6P5N Internal, Hairpin and 3-way Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_6P5N_001 | 1/1/6444:6460 | No text annotation Not in a motif group | ||
| HL_6P5N_002 | 1/1/6497:6502 | No text annotation Not in a motif group | geometric HL_5U30_001 HL_69353.7 | |
| HL_6P5N_003 | 1/1/6521:6527 | No text annotation Not in a motif group | ||
| HL_6P5N_004 | 1/1/6560:6569 | No text annotation Not in a motif group | geometric HL_4V83_139 HL_16135.1 | |
| HL_6P5N_005 | 1/1/6584:6591 | No text annotation Not in a motif group | ||
| HL_6P5N_006 | 1/2/7:17 | No text annotation Not in a motif group | homologous HL_4V88_186 HL_67265.4 | |
| HL_6P5N_007 | 1/2/69:80 | No text annotation Not in a motif group | ||
| HL_6P5N_008 | 1/2/156:162 | Other HL Not in a motif group | homologous HL_4V88_188 HL_43074.18 | |
| HL_6P5N_009 | 1/2/195:203 | No text annotation Not in a motif group | ||
| HL_6P5N_010 | 1/2/288:295 | T-loop with 1 bulged base Not in a motif group | homologous HL_4V88_191 HL_68493.6 | |
| HL_6P5N_012 | 1/2/377:387 | No text annotation Not in a motif group | ||
| HL_6P5N_013 | 1/2/416:421 | No text annotation Not in a motif group | homologous HL_4V88_194 HL_18785.1 | |
| HL_6P5N_014 | 1/2/441:452 | No text annotation Not in a motif group | homologous HL_4V88_195 HL_22443.1 | |
| HL_6P5N_015 | 1/2/462:467 | UNCG Not in a motif group | homologous HL_4V88_196 HL_79299.11 | |
| HL_6P5N_016 | 1/2/498:504 | No text annotation Not in a motif group | homologous HL_4V88_197 HL_50374.1 | |
| HL_6P5N_017 | 1/2/539:544 | No text annotation Not in a motif group | homologous HL_4V88_198 HL_30541.1 | |
| HL_6P5N_018 | 1/2/569:581 | No text annotation Not in a motif group | geometric HL_4V88_199 HL_17086.2 | |
| HL_6P5N_019 | 1/2/618:623 | Other HL Not in a motif group | homologous HL_4V88_200 HL_43074.18 | |
| HL_6P5N_022 | 1/2/820:828 | No text annotation Not in a motif group | homologous HL_4V88_203 HL_72066.1 | |
| HL_6P5N_024 | 1/2/884:902 | No text annotation Not in a motif group | ||
| HL_6P5N_025 | 1/2/956:967 | No text annotation Not in a motif group | ||
| HL_6P5N_026 | 1/2/994:999 | Other HL Not in a motif group | homologous HL_4V88_207 HL_43074.18 | |
| HL_6P5N_027 | 1/2/1054:1064 | No text annotation Not in a motif group | homologous HL_4V88_208 HL_87219.4 | |
| HL_6P5N_028 | 1/2/1113:1120 | No text annotation Not in a motif group | ||
| HL_6P5N_029 | 1/2/1141:1146 | Other HL Not in a motif group | homologous HL_4V88_210 HL_43074.18 | |
| HL_6P5N_030 | 1/2/1178:1183 | GNRA Not in a motif group | homologous HL_4V88_211 HL_43074.18 | |
| HL_6P5N_031 | 1/2/1245:1254 | No text annotation Not in a motif group | homologous HL_4V88_212 HL_96854.1 | |
| HL_6P5N_032 | 1/2/1294:1305 | No text annotation Not in a motif group | ||
| HL_6P5N_033 | 1/2/1353:1358 | GNRA Not in a motif group | homologous HL_4V88_214 HL_43074.18 | |
| HL_6P5N_034 | 1/2/1366:1373 | No text annotation Not in a motif group | homologous HL_4V88_215 HL_54035.7 | |
| HL_6P5N_036 | 1/2/1460:1466 | Other HL Not in a motif group | geometric HL_2CZJ_007 HL_79299.11 | |
| HL_6P5N_037 | 1/2/1565:1570 | GNRA Not in a motif group | homologous HL_4V88_218 HL_43074.18 | |
| HL_6P5N_038 | 1/2/1613:1626 | No text annotation Not in a motif group | ||
| HL_6P5N_039 | 1/2/1658:1666 | No text annotation Not in a motif group | homologous HL_4V88_220 HL_01181.4 | |
| HL_6P5N_041 | 1/2/1847:1852 | Other HL Not in a motif group | homologous HL_4V88_222 HL_43074.18 | |
| HL_6P5N_042 | 1/5/37:44 | No text annotation Not in a motif group | geometric HL_5TBW_001 HL_23481.5 | |
| HL_6P5N_043 | 1/5/68:73 | No text annotation Not in a motif group | homologous HL_5TBW_002 HL_96776.3 | |
| HL_6P5N_044 | 1/5/89:95 | No text annotation Not in a motif group | homologous HL_5TBW_003 HL_67216.5 | |
| HL_6P5N_045 | 1/5/130:138 | No text annotation Not in a motif group | ||
| HL_6P5N_046 | 1/5/204:211 | T-loop with 1 bulged base Not in a motif group | homologous HL_5TBW_005 HL_68493.6 | |
| HL_6P5N_047 | 1/5/222:226 | No text annotation Not in a motif group | homologous HL_5TBW_006 HL_98557.5 | |
| HL_6P5N_048 | 1/5/230:238 | No text annotation Not in a motif group | homologous HL_5TBW_007 HL_08002.6 | |
| HL_6P5N_049 | 1/5/289:298 | No text annotation Not in a motif group | homologous HL_5TBW_008 HL_54035.7 | |
| HL_6P5N_050 | 1/5/314:323 | No text annotation Not in a motif group | ||
| HL_6P5N_051 | 1/5/368:373 | Other HL Not in a motif group | homologous HL_5TBW_010 HL_43074.18 | |
| HL_6P5N_052 | 1/5/393:398 | GNRA Not in a motif group | homologous HL_5TBW_011 HL_43074.18 | |
| HL_6P5N_053 | 1/5/521:641 | No text annotation Not in a motif group | ||
| HL_6P5N_054 | 1/5/756:906 | No text annotation Not in a motif group | ||
| HL_6P5N_055 | 1/5/962:970 | No text annotation Not in a motif group | geometric HL_2Y9H_003 HL_98557.5 | |
| HL_6P5N_056 | 1/5/1177:1184 | No text annotation Not in a motif group | geometric HL_4WF9_003 HL_62869.3 | |
| HL_6P5N_057 | 1/5/1317:1326 | T-loop with 2 stacked bulged bases Not in a motif group | homologous HL_5TBW_014 HL_33239.17 | |
| HL_6P5N_058 | 1/5/1363:1374 | No text annotation Not in a motif group | geometric HL_2ZZM_002 HL_18218.2 | |
| HL_6P5N_059 | 1/5/1389:1394 | GNRA Not in a motif group | homologous HL_5TBW_016 HL_43074.18 | |
| HL_6P5N_060 | 1/5/1404:1413 | No text annotation Not in a motif group | geometric HL_5TBW_006 HL_98557.5 | |
| HL_6P5N_061 | 1/5/1436:1448 | No text annotation Not in a motif group | geometric HL_2Y8W_001 HL_69459.1 | |
| HL_6P5N_062 | 1/5/1479:1486 | Other HL Not in a motif group | geometric HL_5J7L_200 HL_96776.3 | |
| HL_6P5N_063 | 1/5/1561:1566 | GNRA Not in a motif group | homologous HL_5TBW_019 HL_43074.18 | |
| HL_6P5N_064 | 1/5/1593:1602 | No text annotation Not in a motif group | homologous HL_5TBW_020 HL_39334.5 | |
| HL_6P5N_065 | 1/5/1627:1635 | No text annotation Not in a motif group | homologous HL_5TBW_021 HL_05832.1 | |
| HL_6P5N_066 | 1/5/1675:1680 | No text annotation Not in a motif group | homologous HL_5TBW_022 HL_15942.5 | |
| HL_6P5N_067 | 1/5/1758:1774 | No text annotation Not in a motif group | ||
| HL_6P5N_068 | 1/5/1816:1823 | No text annotation Not in a motif group | geometric HL_5TBW_024 HL_54035.7 | |
| HL_6P5N_069 | 1/5/1864:1870 | GNRA Not in a motif group | homologous HL_5TBW_025 HL_43074.18 | |
| HL_6P5N_070 | 1/5/1886:1893 | No text annotation Not in a motif group | homologous HL_5TBW_026 HL_72451.5 | |
| HL_6P5N_071 | 1/5/1978:1988 | No text annotation Not in a motif group | ||
| HL_6P5N_072 | 1/5/2005:2014 | No text annotation Not in a motif group | ||
| HL_6P5N_073 | 1/5/2087:2270 | No text annotation Not in a motif group | ||
| HL_6P5N_074 | 1/5/2317:2322 | GNRA Not in a motif group | homologous HL_5TBW_030 HL_43074.18 | |
| HL_6P5N_075 | 1/5/2376:2384 | T-loop with 2 stacked bulged bases Not in a motif group | homologous HL_5TBW_031 HL_33239.17 | |
| HL_6P5N_076 | 1/5/2420:2426 | No text annotation Not in a motif group | homologous HL_5TBW_032 HL_86880.5 | |
| HL_6P5N_077 | 1/5/2458:2463 | Other HL Not in a motif group | homologous HL_5TBW_033 HL_43074.18 | |
| HL_6P5N_078 | 1/5/2486:2492 | No text annotation Not in a motif group | ||
| HL_6P5N_079 | 1/5/2523:2532 | No text annotation Not in a motif group | homologous HL_5TBW_035 HL_78457.4 | |
| HL_6P5N_080 | 1/5/2561:2566 | No text annotation Not in a motif group | geometric HL_3OXE_002 HL_32527.3 | |
| HL_6P5N_081 | 1/5/2578:2583 | GNRA Not in a motif group | homologous HL_5TBW_036 HL_43074.18 | |
| HL_6P5N_082 | 1/5/2624:2632 | No text annotation Not in a motif group | homologous HL_5TBW_037 HL_73793.2 | |
| HL_6P5N_083 | 1/5/2664:2670 | No text annotation Not in a motif group | homologous HL_5TBW_038 HL_00923.1 | |
| HL_6P5N_084 | 1/5/2705:2710 | No text annotation Not in a motif group | geometric HL_5NFV_001 HL_58912.1 | |
| HL_6P5N_085 | 1/5/2738:2742 | No text annotation Not in a motif group | homologous HL_5TBW_040 HL_69353.7 | |
| HL_6P5N_086 | 1/5/2792:2799 | No text annotation Not in a motif group | homologous HL_5TBW_041 HL_66171.3 | |
| HL_6P5N_087 | 1/5/2810:2816 | GNRA with one bulged base Not in a motif group | homologous HL_5TBW_042 HL_02361.6 | |
| HL_6P5N_088 | 1/5/2872:2877 | UNCG Not in a motif group | homologous HL_5TBW_043 HL_79299.11 | |
| HL_6P5N_089 | 1/5/2901:3598 | No text annotation Not in a motif group | ||
| HL_6P5N_090 | 1/5/3614:3618 | No text annotation Not in a motif group | homologous HL_5TBW_045 HL_99223.1 | |
| HL_6P5N_091 | 1/5/3639:3649 | No text annotation Not in a motif group | homologous HL_5TBW_046 HL_43613.4 | |
| HL_6P5N_092 | 1/5/3668:3674 | GNRA Not in a motif group | homologous HL_5TBW_047 HL_43074.18 | |
| HL_6P5N_093 | 1/5/3724:3729 | Other HL Not in a motif group | homologous HL_5TBW_048 HL_43074.18 | |
| HL_6P5N_094 | 1/5/3757:3767 | No text annotation Not in a motif group | homologous HL_5TBW_049 HL_98248.1 | |
| HL_6P5N_095 | 1/5/3796:3804 | No text annotation Not in a motif group | homologous HL_5TBW_050 HL_53760.4 | |
| HL_6P5N_096 | 1/5/3873:3882 | No text annotation Not in a motif group | homologous HL_5TBW_051 HL_90642.5 | |
| HL_6P5N_097 | 1/5/3976:4035 | No text annotation Not in a motif group | ||
| HL_6P5N_098 | 1/5/4100:4109 | No text annotation Not in a motif group | ||
| HL_6P5N_099 | 1/5/4134:4150 | No text annotation Not in a motif group | ||
| HL_6P5N_100 | 1/5/4193:4201 | No text annotation Not in a motif group | homologous HL_5TBW_054 HL_46891.3 | |
| HL_6P5N_101 | 1/5/4210:4222 | No text annotation Not in a motif group | homologous HL_5TBW_055 HL_19870.5 | |
| HL_6P5N_102 | 1/5/4250:4258 | No text annotation Not in a motif group | homologous HL_5TBW_056 HL_76406.3 | |
| HL_6P5N_103 | 1/5/4270:4277 | No text annotation Not in a motif group | homologous HL_5TBW_057 HL_46142.8 | |
| HL_6P5N_104 | 1/5/4301:4309 | No text annotation Not in a motif group | homologous HL_5TBW_058 HL_14725.1 | |
| HL_6P5N_105 | 1/5/4321:4326 | GNRA Not in a motif group | homologous HL_5TBW_059 HL_43074.18 | |
| HL_6P5N_106 | 1/5/4352:4362 | No text annotation Not in a motif group | geometric HL_2ZZM_002 HL_18218.2 | |
| HL_6P5N_107 | 1/5/4417:4425 | No text annotation Not in a motif group | homologous HL_5TBW_061 HL_36421.5 | |
| HL_6P5N_108 | 1/5/4474:4481 | No text annotation Not in a motif group | homologous HL_5TBW_062 HL_92681.5 | |
| HL_6P5N_109 | 1/5/4497:4503 | No text annotation Not in a motif group | geometric HL_5TBW_063 HL_26055.6 | |
| HL_6P5N_110 | 1/5/4540:4545 | GNRA Not in a motif group | homologous HL_5TBW_064 HL_43074.18 | |
| HL_6P5N_111 | 1/5/4603:4608 | GNRA Not in a motif group | geometric HL_5TBW_065 HL_43074.18 | |
| HL_6P5N_112 | 1/5/4646:4651 | Ribsomal LSU H95 Not in a motif group | homologous HL_5TBW_066 HL_67719.1 | |
| HL_6P5N_113 | 1/5/4688:4702 | No text annotation Not in a motif group | homologous HL_5TBW_067 HL_56677.5 | |
| HL_6P5N_114 | 1/5/4775:4860 | No text annotation Not in a motif group | ||
| HL_6P5N_115 | 1/5/4904:4918 | No text annotation Not in a motif group | ||
| HL_6P5N_116 | 1/5/4975:4983 | No text annotation Not in a motif group | geometric HL_5J7L_201 HL_05018.6 | |
| HL_6P5N_117 | 1/5/5020:5029 | No text annotation Not in a motif group | ||
| HL_6P5N_118 | 1/7/36:41 | No text annotation Not in a motif group | homologous HL_5TBW_185 HL_02733.5 | |
| HL_6P5N_119 | 1/7/86:91 | GNRA Not in a motif group | homologous HL_5TBW_186 HL_43074.18 | |
| HL_6P5N_120 | 1/8/47:56 | No text annotation Not in a motif group | geometric HL_7RQB_001 HL_29414.1 | |
| HL_6P5N_122 | 1/8/107:112 | No text annotation Not in a motif group | homologous HL_5TBW_075 HL_06569.2 | |
| HL_6P5N_123 | 1/8/121:129 | No text annotation Not in a motif group |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_6P5N_011 | No text annotation | ||
| HL_6P5N_020 | No text annotation | ||
| HL_6P5N_021 | No text annotation | ||
| HL_6P5N_023 | No text annotation | ||
| HL_6P5N_035 | No text annotation | ||
| HL_6P5N_040 | No text annotation | ||
| HL_6P5N_121 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_6P5N_001 | 1/1/6491:6494, 1/1/6505:6513 | No text annotation Not in a motif group | ||
| IL_6P5N_002 | 1/1/6558:6560, 1/1/6569:6572 | No text annotation Not in a motif group | geometric IL_4P3T_002 IL_87332.1 | |
| IL_6P5N_003 | 1/2/23:25, 1/2/649:651 | No text annotation Not in a motif group | geometric IL_4M4O_001 IL_01312.13 | |
| IL_6P5N_004 | 1/2/34:36, 1/2/519:521 | UC cWW Not in a motif group | homologous IL_4V88_385 IL_01312.13 | |
| IL_6P5N_005 | 1/2/37:40, 1/2/514:518 | Double sheared Not in a motif group | geometric IL_4WF9_016 IL_09705.7 | |
| IL_6P5N_006 | 1/2/41:47, 1/2/479:481 | No text annotation Not in a motif group | homologous IL_4V88_387 IL_34626.4 | |
| IL_6P5N_007 | 1/2/49:51, 1/2/476:477 | Minor groove platform Not in a motif group | homologous IL_4V88_388 IL_06437.11 | |
| IL_6P5N_008 | 1/2/56:62, 1/2/86:89 | Other IL Not in a motif group | geometric IL_5TBW_043 IL_08757.3 | |
| IL_6P5N_009 | 1/2/63:68, 1/2/81:85 | No text annotation Not in a motif group | homologous IL_4V88_390 IL_59423.1 | |
| IL_6P5N_010 | 1/2/108:110, 1/2/351:353 | No text annotation Not in a motif group | geometric IL_2O3V_001 IL_01312.13 | |
| IL_6P5N_011 | 1/2/110:112, 1/2/349:351 | No text annotation Not in a motif group | geometric IL_4WF9_020 IL_01312.13 | |
| IL_6P5N_012 | 1/2/112:115, 1/2/348:349 | Multiple bulged bases Not in a motif group | homologous IL_4V88_392 IL_13730.12 | |
| IL_6P5N_013 | 1/2/116:121, 1/2/343:347 | No text annotation Not in a motif group | homologous IL_4V88_393 IL_76386.1 | |
| IL_6P5N_014 | 1/2/123:125, 1/2/338:341 | No text annotation Not in a motif group | ||
| IL_6P5N_015 | 1/2/144:151, 1/2/167:175 | No text annotation Not in a motif group | ||
| IL_6P5N_016 | 1/2/152:154, 1/2/164:166 | Isolated cWH basepair Not in a motif group | geometric IL_6RA4_002 IL_42589.6 | |
| IL_6P5N_017 | 1/2/188:192, 1/2/207:211 | Triple sheared Not in a motif group | geometric IL_4WFL_001 IL_56467.6 | |
| IL_6P5N_018 | 1/2/194:195, 1/2/203:205 | Single stack bend Not in a motif group | geometric IL_6FZ0_001 IL_04038.4 | |
| IL_6P5N_020 | 1/2/312:314, 1/2/336:337 | Single bulged A Not in a motif group | homologous IL_4V88_399 IL_80007.16 | |
| IL_6P5N_021 | 1/2/317:320, 1/2/331:333 | No text annotation Not in a motif group | homologous IL_4V88_400 IL_05922.1 | |
| IL_6P5N_022 | 1/2/359:364, 1/2/396:403 | Kink-turn with non-sequential stacking Not in a motif group | homologous IL_4V88_402 IL_29549.9 | |
| IL_6P5N_023 | 1/2/366:371, 1/2/393:394 | No text annotation Not in a motif group | geometric IL_5Y58_001 IL_98882.3 | |
| IL_6P5N_024 | 1/2/411:413, 1/2/424:429 | No text annotation Not in a motif group | homologous IL_4V88_404 IL_46732.1 | |
| IL_6P5N_025 | 1/2/437:439, 1/2/454:456 | Isolated cWH basepair Not in a motif group | homologous IL_4V88_405 IL_42589.6 | |
| IL_6P5N_026 | 1/2/459:461, 1/2/468:470 | Isolated near basepair Not in a motif group | homologous IL_4V88_406 IL_01312.13 | |
| IL_6P5N_027 | 1/2/487:489, 1/2/511:512 | Single bulged U Not in a motif group | homologous IL_4V88_407 IL_83039.11 | |
| IL_6P5N_028 | 1/2/491:496, 1/2/506:509 | C-loop with extra cWW pair Not in a motif group | homologous IL_4V88_408 IL_51590.1 | |
| IL_6P5N_029 | 1/2/529:532, 1/2/552:556 | No text annotation Not in a motif group | ||
| IL_6P5N_030 | 1/2/533:538, 1/2/545:551 | No text annotation Not in a motif group | ||
| IL_6P5N_031 | 1/2/563:565, 1/2/585:592 | No text annotation Not in a motif group | ||
| IL_6P5N_032 | 1/2/566:569, 1/2/581:584 | tSH-tHW Not in a motif group | geometric IL_5UNE_005 IL_08757.3 | |
| IL_6P5N_033 | 1/2/599:608, 1/2/635:637 | No text annotation Not in a motif group | ||
| IL_6P5N_034 | 1/2/611:617, 1/2/624:632 | No text annotation Not in a motif group | homologous IL_4V88_415 IL_04667.1 | |
| IL_6P5N_035 | 1/2/663:665, 1/2/1162:1164 | No text annotation Not in a motif group | geometric IL_1Y27_001 IL_01312.13 | |
| IL_6P5N_036 | 1/2/665:671, 1/2/1161:1162 | No text annotation Not in a motif group | geometric IL_4LFB_022 IL_19222.1 | |
| IL_6P5N_037 | 1/2/673:675, 1/2/1030:1032 | No text annotation Not in a motif group | homologous IL_4V88_417 IL_01312.13 | |
| IL_6P5N_038 | 1/2/676:680, 1/2/1025:1029 | tSH-tHW-tHS Not in a motif group | homologous IL_4V88_418 IL_39521.5 | |
| IL_6P5N_039 | 1/2/692:694, 1/2/733:735 | No text annotation Not in a motif group | ||
| IL_6P5N_040 | 1/2/802:803, 1/2/860:863 | Major groove minor groove platform; mini C-loop Not in a motif group | homologous IL_4V88_423 IL_09061.4 | |
| IL_6P5N_041 | 1/2/805:807, 1/2/856:858 | No text annotation Not in a motif group | homologous IL_4V88_424 IL_01312.13 | |
| IL_6P5N_042 | 1/2/807:815, 1/2/849:856 | No text annotation Not in a motif group | geometric IL_4V88_425 IL_69091.1 | |
| IL_6P5N_043 | 1/2/874:876, 1/2/910:912 | No text annotation Not in a motif group | geometric IL_4V8Q_188 IL_01312.13 | |
| IL_6P5N_044 | 1/2/877:879, 1/2/907:909 | No text annotation Not in a motif group | geometric IL_3DIL_006 IL_01312.13 | |
| IL_6P5N_045 | 1/2/922:923, 1/2/1019:1022 | Major groove platform; stack outside cWW Not in a motif group | homologous IL_4V88_428 IL_70995.6 | |
| IL_6P5N_046 | 1/2/924:927, 1/2/1014:1018 | Tandem non-canonical cWW pairs Not in a motif group | homologous IL_4V88_429 IL_85877.10 | |
| IL_6P5N_047 | 1/2/928:931, 1/2/1010:1013 | Tandem non-canonical cWW pairs Not in a motif group | homologous IL_4V88_430 IL_85877.10 | |
| IL_6P5N_048 | 1/2/931:935, 1/2/1007:1010 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_4V88_431 IL_85877.10 | |
| IL_6P5N_049 | 1/2/942:946, 1/2/980:984 | No text annotation Not in a motif group | ||
| IL_6P5N_050 | 1/2/952:956, 1/2/967:974 | Kink-turn Not in a motif group | homologous IL_4V88_434 IL_29549.9 | |
| IL_6P5N_051 | 1/2/1042:1047, 1/2/1071:1073 | Other IL Not in a motif group | geometric IL_4V88_435 IL_51590.1 | |
| IL_6P5N_052 | 1/2/1047:1051, 1/2/1067:1071 | tSH-tHW-tHS Not in a motif group | homologous IL_4V88_436 IL_39521.5 | |
| IL_6P5N_053 | 1/2/1091:1093, 1/2/1152:1158 | No text annotation Not in a motif group | homologous IL_4V88_437 IL_19557.1 | |
| IL_6P5N_054 | 1/2/1098:1101, 1/2/1131:1134 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_4V88_438 IL_85877.10 | |
| IL_6P5N_055 | 1/2/1101:1103, 1/2/1129:1131 | No text annotation Not in a motif group | geometric IL_4WF9_083 IL_01312.13 | |
| IL_6P5N_056 | 1/2/1108:1110, 1/2/1123:1124 | Minor groove platform Not in a motif group | geometric IL_4V88_412 IL_06437.11 | |
| IL_6P5N_057 | 1/2/1168:1175, 1/2/1186:1191 | 8x6 Sarcin-Ricin with inserted Y; G-bulge Not in a motif group | homologous IL_4V88_440 IL_24606.1 | |
| IL_6P5N_058 | 1/2/1203:1204, 1/2/1694:1696 | Single bulged A Not in a motif group | homologous IL_4V88_441 IL_80007.16 | |
| IL_6P5N_059 | 1/2/1206:1208, 1/2/1691:1692 | Single bulged G Not in a motif group | homologous IL_4V88_442 IL_59137.10 | |
| IL_6P5N_060 | 1/2/1214:1217, 1/2/1681:1685 | C-loop Not in a motif group | homologous IL_4V88_443 IL_63596.4 | |
| IL_6P5N_061 | 1/2/1230:1232, 1/2/1526:1528 | No text annotation Not in a motif group | homologous IL_4V88_444 IL_01312.13 | |
| IL_6P5N_062 | 1/2/1235:1236, 1/2/1521:1523 | Minor groove platform Not in a motif group | homologous IL_4V88_445 IL_06437.11 | |
| IL_6P5N_063 | 1/2/1270:1272, 1/2/1510:1512 | No text annotation Not in a motif group | geometric IL_3MEI_002 IL_01312.13 | |
| IL_6P5N_064 | 1/2/1325:1327, 1/2/1502:1503 | Single bulged U Not in a motif group | homologous IL_4V88_449 IL_83039.11 | |
| IL_6P5N_065 | 1/2/1328:1335, 1/2/1492:1501 | No text annotation Not in a motif group | ||
| IL_6P5N_066 | 1/2/1337:1338, 1/2/1488:1490 | Single bulged A Not in a motif group | homologous IL_4V88_452 IL_80007.16 | |
| IL_6P5N_067 | 1/2/1347:1349, 1/2/1380:1382 | Isolated cWH basepair Not in a motif group | homologous IL_4V88_453 IL_42589.6 | |
| IL_6P5N_068 | 1/2/1363:1365, 1/2/1374:1375 | Minor groove platform Not in a motif group | geometric IL_4V88_454 IL_06437.11 | |
| IL_6P5N_069 | 1/2/1395:1402, 1/2/1444:1450 | No text annotation Not in a motif group | ||
| IL_6P5N_070 | 1/2/1402:1405, 1/2/1441:1444 | Minor groove platform Not in a motif group | homologous IL_4V88_456 IL_69507.1 | |
| IL_6P5N_071 | 1/2/1412:1413, 1/2/1427:1429 | Single bulged G Not in a motif group | geometric IL_5J7L_019 IL_59137.10 | |
| IL_6P5N_072 | 1/2/1537:1539, 1/2/1594:1596 | No text annotation Not in a motif group | geometric IL_3SZX_002 IL_01312.13 | |
| IL_6P5N_073 | 1/2/1550:1558, 1/2/1577:1582 | No text annotation Not in a motif group | geometric IL_5J7L_055 IL_75461.2 | |
| IL_6P5N_074 | 1/2/1560:1562, 1/2/1573:1575 | No text annotation Not in a motif group | geometric IL_5AOX_001 IL_01312.13 | |
| IL_6P5N_075 | 1/2/1604:1610, 1/2/1629:1635 | No text annotation Not in a motif group | ||
| IL_6P5N_076 | 1/2/1700:1702, 1/2/1833:1836 | No text annotation Not in a motif group | geometric IL_4V88_463 IL_36143.2 | |
| IL_6P5N_077 | 1/2/1702:1705, 1/2/1829:1833 | No text annotation Not in a motif group | ||
| IL_6P5N_078 | 1/2/1706:1708, 1/2/1826:1828 | No text annotation Not in a motif group | geometric IL_5MWI_007 IL_01312.13 | |
| IL_6P5N_079 | 1/2/1708:1711, 1/2/1822:1826 | No text annotation Not in a motif group | geometric IL_1CSL_001 IL_52451.10 | |
| IL_6P5N_080 | 1/2/1714:1716, 1/2/1817:1819 | AA cWW Not in a motif group | homologous IL_4V88_467 IL_01312.13 | |
| IL_6P5N_081 | 1/2/1717:1720, 1/2/1813:1816 | Double sheared Not in a motif group | homologous IL_4V88_468 IL_09705.7 | |
| IL_6P5N_082 | 1/2/1720:1722, 1/2/1812:1813 | Single bulged U Not in a motif group | geometric IL_4V88_469 IL_21340.1 | |
| IL_6P5N_083 | 1/2/1729:1731, 1/2/1803:1805 | No text annotation Not in a motif group | homologous IL_4V88_470 IL_01312.13 | |
| IL_6P5N_084 | 1/2/1733:1736, 1/2/1798:1801 | Double sheared Not in a motif group | homologous IL_4V88_471 IL_09705.7 | |
| IL_6P5N_085 | 1/2/1739:1741, 1/2/1793:1795 | UU cWW water inserted Not in a motif group | geometric IL_4E48_002 IL_01312.13 | |
| IL_6P5N_086 | 1/2/1742:1746, 1/2/1788:1792 | Triple sheared Not in a motif group | homologous IL_4V88_474 IL_56467.6 | |
| IL_6P5N_087 | 1/2/1750:1753, 1/2/1779:1784 | No text annotation Not in a motif group | ||
| IL_6P5N_088 | 1/2/1754:1756, 1/2/1777:1778 | Single stack bend Not in a motif group | geometric IL_7A0S_083 IL_04038.4 | |
| IL_6P5N_089 | 1/5/6:7, 1/8/149:151 | Single bulged C Not in a motif group | homologous IL_5TBW_002 IL_61258.10 | |
| IL_6P5N_090 | 1/5/12:14, 1/8/143:144 | Single bulged U Not in a motif group | homologous IL_5TBW_003 IL_83039.11 | |
| IL_6P5N_091 | 1/5/16:18, 1/8/139:141 | No text annotation Not in a motif group | geometric IL_3ICQ_003 IL_01312.13 | |
| IL_6P5N_092 | 1/5/26:27, 1/5/55:57 | Single stack bend Not in a motif group | homologous IL_5TBW_004 IL_04038.4 | |
| IL_6P5N_093 | 1/5/30:37, 1/5/44:52 | 9x8 Sarcin-Ricin; G-bulge Not in a motif group | geometric IL_4WF9_008 IL_61812.1 | |
| IL_6P5N_094 | 1/5/81:88, 1/5/96:102 | No text annotation Not in a motif group | homologous IL_5TBW_006 IL_29509.1 | |
| IL_6P5N_095 | 1/5/118:121, 1/5/152:153 | Major groove outside cWW, minor groove, intercalation pocket Not in a motif group | geometric IL_1U9S_003 IL_13730.12 | |
| IL_6P5N_096 | 1/5/121:122, 1/5/147:152 | No text annotation Not in a motif group | homologous IL_5TBW_007 IL_19724.1 | |
| IL_6P5N_097 | 1/5/125:126, 1/5/142:144 | Single bulged C Not in a motif group | geometric IL_1DQF_001 IL_61258.10 | |
| IL_6P5N_098 | 1/5/168:173, 1/5/263:267 | No text annotation Not in a motif group | ||
| IL_6P5N_099 | 1/5/178:181, 1/5/256:258 | No text annotation Not in a motif group | ||
| IL_6P5N_100 | 1/5/181:189, 1/5/252:256 | No text annotation Not in a motif group | ||
| IL_6P5N_101 | 1/5/195:196, 1/5/244:246 | Single bulged C Not in a motif group | geometric IL_1DQF_001 IL_61258.10 | |
| IL_6P5N_102 | 1/5/199:201, 1/5/214:215 | Single bulged U Not in a motif group | homologous IL_5TBW_012 IL_83039.11 | |
| IL_6P5N_103 | 1/5/339:342, 1/8/32:33 | Minor groove platform Not in a motif group | geometric IL_7RQB_073 IL_06437.11 | |
| IL_6P5N_104 | 1/5/348:350, 1/8/25:26 | Single bulged A Not in a motif group | homologous IL_5TBW_013 IL_80007.16 | |
| IL_6P5N_105 | 1/5/387:390, 1/5/401:414 | No text annotation Not in a motif group | geometric IL_5TBW_014 IL_60992.5 | |
| IL_6P5N_106 | 1/5/415:421, 1/8/13:19 | Triple sheared with non-canonical cWW Not in a motif group | homologous IL_5TBW_015 IL_66414.5 | |
| IL_6P5N_107 | 1/5/443:446, 1/5/1300:1304 | No text annotation Not in a motif group | geometric IL_6AZ4_001 IL_01759.1 | |
| IL_6P5N_108 | 1/5/448:450, 1/5/1297:1298 | Single bulged C Not in a motif group | geometric IL_4C7O_003 IL_61258.10 | |
| IL_6P5N_109 | 1/5/459:460, 1/5/695:697 | Single bulged C Not in a motif group | geometric IL_4WF9_035 IL_61258.10 | |
| IL_6P5N_110 | 1/5/460:464, 1/5/691:695 | No text annotation Not in a motif group | geometric IL_5TBW_121 IL_05867.1 | |
| IL_6P5N_111 | 1/5/466:472, 1/5/682:689 | No text annotation Not in a motif group | ||
| IL_6P5N_112 | 1/5/480:486, 1/5/670:674 | No text annotation Not in a motif group | ||
| IL_6P5N_113 | 1/5/487:488, 1/5/665:669 | Multiple bulged bases Not in a motif group | geometric IL_1R3E_002 IL_13730.12 | |
| IL_6P5N_114 | 1/5/491:493, 1/5/661:662 | No text annotation Not in a motif group | ||
| IL_6P5N_115 | 1/5/497:500, 1/5/655:657 | Isolated cWS basepair Not in a motif group | geometric IL_7A0S_041 IL_67621.5 | |
| IL_6P5N_116 | 1/5/508:510, 1/5/649:650 | Single bulged A Not in a motif group | geometric IL_6WPI_001 IL_80007.16 | |
| IL_6P5N_117 | 1/5/517:521, 1/5/641:644 | No text annotation Not in a motif group | ||
| IL_6P5N_118 | 1/5/709:710, 1/5/1286:1288 | Single bulged G Not in a motif group | geometric IL_4LFB_036 IL_59137.10 | |
| IL_6P5N_119 | 1/5/723:724, 1/5/942:945 | Multiple bulged bases Not in a motif group | geometric IL_7V9E_001 IL_13730.12 | |
| IL_6P5N_120 | 1/5/727:731, 1/5/938:939 | No text annotation Not in a motif group | ||
| IL_6P5N_121 | 1/5/732:735, 1/5/927:937 | No text annotation Not in a motif group | ||
| IL_6P5N_122 | 1/5/737:739, 1/5/924:925 | No text annotation Not in a motif group | ||
| IL_6P5N_123 | 1/5/740:742, 1/5/922:923 | Single stack bend Not in a motif group | geometric IL_7A0S_054 IL_04038.4 | |
| IL_6P5N_124 | 1/5/742:743, 1/5/920:922 | Single stack bend Not in a motif group | geometric IL_5J7L_044 IL_04038.4 | |
| IL_6P5N_125 | 1/5/743:752, 1/5/910:920 | No text annotation Not in a motif group | ||
| IL_6P5N_126 | 1/5/1074:1076, 1/5/1235:1236 | Single stack bend Not in a motif group | geometric IL_5TBW_070 IL_72766.2 | |
| IL_6P5N_127 | 1/5/1077:1080, 1/5/1219:1234 | No text annotation Not in a motif group | ||
| IL_6P5N_128 | 1/5/1082:1084, 1/5/1213:1217 | Isolated cWH basepair Not in a motif group | geometric IL_4J50_001 IL_01312.13 | |
| IL_6P5N_129 | 1/5/1086:1087, 1/5/1209:1211 | Single bulged C Not in a motif group | geometric IL_3SNP_003 IL_61258.10 | |
| IL_6P5N_130 | 1/5/1095:1169, 1/5/1192:1201 | No text annotation Not in a motif group | ||
| IL_6P5N_131 | 1/5/1172:1177, 1/5/1184:1189 | No text annotation Not in a motif group | ||
| IL_6P5N_132 | 1/5/1357:1360, 1/5/1379:1382 | No text annotation Not in a motif group | ||
| IL_6P5N_133 | 1/5/1360:1361, 1/5/1376:1379 | Major groove outside cWW, minor groove, intercalation pocket Not in a motif group | geometric IL_1U9S_003 IL_13730.12 | |
| IL_6P5N_134 | 1/5/1425:1429, 1/5/1455:1460 | Triple sheared related Not in a motif group | geometric IL_4V9F_018 IL_64879.1 | |
| IL_6P5N_135 | 1/5/1431:1434, 1/5/1450:1453 | Double sheared Not in a motif group | geometric IL_4KZD_002 IL_09705.7 | |
| IL_6P5N_136 | 1/5/1467:1468, 1/5/1496:1498 | Single bulged A Not in a motif group | homologous IL_5TBW_024 IL_80007.16 | |
| IL_6P5N_137 | 1/5/1474:1476, 1/5/1489:1490 | Single base bend Not in a motif group | geometric IL_5IBB_340 IL_83121.7 | |
| IL_6P5N_138 | 1/5/1520:1522, 1/5/1655:1657 | No text annotation Not in a motif group | homologous IL_5TBW_027 IL_01312.13 | |
| IL_6P5N_139 | 1/5/1522:1526, 1/5/1648:1655 | No text annotation Not in a motif group | geometric IL_5TBW_028 IL_17470.5 | |
| IL_6P5N_140 | 1/5/1550:1551, 1/5/1576:1578 | Single bulged G Not in a motif group | geometric IL_4V9F_026 IL_59137.10 | |
| IL_6P5N_141 | 1/5/1551:1555, 1/5/1572:1576 | Triple sheared Not in a motif group | homologous IL_5TBW_030 IL_56467.6 | |
| IL_6P5N_142 | 1/5/1586:1589, 1/5/1605:1607 | Major groove platform with extra cWW Not in a motif group | homologous IL_5TBW_031 IL_95485.6 | |
| IL_6P5N_143 | 1/5/1590:1592, 1/5/1603:1604 | Single bulged U Not in a motif group | homologous IL_5TBW_032 IL_83039.11 | |
| IL_6P5N_144 | 1/5/1624:1626, 1/5/1636:1640 | Multiple bulged bases Not in a motif group | homologous IL_5TBW_033 IL_90991.5 | |
| IL_6P5N_145 | 1/5/1671:1673, 1/5/1682:1684 | No text annotation Not in a motif group | homologous IL_5TBW_034 IL_01312.13 | |
| IL_6P5N_146 | 1/5/1686:1688, 1/5/1848:1851 | No text annotation Not in a motif group | ||
| IL_6P5N_147 | 1/5/1694:1721, 1/5/1841:1842 | No text annotation Not in a motif group | ||
| IL_6P5N_148 | 1/5/1723:1725, 1/5/1838:1839 | Single bulged G Not in a motif group | homologous IL_5TBW_037 IL_59137.10 | |
| IL_6P5N_149 | 1/5/1732:1737, 1/5/1792:1797 | 5x5 Sarcin-Ricin with intercalated A; G-bulge Not in a motif group | geometric IL_7A0S_027 IL_89193.1 | |
| IL_6P5N_150 | 1/5/1737:1738, 1/5/1790:1792 | Minor groove platform Not in a motif group | geometric IL_5TBW_039 IL_06437.11 | |
| IL_6P5N_151 | 1/5/1739:1744, 1/5/1786:1789 | C-loop Not in a motif group | homologous IL_5TBW_040 IL_63596.4 | |
| IL_6P5N_152 | 1/5/1746:1749, 1/5/1781:1784 | Tandem non-canonical cWW pairs Not in a motif group | homologous IL_5TBW_041 IL_85877.10 | |
| IL_6P5N_153 | 1/5/1749:1751, 1/5/1779:1781 | No text annotation Not in a motif group | geometric IL_5TBW_127 IL_01312.13 | |
| IL_6P5N_154 | 1/5/1753:1758, 1/5/1774:1777 | No text annotation Not in a motif group | ||
| IL_6P5N_155 | 1/5/1814:1816, 1/5/1823:1824 | Single bulged A Not in a motif group | homologous IL_5TBW_045 IL_80007.16 | |
| IL_6P5N_156 | 1/5/1858:1860, 1/5/1874:1876 | No text annotation Not in a motif group | homologous IL_5TBW_046 IL_01312.13 | |
| IL_6P5N_157 | 1/5/1905:1909, 1/5/2067:2071 | UAA/GAN Not in a motif group | homologous IL_5TBW_048 IL_53523.5 | |
| IL_6P5N_158 | 1/5/1911:1918, 1/5/2064:2065 | SSU/LSU pseudoknot Not in a motif group | homologous IL_5TBW_049 IL_15861.6 | |
| IL_6P5N_159 | 1/5/1918:1920, 1/5/2063:2064 | No text annotation Not in a motif group | ||
| IL_6P5N_160 | 1/5/1920:1922, 1/5/2062:2063 | No text annotation Not in a motif group | ||
| IL_6P5N_161 | 1/5/1926:1933, 1/5/2053:2058 | No text annotation Not in a motif group | geometric IL_5TBW_051 IL_17971.1 | |
| IL_6P5N_162 | 1/5/1933:1944, 1/5/2038:2053 | No text annotation Not in a motif group | homologous IL_5TBW_052 IL_94878.1 | |
| IL_6P5N_163 | 1/5/1946:1948, 1/5/2035:2036 | Single bulged U Not in a motif group | homologous IL_5TBW_053 IL_83039.11 | |
| IL_6P5N_164 | 1/5/1972:1977, 1/5/1989:1994 | No text annotation Not in a motif group | ||
| IL_6P5N_165 | 1/5/2001:2005, 1/5/2014:2016 | No text annotation Not in a motif group | ||
| IL_6P5N_166 | 1/5/2083:2085, 1/5/2272:2273 | Single bulged U Not in a motif group | geometric IL_4LFB_046 IL_83039.11 | |
| IL_6P5N_167 | 1/5/2290:2292, 1/5/2342:2345 | Isolated cWS basepair Not in a motif group | homologous IL_5TBW_057 IL_01312.13 | |
| IL_6P5N_168 | 1/5/2299:2301, 1/5/2334:2335 | Single bulged A Not in a motif group | homologous IL_5TBW_058 IL_80007.16 | |
| IL_6P5N_169 | 1/5/2302:2309, 1/5/2329:2333 | Kink-turn Not in a motif group | homologous IL_5TBW_059 IL_29549.9 | |
| IL_6P5N_170 | 1/5/2312:2314, 1/5/2325:2326 | Single bulged A Not in a motif group | homologous IL_5TBW_060 IL_80007.16 | |
| IL_6P5N_171 | 1/5/2358:2364, 1/5/3858:3863 | 7x6 Sarcin-Ricin; G-bulge Not in a motif group | homologous IL_5TBW_061 IL_35110.5 | |
| IL_6P5N_172 | 1/5/2415:2419, 1/5/2427:2429 | C-loop Not in a motif group | geometric IL_7A0S_047 IL_63596.4 | |
| IL_6P5N_173 | 1/5/2446:2450, 1/5/2509:2514 | UAA/GAN Not in a motif group | homologous IL_5TBW_063 IL_53523.5 | |
| IL_6P5N_174 | 1/5/2542:2547, 1/5/2772:2774 | Isolated non-canonical cWW with bulges Not in a motif group | geometric IL_5J7L_009 IL_55456.1 | |
| IL_6P5N_175 | 1/5/2549:2550, 1/5/2768:2770 | Single bulged U Not in a motif group | geometric IL_2R8S_004 IL_83039.11 | |
| IL_6P5N_176 | 1/5/2589:2593, 1/5/2752:2756 | Triple sheared Not in a motif group | geometric IL_7RQB_075 IL_56467.6 | |
| IL_6P5N_177 | 1/5/2613:2614, 1/5/2724:2726 | Single bulged C Not in a motif group | homologous IL_5TBW_069 IL_61258.10 | |
| IL_6P5N_178 | 1/5/2614:2615, 1/5/2722:2724 | Single stack bend Not in a motif group | geometric IL_5TBW_070 IL_72766.2 | |
| IL_6P5N_179 | 1/5/2646:2648, 1/5/2685:2688 | Isolated tHS basepair with bulges Not in a motif group | geometric IL_7RQB_012 IL_38958.6 | |
| IL_6P5N_180 | 1/5/2651:2653, 1/5/2681:2682 | Single bulged G Not in a motif group | geometric IL_2IZN_001 IL_59137.10 | |
| IL_6P5N_181 | 1/5/2655:2662, 1/5/2672:2679 | No text annotation Not in a motif group | ||
| IL_6P5N_182 | 1/5/2704:2705, 1/5/2710:2712 | Single bulged G Not in a motif group | geometric IL_4LVW_002 IL_59137.10 | |
| IL_6P5N_183 | 1/5/2832:2838, 1/5/3850:3853 | No text annotation Not in a motif group | homologous IL_5TBW_074 IL_79393.8 | |
| IL_6P5N_184 | 1/5/2844:2846, 1/5/3842:3844 | Isolated tWW turn Not in a motif group | homologous IL_5TBW_075 IL_54997.5 | |
| IL_6P5N_185 | 1/5/2847:2850, 1/5/3840:3841 | Major groove platform; stack outside cWW Not in a motif group | homologous IL_5TBW_076 IL_80663.10 | |
| IL_6P5N_186 | 1/5/2850:2855, 1/5/3837:3840 | Intercalated tWH Not in a motif group | geometric IL_4V9F_062 IL_01312.13 | |
| IL_6P5N_187 | 1/5/2867:2872, 1/5/2877:2883 | tSH-tSH-tHH-tHS Not in a motif group | geometric IL_4V9F_063 IL_66584.5 | |
| IL_6P5N_188 | 1/5/2889:2891, 1/5/3610:3612 | No text annotation Not in a motif group | homologous IL_5TBW_079 IL_01312.13 | |
| IL_6P5N_189 | 1/5/2896:2897, 1/5/3602:3605 | No text annotation Not in a motif group | homologous IL_5TBW_080 IL_76195.1 | |
| IL_6P5N_190 | 1/5/3632:3633, 1/5/3827:3829 | Single bulged A Not in a motif group | homologous IL_5TBW_082 IL_80007.16 | |
| IL_6P5N_191 | 1/5/3660:3665, 1/5/3677:3684 | Kink-turn related Not in a motif group | homologous IL_5TBW_083 IL_95993.1 | |
| IL_6P5N_192 | 1/5/3700:3703, 1/5/3749:3750 | Major groove outside cWW, minor groove, intercalation pocket Not in a motif group | homologous IL_5TBW_084 IL_72766.2 | |
| IL_6P5N_193 | 1/5/3704:3705, 1/5/3745:3748 | Major groove outside cWW, minor groove, intercalation pocket Not in a motif group | homologous IL_5TBW_085 IL_13730.12 | |
| IL_6P5N_194 | 1/5/3708:3710, 1/5/3741:3742 | Single stack bend Not in a motif group | geometric IL_5TBW_070 IL_72766.2 | |
| IL_6P5N_195 | 1/5/3710:3714, 1/5/3739:3741 | No text annotation Not in a motif group | ||
| IL_6P5N_196 | 1/5/3715:3721, 1/5/3732:3738 | No text annotation Not in a motif group | homologous IL_5TBW_088 IL_36973.5 | |
| IL_6P5N_197 | 1/5/3780:3781, 1/5/3811:3814 | No text annotation Not in a motif group | geometric IL_4V9F_070 IL_69632.1 | |
| IL_6P5N_198 | 1/5/3781:3792, 1/5/3808:3811 | No text annotation Not in a motif group | homologous IL_5TBW_090 IL_45481.1 | |
| IL_6P5N_199 | 1/5/3895:3898, 1/5/4563:4565 | Major groove platform with extra pair Not in a motif group | homologous IL_5TBW_091 IL_87630.5 | |
| IL_6P5N_200 | 1/5/3900:3902, 1/5/4558:4561 | Minor groove platform with intercalation Not in a motif group | homologous IL_5TBW_092 IL_86964.1 | |
| IL_6P5N_201 | 1/5/3913:3915, 1/5/4388:4389 | Single bulged U Not in a motif group | homologous IL_5TBW_093 IL_83039.11 | |
| IL_6P5N_202 | 1/5/3916:3917, 1/5/4384:4387 | Minor groove platform Not in a motif group | homologous IL_5TBW_094 IL_06437.11 | |
| IL_6P5N_203 | 1/5/3927:3929, 1/5/4181:4184 | Isolated tHS basepair with bulges Not in a motif group | homologous IL_5TBW_095 IL_38958.6 | |
| IL_6P5N_204 | 1/5/3948:3953, 1/5/4059:4065 | Tandem non-canonical cWW pairs with near WC pairs Not in a motif group | geometric IL_4EYA_005 IL_76308.3 | |
| IL_6P5N_205 | 1/5/3954:3968, 1/5/4053:4058 | No text annotation Not in a motif group | ||
| IL_6P5N_206 | 1/5/3968:3976, 1/5/4035:4053 | No text annotation Not in a motif group | ||
| IL_6P5N_207 | 1/5/4082:4088, 1/5/4161:4164 | No text annotation Not in a motif group | homologous IL_5TBW_096 IL_98353.1 | |
| IL_6P5N_208 | 1/5/4191:4192, 1/5/4202:4204 | Single bulged A Not in a motif group | homologous IL_5TBW_098 IL_80007.16 | |
| IL_6P5N_209 | 1/5/4243:4245, 1/5/4263:4267 | Isolated tHS basepair with bulges Not in a motif group | homologous IL_5TBW_099 IL_38958.6 | |
| IL_6P5N_210 | 1/5/4291:4293, 1/5/4317:4318 | Single bulged A Not in a motif group | geometric IL_5WWT_001 IL_80007.16 | |
| IL_6P5N_211 | 1/5/4295:4298, 1/5/4312:4315 | Tandem non-canonical cWW pairs Not in a motif group | homologous IL_5TBW_100 IL_85877.10 | |
| IL_6P5N_212 | 1/5/4347:4350, 1/5/4364:4365 | Single stack bend Not in a motif group | geometric IL_5J7L_032 IL_04038.4 | |
| IL_6P5N_213 | 1/5/4400:4401, 1/5/4442:4444 | Major groove platform Not in |