Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
HL_5HAU_0011/1A/57:66No text annotation
Not in a motif group
homologous
HL_7RQB_001
HL_99167.1
HL_5HAU_0021/1A/85:93No text annotation
Not in a motif group
homologous
HL_7RQB_002
HL_96598.1
HL_5HAU_0031/1A/120:125No text annotation
Not in a motif group
homologous
HL_7RQB_003
HL_75407.1
HL_5HAU_0041/1A/135:140No text annotation
Not in a motif group
homologous
HL_7RQB_004
HL_79921.2
HL_5HAU_0051/1A/182:189No text annotation
Not in a motif group
homologous
HL_7RQB_006
HL_06192.2
HL_5HAU_0061/1A/213:218No text annotation
Not in a motif group
homologous
HL_7RQB_007
HL_02862.2
HL_5HAU_0071/1A/234:240No text annotation
Not in a motif group
homologous
HL_7RQB_008
HL_67216.7
HL_5HAU_0081/1A/268:274No text annotation
Not in a motif group
geometric
HL_5J7L_018
HL_34168.2
HL_5HAU_0091/1A/328:335No text annotation
Not in a motif group
homologous
HL_7RQB_010
HL_89380.2
HL_5HAU_0101/1A/342:346No text annotation
Not in a motif group
homologous
HL_7RQB_011
HL_75407.1
HL_5HAU_0111/1A/350:358No text annotation
Not in a motif group
homologous
HL_7RQB_012
HL_08002.8
HL_5HAU_0121/1A/408:418No text annotation
Not in a motif group
homologous
HL_7RQB_013
HL_91503.4
HL_5HAU_0131/1A/436:443No text annotation
Not in a motif group
homologous
HL_7RQB_014
HL_96598.1
HL_5HAU_0141/1A/487:492No text annotation
Not in a motif group
homologous
HL_7RQB_015
HL_42097.1
HL_5HAU_0151/1A/512:517No text annotation
Not in a motif group
homologous
HL_7RQB_016
HL_42097.1
HL_5HAU_0171/1A/588:597No text annotation
Not in a motif group
homologous
HL_7RQB_018
HL_89380.2
HL_5HAU_0181/1A/634:640No text annotation
Not in a motif group
homologous
HL_7RQB_019
HL_32369.1
HL_5HAU_0191/1A/653:658No text annotation
Not in a motif group
homologous
HL_7RQB_020
HL_42097.1
HL_5HAU_0201/1A/665:671GNRA with one bulged base
Not in a motif group
homologous
HL_4WF9_021
HL_42097.1
HL_5HAU_0211/1A/758:765No text annotation
Not in a motif group
homologous
HL_7RQB_022
HL_84085.2
HL_5HAU_0221/1A/790:799No text annotation
Not in a motif group
homologous
HL_7RQB_023
HL_39334.6
HL_5HAU_0231/1A/825:831No text annotation
Not in a motif group
homologous
HL_5J7L_156
HL_74322.1
HL_5HAU_0241/1A/872:877No text annotation
Not in a motif group
homologous
HL_7RQB_025
HL_64365.1
HL_5HAU_0251/1A/930:937No text annotation
Not in a motif group
homologous
HL_7RQB_026
HL_27930.1
HL_5HAU_0261/1A/999:1006No text annotation
Not in a motif group
homologous
HL_7RQB_027
HL_42097.1
HL_5HAU_0271/1A/1023:1030No text annotation
Not in a motif group
homologous
HL_7RQB_028
HL_64430.2
HL_5HAU_0301/1A/1216:1222No text annotation
Not in a motif group
homologous
HL_7RQB_031
HL_94651.3
HL_5HAU_0311/1A/1267:1272No text annotation
Not in a motif group
homologous
HL_7RQB_032
HL_42097.1
HL_5HAU_0321/1A/1326:1334No text annotation
Not in a motif group
homologous
HL_7RQB_033
HL_89380.2
HL_5HAU_0331/1A/1369:1375No text annotation
Not in a motif group
homologous
HL_7RQB_034
HL_46680.1
HL_5HAU_0341/1A/1408:1413No text annotation
Not in a motif group
homologous
HL_7RQB_035
HL_87030.2
HL_5HAU_0351/1A/1434:1443No text annotation
Not in a motif group
homologous
HL_7RQB_036
HL_69023.2
HL_5HAU_0361/1A/1498:1505No text annotation
Not in a motif group
homologous
HL_7RQB_037
HL_32426.1
HL_5HAU_0371/1A/1537:1543No text annotation
Not in a motif group
homologous
HL_7RQB_038
HL_46680.1
HL_5HAU_0381/1A/1611:1614No text annotation
Not in a motif group
homologous
HL_7RQB_039
HL_38927.2
HL_5HAU_0391/1A/1657:1664No text annotation
Not in a motif group
homologous
HL_7RQB_040
HL_64430.2
HL_5HAU_0401/1A/1676:1681No text annotation
Not in a motif group
homologous
HL_7RQB_041
HL_01057.1
HL_5HAU_0411/1A/1737:1742No text annotation
Not in a motif group
geometric
HL_7RQB_042
HL_03562.2
HL_5HAU_0421/1A/1764:1770No text annotation
Not in a motif group
homologous
HL_7RQB_043
HL_43656.2
HL_5HAU_0431/1A/1782:1786No text annotation
Not in a motif group
homologous
HL_7RQB_044
HL_76539.2
HL_5HAU_0441/1A/1807:1817No text annotation
Not in a motif group
homologous
HL_5J7L_178
HL_43613.5
HL_5HAU_0451/1A/1836:1841No text annotation
Not in a motif group
homologous
HL_7RQB_046
HL_42097.1
HL_5HAU_0461/1A/1894:1899No text annotation
Not in a motif group
homologous
HL_7RQB_047
HL_42097.1
HL_5HAU_0471/1A/1931:1941No text annotation
Not in a motif group
geometric
HL_5TBW_049
HL_71924.2
HL_5HAU_0481/1A/1970:1978No text annotation
Not in a motif group
homologous
HL_7RQB_049
HL_51824.1
HL_5HAU_0491/1A/2048:2057No text annotation
Not in a motif group
homologous
HL_7RQB_050
HL_90642.6
HL_5HAU_0511/1A/2225:2230No text annotation
Not in a motif group
homologous
HL_7RQB_052
HL_98426.1
HL_5HAU_0521/1A/2259:2267No text annotation
Not in a motif group
homologous
HL_7RQB_053
NA
HL_5HAU_0531/1A/2275:2287No text annotation
Not in a motif group
homologous
HL_7RQB_054
HL_19870.6
HL_5HAU_0541/1A/2314:2324No text annotation
Not in a motif group
homologous
HL_7RQB_055
HL_11805.3
HL_5HAU_0551/1A/2335:2342No text annotation
Not in a motif group
homologous
HL_7RQB_056
HL_12078.2
HL_5HAU_0561/1A/2366:2373No text annotation
Not in a motif group
homologous
HL_7RQB_057
HL_09136.1
HL_5HAU_0571/1A/2385:2390No text annotation
Not in a motif group
homologous
HL_7RQB_058
HL_42097.1
HL_5HAU_0581/1A/2415:2424No text annotation
Not in a motif group
homologous
HL_7RQB_059
HL_30784.2
HL_5HAU_0591/1A/2482:2490No text annotation
Not in a motif group
homologous
HL_7RQB_060
HL_06192.2
HL_5HAU_0601/1A/2539:2546No text annotation
Not in a motif group
homologous
HL_7RQB_061
HL_88526.2
HL_5HAU_0611/1A/2562:2568No text annotation
Not in a motif group
homologous
HL_4WF9_058
HL_43656.2
HL_5HAU_0621/1A/2605:2610No text annotation
Not in a motif group
homologous
HL_7RQB_063
HL_42097.1
HL_5HAU_0631/1A/2669:2674No text annotation
Not in a motif group
geometric
HL_7RQB_064
HL_42097.1
HL_5HAU_0641/1A/2712:2717No text annotation
Not in a motif group
homologous
HL_7RQB_065
HL_53171.2
HL_5HAU_0651/1A/2757:2771No text annotation
Not in a motif group
homologous
HL_7RQB_066
HL_56677.7
HL_5HAU_0671/1A/2828:2836No text annotation
Not in a motif group
homologous
HL_7RQB_068
HL_27930.1
HL_5HAU_0681/1A/2865:2870No text annotation
Not in a motif group
homologous
HL_7RQB_069
HL_42097.1
HL_5HAU_0691/1B/38:44No text annotation
Not in a motif group
homologous
HL_7RQB_070
HL_87939.1
HL_5HAU_0701/1B/86:91No text annotation
Not in a motif group
homologous
HL_7RQB_071
HL_42097.1
HL_5HAU_0711/1a/13:23No text annotation
Not in a motif group
homologous
HL_4LFB_001
HL_89881.2
HL_5HAU_0731/1a/153:158No text annotation
Not in a motif group
HL_5HAU_0741/1a/187:192No text annotation
Not in a motif group
homologous
HL_6CZR_075
HL_10278.1
HL_5HAU_0751/1a/207:213No text annotation
Not in a motif group
homologous
HL_6CZR_076
HL_34168.2
HL_5HAU_0761/1a/255:263No text annotation
Not in a motif group
homologous
HL_4LFB_006
HL_69023.2
HL_5HAU_0771/1a/292:297GNRA
Not in a motif group
homologous
HL_4LFB_007
HL_42097.1
HL_5HAU_0781/1a/316:329No text annotation
Not in a motif group
homologous
HL_4LFB_008
HL_81205.2
HL_5HAU_0801/1a/375:380GNRA
Not in a motif group
homologous
HL_4LFB_010
HL_42097.1
HL_5HAU_0811/1a/415:420UNCG
Not in a motif group
homologous
HL_4LFB_011
HL_03562.2
HL_5HAU_0821/1a/453:459No text annotation
Not in a motif group
homologous
HL_4LFB_012
HL_43656.2
HL_5HAU_0831/1a/506:511No text annotation
Not in a motif group
geometric
HL_5J7L_143
HL_75407.1
HL_5HAU_0841/1a/601:607No text annotation
Not in a motif group
homologous
HL_4LFB_014
HL_26881.1
HL_5HAU_0851/1a/673:682No text annotation
Not in a motif group
homologous
HL_5J7L_015
HL_12326.1
HL_5HAU_0861/1a/710:715Other HL
Not in a motif group
homologous
HL_4LFB_016
HL_87030.2
HL_5HAU_0871/1a/770:780No text annotation
Not in a motif group
homologous
HL_4LFB_017
HL_12326.1
HL_5HAU_0881/1a/822:826No text annotation
Not in a motif group
homologous
HL_4LFB_018
HL_38927.2
HL_5HAU_0891/1a/840:845GNRA
Not in a motif group
homologous
HL_4LFB_019
HL_42097.1
HL_5HAU_0901/1a/875:880GNRA
Not in a motif group
homologous
HL_4LFB_020
HL_42097.1
HL_5HAU_0911/1a/941:950No text annotation
Not in a motif group
homologous
HL_4LFB_021
NA
HL_5HAU_0921/1a/991:996GNRA
Not in a motif group
homologous
HL_4LFB_022
HL_42097.1
HL_5HAU_0941/1a/1059:1064GNRA
Not in a motif group
homologous
HL_5J7L_023
HL_42097.1
HL_5HAU_0951/1a/1072:1079No text annotation
Not in a motif group
homologous
HL_4LFB_025
HL_71554.2
HL_5HAU_0961/1a/1117:1123No text annotation
Not in a motif group
homologous
HL_6CZR_097
NA
HL_5HAU_0971/1a/1148:1153GNRA
Not in a motif group
homologous
HL_4LFB_027
HL_42097.1
HL_5HAU_0981/1a/1247:1252Other HL
Not in a motif group
homologous
HL_4LFB_028
HL_42097.1
HL_5HAU_0991/1a/1296:1305No text annotation
Not in a motif group
homologous
HL_4LFB_029
HL_89380.2
HL_5HAU_1001/1a/1338:1349No text annotation
Not in a motif group
HL_5HAU_1011/1a/1430:1435No text annotation
Not in a motif group
homologous
HL_6CZR_102
HL_49722.1
HL_5HAU_1021/1a/1493:1498No text annotation
Not in a motif group
homologous
HL_4LFB_032
NA
HL_5HAU_1031/1w/13:22No text annotation
Not in a motif group
homologous
HL_6CFJ_106
HL_25462.2
HL_5HAU_1041/1w/31:39No text annotation
Not in a motif group
homologous
HL_6CFJ_107
NA
HL_5HAU_1051/1w/53:61No text annotation
Not in a motif group
homologous
HL_6CFJ_108
NA
HL_5HAU_1061/2A/57:66No text annotation
Not in a motif group
homologous
HL_7RQB_001
HL_99167.1
HL_5HAU_1071/2A/85:93No text annotation
Not in a motif group
homologous
HL_7RQB_002
HL_96598.1
HL_5HAU_1081/2A/120:125No text annotation
Not in a motif group
homologous
HL_5J7L_136
HL_75407.1
HL_5HAU_1091/2A/135:140No text annotation
Not in a motif group
homologous
HL_7RQB_004
HL_79921.2
HL_5HAU_1111/2A/182:189No text annotation
Not in a motif group
geometric
HL_7RQB_006
HL_06192.2
HL_5HAU_1121/2A/213:218No text annotation
Not in a motif group
homologous
HL_7RQB_007
HL_02862.2
HL_5HAU_1131/2A/234:240No text annotation
Not in a motif group
homologous
HL_7RQB_008
HL_67216.7
HL_5HAU_1141/2A/268:274No text annotation
Not in a motif group
geometric
HL_5J7L_018
HL_34168.2
HL_5HAU_1151/2A/328:335No text annotation
Not in a motif group
homologous
HL_7RQB_010
HL_89380.2
HL_5HAU_1161/2A/342:346No text annotation
Not in a motif group
homologous
HL_5J7L_143
HL_75407.1
HL_5HAU_1171/2A/350:358No text annotation
Not in a motif group
homologous
HL_7RQB_012
HL_08002.8
HL_5HAU_1181/2A/408:418No text annotation
Not in a motif group
homologous
HL_7RQB_013
HL_91503.4
HL_5HAU_1191/2A/436:443No text annotation
Not in a motif group
homologous
HL_7RQB_014
HL_96598.1
HL_5HAU_1201/2A/487:492No text annotation
Not in a motif group
homologous
HL_7RQB_015
HL_42097.1
HL_5HAU_1211/2A/512:517No text annotation
Not in a motif group
homologous
HL_7RQB_016
HL_42097.1
HL_5HAU_1231/2A/588:597No text annotation
Not in a motif group
geometric
HL_7RQB_018
HL_89380.2
HL_5HAU_1241/2A/634:640No text annotation
Not in a motif group
homologous
HL_7RQB_019
HL_32369.1
HL_5HAU_1251/2A/653:658No text annotation
Not in a motif group
homologous
HL_7RQB_020
HL_42097.1
HL_5HAU_1261/2A/665:671No text annotation
Not in a motif group
homologous
HL_7RQB_021
HL_42097.1
HL_5HAU_1281/2A/758:765No text annotation
Not in a motif group
homologous
HL_7RQB_022
HL_84085.2
HL_5HAU_1291/2A/790:799No text annotation
Not in a motif group
homologous
HL_7RQB_023
HL_39334.6
HL_5HAU_1301/2A/825:831No text annotation
Not in a motif group
homologous
HL_7RQB_024
HL_74322.1
HL_5HAU_1311/2A/872:877No text annotation
Not in a motif group
homologous
HL_7RQB_025
HL_64365.1
HL_5HAU_1321/2A/930:937No text annotation
Not in a motif group
homologous
HL_7RQB_026
HL_27930.1
HL_5HAU_1331/2A/999:1006No text annotation
Not in a motif group
homologous
HL_7RQB_027
HL_42097.1
HL_5HAU_1341/2A/1023:1030No text annotation
Not in a motif group
homologous
HL_7RQB_028
HL_64430.2
HL_5HAU_1381/2A/1267:1272No text annotation
Not in a motif group
homologous
HL_7RQB_032
HL_42097.1
HL_5HAU_1391/2A/1326:1334No text annotation
Not in a motif group
homologous
HL_7RQB_033
HL_89380.2
HL_5HAU_1401/2A/1369:1375No text annotation
Not in a motif group
homologous
HL_7RQB_034
HL_46680.1
HL_5HAU_1411/2A/1408:1413Other HL
Not in a motif group
homologous
HL_5J7L_167
HL_87030.2
HL_5HAU_1421/2A/1434:1443No text annotation
Not in a motif group
homologous
HL_7RQB_036
HL_69023.2
HL_5HAU_1431/2A/1498:1505No text annotation
Not in a motif group
homologous
HL_7RQB_037
HL_32426.1
HL_5HAU_1441/2A/1537:1543No text annotation
Not in a motif group
homologous
HL_7RQB_038
HL_46680.1
HL_5HAU_1461/2A/1611:1614No text annotation
Not in a motif group
homologous
HL_7A0S_039
HL_38927.2
HL_5HAU_1471/2A/1657:1664No text annotation
Not in a motif group
homologous
HL_7RQB_040
HL_64430.2
HL_5HAU_1481/2A/1676:1681No text annotation
Not in a motif group
homologous
HL_7RQB_041
HL_01057.1
HL_5HAU_1491/2A/1737:1742No text annotation
Not in a motif group
homologous
HL_7RQB_042
HL_03562.2
HL_5HAU_1501/2A/1764:1770No text annotation
Not in a motif group
homologous
HL_7RQB_043
HL_43656.2
HL_5HAU_1511/2A/1782:1786No text annotation
Not in a motif group
homologous
HL_7RQB_044
HL_76539.2
HL_5HAU_1521/2A/1807:1817No text annotation
Not in a motif group
homologous
HL_7RQB_045
HL_43613.5
HL_5HAU_1531/2A/1836:1841No text annotation
Not in a motif group
homologous
HL_7RQB_046
HL_42097.1
HL_5HAU_1541/2A/1894:1899No text annotation
Not in a motif group
homologous
HL_7RQB_047
HL_42097.1
HL_5HAU_1551/2A/1931:1941No text annotation
Not in a motif group
geometric
HL_5TBW_049
HL_71924.2
HL_5HAU_1561/2A/1970:1978No text annotation
Not in a motif group
homologous
HL_7RQB_049
HL_51824.1
HL_5HAU_1571/2A/2048:2057No text annotation
Not in a motif group
homologous
HL_7RQB_050
HL_90642.6
HL_5HAU_1591/2A/2225:2230No text annotation
Not in a motif group
homologous
HL_7RQB_052
HL_98426.1
HL_5HAU_1601/2A/2259:2267No text annotation
Not in a motif group
homologous
HL_7RQB_053
NA
HL_5HAU_1611/2A/2275:2287No text annotation
Not in a motif group
homologous
HL_7RQB_054
HL_19870.6
HL_5HAU_1621/2A/2314:2324No text annotation
Not in a motif group
homologous
HL_7RQB_055
HL_11805.3
HL_5HAU_1631/2A/2335:2342No text annotation
Not in a motif group
homologous
HL_7RQB_056
HL_12078.2
HL_5HAU_1641/2A/2366:2373No text annotation
Not in a motif group
homologous
HL_7RQB_057
HL_09136.1
HL_5HAU_1651/2A/2385:2390No text annotation
Not in a motif group
homologous
HL_7RQB_058
HL_42097.1
HL_5HAU_1661/2A/2415:2424No text annotation
Not in a motif group
homologous
HL_7RQB_059
HL_30784.2
HL_5HAU_1671/2A/2482:2490No text annotation
Not in a motif group
homologous
HL_7RQB_060
HL_06192.2
HL_5HAU_1681/2A/2539:2546No text annotation
Not in a motif group
homologous
HL_7RQB_061
HL_88526.2
HL_5HAU_1691/2A/2562:2568No text annotation
Not in a motif group
homologous
HL_4WF9_058
HL_43656.2
HL_5HAU_1701/2A/2605:2610No text annotation
Not in a motif group
homologous
HL_7RQB_063
HL_42097.1
HL_5HAU_1711/2A/2669:2674No text annotation
Not in a motif group
geometric
HL_7RQB_064
HL_42097.1
HL_5HAU_1721/2A/2712:2717No text annotation
Not in a motif group
homologous
HL_7RQB_065
HL_53171.2
HL_5HAU_1731/2A/2757:2771No text annotation
Not in a motif group
homologous
HL_7RQB_066
HL_56677.7
HL_5HAU_1751/2A/2828:2836No text annotation
Not in a motif group
homologous
HL_7RQB_068
HL_27930.1
HL_5HAU_1761/2A/2865:2870No text annotation
Not in a motif group
homologous
HL_7RQB_069
HL_42097.1
HL_5HAU_1771/2B/38:44No text annotation
Not in a motif group
homologous
HL_7RQB_070
HL_87939.1
HL_5HAU_1781/2B/86:91No text annotation
Not in a motif group
homologous
HL_7RQB_071
HL_42097.1
HL_5HAU_1791/2a/13:23No text annotation
Not in a motif group
homologous
HL_4LFB_001
HL_89881.2
HL_5HAU_1811/2a/153:158GNRA
Not in a motif group
homologous
HL_4LFB_003
HL_42097.1
HL_5HAU_1821/2a/187:192No text annotation
Not in a motif group
homologous
HL_4LFB_004
HL_10278.1
HL_5HAU_1831/2a/208:212No text annotation
Not in a motif group
homologous
HL_4LFB_005
HL_56691.2
HL_5HAU_1841/2a/255:263No text annotation
Not in a motif group
homologous
HL_4LFB_006
HL_69023.2
HL_5HAU_1851/2a/292:297GNRA
Not in a motif group
homologous
HL_4LFB_007
HL_42097.1
HL_5HAU_1861/2a/316:329No text annotation
Not in a motif group
homologous
HL_4LFB_008
HL_81205.2
HL_5HAU_1871/2a/338:343UNCG
Not in a motif group
homologous
HL_4LFB_009
HL_03562.2
HL_5HAU_1881/2a/375:380GNRA
Not in a motif group
homologous
HL_5J7L_010
HL_42097.1
HL_5HAU_1891/2a/415:420UNCG
Not in a motif group
homologous
HL_4LFB_011
HL_03562.2
HL_5HAU_1901/2a/453:459No text annotation
Not in a motif group
homologous
HL_4LFB_012
HL_43656.2
HL_5HAU_1911/2a/506:511No text annotation
Not in a motif group
geometric
HL_4WF9_003
HL_75407.1
HL_5HAU_1921/2a/601:607No text annotation
Not in a motif group
homologous
HL_4LFB_014
HL_26881.1
HL_5HAU_1931/2a/673:682No text annotation
Not in a motif group
homologous
HL_4LFB_015
HL_12326.1
HL_5HAU_1941/2a/710:715Other HL
Not in a motif group
homologous
HL_4LFB_016
HL_87030.2
HL_5HAU_1951/2a/770:780No text annotation
Not in a motif group
homologous
HL_4LFB_017
HL_12326.1
HL_5HAU_1961/2a/822:826No text annotation
Not in a motif group
homologous
HL_6CZR_089
HL_53837.1
HL_5HAU_1971/2a/840:845GNRA
Not in a motif group
homologous
HL_4LFB_019
HL_42097.1
HL_5HAU_1981/2a/875:880GNRA
Not in a motif group
homologous
HL_4LFB_020
HL_42097.1
HL_5HAU_1991/2a/941:950No text annotation
Not in a motif group
homologous
HL_4LFB_021
NA
HL_5HAU_2001/2a/991:996GNRA
Not in a motif group
homologous
HL_4LFB_022
HL_42097.1
HL_5HAU_2021/2a/1059:1064GNRA
Not in a motif group
homologous
HL_5J7L_023
HL_42097.1
HL_5HAU_2031/2a/1072:1079No text annotation
Not in a motif group
homologous
HL_4LFB_025
HL_71554.2
HL_5HAU_2041/2a/1117:1123No text annotation
Not in a motif group
homologous
HL_6CZR_097
NA
HL_5HAU_2051/2a/1148:1153GNRA
Not in a motif group
homologous
HL_4LFB_027
HL_42097.1
HL_5HAU_2061/2a/1247:1252Other HL
Not in a motif group
homologous
HL_4LFB_028
HL_42097.1
HL_5HAU_2071/2a/1296:1305No text annotation
Not in a motif group
homologous
HL_4LFB_029
HL_89380.2
HL_5HAU_2081/2a/1338:1349No text annotation
Not in a motif group
HL_5HAU_2091/2a/1430:1435No text annotation
Not in a motif group
homologous
HL_6CZR_102
HL_49722.1
HL_5HAU_2101/2a/1493:1498No text annotation
Not in a motif group
homologous
HL_4LFB_032
NA
HL_5HAU_2111/2w/13:22No text annotation
Not in a motif group
homologous
HL_6CFJ_106
HL_25462.2
HL_5HAU_2121/2w/31:39No text annotation
Not in a motif group
homologous
HL_6CFJ_107
NA
HL_5HAU_2131/2w/53:61No text annotation
Not in a motif group
homologous
HL_5L4O_003
NA

Problematic loops

#loop idProblemSequence
HL_5HAU_016No text annotation
HL_5HAU_028No text annotation
HL_5HAU_029No text annotation
HL_5HAU_050UNCG
HL_5HAU_066No text annotation
HL_5HAU_072No text annotation
HL_5HAU_079No text annotation
HL_5HAU_093No text annotation
HL_5HAU_110No text annotation
HL_5HAU_122No text annotation
HL_5HAU_127No text annotation
HL_5HAU_135No text annotation
HL_5HAU_136No text annotation
HL_5HAU_137No text annotation
HL_5HAU_145No text annotation
HL_5HAU_158No text annotation
HL_5HAU_174No text annotation
HL_5HAU_180No text annotation
HL_5HAU_201No text annotation

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
IL_5HAU_0011/1A/23:29,
1/1A/534:540
Triple sheared with non-canonical cWW
Not in a motif group
homologous
IL_7RQB_001
IL_66414.6
IL_5HAU_0021/1A/35:36,
1/1A/467:469
Single bulged A
Not in a motif group
homologous
IL_7RQB_002
IL_37497.2
IL_5HAU_0031/1A/41:43,
1/1A/459:462
Major groove platform with extra cWW
Not in a motif group
geometric
IL_4V9F_003
IL_18471.2
IL_5HAU_0041/1A/79:83,
1/1A/95:102
Kink-turn
Not in a motif group
homologous
IL_7RQB_004
IL_45067.2
IL_5HAU_0051/1A/171:172,
1/1A/200:202
Single stack bend
Not in a motif group
homologous
IL_7RQB_005
IL_76488.2
IL_5HAU_0061/1A/176:182,
1/1A/189:196
8x7 Sarcin-Ricin; G-bulge
Not in a motif group
geometric
IL_7RQB_006
IL_04346.7
IL_5HAU_0071/1A/227:233,
1/1A/241:246
7x6 Sarcin-Ricin; G-bulge
Not in a motif group
homologous
IL_7RQB_007
IL_76042.2
IL_5HAU_0081/1A/290:291,
1/1A/391:393
Major groove platform
Not in a motif group
homologous
IL_7RQB_009
IL_27635.1
IL_5HAU_0101/1A/303:307,
1/1A/380:383
tSH-tHW
Not in a motif group
homologous
IL_7RQB_011
IL_04059.1
IL_5HAU_0111/1A/311:313,
1/1A/373:376
Isolated tHS basepair with bulges
Not in a motif group
homologous
IL_7RQB_012
IL_38958.7
IL_5HAU_0121/1A/316:318,
1/1A/366:370
No text annotation
Not in a motif group
homologous
IL_7RQB_013
IL_69440.1
IL_5HAU_0131/1A/506:509,
1/1A/520:533
No text annotation
Not in a motif group
homologous
IL_7RQB_014
IL_60992.6
IL_5HAU_0141/1A/586:588,
1/1A/597:599
No text annotation
Not in a motif group
geometric
IL_7RQB_015
IL_95997.1
IL_5HAU_0151/1A/628:632,
1/1A/642:646
AAA cross-strand stack
Not in a motif group
homologous
IL_7RQB_016
IL_17136.1
IL_5HAU_0161/1A/718:720,
1/1A/852:854
No text annotation
Not in a motif group
geometric
IL_7RQB_017
IL_95997.1
IL_5HAU_0171/1A/720:724,
1/1A/845:852
No text annotation
Not in a motif group
homologous
IL_7RQB_018
IL_17470.6
IL_5HAU_0181/1A/743:744,
1/1A/809:811
Single bulged A
Not in a motif group
geometric
IL_7RQB_019
IL_37497.2
IL_5HAU_0191/1A/748:749,
1/1A/774:776
Single bulged G
Not in a motif group
homologous
IL_7RQB_020
IL_00225.2
IL_5HAU_0201/1A/749:753,
1/1A/770:774
Triple sheared
Not in a motif group
geometric
IL_7RQB_021
IL_56467.8
IL_5HAU_0211/1A/784:787,
1/1A/802:804
Major groove platform with extra cWW
Not in a motif group
homologous
IL_7RQB_022
IL_05564.2
IL_5HAU_0221/1A/821:823,
1/1A/833:837
Multiple bulged bases
Not in a motif group
geometric
IL_7RQB_023
IL_90991.6
IL_5HAU_0231/1A/883:884,
1/1A/984:986
Single stack bend
Not in a motif group
homologous
IL_7RQB_024
IL_92001.1
IL_5HAU_0241/1A/890:892,
1/1A/975:978
Intercalated cWW
Not in a motif group
geometric
IL_7RQB_025
IL_52767.2
IL_5HAU_0251/1A/892:896,
1/1A/972:975
No text annotation
Not in a motif group
homologous
IL_7RQB_026
IL_94165.1
IL_5HAU_0261/1A/903:908,
1/1A/960:965
5x5 Sarcin-Ricin with intercalated A; G-bulge
Not in a motif group
geometric
IL_7A0S_027
IL_81631.1
IL_5HAU_0271/1A/908:909,
1/1A/958:960
Minor groove platform
Not in a motif group
homologous
IL_7RQB_028
IL_42622.2
IL_5HAU_0281/1A/910:914,
1/1A/954:957
C-loop
Not in a motif group
homologous
IL_7RQB_029
IL_02509.1
IL_5HAU_0291/1A/916:918,
1/1A/950:952
Isolated cWS basepair
Not in a motif group
homologous
IL_7RQB_030
IL_52767.2
IL_5HAU_0301/1A/921:923,
1/1A/944:947
Minor groove platform with extra cWW
Not in a motif group
geometric
IL_7RQB_031
IL_46796.1
IL_5HAU_0311/1A/923:925,
1/1A/943:944
Minor groove platform
Not in a motif group
homologous
IL_7RQB_032
IL_93353.1
IL_5HAU_0321/1A/926:927,
1/1A/940:942
Single bulged A
Not in a motif group
homologous
IL_7RQB_033
IL_37497.2
IL_5HAU_0331/1A/996:998,
1/1A/1007:1009
No text annotation
Not in a motif group
homologous
IL_7RQB_034
IL_95997.1
IL_5HAU_0341/1A/1039:1041,
1/1A/1204:1205
Single bulged C
Not in a motif group
homologous
IL_7RQB_035
IL_61258.12
IL_5HAU_0351/1A/1043:1047,
1/1A/1198:1202
UAA/GAN
Not in a motif group
homologous
IL_7RQB_036
IL_89002.2
IL_5HAU_0361/1A/1049:1056,
1/1A/1195:1196
SSU/LSU pseudoknot
Not in a motif group
geometric
IL_7RQB_037
IL_15861.7
IL_5HAU_0371/1A/1056:1058,
1/1A/1194:1195
Single bulged U
Not in a motif group
homologous
IL_7RQB_038
IL_83039.13
IL_5HAU_0381/1A/1063:1069,
1/1A/1184:1189
No text annotation
Not in a motif group
geometric
IL_4WF9_039
IL_57188.3
IL_5HAU_0391/1A/1069:1075,
1/1A/1169:1184
No text annotation
Not in a motif group
geometric
IL_7RQB_040
IL_50715.1
IL_5HAU_0401/1A/1076:1079,
1/1A/1166:1168
Isolated non-canonical cWW with bulges
Not in a motif group
homologous
IL_7RQB_041
IL_82068.2
IL_5HAU_0411/1A/1088:1097,
1/1A/1152:1157
No text annotation
Not in a motif group
IL_5HAU_0441/1A/1240:1242,
1/1A/1292:1295
Isolated cWS basepair
Not in a motif group
homologous
IL_7RQB_045
IL_52767.2
IL_5HAU_0451/1A/1246:1250,
1/1A/1285:1288
No text annotation
Not in a motif group
homologous
IL_7RQB_046
IL_68574.2
IL_5HAU_0461/1A/1252:1259,
1/1A/1279:1283
Kink-turn
Not in a motif group
homologous
IL_7RQB_047
IL_70923.2
IL_5HAU_0471/1A/1263:1265,
1/1A/1274:1275
Single bulged A
Not in a motif group
homologous
IL_7RQB_048
IL_37497.2
IL_5HAU_0481/1A/1307:1314,
1/1A/2032:2038
8x7 Sarcin-Ricin; G-bulge
Not in a motif group
homologous
IL_7RQB_049
IL_04346.7
IL_5HAU_0491/1A/1355:1358,
1/1A/1648:1649
Major groove platform; stack outside cWW
Not in a motif group
homologous
IL_7RQB_050
IL_50694.2
IL_5HAU_0501/1A/1364:1368,
1/1A/1376:1378
C-loop
Not in a motif group
homologous
IL_7RQB_051
IL_63596.6
IL_5HAU_0511/1A/1396:1400,
1/1A/1421:1425
UAA/GAN
Not in a motif group
homologous
IL_7RQB_052
IL_89002.2
IL_5HAU_0521/1A/1402:1406,
1/1A/1415:1419
tSH-tHW-tHS
Not in a motif group
homologous
IL_7RQB_053
IL_17136.1
IL_5HAU_0531/1A/1460:1461,
1/1A/1628:1632
No text annotation
Not in a motif group
homologous
IL_7RQB_054
IL_67474.4
IL_5HAU_0541/1A/1462:1466,
1/1A/1623:1627
UAA/GAN
Not in a motif group
homologous
IL_7RQB_055
IL_89002.2
IL_5HAU_0551/1A/1478:1480,
1/1A/1603:1606
Isolated tWW turn
Not in a motif group
homologous
IL_7RQB_056
IL_54997.7
IL_5HAU_0561/1A/1482:1485,
1/1A/1597:1601
tSH-tHW
Not in a motif group
homologous
IL_7RQB_057
IL_04059.1
IL_5HAU_0571/1A/1494:1496,
1/1A/1508:1509
Single stack bend
Not in a motif group
homologous
IL_7RQB_058
IL_76488.2
IL_5HAU_0581/1A/1497:1498,
1/1A/1505:1507
Single bulged A
Not in a motif group
geometric
IL_7RQB_059
IL_37497.2
IL_5HAU_0591/1A/1515:1519,
1/1A/1565:1568
UAA/GAN
Not in a motif group
homologous
IL_7RQB_060
IL_07235.1
IL_5HAU_0601/1A/1527:1528,
1/1A/1551:1557
No text annotation
Not in a motif group
homologous
IL_7RQB_061
IL_52493.1
IL_5HAU_0611/1A/1534:1536,
1/1A/1544:1545
Single bulged A
Not in a motif group
homologous
IL_7RQB_062
IL_37497.2
IL_5HAU_0621/1A/1571:1575,
1/1A/1586:1592
No text annotation
Not in a motif group
homologous
IL_7RQB_063
IL_02656.1
IL_5HAU_0631/1A/1697:1702,
1/1A/2025:2027
No text annotation
Not in a motif group
homologous
IL_5J7L_304
IL_12566.2
IL_5HAU_0641/1A/1709:1711,
1/1A/2016:2018
Isolated tWW turn
Not in a motif group
homologous
IL_7RQB_065
IL_54997.7
IL_5HAU_0651/1A/1712:1715,
1/1A/2014:2015
Major groove platform; stack outside cWW
Not in a motif group
geometric
IL_7RQB_066
IL_50694.2
IL_5HAU_0661/1A/1715:1720,
1/1A/2011:2014
Intercalated tWH
Not in a motif group
homologous
IL_7RQB_067
IL_82842.2
IL_5HAU_0671/1A/1732:1737,
1/1A/1742:1748
tSH-tSH-tHH-tHS
Not in a motif group
homologous
IL_7RQB_068
IL_65969.2
IL_5HAU_0681/1A/1800:1801,
1/1A/2001:2003
Single bulged A
Not in a motif group
homologous
IL_7RQB_069
IL_37497.2
IL_5HAU_0691/1A/1828:1834,
1/1A/1843:1851
Kink-turn related
Not in a motif group
homologous
IL_7RQB_070
IL_17069.3
IL_5HAU_0701/1A/1867:1870,
1/1A/1923:1924
Major groove outside cWW, minor groove, intercalation pocket
Not in a motif group
homologous
IL_5J7L_314
IL_88739.1
IL_5HAU_0711/1A/1871:1872,
1/1A/1919:1922
Major groove outside cWW, minor groove, intercalation pocket
Not in a motif group
homologous
IL_7RQB_072
IL_16396.2
IL_5HAU_0721/1A/1876:1879,
1/1A/1914:1915
Minor groove platform
Not in a motif group
homologous
IL_7RQB_073
IL_88739.1
IL_5HAU_0731/1A/1881:1885,
1/1A/1908:1912
UAA/GAN with extra pair
Not in a motif group
homologous
IL_7RQB_074
IL_90318.1
IL_5HAU_0741/1A/1886:1890,
1/1A/1903:1907
Triple sheared
Not in a motif group
homologous
IL_7RQB_075
IL_56467.8
IL_5HAU_0751/1A/1954:1955,
1/1A/1985:1988
Multiple bulged bases
Not in a motif group
geometric
IL_7RQB_076
IL_59677.2
IL_5HAU_0761/1A/1955:1966,
1/1A/1982:1985
No text annotation
Not in a motif group
homologous
IL_4WF9_077
IL_81589.2
IL_5HAU_0771/1A/2071:2073,
1/1A/2628:2629
Major groove platform
Not in a motif group
homologous
IL_7RQB_078
IL_27635.1
IL_5HAU_0781/1A/2075:2078,
1/1A/2622:2626
No text annotation
Not in a motif group
homologous
IL_7RQB_079
IL_01206.1
IL_5HAU_0791/1A/2088:2090,
1/1A/2453:2454
Single bulged U
Not in a motif group
homologous
IL_7RQB_080
IL_83039.13
IL_5HAU_0801/1A/2091:2092,
1/1A/2449:2452
Minor groove platform
Not in a motif group
homologous
IL_4WF9_081
IL_42622.2
IL_5HAU_0811/1A/2102:2104,
1/1A/2247:2250
Isolated tHS basepair with bulges
Not in a motif group
homologous
IL_7RQB_082
IL_38958.7
IL_5HAU_0821/1A/2106:2108,
1/1A/2243:2245
No text annotation
Not in a motif group
homologous
IL_7RQB_083
IL_95997.1
IL_5HAU_0831/1A/2120:2122,
1/1A/2209:2211
No text annotation
Not in a motif group
IL_5HAU_0891/1A/2308:2310,
1/1A/2328:2332
Isolated tHS basepair with bulges
Not in a motif group
geometric
IL_7RQB_088
IL_38958.7
IL_5HAU_0901/1A/2361:2364,
1/1A/2375:2378
Double sheared
Not in a motif group
homologous
IL_7RQB_089
IL_09705.9
IL_5HAU_0911/1A/2412:2414,
1/1A/2425:2426
Major groove platform
Not in a motif group
homologous
IL_7RQB_090
IL_27635.1
IL_5HAU_0921/1A/2464:2465,
1/1A/2509:2511
Single stack bend
Not in a motif group
geometric
IL_7RQB_091
IL_76488.2
IL_5HAU_0931/1A/2465:2466,
1/1A/2507:2509
Major groove platform
Not in a motif group
homologous
IL_7RQB_092
IL_27635.1
IL_5HAU_0941/1A/2468:2470,
1/1A/2504:2505
Major groove platform
Not in a motif group
geometric
IL_4WF9_091
IL_27635.1
IL_5HAU_0951/1A/2470:2472,
1/1A/2500:2504
Major groove minor groove platform with extra cWW
Not in a motif group
homologous
IL_4WF9_092
IL_92788.2