DA/1226:1228 | Minor groove platform Not in a motif group | homologous IL_4LFB_038 IL_42622.2 | |
| IL_4V8C_340 | 1/DA/993:997, 1/DA/1044:1045 | Minor groove platform Not in a motif group | homologous IL_4LFB_039 IL_47078.1 | |
| IL_4V8C_341 | 1/DA/1048:1050, 1/DA/1208:1209 | Single bulged U Not in a motif group | homologous IL_4LFB_042 IL_83039.14 | |
| IL_4V8C_342 | 1/DA/1052:1056, 1/DA/1204:1206 | Isolated cWS basepair Not in a motif group | homologous IL_4LFB_044 IL_76319.2 | |
| IL_4V8C_343 | 1/DA/1057:1058, 1/DA/1199:1203 | Minor groove platform Not in a motif group | homologous IL_5J7L_048 IL_93353.1 | |
| IL_4V8C_344 | 1/DA/1060:1061, 1/DA/1195:1197 | Single bulged U Not in a motif group | geometric IL_4LFB_046 IL_83039.14 | |
| IL_4V8C_345 | 1/DA/1061:1063, 1/DA/1193:1195 | No text annotation Not in a motif group | geometric IL_4LFB_047 IL_95997.1 | |
| IL_4V8C_347 | 1/DA/1124:1128, 1/DA/1143:1149 | No text annotation Not in a motif group | homologous IL_4LFB_048 IL_85222.1 | |
| IL_4V8C_348 | 1/DA/1128:1132, 1/DA/1142:1143 | No text annotation Not in a motif group | ||
| IL_4V8C_349 | 1/DA/1247:1253, 1/DA/1284:1290 | No text annotation Not in a motif group | homologous IL_4LFB_051 IL_09129.1 | |
| IL_4V8C_350 | 1/DA/1255:1258, 1/DA/1277:1282 | No text annotation Not in a motif group | homologous IL_4LFB_052 IL_84205.1 | |
| IL_4V8C_351 | 1/DA/1259:1260, 1/DA/1274:1276 | Not an internal loop Not in a motif group | geometric IL_4LFB_053 IL_93353.1 | |
| IL_4V8C_352 | 1/DA/1260:1262, 1/DA/1273:1274 | Minor groove platform Not in a motif group | homologous IL_4LFB_054 IL_93353.1 | |
| IL_4V8C_353 | 1/DA/1303:1308, 1/DA/1329:1334 | No text annotation Not in a motif group | homologous IL_4LFB_055 IL_19954.2 | |
| IL_4V8C_355 | 1/DA/1399:1401, 1/DA/1501:1504 | No text annotation Not in a motif group | geometric IL_4V88_463 IL_36143.3 | |
| IL_4V8C_356 | 1/DA/1401:1404, 1/DA/1497:1501 | No text annotation Not in a motif group | geometric IL_4V88_464 IL_99670.1 | |
| IL_4V8C_357 | 1/DA/1405:1407, 1/DA/1494:1496 | UU cWW Not in a motif group | geometric IL_4ZC7_004 IL_95997.1 | |
| IL_4V8C_358 | 1/DA/1407:1409, 1/DA/1491:1494 | Decoding loop related Not in a motif group | geometric IL_3C3Z_002 IL_64417.1 | |
| IL_4V8C_359 | 1/DA/1412:1414, 1/DA/1486:1488 | No text annotation Not in a motif group | homologous IL_5J7L_061 IL_95997.1 | |
| IL_4V8C_360 | 1/DA/1416:1419, 1/DA/1481:1484 | Double sheared Not in a motif group | homologous IL_5J7L_062 IL_09705.9 | |
| IL_4V8C_361 | 1/DA/1431:1435, 1/DA/1466:1469 | UAA/GAN variation Not in a motif group | geometric IL_4LFB_062 IL_07235.1 | |
| IL_4V8C_362 | 1/DA/1435:1437, 1/DA/1464:1466 | No text annotation Not in a motif group | homologous IL_4LFB_063 IL_95997.1 | |
| IL_4V8C_363 | 1/DA/1440:1447, 1/DA/1459:1461 | Isolated basepair with bulged bases Not in a motif group | homologous IL_6CZR_172 IL_92788.2 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_4V8C_118 | No text annotation | ||
| IL_4V8C_162 | No text annotation | ||
| IL_4V8C_164 | No text annotation | ||
| IL_4V8C_232 | No text annotation | ||
| IL_4V8C_299 | No text annotation | ||
| IL_4V8C_300 | No text annotation | ||
| IL_4V8C_346 | No text annotation | ||
| IL_4V8C_354 | No text annotation | ||
| IL_4V8C_364 | UU cWW | ||
| IL_4V8C_365 | No text annotation | ||
| IL_4V8C_366 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J3_4V8C_001 | 1/AA/683:689, 1/AA/773:775, 1/AA/791:794 | No text annotation Not in a motif group | ||
| J3_4V8C_002 | 1/AA/698:700, 1/AA/732:736, 1/AA/760:763 | No text annotation Not in a motif group | ||
| J3_4V8C_003 | 1/AA/1055:1058, 1/AA/1080:1087, 1/AA/1102:1104 | No text annotation Not in a motif group | ||
| J3_4V8C_004 | 1/AA/1298:1303, 1/AA/1625:1627, 1/AA/1639:1642 | No text annotation Not in a motif group | homologous J3_7RQB_007 NA | |
| J3_4V8C_005 | 1/AA/1306:1309, 1/AA/1605:1611, 1/AA/1620:1622 | No text annotation Not in a motif group | homologous J3_7RQB_008 NA | |
| J3_4V8C_006 | 1/AA/2091:2093, 1/AA/2196:2205, 1/AA/2219:2228 | No text annotation Not in a motif group | homologous J3_7RQB_010 NA | |
| J3_4V8C_007 | 1/AA/2295:2297, 1/AA/2321:2323, 1/AA/2332:2337 | No text annotation Not in a motif group | ||
| J3_4V8C_008 | 1/AA/2517:2520, 1/AA/2545:2547, 1/AA/2561:2567 | No text annotation Not in a motif group | homologous J3_7RQB_012 NA | |
| J3_4V8C_009 | 1/AA/2789:2791, 1/AA/2805:2811, 1/AA/2889:2894 | No text annotation Not in a motif group | homologous J3_7RQB_013 NA | |
| J3_4V8C_010 | 1/BA/683:689, 1/BA/773:775, 1/BA/791:794 | No text annotation Not in a motif group | homologous J3_7RQB_004 NA | |
| J3_4V8C_011 | 1/BA/698:700, 1/BA/732:736, 1/BA/760:763 | No text annotation Not in a motif group | ||
| J3_4V8C_012 | 1/BA/1055:1058, 1/BA/1080:1087, 1/BA/1102:1104 | No text annotation Not in a motif group | ||
| J3_4V8C_013 | 1/BA/1298:1303, 1/BA/1625:1627, 1/BA/1639:1642 | No text annotation Not in a motif group | homologous J3_7RQB_007 NA | |
| J3_4V8C_014 | 1/BA/1306:1309, 1/BA/1605:1611, 1/BA/1620:1622 | No text annotation Not in a motif group | homologous J3_7RQB_008 NA | |
| J3_4V8C_015 | 1/BA/2091:2093, 1/BA/2196:2205, 1/BA/2219:2228 | No text annotation Not in a motif group | homologous J3_7RQB_010 NA | |
| J3_4V8C_016 | 1/BA/2295:2297, 1/BA/2321:2323, 1/BA/2332:2337 | No text annotation Not in a motif group | homologous J3_7RQB_011 NA | |
| J3_4V8C_017 | 1/BA/2517:2520, 1/BA/2545:2547, 1/BA/2561:2567 | No text annotation Not in a motif group | ||
| J3_4V8C_018 | 1/BA/2789:2791, 1/BA/2805:2811, 1/BA/2889:2894 | No text annotation Not in a motif group | homologous J3_7A0S_012 NA | |
| J3_4V8C_019 | 1/CA/826:829, 1/CA/857:861, 1/CA/868:874 | No text annotation Not in a motif group | homologous J3_4LFB_001 NA | |
| J3_4V8C_020 | 1/CA/936:939, 1/CA/1344:1350, 1/CA/1372:1379 | No text annotation Not in a motif group | homologous J3_4LFB_002 NA | |
| J3_4V8C_021 | 1/CA/943:946, 1/CA/1235:1237, 1/CA/1337:1340 | No text annotation Not in a motif group | homologous J3_4LFB_003 NA | |
| J3_4V8C_022 | 1/CA/955:962, 1/CA/973:984, 1/CA/1221:1225 | No text annotation Not in a motif group | ||
| J3_4V8C_023 | 1/CA/990:993, 1/CA/1045:1047, 1/CA/1210:1215 | No text annotation Not in a motif group | homologous J3_4LFB_005 NA | |
| J3_4V8C_024 | 1/CA/1002:1006, 1/CA/1023:1028, 1/CA/1033:1038 | No text annotation Not in a motif group | ||
| J3_4V8C_025 | 1/CA/1063:1068, 1/CA/1107:1113, 1/CA/1187:1193 | No text annotation Not in a motif group | ||
| J3_4V8C_026 | 1/CA/1116:1118, 1/CA/1155:1158, 1/CA/1181:1184 | No text annotation Not in a motif group | homologous J3_4LFB_008 NA | |
| J3_4V8C_027 | 1/CA/1237:1241, 1/CA/1296:1303, 1/CA/1334:1337 | No text annotation Not in a motif group | ||
| J3_4V8C_028 | 1/DA/826:829, 1/DA/857:861, 1/DA/868:874 | No text annotation Not in a motif group | homologous J3_4LFB_001 NA | |
| J3_4V8C_029 | 1/DA/936:939, 1/DA/1344:1350, 1/DA/1372:1379 | No text annotation Not in a motif group | homologous J3_4LFB_002 NA | |
| J3_4V8C_030 | 1/DA/943:946, 1/DA/1235:1237, 1/DA/1337:1340 | No text annotation Not in a motif group | homologous J3_4LFB_003 NA | |
| J3_4V8C_031 | 1/DA/955:962, 1/DA/973:984, 1/DA/1221:1225 | No text annotation Not in a motif group | ||
| J3_4V8C_032 | 1/DA/990:993, 1/DA/1045:1047, 1/DA/1210:1215 | No text annotation Not in a motif group | ||
| J3_4V8C_033 | 1/DA/1002:1006, 1/DA/1023:1028, 1/DA/1033:1038 | No text annotation Not in a motif group | ||
| J3_4V8C_034 | 1/DA/1063:1068, 1/DA/1107:1113, 1/DA/1187:1193 | No text annotation Not in a motif group | ||
| J3_4V8C_035 | 1/DA/1116:1118, 1/DA/1155:1161, 1/DA/1175:1184 | No text annotation Not in a motif group | ||
| J3_4V8C_036 | 1/DA/1237:1241, 1/DA/1296:1303, 1/DA/1334:1337 | No text annotation Not in a motif group |
Problematic loops
No problematic loops
Coloring options: