Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
HL_6P5N_0011/1/6444:6460No text annotation
HL_6P5N_0021/1/6497:6502Mini UNCG
geometric
HL_5U30_001
HL_48778.2
HL_6P5N_0031/1/6521:6527No text annotation
HL_6P5N_0041/1/6560:6569No text annotation
geometric
HL_4V83_139
NA
HL_6P5N_0051/1/6584:6591No text annotation
HL_6P5N_0061/2/7:17No text annotation
homologous
HL_4V88_186
NA
HL_6P5N_0071/2/69:80No text annotation
geometric
HL_2ZZM_002
HL_13963.3
HL_6P5N_0081/2/156:162GNRA related
homologous
HL_4V88_188
NA
HL_6P5N_1241/2/194:205No text annotation
HL_6P5N_0091/2/195:203No text annotation
HL_6P5N_0101/2/288:295T-loop with 1 bulged base
homologous
HL_4V88_191
NA
HL_6P5N_0121/2/377:387No text annotation
HL_6P5N_0131/2/416:421No text annotation
homologous
HL_4V88_194
NA
HL_6P5N_0141/2/441:452No text annotation
homologous
HL_4V88_195
NA
HL_6P5N_0151/2/462:467UNCG
homologous
HL_4V88_196
NA
HL_6P5N_0161/2/498:504No text annotation
homologous
HL_4V88_197
NA
HL_6P5N_0171/2/539:544No text annotation
homologous
HL_4V88_198
NA
HL_6P5N_0181/2/569:581No text annotation
geometric
HL_4V88_199
NA
HL_6P5N_0191/2/618:623GNRA variation
homologous
HL_4V88_200
NA
HL_6P5N_0221/2/820:828No text annotation
homologous
HL_4V88_203
NA
HL_6P5N_1251/2/885:901No text annotation
HL_6P5N_1301/2/957:966No text annotation
homologous
HL_8CRE_210
HL_75293.5
HL_6P5N_0261/2/994:999GNRA
homologous
HL_4V88_207
NA
HL_6P5N_0271/2/1054:1064No text annotation
homologous
HL_4V88_208
NA
HL_6P5N_0281/2/1113:1120No text annotation
geometric
HL_7A0S_011
HL_75660.5
HL_6P5N_0291/2/1141:1146GNRA
homologous
HL_4V88_210
NA
HL_6P5N_0301/2/1178:1183GNRA
homologous
HL_4V88_211
NA
HL_6P5N_0311/2/1245:1254No text annotation
homologous
HL_4V88_212
NA
HL_6P5N_0321/2/1294:1305No text annotation
HL_6P5N_0331/2/1353:1358GNRA
homologous
HL_4V88_214
NA
HL_6P5N_0341/2/1366:1373No text annotation
homologous
HL_4V88_215
NA
HL_6P5N_0361/2/1460:1466UNCG variation
geometric
HL_2CZJ_007
NA
HL_6P5N_0371/2/1565:1570GNRA
homologous
HL_4V88_218
NA
HL_6P5N_0381/2/1613:1626No text annotation
HL_6P5N_0391/2/1658:1666No text annotation
homologous
HL_4V88_220
NA
HL_6P5N_0411/2/1847:1852GNRA variation
homologous
HL_4V88_222
NA
HL_6P5N_0421/5/37:44No text annotation
geometric
HL_5TBW_001
NA
HL_6P5N_0431/5/68:73No text annotation
homologous
HL_5TBW_002
NA
HL_6P5N_0441/5/89:95No text annotation
homologous
HL_5TBW_003
NA
HL_6P5N_0451/5/130:138No text annotation
HL_6P5N_0461/5/204:211T-loop with 2 stacked bulged bases
homologous
HL_8C3A_005
NA
HL_6P5N_0471/5/222:226No text annotation
homologous
HL_8C3A_006
NA
HL_6P5N_0481/5/230:238T-loop with unstacked turn
homologous
HL_8C3A_007
NA
HL_6P5N_0491/5/289:298No text annotation
homologous
HL_5TBW_008
NA
HL_6P5N_0501/5/314:323Pseudoknot geometry
homologous
HL_8C3A_009
NA
HL_6P5N_0511/5/368:373GNRA
homologous
HL_8C3A_010
NA
HL_6P5N_0521/5/393:398GNRA
homologous
HL_8C3A_011
NA
HL_6P5N_0531/5/521:641Externally structured
geometric
HL_8C3A_022
NA
HL_6P5N_0541/5/756:906No text annotation
geometric
HL_8KAH_003
NA
HL_6P5N_0551/5/962:970No text annotation
geometric
HL_2Y9H_003
HL_75660.5
HL_6P5N_1261/5/990:1065No text annotation
geometric
HL_2ZZM_002
HL_13963.3
HL_6P5N_0561/5/1177:1184No text annotation
geometric
HL_4WF9_003
HL_75660.5
HL_6P5N_0571/5/1317:1326T-loop with 2 stacked bulged bases
homologous
HL_8C3A_014
NA
HL_6P5N_0581/5/1363:1374No text annotation
geometric
HL_2ZZM_002
HL_13963.3
HL_6P5N_0591/5/1389:1394GNRA
homologous
HL_5TBW_016
NA
HL_6P5N_0601/5/1404:1413No text annotation
geometric
HL_5TBW_006
NA
HL_6P5N_0611/5/1436:1448No text annotation
geometric
HL_2Y8W_001
HL_81100.2
HL_6P5N_0621/5/1479:1486Other HL
geometric
HL_5J7L_200
HL_08100.1
HL_6P5N_0631/5/1561:1566GNRA
homologous
HL_5TBW_019
NA
HL_6P5N_0641/5/1593:1602No text annotation
homologous
HL_5TBW_020
NA
HL_6P5N_0651/5/1627:1635No text annotation
homologous
HL_5TBW_021
NA
HL_6P5N_0661/5/1675:1680Externally structured
homologous
HL_8C3A_022
NA
HL_6P5N_1311/5/1760:1772No text annotation
HL_6P5N_0681/5/1816:1823No text annotation
homologous
HL_8C3A_024
NA
HL_6P5N_0691/5/1864:1870GNRA
homologous
HL_8C3A_025
NA
HL_6P5N_0701/5/1886:1893No text annotation
homologous
HL_5TBW_026
NA
HL_6P5N_1271/5/1972:1994No text annotation
HL_6P5N_0711/5/1978:1988No text annotation
HL_6P5N_0721/5/2005:2014No text annotation
geometric
HL_5U3G_001
HL_75660.5
HL_6P5N_0731/5/2087:2270No text annotation
HL_6P5N_0741/5/2317:2322GNRA
homologous
HL_5TBW_030
NA
HL_6P5N_0751/5/2376:2384T-loop with 2 stacked bulged bases
homologous
HL_8C3A_031
NA
HL_6P5N_0761/5/2420:2426Pseudoknot geometry with 3' bulge
homologous
HL_5TBW_032
NA
HL_6P5N_0771/5/2458:2463GNRA variation
homologous
HL_5TBW_033
NA
HL_6P5N_1321/5/2487:2491No text annotation
HL_6P5N_0791/5/2523:2532No text annotation
homologous
HL_5TBW_035
NA
HL_6P5N_0801/5/2561:2566GNRA related
geometric
HL_3OXE_002
HL_04783.2
HL_6P5N_0811/5/2578:2583GNRA
homologous
HL_8C3A_036
NA
HL_6P5N_0821/5/2624:2632No text annotation
homologous
HL_8C3A_037
NA
HL_6P5N_0831/5/2664:2670No text annotation
homologous
HL_8C3A_038
NA
HL_6P5N_0841/5/2705:2710No text annotation
geometric
HL_5NFV_001
HL_69752.2
HL_6P5N_0851/5/2738:2742No text annotation
homologous
HL_8C3A_040
NA
HL_6P5N_0861/5/2792:2799No text annotation
homologous
HL_5TBW_041
NA
HL_6P5N_0871/5/2810:2816GNRA
homologous
HL_5TBW_042
NA
HL_6P5N_0881/5/2872:2877UNCG
homologous
HL_8C3A_043
NA
HL_6P5N_0891/5/2901:3598No text annotation
HL_6P5N_0901/5/3614:3618No text annotation
homologous
HL_8C3A_045
NA
HL_6P5N_0911/5/3639:3649No text annotation
homologous
HL_5TBW_046
NA
HL_6P5N_0921/5/3668:3674GNRA
homologous
HL_8C3A_047
NA
HL_6P5N_0931/5/3724:3729GNRA
homologous
HL_5TBW_048
NA
HL_6P5N_0941/5/3757:3767No text annotation
homologous
HL_5TBW_049
NA
HL_6P5N_0951/5/3796:3804No text annotation
homologous
HL_8C3A_050
NA
HL_6P5N_0961/5/3873:3882No text annotation
homologous
HL_8C3A_051
NA
HL_6P5N_0971/5/3976:4035No text annotation
geometric
HL_5NFV_001
HL_69752.2
HL_6P5N_0981/5/4100:4109No text annotation
HL_6P5N_1331/5/4135:4149No text annotation
HL_6P5N_1001/5/4193:4201No text annotation
homologous
HL_5TBW_054
NA
HL_6P5N_1011/5/4210:4222No text annotation
homologous
HL_5TBW_055
NA
HL_6P5N_1021/5/4250:4258No text annotation
homologous
HL_8C3A_057
NA
HL_6P5N_1031/5/4270:4277Pseudoknot geometry
homologous
HL_5TBW_057
NA
HL_6P5N_1041/5/4301:4309No text annotation
homologous
HL_8C3A_059
NA
HL_6P5N_1051/5/4321:4326GNRA
homologous
HL_5TBW_059
NA
HL_6P5N_1061/5/4352:4362No text annotation
geometric
HL_2ZZM_002
HL_13963.3
HL_6P5N_1071/5/4417:4425No text annotation
homologous
HL_5TBW_061
NA
HL_6P5N_1081/5/4474:4481No text annotation
homologous
HL_5TBW_062
NA
HL_6P5N_1091/5/4497:4503No text annotation
geometric
HL_5TBW_063
NA
HL_6P5N_1101/5/4540:4545GNRA
homologous
HL_5TBW_064
NA
HL_6P5N_1111/5/4603:4608GNRA
geometric
HL_5TBW_065
NA
HL_6P5N_1121/5/4646:4651Ribsomal LSU H95
homologous
HL_8C3A_067
NA
HL_6P5N_1131/5/4688:4702No text annotation
homologous
HL_8C3A_068
NA
HL_6P5N_1141/5/4775:4860No text annotation
geometric
HL_5U3G_001
HL_75660.5
HL_6P5N_1151/5/4904:4918No text annotation
HL_6P5N_1161/5/4975:4983No text annotation
geometric
HL_5J7L_201
HL_64690.6
HL_6P5N_1281/5/5021:5028No text annotation
geometric
HL_7KI3_001
HL_75660.5
HL_6P5N_1291/7/32:45No text annotation
homologous
HL_8C3A_228
NA
HL_6P5N_1181/7/36:41No text annotation
homologous
HL_5TBW_185
NA
HL_6P5N_1191/7/86:91GNRA
homologous
HL_5TBW_186
NA
HL_6P5N_1201/8/47:56No text annotation
geometric
HL_7RQB_001
NA
HL_6P5N_1221/8/107:112No text annotation
homologous
HL_5TBW_075
NA
HL_6P5N_1231/8/121:129No text annotation

Problematic loops

#loop idProblemSequence
HL_6P5N_011Mini UNCG
HL_6P5N_020No text annotation
HL_6P5N_021No text annotation
HL_6P5N_023No text annotation
HL_6P5N_024No text annotation
HL_6P5N_025No text annotation
HL_6P5N_035Mini UNCG
HL_6P5N_040No text annotation
HL_6P5N_067No text annotation
HL_6P5N_078No text annotation
HL_6P5N_099No text annotation
HL_6P5N_117No text annotation
HL_6P5N_121No text annotation

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
IL_6P5N_2571/1/6425:6437,
1/1/6467:6475
No text annotation
IL_6P5N_0011/1/6491:6494,
1/1/6505:6513
No text annotation
IL_6P5N_0021/1/6558:6560,
1/1/6569:6572
No text annotation
geometric
IL_4P3T_002
NA
IL_6P5N_0031/2/23:25,
1/2/649:651
Isolated non-canonical cWW pair
geometric
IL_4M4O_001
IL_87907.2
IL_6P5N_0041/2/34:36,
1/2/519:521
Isolated non-canonical cWW pair
homologous
IL_4V88_385
NA
IL_6P5N_0051/2/37:40,
1/2/514:518
Double sheared
geometric
IL_4WF9_016
IL_09705.15
IL_6P5N_0061/2/41:47,
1/2/479:481
No text annotation
homologous
IL_4V88_387
NA
IL_6P5N_0071/2/49:51,
1/2/476:477
Minor groove platform
homologous
IL_4V88_388
NA
IL_6P5N_0081/2/56:62,
1/2/86:89
Other IL
geometric
IL_5TBW_043
NA
IL_6P5N_0091/2/63:68,
1/2/81:85
No text annotation
homologous
IL_4V88_390
NA
IL_6P5N_0101/2/108:110,
1/2/351:353
Isolated non-canonical cWW pair
geometric
IL_2O3V_001
IL_28037.2
IL_6P5N_2581/2/108:112,
1/2/349:353
Partly complementary
geometric
IL_7VYX_008
IL_49751.4
IL_6P5N_0111/2/110:112,
1/2/349:351
Isolated non-canonical cWW pair
geometric
IL_4WF9_020
IL_87907.2
IL_6P5N_0121/2/112:115,
1/2/348:349
Multiple bulged bases
homologous
IL_4V88_392
NA
IL_6P5N_0131/2/116:121,
1/2/343:347
No text annotation
homologous
IL_4V88_393
NA
IL_6P5N_0141/2/123:125,
1/2/338:341
Isolated non-canonical cWW pair
geometric
IL_1U6B_001
IL_57744.1
IL_6P5N_0151/2/144:151,
1/2/167:175
No text annotation
IL_6P5N_0161/2/152:154,
1/2/164:166
Isolated cWH basepair
geometric
IL_6RA4_002
IL_10167.6
IL_6P5N_0171/2/188:192,
1/2/207:211
Triple sheared
geometric
IL_4WFL_001
IL_17948.2
IL_6P5N_0181/2/194:195,
1/2/203:205
Single stack bend
geometric
IL_6FZ0_001
IL_90729.1
IL_6P5N_0201/2/312:314,
1/2/336:337
Single bulged A
homologous
IL_4V88_399
NA
IL_6P5N_0211/2/317:320,
1/2/331:333
No text annotation
homologous
IL_4V88_400
NA
IL_6P5N_0221/2/359:364,
1/2/396:403
Kink-turn with non-sequential stacking
homologous
IL_4V88_402
NA
IL_6P5N_0231/2/366:371,
1/2/393:394
No text annotation
geometric
IL_5Y58_001
IL_59877.1
IL_6P5N_0241/2/411:413,
1/2/424:429
No text annotation
homologous
IL_4V88_404
NA
IL_6P5N_0251/2/437:439,
1/2/454:456
Isolated cWH basepair
homologous
IL_4V88_405
NA
IL_6P5N_0261/2/459:461,
1/2/468:470
Isolated near basepair
homologous
IL_4V88_406
NA
IL_6P5N_0271/2/487:489,
1/2/511:512
Single bulged U
homologous
IL_4V88_407
NA
IL_6P5N_2831/2/491:495,
1/2/508:509
No text annotation
homologous
IL_8CRE_414
IL_03109.3
IL_6P5N_2841/2/495:496,
1/2/506:508
Single bulged G
homologous
IL_8P9A_398
IL_00225.14
IL_6P5N_0291/2/529:532,
1/2/552:556
No text annotation
geometric
IL_7MLW_007
IL_99358.1
IL_6P5N_0301/2/533:538,
1/2/545:551
No text annotation
IL_6P5N_0311/2/563:565,
1/2/585:592
No text annotation
homologous
IL_8C3A_420
NA
IL_6P5N_0321/2/566:569,
1/2/581:584
tSH-tHW
geometric
IL_5UNE_005
IL_85033.2
IL_6P5N_0331/2/599:608,
1/2/635:637
No text annotation
IL_6P5N_0341/2/611:617,
1/2/624:632
Kink-turn related
homologous
IL_4V88_415
NA
IL_6P5N_0351/2/663:665,
1/2/1162:1164
Isolated non-canonical cWW pair
geometric
IL_1Y27_001
IL_87907.2
IL_6P5N_0361/2/665:671,
1/2/1161:1162
No text annotation
geometric
IL_4LFB_022
IL_38186.6
IL_6P5N_0371/2/673:675,
1/2/1030:1032
Isolated non-canonical cWW pair
homologous
IL_4V88_417
NA
IL_6P5N_0381/2/676:680,
1/2/1025:1029
tSH-tHW-tHS
homologous
IL_4V88_418
NA
IL_6P5N_0391/2/692:694,
1/2/733:735
No text annotation
IL_6P5N_0401/2/802:803,
1/2/860:863
Major groove minor groove platform; mini C-loop
homologous
IL_4V88_423
NA
IL_6P5N_0411/2/805:807,
1/2/856:858
Isolated non-canonical cWW pair
homologous
IL_4V88_424
NA
IL_6P5N_0421/2/807:815,
1/2/849:856
No text annotation
geometric
IL_4V88_425
NA
IL_6P5N_0431/2/874:876,
1/2/910:912
No text annotation
geometric
IL_4V8Q_188
NA
IL_6P5N_0441/2/877:879,
1/2/907:909
Isolated non-canonical cWW pair
geometric
IL_3DIL_006
IL_87907.2
IL_6P5N_0451/2/922:923,
1/2/1019:1022
Major groove platform; stack outside cWW
homologous
IL_4V88_428
NA
IL_6P5N_2601/2/925:926,
1/2/1015:1017
Single bulged U
geometric
IL_3NDB_005
IL_89505.4
IL_6P5N_0471/2/928:931,
1/2/1010:1013
Tandem non-canonical cWW pairs
homologous
IL_4V88_430
NA
IL_6P5N_2611/2/928:935,
1/2/1007:1013
No text annotation
IL_6P5N_0481/2/931:935,
1/2/1007:1010
Tandem non-canonical cWW pairs
geometric
IL_4V88_431
NA
IL_6P5N_2851/2/942:945,
1/2/981:984
No text annotation
homologous
IL_8P9A_421
IL_85033.2
IL_6P5N_0501/2/952:956,
1/2/967:974
Kink-turn
homologous
IL_4V88_434
NA
IL_6P5N_0511/2/1042:1047,
1/2/1071:1073
Other IL
geometric
IL_4V88_435
NA
IL_6P5N_0521/2/1047:1051,
1/2/1067:1071
tSH-tHW-tHS
homologous
IL_4V88_436
NA
IL_6P5N_0531/2/1091:1093,
1/2/1152:1158
No text annotation
homologous
IL_4V88_437
NA
IL_6P5N_0541/2/1098:1101,
1/2/1131:1134
Tandem non-canonical cWW pairs
geometric
IL_4V88_438
NA
IL_6P5N_0551/2/1101:1103,
1/2/1129:1131
Isolated non-canonical cWW pair
geometric
IL_4WF9_083
IL_87907.2
IL_6P5N_0561/2/1108:1110,
1/2/1123:1124
Minor groove platform
geometric
IL_4V88_412
NA
IL_6P5N_0571/2/1168:1175,
1/2/1186:1191
8x6 Sarcin-Ricin with inserted Y; G-bulge
homologous
IL_4V88_440
NA
IL_6P5N_0581/2/1203:1204,
1/2/1694:1696
Single bulged A
homologous
IL_4V88_441
NA
IL_6P5N_0591/2/1206:1208,
1/2/1691:1692
Single bulged G
homologous
IL_4V88_442
NA
IL_6P5N_0601/2/1214:1217,
1/2/1681:1685
C-loop
homologous
IL_4V88_443
NA
IL_6P5N_0611/2/1230:1232,
1/2/1526:1528
Isolated non-canonical cWW pair
homologous
IL_4V88_444
NA
IL_6P5N_0621/2/1235:1236,
1/2/1521:1523
Minor groove platform
homologous
IL_4V88_445
NA
IL_6P5N_0631/2/1270:1272,
1/2/1510:1512
Isolated non-canonical cWW pair
geometric
IL_3MEI_002
IL_87907.2
IL_6P5N_2621/2/1277:1294,
1/2/1305:1320
No text annotation
IL_6P5N_0641/2/1325:1327,
1/2/1502:1503
Single bulged U
homologous
IL_4V88_449
NA
IL_6P5N_2631/2/1329:1335,
1/2/1492:1500
No text annotation
homologous
IL_8P9A_439
IL_86012.1
IL_6P5N_0661/2/1337:1338,
1/2/1488:1490
Single bulged A
homologous
IL_4V88_452
NA
IL_6P5N_0671/2/1347:1349,
1/2/1380:1382
Isolated cWH basepair
homologous
IL_4V88_453
NA
IL_6P5N_0681/2/1363:1365,
1/2/1374:1375
Minor groove platform
geometric
IL_4V88_454
NA
IL_6P5N_0691/2/1395:1402,
1/2/1444:1450
No text annotation
IL_6P5N_0701/2/1402:1405,
1/2/1441:1444
Minor groove platform
homologous
IL_4V88_456
NA
IL_6P5N_0711/2/1412:1413,
1/2/1427:1429
Single bulged G
geometric
IL_5J7L_019
IL_00225.14
IL_6P5N_0721/2/1537:1539,
1/2/1594:1596
Isolated non-canonical cWW pair
geometric
IL_3SZX_002
IL_87907.2
IL_6P5N_2641/2/1541:1550,
1/2/1582:1592
No text annotation
IL_6P5N_0731/2/1550:1558,
1/2/1577:1582
180 degree turn
geometric
IL_5J7L_055
IL_11344.2
IL_6P5N_0741/2/1560:1562,
1/2/1573:1575
Isolated non-canonical cWW pair
geometric
IL_5AOX_001
IL_87907.2
IL_6P5N_0751/2/1604:1610,
1/2/1629:1635
No text annotation
homologous
IL_8C3A_469
NA
IL_6P5N_0761/2/1700:1702,
1/2/1833:1836
No text annotation
geometric
IL_4V88_463
NA
IL_6P5N_0771/2/1702:1705,
1/2/1829:1833
No text annotation
homologous
IL_8C3A_471
NA
IL_6P5N_0781/2/1706:1708,
1/2/1826:1828
Isolated non-canonical cWW pair
geometric
IL_5MWI_007
NA
IL_6P5N_0791/2/1708:1711,
1/2/1822:1826
No text annotation
geometric
IL_1CSL_001
IL_25872.4
IL_6P5N_0801/2/1714:1716,
1/2/1817:1819
Isolated non-canonical cWW pair
homologous
IL_4V88_467
NA
IL_6P5N_0811/2/1717:1720,
1/2/1813:1816
Double sheared
homologous
IL_4V88_468
NA
IL_6P5N_0821/2/1720:1722,
1/2/1812:1813
Single bulged U
geometric
IL_4V88_469
NA
IL_6P5N_0831/2/1729:1731,
1/2/1803:1805
Isolated non-canonical cWW pair
homologous
IL_4V88_470
NA
IL_6P5N_0841/2/1733:1736,
1/2/1798:1801
Double sheared
homologous
IL_4V88_471
NA
IL_6P5N_0851/2/1739:1741,
1/2/1793:1795
Isolated non-canonical cWW pair
geometric
IL_4E48_002
IL_87907.2
IL_6P5N_0861/2/1742:1746,
1/2/1788:1792
Triple sheared
homologous
IL_4V88_474
NA
IL_6P5N_0871/2/1750:1753,
1/2/1779:1784
No text annotation
IL_6P5N_2651/2/1753:1756,
1/2/1777:1779
No text annotation
IL_6P5N_0881/2/1754:1756,
1/2/1777:1778
Single stack bend
geometric
IL_7A0S_083
IL_26793.1
IL_6P5N_0891/5/6:7,
1/8/149:151
Single bulged C
homologous
IL_8C3A_002
NA
IL_6P5N_0901/5/12:14,
1/8/143:144
Single bulged U
homologous
IL_8C3A_003
NA
IL_6P5N_0911/5/16:18,
1/8/139:141
No text annotation
geometric
IL_3ICQ_003
NA
IL_6P5N_0921/5/26:27,
1/5/55:57
No text annotation
homologous
IL_8C3A_004
NA
IL_6P5N_0931/5/30:37,
1/5/44:52
9x8 Sarcin-Ricin; G-bulge
geometric
IL_4WF9_008
IL_84694.2
IL_6P5N_0941/5/81:88,
1/5/96:102
No text annotation
homologous
IL_8C3A_006
NA
IL_6P5N_0951/5/118:121,
1/5/152:153
Major groove intercalation
geometric
IL_1U9S_003
IL_82107.5
IL_6P5N_2661/5/118:122,
1/5/147:153
No text annotation
IL_6P5N_0961/5/121:122,
1/5/147:152
No text annotation
homologous
IL_8C3A_007
NA
IL_6P5N_0971/5/125:126,
1/5/142:144
Single bulged C
geometric
IL_1DQF_001
IL_61258.15
IL_6P5N_0981/5/168:173,
1/5/263:267
No text annotation
IL_6P5N_0991/5/178:181,
1/5/256:258
No text annotation
IL_6P5N_2861/5/182:189,
1/5/252:255
No text annotation
IL_6P5N_1011/5/195:196,
1/5/244:246
Single bulged C
geometric
IL_1DQF_001
IL_61258.15
IL_6P5N_1021/5/199:201,
1/5/214:215
Single bulged U
homologous
IL_8C3A_013
NA
IL_6P5N_1031/5/339:342,
1/8/32:33
Minor groove platform
geometric
IL_7RQB_073
NA
IL_6P5N_1041/5/348:350,
1/8/25:26
Single bulged A
homologous
IL_8C3A_014
NA
IL_6P5N_1051/5/387:390,
1/5/401:414
No text annotation
geometric
IL_5TBW_014
NA
IL_6P5N_1061/5/415:421,
1/8/13:19
Triple sheared with non-canonical cWW
homologous
IL_5TBW_015
NA
IL_6P5N_1071/5/443:446,
1/5/1300:1304
No text annotation
geometric
IL_6AZ4_001
NA
IL_6P5N_1081/5/448:450,
1/5/1297:1298
Single bulged C
geometric
IL_4C7O_003
IL_61258.15
IL_6P5N_1091/5/459:460,
1/5/695:697
Single bulged C
geometric
IL_4WF9_035
IL_61258.15
IL_6P5N_2671/5/459:464,
1/5/691:697
No text annotation
geometric
IL_5TBW_476
NA
IL_6P5N_1101/5/460:464,
1/5/691:695
No text annotation
geometric
IL_5TBW_121
NA
IL_6P5N_1111/5/466:472,
1/5/682:689
No text annotation
IL_6P5N_2681/5/480:485,
1/5/671:674
No text annotation
IL_6P5N_1131/5/487:488,
1/5/665:669
Multiple bulged bases
geometric
IL_1R3E_002
IL_84476.1
IL_6P5N_1141/5/491:493,
1/5/661:662
No text annotation
IL_6P5N_1151/5/497:500,
1/5/655:657
Isolated cWS basepair
geometric
IL_7A0S_041
IL_42997.3
IL_6P5N_1161/5/508:510,
1/5/649:650
Single bulged A
geometric
IL_6WPI_001
IL_31462.7
IL_6P5N_1171/5/517:521,
1/5/641:644
No text annotation
IL_6P5N_1181/5/709:710,
1/5/1286:1288
Single bulged G
geometric
IL_4LFB_036
IL_00225.14
IL_6P5N_1191/5/723:724,
1/5/942:945
Multiple bulged bases
geometric
IL_7V9E_001
NA
IL_6P5N_1201/5/727:731,
1/5/938:939
No text annotation
IL_6P5N_1211/5/732:735,
1/5/927:937
No text annotation
IL_6P5N_1221/5/737:739,
1/5/924:925
No text annotation
IL_6P5N_1231/5/740:742,
1/5/922:923
Single stack bend
geometric
IL_7A0S_054
IL_26793.1
IL_6P5N_1241/5/742:743,
1/5/920:922
Single stack bend
geometric
IL_5J7L_044
IL_26793.1
IL_6P5N_2691/5/742:752,
1/5/910:922
No text annotation
IL_6P5N_1251/5/743:752,
1/5/910:920
No text annotation
IL_6P5N_1261/5/1074:1076,
1/5/1235:1236
Single stack bend
geometric
IL_5TBW_070
NA
IL_6P5N_1271/5/1077:1080,
1/5/1219:1234
No text annotation
IL_6P5N_1281/5/1082:1084,
1/5/1213:1217
Isolated cWH basepair
geometric
IL_4J50_001
IL_10167.6
IL_6P5N_1291/5/1086:1087,
1/5/1209:1211
Single bulged C
geometric
IL_3SNP_003
IL_61258.15
IL_6P5N_2871/5/1093:1169,
1/5/1192:1203
No text annotation
IL_6P5N_1301/5/1095:1169,
1/5/1192:1201
No text annotation
IL_6P5N_1311/5/1172:1177,
1/5/1184:1189
No text annotation
IL_6P5N_1321/5/1357:1360,
1/5/1379:1382
No text annotation
IL_6P5N_2711/5/1357:1361,
1/5/1376:1382
No text annotation
IL_6P5N_1331/5/1360:1361,
1/5/1376:1379
Major groove intercalation
geometric
IL_1U9S_003
IL_82107.5
IL_6P5N_1341/5/1425:1429,
1/5/1455:1460
Triple sheared related
geometric
IL_4V9F_018
IL_97631.1
IL_6P5N_1351/5/1431:1434,
1/5/1450:1453
Double sheared
geometric
IL_4KZD_002
IL_09705.15
IL_6P5N_1361/5/1467:1468,
1/5/1496:1498
Single bulged A
homologous
IL_5TBW_024
NA
IL_6P5N_1371/5/1474:1476,
1/5/1489:1490
Single base bend
geometric
IL_5IBB_340
IL_90729.1
IL_6P5N_1381/5/1520:1522,
1/5/1655:1657
Isolated non-canonical cWW pair
homologous
IL_8C3A_029
NA
IL_6P5N_1391/5/1522:1526,
1/5/1648:1655
tHW-tHW cross-strand stack
geometric
IL_5TBW_028
NA
IL_6P5N_1401/5/1550:1551,
1/5/1576:1578
Single bulged G
geometric
IL_4V9F_026
IL_00225.14
IL_6P5N_1411/5/1551:1555,
1/5/1572:1576
Triple sheared
homologous
IL_8C3A_033
NA
IL_6P5N_1421/5/1586:1589,
1/5/1605:1607
Major groove platform with extra cWW
homologous
IL_8C3A_034
NA
IL_6P5N_1431/5/1590:1592,
1/5/1603:1604
Single bulged U
homologous
IL_5TBW_032
NA
IL_6P5N_1441/5/1624:1626,
1/5/1636:1640
No text annotation
homologous
IL_8C3A_036
NA
IL_6P5N_1451/5/1671:1673,
1/5/1682:1684
Isolated non-canonical cWW pair
homologous
IL_5TBW_034
NA
IL_6P5N_1461/5/1686:1688,
1/5/1848:1851
No text annotation
IL_6P5N_1471/5/1694:1721,
1/5/1841:1842
No text annotation
IL_6P5N_1481/5/1723:1725,
1/5/1838:1839
Single bulged G
homologous
IL_8C3A_040
NA
IL_6P5N_1491/5/1732:1737,
1/5/1792:1797
5x5 Sarcin-Ricin with intercalated A; G-bulge
geometric
IL_7A0S_027
NA
IL_6P5N_1501/5/1737:1738,
1/5/1790:1792
Minor groove platform
geometric
IL_5TBW_039
NA
IL_6P5N_1511/5/1739:1744,
1/5/1786:1789
C-loop with bulged stacked A's
homologous
IL_5TBW_040
NA
IL_6P5N_1521/5/1746:1749,
1/5/1781:1784
Tandem non-canonical cWW pairs
homologous
IL_5TBW_041
NA
IL_6P5N_1531/5/1749:1751,
1/5/1779:1781
Isolated non-canonical cWW pair
geometric
IL_5TBW_127
NA
IL_6P5N_2731/5/1753:1757,
1/5/1775:1777
No text annotation
IL_6P5N_1551/5/1814:1816,
1/5/1823:1824
Single bulged A
homologous
IL_5TBW_045
NA
IL_6P5N_1561/5/1858:1860,
1/5/1874:1876
Isolated non-canonical cWW pair
homologous
IL_5TBW_046
NA
IL_6P5N_1571/5/1905:1909,
1/5/2067:2071
UAA/GAN
homologous
IL_5TBW_048
NA
IL_6P5N_1581/5/1911:1918,
1/5/2064:2065
SSU/LSU pseudoknot
homologous
IL_8C3A_052
NA
IL_6P5N_1591/5/1918:1920,
1/5/2063:2064
No text annotation
IL_6P5N_1601/5/1920:1922,
1/5/2062:2063
No text annotation
IL_6P5N_1611/5/1926:1933,
1/5/2053:2058
No text annotation
geometric
IL_5TBW_051
NA
IL_6P5N_1621/5/1933:1944,
1/5/2038:2053
No text annotation
geometric
IL_5TBW_052
NA
IL_6P5N_1631/5/1946:1948,
1/5/2035:2036
Single bulged U
homologous
IL_5TBW_053
NA
IL_6P5N_1641/5/1972:1977,
1/5/1989:1994
No text annotation
IL_6P5N_1651/5/2001:2005,
1/5/2014:2016
No text annotation
homologous
IL_8P9A_284
IL_51387.3
IL_6P5N_1661/5/2083:2085,
1/5/2272:2273
Single bulged U
geometric
IL_4LFB_046
IL_89505.4
IL_6P5N_1671/5/2290:2292,
1/5/2342:2345
Isolated cWS basepair
homologous
IL_5TBW_057
NA
IL_6P5N_1681/5/2299:2301,
1/5/2334:2335
Single bulged A
homologous
IL_8C3A_062
NA
IL_6P5N_1691/5/2302:2309,
1/5/2329:2333
Kink-turn
homologous
IL_5TBW_059
NA
IL_6P5N_1701/5/2312:2314,
1/5/2325:2326
Single bulged A
homologous
IL_5TBW_060
NA
IL_6P5N_1711/5/2358:2364,
1/5/3858:3863
7x6 Sarcin-Ricin; G-bulge
homologous
IL_5TBW_061
NA
IL_6P5N_1721/5/2415:2419,
1/5/2427:2429
C-loop
geometric
IL_7A0S_047
IL_83150.2
IL_6P5N_1731/5/2446:2450,
1/5/2509:2514
UAA/GAN
homologous
IL_8C3A_067
NA
IL_6P5N_1741/5/2542:2547,
1/5/2772:2774
Isolated non-canonical cWW pair
geometric
IL_5J7L_009
IL_57744.1
IL_6P5N_1751/5/2549:2550,
1/5/2768:2770
Single bulged U
geometric
IL_2R8S_004
IL_89505.4
IL_6P5N_1761/5/2589:2593,
1/5/2752:2756
Triple sheared
geometric
IL_7RQB_075
NA
IL_6P5N_1771/5/2613:2614,
1/5/2724:2726
Single bulged C
homologous
IL_5TBW_069
NA
IL_6P5N_1781/5/2614:2615,
1/5/2722:2724
Single stack bend
geometric
IL_5TBW_070
NA
IL_6P5N_1791/5/2646:2648,
1/5/2685:2688
Isolated tHS basepair with bulges
geometric
IL_7RQB_012
NA
IL_6P5N_1801/5/2651:2653,
1/5/2681:2682
Single bulged G
geometric
IL_2IZN_001
IL_00225.14
IL_6P5N_2751/5/2656:2662,
1/5/2672:2678
No text annotation
homologous
IL_8P9A_301
IL_69543.3
IL_6P5N_1821/5/2704:2705,
1/5/2710:2712
Single bulged G
geometric
IL_4LVW_002
IL_00225.14
IL_6P5N_1831/5/2832:2838,
1/5/3850:3853
No text annotation
homologous
IL_5TBW_074
NA
IL_6P5N_1841/5/2844:2846,
1/5/3842:3844
No text annotation
homologous
IL_8C3A_081
NA
IL_6P5N_1851/5/2847:2850,
1/5/3840:3841
Major groove platform; stack outside cWW
homologous
IL_8C3A_082
NA
IL_6P5N_2761/5/2847:2855,
1/5/3837:3841
No text annotation
homologous
IL_8C3A_484
NA
IL_6P5N_1861/5/2850:2855,
1/5/3837:3840
Intercalated tWH
geometric
IL_4V9F_062
IL_76758.2
IL_6P5N_1871/5/2867:2872,
1/5/2877:2883
tSH-tSH-tHH-tHS
geometric
IL_4V9F_063
IL_47346.2
IL_6P5N_1881/5/2889:2891,
1/5/3610:3612
Isolated non-canonical cWW pair
homologous
IL_8C3A_085
NA
IL_6P5N_1891/5/2896:2897,
1/5/3602:3605
No text annotation
homologous
IL_8C3A_086
NA
IL_6P5N_1901/5/3632:3633,
1/5/3827:3829
Single bulged A
homologous
IL_5TBW_082
NA
IL_6P5N_1911/5/3660:3665,
1/5/3677:3684
Kink-turn related
homologous
IL_5TBW_083
NA
IL_6P5N_1921/5/3700:3703,
1/5/3749:3750
Major groove intercalation
homologous
IL_5TBW_084
NA
IL_6P5N_1931/5/3704:3705,
1/5/3745:3748
Multiple bulged bases
homologous
IL_8C3A_090
NA
IL_6P5N_1941/5/3708:3710,
1/5/3741:3742
Single stack bend
homologous
IL_8C3A_091
NA
IL_6P5N_1951/5/3710:3714,
1/5/3739:3741
No text annotation
homologous
IL_8C3A_092
NA
IL_6P5N_1961/5/3715:3721,
1/5/3732:3738
No text annotation
homologous
IL_8C3A_093
NA
IL_6P5N_1971/5/3780:3781,
1/5/3811:3814
Bulged stacked bases
geometric
IL_4V9F_070
IL_22551.4
IL_6P5N_1981/5/3781:3792,
1/5/3808:3811
No text annotation
homologous
IL_5TBW_090
NA
IL_6P5N_1991/5/3895:3898,
1/5/4563:4565
Major groove platform with extra pair
homologous
IL_5TBW_091
NA
IL_6P5N_2001/5/3900:3902,
1/5/4558:4561
No text annotation
homologous
IL_8C3A_097
NA
IL_6P5N_2011/5/3913:3915,
1/5/4388:4389
Single bulged U
homologous
IL_8C3A_098
NA
IL_6P5N_2021/5/3916:3917,
1/5/4384:4387
Minor groove platform
homologous
IL_5TBW_094
NA
IL_6P5N_2031/5/3927:3929,
1/5/4181:4184
No text annotation
homologous
IL_8C3A_100
NA
IL_6P5N_2041/5/3948:3953,
1/5/4059:4065
Tandem non-canonical cWW pairs with near WC pairs
geometric
IL_4EYA_005
IL_82292.1
IL_6P5N_2771/5/3948:3976,
1/5/4035:4065
No text annotation
IL_6P5N_2051/5/3954:3968,
1/5/4053:4058
No text annotation
IL_6P5N_2061/5/3968:3976,
1/5/4035:4053
No text annotation
IL_6P5N_2071/5/4082:4088,
1/5/4161:4164
No text annotation
homologous
IL_5TBW_096
NA
IL_6P5N_2781/5/4091:4129,
1/5/4155:4158
No text annotation
IL_6P5N_2081/5/4191:4192,
1/5/4202:4204
Single bulged A
homologous
IL_8C3A_107
NA
IL_6P5N_2091/5/4243:4245,
1/5/4263:4267
Isolated tHS basepair with bulges
homologous
IL_5TBW_099
NA
IL_6P5N_2101/5/4291:4293,
1/5/4317:4318
Single bulged A
geometric
IL_5WWT_001
IL_31462.7
IL_6P5N_2111/5/4295:4298,
1/5/4312:4315
Tandem non-canonical cWW pairs
homologous
IL_5TBW_100
NA
IL_6P5N_2121/5/4347:4350,
1/5/4364:4365
Single stack bend
geometric
IL_5J7L_032
IL_26793.1
IL_6P5N_2131/5/4400:4401,
1/5/4442:4444
Major groove platform
homologous
IL_5TBW_102
NA
IL_6P5N_2141/5/4401:4403,
1/5/4440:4442
Isolated non-canonical cWW pair
geometric
IL_5TBW_103
NA
IL_6P5N_2151/5/4403:4405,
1/5/4439:4440
Major groove platform
homologous
IL_5TBW_104
NA
IL_6P5N_2161/5/4405:4407,
1/5/4435:4439
Major groove minor groove platform with extra cWW
geometric
IL_5TBW_105
NA
IL_6P5N_2171/5/4412:4416,
1/5/4426:4430
No text annotation
homologous
IL_8C3A_114
NA
IL_6P5N_2181/5/4453:4454,
1/5/4526:4528
Major groove platform
homologous
IL_5TBW_107
NA
IL_6P5N_2191/5/4456:4458,
1/5/4520:4524
Isolated non-canonical cWW with bulges
geometric
IL_5TBW_108
NA
IL_6P5N_2201/5/4458:4459,
1/5/4517:4520
No text annotation
homologous
IL_8C3A_117
NA
IL_6P5N_2211/5/4466:4468,
1/5/4489:4491
Isolated non-canonical cWW pair
geometric
IL_5TBW_110
NA
IL_6P5N_2791/5/4466:4470,
1/5/4485:4491
No text annotation
IL_6P5N_2221/5/4468:4470,
1/5/4485:4489
No text annotation
IL_6P5N_2231/5/4495:4497,
1/5/4503:4505
Isolated non-canonical cWW pair
homologous
IL_8C3A_120
NA
IL_6P5N_2241/5/4537:4538,
1/5/4547:4549
Single bulged A
homologous
IL_5TBW_113
NA
IL_6P5N_2251/5/4580:4582,
1/5/4721:4723
No text annotation
geometric
IL_3ICQ_003
NA
IL_6P5N_2261/5/4582:4585,
1/5/4717:4721
Double sheared
geometric
IL_5J7L_256
IL_09705.15
IL_6P5N_2271/5/4590:4592,
1/5/4618:4620
Isolated non-canonical cWW pair
homologous
IL_5TBW_115
NA
IL_6P5N_2281/5/4596:4603,
1/5/4608:4614
8x7 Sarcin-Ricin; G-bulge
homologous
IL_8C3A_125
NA
IL_6P5N_2291/5/4624:4629,
1/5/4669:4673
No text annotation
IL_6P5N_2301/5/4632:4637,
1/5/4662:4666
UAA/GAN related
homologous
IL_5TBW_118
NA
IL_6P5N_2311/5/4638:4640,
1/5/4659:4661
Isolated cWH basepair
geometric
IL_3R1C_012
IL_10167.6
IL_6P5N_2321/5/4641:4642,
1/5/4655:4658
Multiple bulged bases
homologous
IL_5TBW_119
NA
IL_6P5N_2331/5/4680:4685,
1/5/4705:4710
UAA/GAN with extra cWW
geometric
IL_5J7L_350
IL_49767.8
IL_6P5N_2881/5/4740:4743,
1/5/4957:4959
Stack and bulge
geometric
IL_2O3X_001
IL_31737.3
IL_6P5N_2351/5/4743:4746,
1/5/4954:4957
Tandem non-canonical cWW pairs
geometric
IL_4V88_438
NA
IL_6P5N_2361/5/4756:4766,
1/5/4868:4877
No text annotation
homologous
IL_8P9A_352
IL_42231.1
IL_6P5N_2371/5/4769:4775,
1/5/4860:4865
No text annotation
IL_6P5N_2381/5/4885:4888,
1/5/4931:4934
Tandem non-canonical cWW pairs
geometric
IL_5EW4_002
IL_85033.2
IL_6P5N_2391/5/4890:4896,
1/5/4924:4929
No text annotation
IL_6P5N_2811/5/4890:4904,
1/5/4918:4929
No text annotation
IL_6P5N_2401/5/4897:4902,
1/5/4919:4923
Tandem non-canonical cWW pairs
geometric
IL_1D4R_001
IL_85033.2
IL_6P5N_2411/5/4902:4904,
1/5/4918:4919
Single stack bend
geometric
IL_7RQB_058
NA
IL_6P5N_2421/5/4972:4975,
1/5/4983:4986
Tandem non-canonical cWW pairs
geometric
IL_5TBW_129
NA
IL_6P5N_2431/5/4992:4994,
1/5/5057:5059
Isolated non-canonical cWW pair
geometric
IL_3HHN_004
IL_87907.2
IL_6P5N_2441/5/4996:4997,
1/5/5053:5055
Single bulged C
geometric
IL_1KUQ_002
IL_61258.15
IL_6P5N_2451/5/5000:5002,
1/5/5045:5050
Isolated non-canonical cWW pair
homologous
IL_5TBW_132
NA
IL_6P5N_2461/5/5003:5009,
1/5/5039:5044
No text annotation
IL_6P5N_2471/5/5012:5014,
1/5/5035:5036
Single bulged U
homologous
IL_8C3A_140
NA
IL_6P5N_2481/5/5014:5017,
1/5/5032:5035
Double sheared; A in syn
homologous
IL_8C3A_141
NA
IL_6P5N_2491/7/15:16,
1/7/62:64
Single bulged A
homologous
IL_5TBW_372
NA
IL_6P5N_2501/7/21:27,
1/7/52:57
Minor groove platform related
homologous
IL_5TBW_373
NA
IL_6P5N_2511/7/28:29,
1/7/48:51
Major groove minor groove platform; mini C-loop
homologous
IL_5J7L_357
IL_68140.4
IL_6P5N_2521/7/32:36,
1/7/41:45
Symmetric double minor groove platform
geometric
IL_7RQB_114
NA
IL_6P5N_2531/7/71:78,
1/7/98:104
8x7 Sarcin-Ricin; G-bulge
homologous
IL_5TBW_377
NA
IL_6P5N_2541/7/79:81,
1/7/95:97
Isolated non-canonical cWW pair
geometric
IL_5TBW_034
NA
IL_6P5N_2551/7/82:85,
1/7/92:94
Isolated non-canonical cWW pair
homologous
IL_5TBW_378
NA
IL_6P5N_2561/8/64:66,
1/8/92:95
Isolated non-canonical cWW pair
geometric
IL_5TBW_145
NA

Problematic loops

#loop idProblemSequence
IL_6P5N_019No text annotation
IL_6P5N_028C-loop with extra cWW pair
IL_6P5N_259No text annotation
IL_6P5N_046Tandem non-canonical cWW pairs
IL_6P5N_049Triple non-canonical cWW pairs
IL_6P5N_065No text annotation
IL_6P5N_100No text annotation
IL_6P5N_112No text annotation
IL_6P5N_270No text annotation
IL_6P5N_272No text annotation
IL_6P5N_154No text annotation
IL_6P5N_274No text annotation
IL_6P5N_181No text annotation
IL_6P5N_234No text annotation
IL_6P5N_280Triple non-canonical cWW pairs
IL_6P5N_282No text annotation

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
J3_6P5N_0451/1/6553:6555,
1/1/6575:6577,
1/1/6598:6599
No text annotation
J3_6P5N_0021/2/40:41,
1/2/481:487,
1/2/512:514
No text annotation
geometric
J3_4V88_078
NA
J3_6P5N_0311/2/40:47,
1/2/479:487,
1/2/512:514
No text annotation
homologous
J3_8P9A_069
J3_46317.4
J3_6P5N_0031/2/682:685,
1/2/917:922,
1/2/1022:1023
No text annotation
J3_6P5N_0041/2/816:820,
1/2/828:831,
1/2/843:848
No text annotation
J3_6P5N_0051/2/938:941,
1/2/985:993,
1/2/1000:1004
No text annotation
homologous
J3_4V88_033
NA
J3_6P5N_0061/2/1094:1096,
1/2/1136:1140,
1/2/1147:1151
No text annotation
J3_6P5N_0071/2/1218:1221,
1/2/1645:1651,
1/2/1673:1680
No text annotation
homologous
J3_4V88_035
NA
J3_6P5N_0081/2/1225:1228,
1/2/1530:1532,
1/2/1638:1641
No text annotation
homologous
J3_8C3A_039
NA
J3_6P5N_0321/2/1237:1244,
1/2/1255:1266,
1/2/1516:1520
No text annotation
homologous
J3_8C3A_040
NA
J3_6P5N_0101/2/1272:1277,
1/2/1320:1324,
1/2/1504:1510
No text annotation
homologous
J3_4V88_038
NA
J3_6P5N_0111/2/1340:1345,
1/2/1384:1389,
1/2/1481:1486
No text annotation
homologous
J3_8P9A_080
J3_99563.1
J3_6P5N_0121/2/1350:1351,
1/2/1360:1363,
1/2/1375:1379
No text annotation
homologous
J3_8C3A_085
NA
J3_6P5N_0131/2/1391:1395,
1/2/1450:1456,
1/2/1470:1479
No text annotation
J3_6P5N_0341/2/1391:1401,
1/2/1445:1456,
1/2/1470:1479
No text annotation
J3_6P5N_0141/2/1532:1536,
1/2/1597:1604,
1/2/1635:1638
No text annotation
homologous
J3_4V88_041
NA
J3_6P5N_0151/5/112:116,
1/5/155:160,
1/5/275:278
No text annotation
J3_6P5N_0351/5/196:199,
1/5/215:228,
1/5/240:244
No text annotation
J3_6P5N_0361/5/351:367,
1/5/374:379,
1/8/21:24
No text annotation
homologous
J3_8P9A_045
J3_30040.2
J3_6P5N_0161/5/380:387,
1/5/414:415,
1/8/19:20
No text annotation
homologous
J3_5TBW_002
NA
J3_6P5N_0371/5/380:390,
1/5/401:415,
1/8/19:20
No text annotation
homologous
J3_8C3A_049
NA
J3_6P5N_0381/5/451:455,
1/5/701:705,
1/5/1292:1296
No text annotation
J3_6P5N_0171/5/983:985,
1/5/1070:1074,
1/5/1236:1273
No text annotation
J3_6P5N_0181/5/1531:1537,
1/5/1622:1624,
1/5/1640:1643
No text annotation
homologous
J3_8C3A_003
NA
J3_6P5N_0191/5/1545:1548,
1/5/1580:1584,
1/5/1609:1614
No text annotation
homologous
J3_5TBW_005
NA
J3_6P5N_0391/5/1726:1727,
1/5/1802:1806,
1/5/1832:1837
No text annotation
homologous
J3_8P9A_051
J3_09667.1
J3_6P5N_0401/5/1957:1972,
1/5/1994:2005,
1/5/2014:2026
No text annotation
J3_6P5N_0201/5/2393:2399,
1/5/2805:2807,
1/5/2819:2822
No text annotation
homologous
J3_5TBW_008
NA
J3_6P5N_0211/5/2402:2405,
1/5/2785:2791,
1/5/2800:2802
No text annotation
homologous
J3_5TBW_009
NA
J3_6P5N_0221/5/2440:2445,
1/5/2515:2519,
1/5/2536:2537
No text annotation
homologous
J3_5TBW_010
NA
J3_6P5N_0411/5/2451:2456,
1/5/2465:2479,
1/5/2499:2508
No text annotation
J3_6P5N_0231/5/2551:2555,
1/5/2572:2575,
1/5/2757:2767
No text annotation
J3_6P5N_0241/5/2575:2576,
1/5/2585:2589,
1/5/2756:2757
No text annotation
homologous
J3_8C3A_054
NA
J3_6P5N_0421/5/2598:2602,
1/5/2737:2738,
1/5/2742:2747
No text annotation
homologous
J3_8P9A_058
J3_12393.2
J3_6P5N_0251/5/3937:3939,
1/5/4074:4078,
1/5/4168:4173
No text annotation
geometric
J3_7A0S_009
J3_89368.5
J3_6P5N_0431/5/4228:4230,
1/5/4331:4342,
1/5/4370:4375
No text annotation
homologous
J3_8C3A_056
NA
J3_6P5N_0261/5/4241:4243,
1/5/4267:4269,
1/5/4278:4283
No text annotation
homologous
J3_5TBW_013
NA
J3_6P5N_0271/5/4463:4466,
1/5/4491:4493,
1/5/4507:4513
No text annotation
homologous
J3_5TBW_014
NA
J3_6P5N_0441/5/4749:4754,
1/5/4879:4883,
1/5/4936:4951
No text annotation
J3_6P5N_0281/5/4970:4972,
1/5/4986:4991,
1/5/5060:5063
No text annotation
J3_6P5N_0291/7/9:14,
1/7/65:66,
1/7/109:110
No text annotation
homologous
J3_5TBW_045
NA
J3_6P5N_0301/8/44:45,
1/8/58:64,
1/8/95:99
No text annotation
homologous
J3_8C3A_060
NA
J4_6P5N_0011/2/98:106,
1/2/355:357,
1/2/405:409,
1/2/431:432
No text annotation
homologous
J4_8C3A_021
NA
J4_6P5N_0021/2/671:673,
1/2/1032:1037,
1/2/1078:1089,
1/2/1160:1161
No text annotation
homologous
J4_8P9A_022
J4_61885.6
J4_6P5N_0031/5/111:112,
1/5/278:283,
1/5/304:310,
1/5/327:330
No text annotation
homologous
J4_8P9A_012
J4_45801.6
J4_6P5N_0041/5/196:199,
1/5/215:222,
1/5/226:228,
1/5/240:244
No text annotation
J4_6P5N_0051/5/712:713,
1/5/955:961,
1/5/971:978,
1/5/1278:1284
No text annotation
J4_6P5N_0061/5/2365:2371,
1/5/2389:2391,
1/5/2824:2829,
1/5/3856:3857
No text annotation
J4_6P5N_0071/5/2406:2410,
1/5/2434:2439,
1/5/2538:2539,
1/5/2777:2784
No text annotation
homologous
J4_8C3A_004
NA
J4_6P5N_0081/5/2618:2619,
1/5/2637:2642,
1/5/2692:2698,
1/5/2718:2719
No text annotation
J4_6P5N_0091/5/3634:3638,
1/5/3650:3654,
1/5/3690:3694,
1/5/3821:3826
No text annotation
homologous
J4_8P9A_017
J4_07509.2
J4_6P5N_0101/5/3696:3698,
1/5/3752:3753,
1/5/3771:3780,
1/5/3814:3819
No text annotation
homologous
J4_8C3A_007
NA
J4_6P5N_0111/5/4231:4235,
1/5/4289:4291,
1/5/4318:4319,
1/5/4328:4330
No text annotation
J4_6P5N_0121/5/4587:4590,
1/5/4620:4621,
1/5/4676:4678,
1/5/4712:4715
No text annotation
J5_6P5N_0011/2/30:34,
1/2/521:527,
1/2/558:563,
1/2/592:595,
1/2/641:644
No text annotation
homologous
J5_8C3A_018
NA
J5_6P5N_0021/2/30:34,
1/2/521:527,
1/2/558:565,
1/2/585:595,
1/2/641:644
No text annotation
J5_6P5N_0031/2/53:62,
1/2/86:96,
1/2/434:436,
1/2/457:461,
1/2/468:474
No text annotation
J5_6P5N_0041/5/19:21,
1/8/35:42,
1/8/101:106,
1/8/113:114,
1/8/136:138
No text annotation
homologous
J5_8P9A_010
J5_01737.2
J5_6P5N_0051/5/1335:1340,
1/5/1516:1519,
1/5/1658:1661,
1/5/2288:2290,
1/5/2345:2351
No text annotation
homologous
J5_8C3A_002
NA
J5_6P5N_0061/5/2855:2863,
1/5/2887:2888,
1/5/3613:3614,
1/5/3618:3626,
1/5/3835:3837
No text annotation
homologous
J5_8C3A_004
NA
J5_6P5N_0071/5/3903:3910,
1/5/4392:4400,
1/5/4444:4453,
1/5/4528:4534,
1/5/4552:4557
No text annotation
J5_6P5N_0081/5/3920:3923,
1/5/4188:4191,
1/5/4204:4205,
1/5/4227:4228,
1/5/4375:4381
No text annotation
homologous
J5_8P9A_015
J5_08912.1
J6_6P5N_0011/5/21:26,
1/5/57:67,
1/5/74:78,
1/5/105:109,
1/5/332:339,
1/8/33:35
No text annotation
J6_6P5N_0021/5/1352:1355,
1/5/1384:1388,
1/5/1395:1399,
1/5/1418:1421,
1/5/1464:1466,
1/5/1499:1504
No text annotation
J6_6P5N_0031/5/3920:3923,
1/5/4188:4191,
1/5/4204:4205,
1/5/4227:4230,
1/5/4331:4342,
1/5/4370:4381
No text annotation
J7_6P5N_0011/5/1666:1671,
1/5/1684:1685,
1/5/1852:1855,
1/5/1879:1884,
1/5/1895:1899,
1/5/2077:2078,
1/5/2278:2283
No text annotation

Problematic loops

#loop idProblemSequence
J3_6P5N_001No text annotation
J3_6P5N_009No text annotation
J3_6P5N_033No text annotation

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