Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
HL_6P5N_0011/1/6444:6460No text annotation
Not in a motif group
HL_6P5N_0021/1/6497:6502No text annotation
Not in a motif group
geometric
HL_5U30_001
HL_69353.7
HL_6P5N_0031/1/6521:6527No text annotation
Not in a motif group
HL_6P5N_0041/1/6560:6569No text annotation
Not in a motif group
geometric
HL_4V83_139
HL_16135.1
HL_6P5N_0051/1/6584:6591No text annotation
Not in a motif group
HL_6P5N_0061/2/7:17No text annotation
Not in a motif group
homologous
HL_4V88_186
HL_67265.4
HL_6P5N_0071/2/69:80No text annotation
Not in a motif group
HL_6P5N_0081/2/156:162Other HL
Not in a motif group
homologous
HL_4V88_188
HL_43074.18
HL_6P5N_0091/2/195:203No text annotation
Not in a motif group
HL_6P5N_0101/2/288:295T-loop with 1 bulged base
Not in a motif group
homologous
HL_4V88_191
HL_68493.6
HL_6P5N_0121/2/377:387No text annotation
Not in a motif group
HL_6P5N_0131/2/416:421No text annotation
Not in a motif group
homologous
HL_4V88_194
HL_18785.1
HL_6P5N_0141/2/441:452No text annotation
Not in a motif group
homologous
HL_4V88_195
HL_22443.1
HL_6P5N_0151/2/462:467UNCG
Not in a motif group
homologous
HL_4V88_196
HL_79299.11
HL_6P5N_0161/2/498:504No text annotation
Not in a motif group
homologous
HL_4V88_197
HL_50374.1
HL_6P5N_0171/2/539:544No text annotation
Not in a motif group
homologous
HL_4V88_198
HL_30541.1
HL_6P5N_0181/2/569:581No text annotation
Not in a motif group
geometric
HL_4V88_199
HL_17086.2
HL_6P5N_0191/2/618:623Other HL
Not in a motif group
homologous
HL_4V88_200
HL_43074.18
HL_6P5N_0221/2/820:828No text annotation
Not in a motif group
homologous
HL_4V88_203
HL_72066.1
HL_6P5N_0241/2/884:902No text annotation
Not in a motif group
HL_6P5N_0251/2/956:967No text annotation
Not in a motif group
HL_6P5N_0261/2/994:999Other HL
Not in a motif group
homologous
HL_4V88_207
HL_43074.18
HL_6P5N_0271/2/1054:1064No text annotation
Not in a motif group
homologous
HL_4V88_208
HL_87219.4
HL_6P5N_0281/2/1113:1120No text annotation
Not in a motif group
HL_6P5N_0291/2/1141:1146Other HL
Not in a motif group
homologous
HL_4V88_210
HL_43074.18
HL_6P5N_0301/2/1178:1183GNRA
Not in a motif group
homologous
HL_4V88_211
HL_43074.18
HL_6P5N_0311/2/1245:1254No text annotation
Not in a motif group
homologous
HL_4V88_212
HL_96854.1
HL_6P5N_0321/2/1294:1305No text annotation
Not in a motif group
HL_6P5N_0331/2/1353:1358GNRA
Not in a motif group
homologous
HL_4V88_214
HL_43074.18
HL_6P5N_0341/2/1366:1373No text annotation
Not in a motif group
homologous
HL_4V88_215
HL_54035.7
HL_6P5N_0361/2/1460:1466Other HL
Not in a motif group
geometric
HL_2CZJ_007
HL_79299.11
HL_6P5N_0371/2/1565:1570GNRA
Not in a motif group
homologous
HL_4V88_218
HL_43074.18
HL_6P5N_0381/2/1613:1626No text annotation
Not in a motif group
HL_6P5N_0391/2/1658:1666No text annotation
Not in a motif group
homologous
HL_4V88_220
HL_01181.4
HL_6P5N_0411/2/1847:1852Other HL
Not in a motif group
homologous
HL_4V88_222
HL_43074.18
HL_6P5N_0421/5/37:44No text annotation
Not in a motif group
geometric
HL_5TBW_001
HL_23481.5
HL_6P5N_0431/5/68:73No text annotation
Not in a motif group
homologous
HL_5TBW_002
HL_96776.3
HL_6P5N_0441/5/89:95No text annotation
Not in a motif group
homologous
HL_5TBW_003
HL_67216.5
HL_6P5N_0451/5/130:138No text annotation
Not in a motif group
HL_6P5N_0461/5/204:211T-loop with 1 bulged base
Not in a motif group
homologous
HL_5TBW_005
HL_68493.6
HL_6P5N_0471/5/222:226No text annotation
Not in a motif group
homologous
HL_5TBW_006
HL_98557.5
HL_6P5N_0481/5/230:238No text annotation
Not in a motif group
homologous
HL_5TBW_007
HL_08002.6
HL_6P5N_0491/5/289:298No text annotation
Not in a motif group
homologous
HL_5TBW_008
HL_54035.7
HL_6P5N_0501/5/314:323No text annotation
Not in a motif group
HL_6P5N_0511/5/368:373Other HL
Not in a motif group
homologous
HL_5TBW_010
HL_43074.18
HL_6P5N_0521/5/393:398GNRA
Not in a motif group
homologous
HL_5TBW_011
HL_43074.18
HL_6P5N_0531/5/521:641No text annotation
Not in a motif group
HL_6P5N_0541/5/756:906No text annotation
Not in a motif group
HL_6P5N_0551/5/962:970No text annotation
Not in a motif group
geometric
HL_2Y9H_003
HL_98557.5
HL_6P5N_0561/5/1177:1184No text annotation
Not in a motif group
geometric
HL_4WF9_003
HL_62869.3
HL_6P5N_0571/5/1317:1326T-loop with 2 stacked bulged bases
Not in a motif group
homologous
HL_5TBW_014
HL_33239.17
HL_6P5N_0581/5/1363:1374No text annotation
Not in a motif group
geometric
HL_2ZZM_002
HL_18218.2
HL_6P5N_0591/5/1389:1394GNRA
Not in a motif group
homologous
HL_5TBW_016
HL_43074.18
HL_6P5N_0601/5/1404:1413No text annotation
Not in a motif group
geometric
HL_5TBW_006
HL_98557.5
HL_6P5N_0611/5/1436:1448No text annotation
Not in a motif group
geometric
HL_2Y8W_001
HL_69459.1
HL_6P5N_0621/5/1479:1486Other HL
Not in a motif group
geometric
HL_5J7L_200
HL_96776.3
HL_6P5N_0631/5/1561:1566GNRA
Not in a motif group
homologous
HL_5TBW_019
HL_43074.18
HL_6P5N_0641/5/1593:1602No text annotation
Not in a motif group
homologous
HL_5TBW_020
HL_39334.5
HL_6P5N_0651/5/1627:1635No text annotation
Not in a motif group
homologous
HL_5TBW_021
HL_05832.1
HL_6P5N_0661/5/1675:1680No text annotation
Not in a motif group
homologous
HL_5TBW_022
HL_15942.5
HL_6P5N_0671/5/1758:1774No text annotation
Not in a motif group
HL_6P5N_0681/5/1816:1823No text annotation
Not in a motif group
geometric
HL_5TBW_024
HL_54035.7
HL_6P5N_0691/5/1864:1870GNRA
Not in a motif group
homologous
HL_5TBW_025
HL_43074.18
HL_6P5N_0701/5/1886:1893No text annotation
Not in a motif group
homologous
HL_5TBW_026
HL_72451.5
HL_6P5N_0711/5/1978:1988No text annotation
Not in a motif group
HL_6P5N_0721/5/2005:2014No text annotation
Not in a motif group
HL_6P5N_0731/5/2087:2270No text annotation
Not in a motif group
HL_6P5N_0741/5/2317:2322GNRA
Not in a motif group
homologous
HL_5TBW_030
HL_43074.18
HL_6P5N_0751/5/2376:2384T-loop with 2 stacked bulged bases
Not in a motif group
homologous
HL_5TBW_031
HL_33239.17
HL_6P5N_0761/5/2420:2426No text annotation
Not in a motif group
homologous
HL_5TBW_032
HL_86880.5
HL_6P5N_0771/5/2458:2463Other HL
Not in a motif group
homologous
HL_5TBW_033
HL_43074.18
HL_6P5N_0781/5/2486:2492No text annotation
Not in a motif group
HL_6P5N_0791/5/2523:2532No text annotation
Not in a motif group
homologous
HL_5TBW_035
HL_78457.4
HL_6P5N_0801/5/2561:2566No text annotation
Not in a motif group
geometric
HL_3OXE_002
HL_32527.3
HL_6P5N_0811/5/2578:2583GNRA
Not in a motif group
homologous
HL_5TBW_036
HL_43074.18
HL_6P5N_0821/5/2624:2632No text annotation
Not in a motif group
homologous
HL_5TBW_037
HL_73793.2
HL_6P5N_0831/5/2664:2670No text annotation
Not in a motif group
homologous
HL_5TBW_038
HL_00923.1
HL_6P5N_0841/5/2705:2710No text annotation
Not in a motif group
geometric
HL_5NFV_001
HL_58912.1
HL_6P5N_0851/5/2738:2742No text annotation
Not in a motif group
homologous
HL_5TBW_040
HL_69353.7
HL_6P5N_0861/5/2792:2799No text annotation
Not in a motif group
homologous
HL_5TBW_041
HL_66171.3
HL_6P5N_0871/5/2810:2816GNRA with one bulged base
Not in a motif group
homologous
HL_5TBW_042
HL_02361.6
HL_6P5N_0881/5/2872:2877UNCG
Not in a motif group
homologous
HL_5TBW_043
HL_79299.11
HL_6P5N_0891/5/2901:3598No text annotation
Not in a motif group
HL_6P5N_0901/5/3614:3618No text annotation
Not in a motif group
homologous
HL_5TBW_045
HL_99223.1
HL_6P5N_0911/5/3639:3649No text annotation
Not in a motif group
homologous
HL_5TBW_046
HL_43613.4
HL_6P5N_0921/5/3668:3674GNRA
Not in a motif group
homologous
HL_5TBW_047
HL_43074.18
HL_6P5N_0931/5/3724:3729Other HL
Not in a motif group
homologous
HL_5TBW_048
HL_43074.18
HL_6P5N_0941/5/3757:3767No text annotation
Not in a motif group
homologous
HL_5TBW_049
HL_98248.1
HL_6P5N_0951/5/3796:3804No text annotation
Not in a motif group
homologous
HL_5TBW_050
HL_53760.4
HL_6P5N_0961/5/3873:3882No text annotation
Not in a motif group
homologous
HL_5TBW_051
HL_90642.5
HL_6P5N_0971/5/3976:4035No text annotation
Not in a motif group
HL_6P5N_0981/5/4100:4109No text annotation
Not in a motif group
HL_6P5N_0991/5/4134:4150No text annotation
Not in a motif group
HL_6P5N_1001/5/4193:4201No text annotation
Not in a motif group
homologous
HL_5TBW_054
HL_46891.3
HL_6P5N_1011/5/4210:4222No text annotation
Not in a motif group
homologous
HL_5TBW_055
HL_19870.5
HL_6P5N_1021/5/4250:4258No text annotation
Not in a motif group
homologous
HL_5TBW_056
HL_76406.3
HL_6P5N_1031/5/4270:4277No text annotation
Not in a motif group
homologous
HL_5TBW_057
HL_46142.8
HL_6P5N_1041/5/4301:4309No text annotation
Not in a motif group
homologous
HL_5TBW_058
HL_14725.1
HL_6P5N_1051/5/4321:4326GNRA
Not in a motif group
homologous
HL_5TBW_059
HL_43074.18
HL_6P5N_1061/5/4352:4362No text annotation
Not in a motif group
geometric
HL_2ZZM_002
HL_18218.2
HL_6P5N_1071/5/4417:4425No text annotation
Not in a motif group
homologous
HL_5TBW_061
HL_36421.5
HL_6P5N_1081/5/4474:4481No text annotation
Not in a motif group
homologous
HL_5TBW_062
HL_92681.5
HL_6P5N_1091/5/4497:4503No text annotation
Not in a motif group
geometric
HL_5TBW_063
HL_26055.6
HL_6P5N_1101/5/4540:4545GNRA
Not in a motif group
homologous
HL_5TBW_064
HL_43074.18
HL_6P5N_1111/5/4603:4608GNRA
Not in a motif group
geometric
HL_5TBW_065
HL_43074.18
HL_6P5N_1121/5/4646:4651Ribsomal LSU H95
Not in a motif group
homologous
HL_5TBW_066
HL_67719.1
HL_6P5N_1131/5/4688:4702No text annotation
Not in a motif group
homologous
HL_5TBW_067
HL_56677.5
HL_6P5N_1141/5/4775:4860No text annotation
Not in a motif group
HL_6P5N_1151/5/4904:4918No text annotation
Not in a motif group
HL_6P5N_1161/5/4975:4983No text annotation
Not in a motif group
geometric
HL_5J7L_201
HL_05018.6
HL_6P5N_1171/5/5020:5029No text annotation
Not in a motif group
HL_6P5N_1181/7/36:41No text annotation
Not in a motif group
homologous
HL_5TBW_185
HL_02733.5
HL_6P5N_1191/7/86:91GNRA
Not in a motif group
homologous
HL_5TBW_186
HL_43074.18
HL_6P5N_1201/8/47:56No text annotation
Not in a motif group
geometric
HL_7RQB_001
HL_29414.1
HL_6P5N_1221/8/107:112No text annotation
Not in a motif group
homologous
HL_5TBW_075
HL_06569.2
HL_6P5N_1231/8/121:129No text annotation
Not in a motif group

Problematic loops

#loop idProblemSequence
HL_6P5N_011No text annotation
HL_6P5N_020No text annotation
HL_6P5N_021No text annotation
HL_6P5N_023No text annotation
HL_6P5N_035No text annotation
HL_6P5N_040No text annotation
HL_6P5N_121No text annotation

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
IL_6P5N_0011/1/6491:6494,
1/1/6505:6513
No text annotation
Not in a motif group
IL_6P5N_0021/1/6558:6560,
1/1/6569:6572
No text annotation
Not in a motif group
geometric
IL_4P3T_002
IL_87332.1
IL_6P5N_0031/2/23:25,
1/2/649:651
No text annotation
Not in a motif group
geometric
IL_4M4O_001
IL_01312.13
IL_6P5N_0041/2/34:36,
1/2/519:521
UC cWW
Not in a motif group
homologous
IL_4V88_385
IL_01312.13
IL_6P5N_0051/2/37:40,
1/2/514:518
Double sheared
Not in a motif group
geometric
IL_4WF9_016
IL_09705.7
IL_6P5N_0061/2/41:47,
1/2/479:481
No text annotation
Not in a motif group
homologous
IL_4V88_387
IL_34626.4
IL_6P5N_0071/2/49:51,
1/2/476:477
Minor groove platform
Not in a motif group
homologous
IL_4V88_388
IL_06437.11
IL_6P5N_0081/2/56:62,
1/2/86:89
Other IL
Not in a motif group
geometric
IL_5TBW_043
IL_08757.3
IL_6P5N_0091/2/63:68,
1/2/81:85
No text annotation
Not in a motif group
homologous
IL_4V88_390
IL_59423.1
IL_6P5N_0101/2/108:110,
1/2/351:353
No text annotation
Not in a motif group
geometric
IL_2O3V_001
IL_01312.13
IL_6P5N_0111/2/110:112,
1/2/349:351
No text annotation
Not in a motif group
geometric
IL_4WF9_020
IL_01312.13
IL_6P5N_0121/2/112:115,
1/2/348:349
Multiple bulged bases
Not in a motif group
homologous
IL_4V88_392
IL_13730.12
IL_6P5N_0131/2/116:121,
1/2/343:347
No text annotation
Not in a motif group
homologous
IL_4V88_393
IL_76386.1
IL_6P5N_0141/2/123:125,
1/2/338:341
No text annotation
Not in a motif group
IL_6P5N_0151/2/144:151,
1/2/167:175
No text annotation
Not in a motif group
IL_6P5N_0161/2/152:154,
1/2/164:166
Isolated cWH basepair
Not in a motif group
geometric
IL_6RA4_002
IL_42589.6
IL_6P5N_0171/2/188:192,
1/2/207:211
Triple sheared
Not in a motif group
geometric
IL_4WFL_001
IL_56467.6
IL_6P5N_0181/2/194:195,
1/2/203:205
Single stack bend
Not in a motif group
geometric
IL_6FZ0_001
IL_04038.4
IL_6P5N_0201/2/312:314,
1/2/336:337
Single bulged A
Not in a motif group
homologous
IL_4V88_399
IL_80007.16
IL_6P5N_0211/2/317:320,
1/2/331:333
No text annotation
Not in a motif group
homologous
IL_4V88_400
IL_05922.1
IL_6P5N_0221/2/359:364,
1/2/396:403
Kink-turn with non-sequential stacking
Not in a motif group
homologous
IL_4V88_402
IL_29549.9
IL_6P5N_0231/2/366:371,
1/2/393:394
No text annotation
Not in a motif group
geometric
IL_5Y58_001
IL_98882.3
IL_6P5N_0241/2/411:413,
1/2/424:429
No text annotation
Not in a motif group
homologous
IL_4V88_404
IL_46732.1
IL_6P5N_0251/2/437:439,
1/2/454:456
Isolated cWH basepair
Not in a motif group
homologous
IL_4V88_405
IL_42589.6
IL_6P5N_0261/2/459:461,
1/2/468:470
Isolated near basepair
Not in a motif group
homologous
IL_4V88_406
IL_01312.13
IL_6P5N_0271/2/487:489,
1/2/511:512
Single bulged U
Not in a motif group
homologous
IL_4V88_407
IL_83039.11
IL_6P5N_0281/2/491:496,
1/2/506:509
C-loop with extra cWW pair
Not in a motif group
homologous
IL_4V88_408
IL_51590.1
IL_6P5N_0291/2/529:532,
1/2/552:556
No text annotation
Not in a motif group
IL_6P5N_0301/2/533:538,
1/2/545:551
No text annotation
Not in a motif group
IL_6P5N_0311/2/563:565,
1/2/585:592
No text annotation
Not in a motif group
IL_6P5N_0321/2/566:569,
1/2/581:584
tSH-tHW
Not in a motif group
geometric
IL_5UNE_005
IL_08757.3
IL_6P5N_0331/2/599:608,
1/2/635:637
No text annotation
Not in a motif group
IL_6P5N_0341/2/611:617,
1/2/624:632
No text annotation
Not in a motif group
homologous
IL_4V88_415
IL_04667.1
IL_6P5N_0351/2/663:665,
1/2/1162:1164
No text annotation
Not in a motif group
geometric
IL_1Y27_001
IL_01312.13
IL_6P5N_0361/2/665:671,
1/2/1161:1162
No text annotation
Not in a motif group
geometric
IL_4LFB_022
IL_19222.1
IL_6P5N_0371/2/673:675,
1/2/1030:1032
No text annotation
Not in a motif group
homologous
IL_4V88_417
IL_01312.13
IL_6P5N_0381/2/676:680,
1/2/1025:1029
tSH-tHW-tHS
Not in a motif group
homologous
IL_4V88_418
IL_39521.5
IL_6P5N_0391/2/692:694,
1/2/733:735
No text annotation
Not in a motif group
IL_6P5N_0401/2/802:803,
1/2/860:863
Major groove minor groove platform; mini C-loop
Not in a motif group
homologous
IL_4V88_423
IL_09061.4
IL_6P5N_0411/2/805:807,
1/2/856:858
No text annotation
Not in a motif group
homologous
IL_4V88_424
IL_01312.13
IL_6P5N_0421/2/807:815,
1/2/849:856
No text annotation
Not in a motif group
geometric
IL_4V88_425
IL_69091.1
IL_6P5N_0431/2/874:876,
1/2/910:912
No text annotation
Not in a motif group
geometric
IL_4V8Q_188
IL_01312.13
IL_6P5N_0441/2/877:879,
1/2/907:909
No text annotation
Not in a motif group
geometric
IL_3DIL_006
IL_01312.13
IL_6P5N_0451/2/922:923,
1/2/1019:1022
Major groove platform; stack outside cWW
Not in a motif group
homologous
IL_4V88_428
IL_70995.6
IL_6P5N_0461/2/924:927,
1/2/1014:1018
Tandem non-canonical cWW pairs
Not in a motif group
homologous
IL_4V88_429
IL_85877.10
IL_6P5N_0471/2/928:931,
1/2/1010:1013
Tandem non-canonical cWW pairs
Not in a motif group
homologous
IL_4V88_430
IL_85877.10
IL_6P5N_0481/2/931:935,
1/2/1007:1010
Tandem non-canonical cWW pairs
Not in a motif group
geometric
IL_4V88_431
IL_85877.10
IL_6P5N_0491/2/942:946,
1/2/980:984
No text annotation
Not in a motif group
IL_6P5N_0501/2/952:956,
1/2/967:974
Kink-turn
Not in a motif group
homologous
IL_4V88_434
IL_29549.9
IL_6P5N_0511/2/1042:1047,
1/2/1071:1073
Other IL
Not in a motif group
geometric
IL_4V88_435
IL_51590.1
IL_6P5N_0521/2/1047:1051,
1/2/1067:1071
tSH-tHW-tHS
Not in a motif group
homologous
IL_4V88_436
IL_39521.5
IL_6P5N_0531/2/1091:1093,
1/2/1152:1158
No text annotation
Not in a motif group
homologous
IL_4V88_437
IL_19557.1
IL_6P5N_0541/2/1098:1101,
1/2/1131:1134
Tandem non-canonical cWW pairs
Not in a motif group
geometric
IL_4V88_438
IL_85877.10
IL_6P5N_0551/2/1101:1103,
1/2/1129:1131
No text annotation
Not in a motif group
geometric
IL_4WF9_083
IL_01312.13
IL_6P5N_0561/2/1108:1110,
1/2/1123:1124
Minor groove platform
Not in a motif group
geometric
IL_4V88_412
IL_06437.11
IL_6P5N_0571/2/1168:1175,
1/2/1186:1191
8x6 Sarcin-Ricin with inserted Y; G-bulge
Not in a motif group
homologous
IL_4V88_440
IL_24606.1
IL_6P5N_0581/2/1203:1204,
1/2/1694:1696
Single bulged A
Not in a motif group
homologous
IL_4V88_441
IL_80007.16
IL_6P5N_0591/2/1206:1208,
1/2/1691:1692
Single bulged G
Not in a motif group
homologous
IL_4V88_442
IL_59137.10
IL_6P5N_0601/2/1214:1217,
1/2/1681:1685
C-loop
Not in a motif group
homologous
IL_4V88_443
IL_63596.4
IL_6P5N_0611/2/1230:1232,
1/2/1526:1528
No text annotation
Not in a motif group
homologous
IL_4V88_444
IL_01312.13
IL_6P5N_0621/2/1235:1236,
1/2/1521:1523
Minor groove platform
Not in a motif group
homologous
IL_4V88_445
IL_06437.11
IL_6P5N_0631/2/1270:1272,
1/2/1510:1512
No text annotation
Not in a motif group
geometric
IL_3MEI_002
IL_01312.13
IL_6P5N_0641/2/1325:1327,
1/2/1502:1503
Single bulged U
Not in a motif group
homologous
IL_4V88_449
IL_83039.11
IL_6P5N_0651/2/1328:1335,
1/2/1492:1501
No text annotation
Not in a motif group
IL_6P5N_0661/2/1337:1338,
1/2/1488:1490
Single bulged A
Not in a motif group
homologous
IL_4V88_452
IL_80007.16
IL_6P5N_0671/2/1347:1349,
1/2/1380:1382
Isolated cWH basepair
Not in a motif group
homologous
IL_4V88_453
IL_42589.6
IL_6P5N_0681/2/1363:1365,
1/2/1374:1375
Minor groove platform
Not in a motif group
geometric
IL_4V88_454
IL_06437.11
IL_6P5N_0691/2/1395:1402,
1/2/1444:1450
No text annotation
Not in a motif group
IL_6P5N_0701/2/1402:1405,
1/2/1441:1444
Minor groove platform
Not in a motif group
homologous
IL_4V88_456
IL_69507.1
IL_6P5N_0711/2/1412:1413,
1/2/1427:1429
Single bulged G
Not in a motif group
geometric
IL_5J7L_019
IL_59137.10
IL_6P5N_0721/2/1537:1539,
1/2/1594:1596
No text annotation
Not in a motif group
geometric
IL_3SZX_002
IL_01312.13
IL_6P5N_0731/2/1550:1558,
1/2/1577:1582
No text annotation
Not in a motif group
geometric
IL_5J7L_055
IL_75461.2
IL_6P5N_0741/2/1560:1562,
1/2/1573:1575
No text annotation
Not in a motif group
geometric
IL_5AOX_001
IL_01312.13
IL_6P5N_0751/2/1604:1610,
1/2/1629:1635
No text annotation
Not in a motif group
IL_6P5N_0761/2/1700:1702,
1/2/1833:1836
No text annotation
Not in a motif group
geometric
IL_4V88_463
IL_36143.2
IL_6P5N_0771/2/1702:1705,
1/2/1829:1833
No text annotation
Not in a motif group
IL_6P5N_0781/2/1706:1708,
1/2/1826:1828
No text annotation
Not in a motif group
geometric
IL_5MWI_007
IL_01312.13
IL_6P5N_0791/2/1708:1711,
1/2/1822:1826
No text annotation
Not in a motif group
geometric
IL_1CSL_001
IL_52451.10
IL_6P5N_0801/2/1714:1716,
1/2/1817:1819
AA cWW
Not in a motif group
homologous
IL_4V88_467
IL_01312.13
IL_6P5N_0811/2/1717:1720,
1/2/1813:1816
Double sheared
Not in a motif group
homologous
IL_4V88_468
IL_09705.7
IL_6P5N_0821/2/1720:1722,
1/2/1812:1813
Single bulged U
Not in a motif group
geometric
IL_4V88_469
IL_21340.1
IL_6P5N_0831/2/1729:1731,
1/2/1803:1805
No text annotation
Not in a motif group
homologous
IL_4V88_470
IL_01312.13
IL_6P5N_0841/2/1733:1736,
1/2/1798:1801
Double sheared
Not in a motif group
homologous
IL_4V88_471
IL_09705.7
IL_6P5N_0851/2/1739:1741,
1/2/1793:1795
UU cWW water inserted
Not in a motif group
geometric
IL_4E48_002
IL_01312.13
IL_6P5N_0861/2/1742:1746,
1/2/1788:1792
Triple sheared
Not in a motif group
homologous
IL_4V88_474
IL_56467.6
IL_6P5N_0871/2/1750:1753,
1/2/1779:1784
No text annotation
Not in a motif group
IL_6P5N_0881/2/1754:1756,
1/2/1777:1778
Single stack bend
Not in a motif group
geometric
IL_7A0S_083
IL_04038.4
IL_6P5N_0891/5/6:7,
1/8/149:151
Single bulged C
Not in a motif group
homologous
IL_5TBW_002
IL_61258.10
IL_6P5N_0901/5/12:14,
1/8/143:144
Single bulged U
Not in a motif group
homologous
IL_5TBW_003
IL_83039.11
IL_6P5N_0911/5/16:18,
1/8/139:141
No text annotation
Not in a motif group
geometric
IL_3ICQ_003
IL_01312.13
IL_6P5N_0921/5/26:27,
1/5/55:57
Single stack bend
Not in a motif group
homologous
IL_5TBW_004
IL_04038.4
IL_6P5N_0931/5/30:37,
1/5/44:52
9x8 Sarcin-Ricin; G-bulge
Not in a motif group
geometric
IL_4WF9_008
IL_61812.1
IL_6P5N_0941/5/81:88,
1/5/96:102
No text annotation
Not in a motif group
homologous
IL_5TBW_006
IL_29509.1
IL_6P5N_0951/5/118:121,
1/5/152:153
Major groove outside cWW, minor groove, intercalation pocket
Not in a motif group
geometric
IL_1U9S_003
IL_13730.12
IL_6P5N_0961/5/121:122,
1/5/147:152
No text annotation
Not in a motif group
homologous
IL_5TBW_007
IL_19724.1
IL_6P5N_0971/5/125:126,
1/5/142:144
Single bulged C
Not in a motif group
geometric
IL_1DQF_001
IL_61258.10
IL_6P5N_0981/5/168:173,
1/5/263:267
No text annotation
Not in a motif group
IL_6P5N_0991/5/178:181,
1/5/256:258
No text annotation
Not in a motif group
IL_6P5N_1001/5/181:189,
1/5/252:256
No text annotation
Not in a motif group
IL_6P5N_1011/5/195:196,
1/5/244:246
Single bulged C
Not in a motif group
geometric
IL_1DQF_001
IL_61258.10
IL_6P5N_1021/5/199:201,
1/5/214:215
Single bulged U
Not in a motif group
homologous
IL_5TBW_012
IL_83039.11
IL_6P5N_1031/5/339:342,
1/8/32:33
Minor groove platform
Not in a motif group
geometric
IL_7RQB_073
IL_06437.11
IL_6P5N_1041/5/348:350,
1/8/25:26
Single bulged A
Not in a motif group
homologous
IL_5TBW_013
IL_80007.16
IL_6P5N_1051/5/387:390,
1/5/401:414
No text annotation
Not in a motif group
geometric
IL_5TBW_014
IL_60992.5
IL_6P5N_1061/5/415:421,
1/8/13:19
Triple sheared with non-canonical cWW
Not in a motif group
homologous
IL_5TBW_015
IL_66414.5
IL_6P5N_1071/5/443:446,
1/5/1300:1304
No text annotation
Not in a motif group
geometric
IL_6AZ4_001
IL_01759.1
IL_6P5N_1081/5/448:450,
1/5/1297:1298
Single bulged C
Not in a motif group
geometric
IL_4C7O_003
IL_61258.10
IL_6P5N_1091/5/459:460,
1/5/695:697
Single bulged C
Not in a motif group
geometric
IL_4WF9_035
IL_61258.10
IL_6P5N_1101/5/460:464,
1/5/691:695
No text annotation
Not in a motif group
geometric
IL_5TBW_121
IL_05867.1
IL_6P5N_1111/5/466:472,
1/5/682:689
No text annotation
Not in a motif group
IL_6P5N_1121/5/480:486,
1/5/670:674
No text annotation
Not in a motif group
IL_6P5N_1131/5/487:488,
1/5/665:669
Multiple bulged bases
Not in a motif group
geometric
IL_1R3E_002
IL_13730.12
IL_6P5N_1141/5/491:493,
1/5/661:662
No text annotation
Not in a motif group
IL_6P5N_1151/5/497:500,
1/5/655:657
Isolated cWS basepair
Not in a motif group
geometric
IL_7A0S_041
IL_67621.5
IL_6P5N_1161/5/508:510,
1/5/649:650
Single bulged A
Not in a motif group
geometric
IL_6WPI_001
IL_80007.16
IL_6P5N_1171/5/517:521,
1/5/641:644
No text annotation
Not in a motif group
IL_6P5N_1181/5/709:710,
1/5/1286:1288
Single bulged G
Not in a motif group
geometric
IL_4LFB_036
IL_59137.10
IL_6P5N_1191/5/723:724,
1/5/942:945
Multiple bulged bases
Not in a motif group
geometric
IL_7V9E_001
IL_13730.12
IL_6P5N_1201/5/727:731,
1/5/938:939
No text annotation
Not in a motif group
IL_6P5N_1211/5/732:735,
1/5/927:937
No text annotation
Not in a motif group
IL_6P5N_1221/5/737:739,
1/5/924:925
No text annotation
Not in a motif group
IL_6P5N_1231/5/740:742,
1/5/922:923
Single stack bend
Not in a motif group
geometric
IL_7A0S_054
IL_04038.4
IL_6P5N_1241/5/742:743,
1/5/920:922
Single stack bend
Not in a motif group
geometric
IL_5J7L_044
IL_04038.4
IL_6P5N_1251/5/743:752,
1/5/910:920
No text annotation
Not in a motif group
IL_6P5N_1261/5/1074:1076,
1/5/1235:1236
Single stack bend
Not in a motif group
geometric
IL_5TBW_070
IL_72766.2
IL_6P5N_1271/5/1077:1080,
1/5/1219:1234
No text annotation
Not in a motif group
IL_6P5N_1281/5/1082:1084,
1/5/1213:1217
Isolated cWH basepair
Not in a motif group
geometric
IL_4J50_001
IL_01312.13
IL_6P5N_1291/5/1086:1087,
1/5/1209:1211
Single bulged C
Not in a motif group
geometric
IL_3SNP_003
IL_61258.10
IL_6P5N_1301/5/1095:1169,
1/5/1192:1201
No text annotation
Not in a motif group
IL_6P5N_1311/5/1172:1177,
1/5/1184:1189
No text annotation
Not in a motif group
IL_6P5N_1321/5/1357:1360,
1/5/1379:1382
No text annotation
Not in a motif group
IL_6P5N_1331/5/1360:1361,
1/5/1376:1379
Major groove outside cWW, minor groove, intercalation pocket
Not in a motif group
geometric
IL_1U9S_003
IL_13730.12
IL_6P5N_1341/5/1425:1429,
1/5/1455:1460
Triple sheared related
Not in a motif group
geometric
IL_4V9F_018
IL_64879.1
IL_6P5N_1351/5/1431:1434,
1/5/1450:1453
Double sheared
Not in a motif group
geometric
IL_4KZD_002
IL_09705.7
IL_6P5N_1361/5/1467:1468,
1/5/1496:1498
Single bulged A
Not in a motif group
homologous
IL_5TBW_024
IL_80007.16
IL_6P5N_1371/5/1474:1476,
1/5/1489:1490
Single base bend
Not in a motif group
geometric
IL_5IBB_340
IL_83121.7
IL_6P5N_1381/5/1520:1522,
1/5/1655:1657
No text annotation
Not in a motif group
homologous
IL_5TBW_027
IL_01312.13
IL_6P5N_1391/5/1522:1526,
1/5/1648:1655
No text annotation
Not in a motif group
geometric
IL_5TBW_028
IL_17470.5
IL_6P5N_1401/5/1550:1551,
1/5/1576:1578
Single bulged G
Not in a motif group
geometric
IL_4V9F_026
IL_59137.10
IL_6P5N_1411/5/1551:1555,
1/5/1572:1576
Triple sheared
Not in a motif group
homologous
IL_5TBW_030
IL_56467.6
IL_6P5N_1421/5/1586:1589,
1/5/1605:1607
Major groove platform with extra cWW
Not in a motif group
homologous
IL_5TBW_031
IL_95485.6
IL_6P5N_1431/5/1590:1592,
1/5/1603:1604
Single bulged U
Not in a motif group
homologous
IL_5TBW_032
IL_83039.11
IL_6P5N_1441/5/1624:1626,
1/5/1636:1640
Multiple bulged bases
Not in a motif group
homologous
IL_5TBW_033
IL_90991.5
IL_6P5N_1451/5/1671:1673,
1/5/1682:1684
No text annotation
Not in a motif group
homologous
IL_5TBW_034
IL_01312.13
IL_6P5N_1461/5/1686:1688,
1/5/1848:1851
No text annotation
Not in a motif group
IL_6P5N_1471/5/1694:1721,
1/5/1841:1842
No text annotation
Not in a motif group
IL_6P5N_1481/5/1723:1725,
1/5/1838:1839
Single bulged G
Not in a motif group
homologous
IL_5TBW_037
IL_59137.10
IL_6P5N_1491/5/1732:1737,
1/5/1792:1797
5x5 Sarcin-Ricin with intercalated A; G-bulge
Not in a motif group
geometric
IL_7A0S_027
IL_89193.1
IL_6P5N_1501/5/1737:1738,
1/5/1790:1792
Minor groove platform
Not in a motif group
geometric
IL_5TBW_039
IL_06437.11
IL_6P5N_1511/5/1739:1744,
1/5/1786:1789
C-loop
Not in a motif group
homologous
IL_5TBW_040
IL_63596.4
IL_6P5N_1521/5/1746:1749,
1/5/1781:1784
Tandem non-canonical cWW pairs
Not in a motif group
homologous
IL_5TBW_041
IL_85877.10
IL_6P5N_1531/5/1749:1751,
1/5/1779:1781
No text annotation
Not in a motif group
geometric
IL_5TBW_127
IL_01312.13
IL_6P5N_1541/5/1753:1758,
1/5/1774:1777
No text annotation
Not in a motif group
IL_6P5N_1551/5/1814:1816,
1/5/1823:1824
Single bulged A
Not in a motif group
homologous
IL_5TBW_045
IL_80007.16
IL_6P5N_1561/5/1858:1860,
1/5/1874:1876
No text annotation
Not in a motif group
homologous
IL_5TBW_046
IL_01312.13
IL_6P5N_1571/5/1905:1909,
1/5/2067:2071
UAA/GAN
Not in a motif group
homologous
IL_5TBW_048
IL_53523.5
IL_6P5N_1581/5/1911:1918,
1/5/2064:2065
SSU/LSU pseudoknot
Not in a motif group
homologous
IL_5TBW_049
IL_15861.6
IL_6P5N_1591/5/1918:1920,
1/5/2063:2064
No text annotation
Not in a motif group
IL_6P5N_1601/5/1920:1922,
1/5/2062:2063
No text annotation
Not in a motif group
IL_6P5N_1611/5/1926:1933,
1/5/2053:2058
No text annotation
Not in a motif group
geometric
IL_5TBW_051
IL_17971.1
IL_6P5N_1621/5/1933:1944,
1/5/2038:2053
No text annotation
Not in a motif group
homologous
IL_5TBW_052
IL_94878.1
IL_6P5N_1631/5/1946:1948,
1/5/2035:2036
Single bulged U
Not in a motif group
homologous
IL_5TBW_053
IL_83039.11
IL_6P5N_1641/5/1972:1977,
1/5/1989:1994
No text annotation
Not in a motif group
IL_6P5N_1651/5/2001:2005,
1/5/2014:2016
No text annotation
Not in a motif group
IL_6P5N_1661/5/2083:2085,
1/5/2272:2273
Single bulged U
Not in a motif group
geometric
IL_4LFB_046
IL_83039.11
IL_6P5N_1671/5/2290:2292,
1/5/2342:2345
Isolated cWS basepair
Not in a motif group
homologous
IL_5TBW_057
IL_01312.13
IL_6P5N_1681/5/2299:2301,
1/5/2334:2335
Single bulged A
Not in a motif group
homologous
IL_5TBW_058
IL_80007.16
IL_6P5N_1691/5/2302:2309,
1/5/2329:2333
Kink-turn
Not in a motif group
homologous
IL_5TBW_059
IL_29549.9
IL_6P5N_1701/5/2312:2314,
1/5/2325:2326
Single bulged A
Not in a motif group
homologous
IL_5TBW_060
IL_80007.16
IL_6P5N_1711/5/2358:2364,
1/5/3858:3863
7x6 Sarcin-Ricin; G-bulge
Not in a motif group
homologous
IL_5TBW_061
IL_35110.5
IL_6P5N_1721/5/2415:2419,
1/5/2427:2429
C-loop
Not in a motif group
geometric
IL_7A0S_047
IL_63596.4
IL_6P5N_1731/5/2446:2450,
1/5/2509:2514
UAA/GAN
Not in a motif group
homologous
IL_5TBW_063
IL_53523.5
IL_6P5N_1741/5/2542:2547,
1/5/2772:2774
Isolated non-canonical cWW with bulges
Not in a motif group
geometric
IL_5J7L_009
IL_55456.1
IL_6P5N_1751/5/2549:2550,
1/5/2768:2770
Single bulged U
Not in a motif group
geometric
IL_2R8S_004
IL_83039.11
IL_6P5N_1761/5/2589:2593,
1/5/2752:2756
Triple sheared
Not in a motif group
geometric
IL_7RQB_075
IL_56467.6
IL_6P5N_1771/5/2613:2614,
1/5/2724:2726
Single bulged C
Not in a motif group
homologous
IL_5TBW_069
IL_61258.10
IL_6P5N_1781/5/2614:2615,
1/5/2722:2724
Single stack bend
Not in a motif group
geometric
IL_5TBW_070
IL_72766.2
IL_6P5N_1791/5/2646:2648,
1/5/2685:2688
Isolated tHS basepair with bulges
Not in a motif group
geometric
IL_7RQB_012
IL_38958.6
IL_6P5N_1801/5/2651:2653,
1/5/2681:2682
Single bulged G
Not in a motif group
geometric
IL_2IZN_001
IL_59137.10
IL_6P5N_1811/5/2655:2662,
1/5/2672:2679
No text annotation
Not in a motif group
IL_6P5N_1821/5/2704:2705,
1/5/2710:2712
Single bulged G
Not in a motif group
geometric
IL_4LVW_002
IL_59137.10
IL_6P5N_1831/5/2832:2838,
1/5/3850:3853
No text annotation
Not in a motif group
homologous
IL_5TBW_074
IL_79393.8
IL_6P5N_1841/5/2844:2846,
1/5/3842:3844
Isolated tWW turn
Not in a motif group
homologous
IL_5TBW_075
IL_54997.5
IL_6P5N_1851/5/2847:2850,
1/5/3840:3841
Major groove platform; stack outside cWW
Not in a motif group
homologous
IL_5TBW_076
IL_80663.10
IL_6P5N_1861/5/2850:2855,
1/5/3837:3840
Intercalated tWH
Not in a motif group
geometric
IL_4V9F_062
IL_01312.13
IL_6P5N_1871/5/2867:2872,
1/5/2877:2883
tSH-tSH-tHH-tHS
Not in a motif group
geometric
IL_4V9F_063
IL_66584.5
IL_6P5N_1881/5/2889:2891,
1/5/3610:3612
No text annotation
Not in a motif group
homologous
IL_5TBW_079
IL_01312.13
IL_6P5N_1891/5/2896:2897,
1/5/3602:3605
No text annotation
Not in a motif group
homologous
IL_5TBW_080
IL_76195.1
IL_6P5N_1901/5/3632:3633,
1/5/3827:3829
Single bulged A
Not in a motif group
homologous
IL_5TBW_082
IL_80007.16
IL_6P5N_1911/5/3660:3665,
1/5/3677:3684
Kink-turn related
Not in a motif group
homologous
IL_5TBW_083
IL_95993.1
IL_6P5N_1921/5/3700:3703,
1/5/3749:3750
Major groove outside cWW, minor groove, intercalation pocket
Not in a motif group
homologous
IL_5TBW_084
IL_72766.2
IL_6P5N_1931/5/3704:3705,
1/5/3745:3748
Major groove outside cWW, minor groove, intercalation pocket
Not in a motif group
homologous
IL_5TBW_085
IL_13730.12
IL_6P5N_1941/5/3708:3710,
1/5/3741:3742
Single stack bend
Not in a motif group
geometric
IL_5TBW_070
IL_72766.2
IL_6P5N_1951/5/3710:3714,
1/5/3739:3741
No text annotation
Not in a motif group
IL_6P5N_1961/5/3715:3721,
1/5/3732:3738
No text annotation
Not in a motif group
homologous
IL_5TBW_088
IL_36973.5
IL_6P5N_1971/5/3780:3781,
1/5/3811:3814
No text annotation
Not in a motif group
geometric
IL_4V9F_070
IL_69632.1
IL_6P5N_1981/5/3781:3792,
1/5/3808:3811
No text annotation
Not in a motif group
homologous
IL_5TBW_090
IL_45481.1
IL_6P5N_1991/5/3895:3898,
1/5/4563:4565
Major groove platform with extra pair
Not in a motif group
homologous
IL_5TBW_091
IL_87630.5
IL_6P5N_2001/5/3900:3902,
1/5/4558:4561
Minor groove platform with intercalation
Not in a motif group
homologous
IL_5TBW_092
IL_86964.1
IL_6P5N_2011/5/3913:3915,
1/5/4388:4389
Single bulged U
Not in a motif group
homologous
IL_5TBW_093
IL_83039.11
IL_6P5N_2021/5/3916:3917,
1/5/4384:4387
Minor groove platform
Not in a motif group
homologous
IL_5TBW_094
IL_06437.11
IL_6P5N_2031/5/3927:3929,
1/5/4181:4184
Isolated tHS basepair with bulges
Not in a motif group
homologous
IL_5TBW_095
IL_38958.6
IL_6P5N_2041/5/3948:3953,
1/5/4059:4065
Tandem non-canonical cWW pairs with near WC pairs
Not in a motif group
geometric
IL_4EYA_005
IL_76308.3
IL_6P5N_2051/5/3954:3968,
1/5/4053:4058
No text annotation
Not in a motif group
IL_6P5N_2061/5/3968:3976,
1/5/4035:4053
No text annotation
Not in a motif group
IL_6P5N_2071/5/4082:4088,
1/5/4161:4164
No text annotation
Not in a motif group
homologous
IL_5TBW_096
IL_98353.1
IL_6P5N_2081/5/4191:4192,
1/5/4202:4204
Single bulged A
Not in a motif group
homologous
IL_5TBW_098
IL_80007.16
IL_6P5N_2091/5/4243:4245,
1/5/4263:4267
Isolated tHS basepair with bulges
Not in a motif group
homologous
IL_5TBW_099
IL_38958.6
IL_6P5N_2101/5/4291:4293,
1/5/4317:4318
Single bulged A
Not in a motif group
geometric
IL_5WWT_001
IL_80007.16
IL_6P5N_2111/5/4295:4298,
1/5/4312:4315
Tandem non-canonical cWW pairs
Not in a motif group
homologous
IL_5TBW_100
IL_85877.10
IL_6P5N_2121/5/4347:4350,
1/5/4364:4365
Single stack bend
Not in a motif group
geometric
IL_5J7L_032
IL_04038.4
IL_6P5N_2131/5/4400:4401,
1/5/4442:4444
Major groove platform
Not in