4V7P Internal, Hairpin and 3-way Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_4V7P_001 | 1/AA/12:22 | No text annotation Not in a motif group | homologous HL_4LFB_001 HL_89881.2 | |
| HL_4V7P_002 | 1/AA/81:88 | No text annotation Not in a motif group | homologous HL_4LFB_002 HL_30784.2 | |
| HL_4V7P_003 | 1/AA/102C:103B | No text annotation Not in a motif group | ||
| HL_4V7P_004 | 1/AA/158:163 | GNRA Not in a motif group | homologous HL_4LFB_003 HL_42097.1 | |
| HL_4V7P_005 | 1/AA/186G:191A | No text annotation Not in a motif group | homologous HL_4LFB_004 HL_10278.1 | |
| HL_4V7P_006 | 1/AA/201:216 | No text annotation Not in a motif group | ||
| HL_4V7P_007 | 1/AA/259:267 | No text annotation Not in a motif group | homologous HL_4LFB_006 HL_69023.2 | |
| HL_4V7P_008 | 1/AA/296:301 | GNRA Not in a motif group | homologous HL_4LFB_007 HL_42097.1 | |
| HL_4V7P_009 | 1/AA/320:333 | No text annotation Not in a motif group | homologous HL_4LFB_008 HL_81205.2 | |
| HL_4V7P_010 | 1/AA/342:347 | UNCG Not in a motif group | homologous HL_4LFB_009 HL_03562.2 | |
| HL_4V7P_011 | 1/AA/379:384 | GNRA Not in a motif group | homologous HL_4LFB_010 HL_42097.1 | |
| HL_4V7P_012 | 1/AA/419:424 | UNCG Not in a motif group | homologous HL_5J7L_011 HL_03562.2 | |
| HL_4V7P_013 | 1/AA/458:474 | No text annotation Not in a motif group | homologous HL_6CZR_083 HL_43656.2 | |
| HL_4V7P_014 | 1/AA/522:527 | No text annotation Not in a motif group | geometric HL_5J7L_143 HL_75407.1 | |
| HL_4V7P_015 | 1/AA/617:623 | No text annotation Not in a motif group | homologous HL_6CZR_085 HL_26881.1 | |
| HL_4V7P_016 | 1/AA/689:698 | No text annotation Not in a motif group | homologous HL_4LFB_015 HL_12326.1 | |
| HL_4V7P_017 | 1/AA/726:731 | Other HL Not in a motif group | homologous HL_4LFB_016 HL_87030.2 | |
| HL_4V7P_018 | 1/AA/786:796 | No text annotation Not in a motif group | homologous HL_4LFB_017 HL_12326.1 | |
| HL_4V7P_019 | 1/AA/838:848 | No text annotation Not in a motif group | homologous HL_6CZR_089 HL_53837.1 | |
| HL_4V7P_020 | 1/AA/862:867 | GNRA Not in a motif group | homologous HL_4LFB_019 HL_42097.1 | |
| HL_4V7P_021 | 1/AA/897:902 | GNRA Not in a motif group | homologous HL_6CZR_091 HL_42097.1 | |
| HL_4V7P_022 | 1/AA/963:972 | No text annotation Not in a motif group | homologous HL_4LFB_021 NA | |
| HL_4V7P_023 | 1/AA/1012:1017 | GNRA Not in a motif group | homologous HL_4LFB_022 HL_42097.1 | |
| HL_4V7P_024 | 1/AA/1027:1034 | No text annotation Not in a motif group | ||
| HL_4V7P_025 | 1/AA/1076:1081 | GNRA Not in a motif group | homologous HL_5J7L_023 HL_42097.1 | |
| HL_4V7P_026 | 1/AA/1089:1096 | No text annotation Not in a motif group | homologous HL_5J7L_024 HL_71554.2 | |
| HL_4V7P_027 | 1/AA/1134:1140 | No text annotation Not in a motif group | homologous HL_6CZR_097 NA | |
| HL_4V7P_028 | 1/AA/1165:1171 | GNRA Not in a motif group | homologous HL_4LFB_027 HL_42097.1 | |
| HL_4V7P_029 | 1/AA/1265:1270 | No text annotation Not in a motif group | homologous HL_6CZR_099 NA | |
| HL_4V7P_030 | 1/AA/1314:1323 | No text annotation Not in a motif group | homologous HL_4LFB_029 HL_89380.2 | |
| HL_4V7P_031 | 1/AA/1356:1366 | No text annotation Not in a motif group | ||
| HL_4V7P_032 | 1/AA/1449:1454 | UNCG Not in a motif group | homologous HL_5J7L_030 HL_03562.2 | |
| HL_4V7P_033 | 1/AA/1515:1520 | No text annotation Not in a motif group | homologous HL_4LFB_032 NA | |
| HL_4V7P_034 | 1/AW/13:22 | No text annotation Not in a motif group | homologous HL_4LCK_001 NA | |
| HL_4V7P_035 | 1/AW/31:39 | No text annotation Not in a motif group | homologous HL_6CFJ_107 NA | |
| HL_4V7P_036 | 1/AW/53:61 | T-loop with 2 stacked bulged bases Not in a motif group | homologous HL_4WT8_217 HL_22280.1 | |
| HL_4V7P_037 | 1/BA/59:68 | No text annotation Not in a motif group | homologous HL_7RQB_001 HL_99167.1 | |
| HL_4V7P_038 | 1/BA/87:95 | No text annotation Not in a motif group | homologous HL_7RQB_002 HL_96598.1 | |
| HL_4V7P_039 | 1/BA/123:128 | No text annotation Not in a motif group | homologous HL_5J7L_136 HL_75407.1 | |
| HL_4V7P_040 | 1/BA/137B:141B | No text annotation Not in a motif group | homologous HL_7RQB_004 HL_79921.2 | |
| HL_4V7P_041 | 1/BA/155:171 | No text annotation Not in a motif group | homologous HL_7A0S_005 HL_30784.2 | |
| HL_4V7P_042 | 1/BA/194:201 | No text annotation Not in a motif group | geometric HL_4WF9_006 HL_06192.2 | |
| HL_4V7P_043 | 1/BA/225:230 | No text annotation Not in a motif group | homologous HL_7RQB_007 HL_02862.2 | |
| HL_4V7P_044 | 1/BA/246:252 | No text annotation Not in a motif group | homologous HL_4WF9_008 HL_67216.7 | |
| HL_4V7P_045 | 1/BA/270L:270O | No text annotation Not in a motif group | ||
| HL_4V7P_046 | 1/BA/305:312 | No text annotation Not in a motif group | homologous HL_7RQB_010 HL_89380.2 | |
| HL_4V7P_047 | 1/BA/319:323 | No text annotation Not in a motif group | homologous HL_7RQB_011 HL_75407.1 | |
| HL_4V7P_048 | 1/BA/327:335 | No text annotation Not in a motif group | homologous HL_5J7L_144 HL_08002.8 | |
| HL_4V7P_049 | 1/BA/381:393 | No text annotation Not in a motif group | ||
| HL_4V7P_050 | 1/BA/410:417 | No text annotation Not in a motif group | homologous HL_7RQB_014 HL_96598.1 | |
| HL_4V7P_051 | 1/BA/462:467 | No text annotation Not in a motif group | homologous HL_7A0S_015 HL_42097.1 | |
| HL_4V7P_052 | 1/BA/487:493 | No text annotation Not in a motif group | homologous HL_7RQB_016 HL_42097.1 | |
| HL_4V7P_053 | 1/BA/544:549 | No text annotation Not in a motif group | geometric HL_7RQB_046 HL_42097.1 | |
| HL_4V7P_054 | 1/BA/566:575 | No text annotation Not in a motif group | homologous HL_7RQB_018 HL_89380.2 | |
| HL_4V7P_055 | 1/BA/611:617 | No text annotation Not in a motif group | homologous HL_7RQB_019 HL_32369.1 | |
| HL_4V7P_056 | 1/BA/629:634 | GNRA Not in a motif group | homologous HL_4WF9_020 HL_42097.1 | |
| HL_4V7P_057 | 1/BA/641:647 | GNRA with one bulged base Not in a motif group | homologous HL_4WF9_021 HL_42097.1 | |
| HL_4V7P_058 | 1/BA/712:719 | No text annotation Not in a motif group | homologous HL_7RQB_022 HL_84085.2 | |
| HL_4V7P_059 | 1/BA/744:753 | No text annotation Not in a motif group | homologous HL_7RQB_023 HL_39334.6 | |
| HL_4V7P_060 | 1/BA/779:785 | No text annotation Not in a motif group | homologous HL_7A0S_023 HL_27930.1 | |
| HL_4V7P_061 | 1/BA/826:831 | No text annotation Not in a motif group | homologous HL_7A0S_024 HL_64365.1 | |
| HL_4V7P_062 | 1/BA/884:892 | No text annotation Not in a motif group | homologous HL_7RQB_026 HL_27930.1 | |
| HL_4V7P_063 | 1/BA/955:962 | No text annotation Not in a motif group | homologous HL_7RQB_027 HL_42097.1 | |
| HL_4V7P_064 | 1/BA/978:985 | No text annotation Not in a motif group | homologous HL_7RQB_028 HL_64430.2 | |
| HL_4V7P_067 | 1/BA/1171:1178 | No text annotation Not in a motif group | ||
| HL_4V7P_068 | 1/BA/1222:1227 | GNRA Not in a motif group | geometric HL_4YAZ_003 HL_42097.1 | |
| HL_4V7P_069 | 1/BA/1281:1289 | No text annotation Not in a motif group | homologous HL_7RQB_033 HL_89380.2 | |
| HL_4V7P_070 | 1/BA/1324:1330 | No text annotation Not in a motif group | homologous HL_4WF9_033 HL_46680.1 | |
| HL_4V7P_071 | 1/BA/1363:1368 | No text annotation Not in a motif group | homologous HL_7RQB_035 HL_87030.2 | |
| HL_4V7P_072 | 1/BA/1389:1398 | No text annotation Not in a motif group | homologous HL_7RQB_036 HL_69023.2 | |
| HL_4V7P_073 | 1/BA/1450:1461 | No text annotation Not in a motif group | homologous HL_7A0S_036 HL_83808.1 | |
| HL_4V7P_074 | 1/BA/1492:1498 | No text annotation Not in a motif group | ||
| HL_4V7P_075 | 1/BA/1533:1538 | No text annotation Not in a motif group | geometric HL_1WZ2_007 HL_10278.1 | |
| HL_4V7P_076 | 1/BA/1565:1568 | No text annotation Not in a motif group | homologous HL_7A0S_039 HL_38927.2 | |
| HL_4V7P_077 | 1/BA/1612:1619 | No text annotation Not in a motif group | homologous HL_7A0S_040 HL_64430.2 | |
| HL_4V7P_078 | 1/BA/1630:1636 | No text annotation Not in a motif group | ||
| HL_4V7P_079 | 1/BA/1691:1696 | UNCG Not in a motif group | geometric HL_4JF2_003 HL_03562.2 | |
| HL_4V7P_080 | 1/BA/1727:1733 | No text annotation Not in a motif group | homologous HL_7RQB_043 HL_43656.2 | |
| HL_4V7P_081 | 1/BA/1752:1756 | No text annotation Not in a motif group | homologous HL_7RQB_044 HL_76539.2 | |
| HL_4V7P_082 | 1/BA/1777:1787 | No text annotation Not in a motif group | homologous HL_5J7L_178 HL_43613.5 | |
| HL_4V7P_083 | 1/BA/1806:1811 | No text annotation Not in a motif group | homologous HL_7RQB_046 HL_42097.1 | |
| HL_4V7P_084 | 1/BA/1864:1878 | No text annotation Not in a motif group | homologous HL_7RQB_047 HL_42097.1 | |
| HL_4V7P_085 | 1/BA/1910:1920 | No text annotation Not in a motif group | geometric HL_5TBW_049 HL_71924.2 | |
| HL_4V7P_086 | 1/BA/1949:1957 | No text annotation Not in a motif group | homologous HL_7RQB_049 HL_51824.1 | |
| HL_4V7P_087 | 1/BA/2027:2036 | No text annotation Not in a motif group | homologous HL_7RQB_050 HL_90642.6 | |
| HL_4V7P_089 | 1/BA/2209:2215 | No text annotation Not in a motif group | geometric HL_6U8D_003 HL_89098.1 | |
| HL_4V7P_090 | 1/BA/2248:2256 | No text annotation Not in a motif group | homologous HL_4WF9_049 HL_53171.2 | |
| HL_4V7P_091 | 1/BA/2264:2276 | No text annotation Not in a motif group | homologous HL_7RQB_054 HL_19870.6 | |
| HL_4V7P_092 | 1/BA/2303:2313 | No text annotation Not in a motif group | homologous HL_7A0S_054 HL_11805.3 | |
| HL_4V7P_093 | 1/BA/2324:2331 | No text annotation Not in a motif group | homologous HL_7RQB_056 HL_12078.2 | |
| HL_4V7P_094 | 1/BA/2355:2362 | No text annotation Not in a motif group | homologous HL_4WF9_053 HL_09136.1 | |
| HL_4V7P_095 | 1/BA/2374:2379 | No text annotation Not in a motif group | homologous HL_7A0S_057 HL_42097.1 | |
| HL_4V7P_096 | 1/BA/2404:2413 | No text annotation Not in a motif group | homologous HL_7RQB_059 HL_30784.2 | |
| HL_4V7P_097 | 1/BA/2471:2479 | No text annotation Not in a motif group | homologous HL_7RQB_060 HL_06192.2 | |
| HL_4V7P_098 | 1/BA/2528:2535 | No text annotation Not in a motif group | homologous HL_7RQB_061 HL_88526.2 | |
| HL_4V7P_099 | 1/BA/2551:2557 | No text annotation Not in a motif group | homologous HL_4WF9_058 HL_43656.2 | |
| HL_4V7P_100 | 1/BA/2594:2599 | No text annotation Not in a motif group | homologous HL_7RQB_063 HL_42097.1 | |
| HL_4V7P_101 | 1/BA/2658:2663 | GNRA Not in a motif group | geometric HL_5FJC_003 HL_42097.1 | |
| HL_4V7P_102 | 1/BA/2701:2706 | No text annotation Not in a motif group | homologous HL_7RQB_065 HL_53171.2 | |
| HL_4V7P_103 | 1/BA/2745:2759 | No text annotation Not in a motif group | homologous HL_7RQB_066 HL_56677.7 | |
| HL_4V7P_104 | 1/BA/2794:2802 | Other HL Not in a motif group | geometric HL_3AM1_002 HL_87030.2 | |
| HL_4V7P_105 | 1/BA/2819:2827 | No text annotation Not in a motif group | homologous HL_7RQB_068 HL_27930.1 | |
| HL_4V7P_106 | 1/BA/2856:2861 | No text annotation Not in a motif group | homologous HL_7RQB_069 HL_42097.1 | |
| HL_4V7P_107 | 1/BB/38:44 | No text annotation Not in a motif group | geometric HL_5TBW_006 HL_98984.2 | |
| HL_4V7P_108 | 1/BB/86:90 | No text annotation Not in a motif group | homologous HL_7RQB_071 HL_42097.1 | |
| HL_4V7P_109 | 1/CA/59:68 | No text annotation Not in a motif group | homologous HL_7RQB_001 HL_99167.1 | |
| HL_4V7P_110 | 1/CA/87:95 | No text annotation Not in a motif group | homologous HL_7RQB_002 HL_96598.1 | |
| HL_4V7P_111 | 1/CA/123:128 | No text annotation Not in a motif group | geometric HL_5J7L_136 HL_75407.1 | |
| HL_4V7P_112 | 1/CA/137B:141B | No text annotation Not in a motif group | homologous HL_7RQB_004 HL_79921.2 | |
| HL_4V7P_113 | 1/CA/155:171 | No text annotation Not in a motif group | homologous HL_7A0S_005 HL_30784.2 | |
| HL_4V7P_114 | 1/CA/194:201 | No text annotation Not in a motif group | geometric HL_4WF9_006 HL_06192.2 | |
| HL_4V7P_115 | 1/CA/225:230 | No text annotation Not in a motif group | homologous HL_7RQB_007 HL_02862.2 | |
| HL_4V7P_116 | 1/CA/246:252 | No text annotation Not in a motif group | homologous HL_4WF9_008 HL_67216.7 | |
| HL_4V7P_117 | 1/CA/270L:270O | No text annotation Not in a motif group | ||
| HL_4V7P_118 | 1/CA/305:312 | No text annotation Not in a motif group | homologous HL_7RQB_010 HL_89380.2 | |
| HL_4V7P_119 | 1/CA/319:323 | No text annotation Not in a motif group | homologous HL_7RQB_011 HL_75407.1 | |
| HL_4V7P_120 | 1/CA/327:335 | No text annotation Not in a motif group | homologous HL_5J7L_144 HL_08002.8 | |
| HL_4V7P_121 | 1/CA/381:393 | No text annotation Not in a motif group | ||
| HL_4V7P_122 | 1/CA/410:417 | No text annotation Not in a motif group | homologous HL_7RQB_014 HL_96598.1 | |
| HL_4V7P_123 | 1/CA/462:467 | No text annotation Not in a motif group | homologous HL_7A0S_015 HL_42097.1 | |
| HL_4V7P_124 | 1/CA/487:493 | No text annotation Not in a motif group | homologous HL_7RQB_016 HL_42097.1 | |
| HL_4V7P_125 | 1/CA/544:549 | No text annotation Not in a motif group | geometric HL_7RQB_046 HL_42097.1 | |
| HL_4V7P_126 | 1/CA/566:575 | No text annotation Not in a motif group | homologous HL_7RQB_018 HL_89380.2 | |
| HL_4V7P_127 | 1/CA/611:617 | No text annotation Not in a motif group | homologous HL_7RQB_019 HL_32369.1 | |
| HL_4V7P_128 | 1/CA/629:634 | GNRA Not in a motif group | homologous HL_4WF9_020 HL_42097.1 | |
| HL_4V7P_129 | 1/CA/641:647 | GNRA with one bulged base Not in a motif group | homologous HL_4WF9_021 HL_42097.1 | |
| HL_4V7P_130 | 1/CA/712:719 | No text annotation Not in a motif group | homologous HL_7RQB_022 HL_84085.2 | |
| HL_4V7P_131 | 1/CA/744:753 | No text annotation Not in a motif group | homologous HL_7RQB_023 HL_39334.6 | |
| HL_4V7P_132 | 1/CA/779:785 | No text annotation Not in a motif group | homologous HL_7A0S_023 HL_27930.1 | |
| HL_4V7P_133 | 1/CA/826:831 | No text annotation Not in a motif group | homologous HL_7A0S_024 HL_64365.1 | |
| HL_4V7P_134 | 1/CA/884:892 | No text annotation Not in a motif group | homologous HL_7RQB_026 HL_27930.1 | |
| HL_4V7P_135 | 1/CA/955:962 | No text annotation Not in a motif group | homologous HL_7RQB_027 HL_42097.1 | |
| HL_4V7P_136 | 1/CA/978:985 | No text annotation Not in a motif group | homologous HL_7RQB_028 HL_64430.2 | |
| HL_4V7P_137 | 1/CA/1064:1074 | No text annotation Not in a motif group | homologous HL_5J7L_161 HL_07145.1 | |
| HL_4V7P_139 | 1/CA/1171:1178 | No text annotation Not in a motif group | ||
| HL_4V7P_140 | 1/CA/1222:1227 | No text annotation Not in a motif group | homologous HL_7RQB_032 HL_42097.1 | |
| HL_4V7P_141 | 1/CA/1281:1289 | No text annotation Not in a motif group | homologous HL_7RQB_033 HL_89380.2 | |
| HL_4V7P_142 | 1/CA/1324:1330 | No text annotation Not in a motif group | homologous HL_4WF9_033 HL_46680.1 | |
| HL_4V7P_143 | 1/CA/1363:1368 | No text annotation Not in a motif group | homologous HL_7RQB_035 HL_87030.2 | |
| HL_4V7P_144 | 1/CA/1389:1398 | No text annotation Not in a motif group | homologous HL_7RQB_036 HL_69023.2 | |
| HL_4V7P_145 | 1/CA/1450:1461 | No text annotation Not in a motif group | homologous HL_7A0S_036 HL_83808.1 | |
| HL_4V7P_146 | 1/CA/1492:1498 | No text annotation Not in a motif group | ||
| HL_4V7P_147 | 1/CA/1533:1538 | No text annotation Not in a motif group | geometric HL_1WZ2_007 HL_10278.1 | |
| HL_4V7P_148 | 1/CA/1565:1568 | No text annotation Not in a motif group | homologous HL_7A0S_039 HL_38927.2 | |
| HL_4V7P_149 | 1/CA/1612:1619 | No text annotation Not in a motif group | homologous HL_7A0S_040 HL_64430.2 | |
| HL_4V7P_150 | 1/CA/1630:1636 | No text annotation Not in a motif group | ||
| HL_4V7P_151 | 1/CA/1691:1696 | No text annotation Not in a motif group | homologous HL_7RQB_042 HL_03562.2 | |
| HL_4V7P_152 | 1/CA/1727:1733 | No text annotation Not in a motif group | homologous HL_7RQB_043 HL_43656.2 | |
| HL_4V7P_153 | 1/CA/1752:1756 | No text annotation Not in a motif group | homologous HL_7RQB_044 HL_76539.2 | |
| HL_4V7P_154 | 1/CA/1777:1787 | No text annotation Not in a motif group | homologous HL_5J7L_178 HL_43613.5 | |
| HL_4V7P_155 | 1/CA/1806:1811 | No text annotation Not in a motif group | homologous HL_7RQB_046 HL_42097.1 | |
| HL_4V7P_156 | 1/CA/1864:1878 | No text annotation Not in a motif group | homologous HL_7RQB_047 HL_42097.1 | |
| HL_4V7P_157 | 1/CA/1910:1920 | No text annotation Not in a motif group | geometric HL_5TBW_049 HL_71924.2 | |
| HL_4V7P_158 | 1/CA/1949:1957 | No text annotation Not in a motif group | homologous HL_7RQB_049 HL_51824.1 | |
| HL_4V7P_159 | 1/CA/2027:2036 | No text annotation Not in a motif group | homologous HL_7RQB_050 HL_90642.6 | |
| HL_4V7P_160 | 1/CA/2143:2148 | No text annotation Not in a motif group | homologous HL_7RQB_051 NA | |
| HL_4V7P_162 | 1/CA/2248:2256 | No text annotation Not in a motif group | homologous HL_4WF9_049 HL_53171.2 | |
| HL_4V7P_163 | 1/CA/2264:2276 | No text annotation Not in a motif group | homologous HL_7RQB_054 HL_19870.6 | |
| HL_4V7P_164 | 1/CA/2303:2313 | No text annotation Not in a motif group | homologous HL_7A0S_054 HL_11805.3 | |
| HL_4V7P_165 | 1/CA/2324:2331 | No text annotation Not in a motif group | homologous HL_7RQB_056 HL_12078.2 | |
| HL_4V7P_166 | 1/CA/2355:2362 | No text annotation Not in a motif group | homologous HL_4WF9_053 HL_09136.1 | |
| HL_4V7P_167 | 1/CA/2374:2379 | No text annotation Not in a motif group | homologous HL_7A0S_057 HL_42097.1 | |
| HL_4V7P_168 | 1/CA/2404:2413 | No text annotation Not in a motif group | homologous HL_7RQB_059 HL_30784.2 | |
| HL_4V7P_169 | 1/CA/2471:2479 | No text annotation Not in a motif group | homologous HL_7RQB_060 HL_06192.2 | |
| HL_4V7P_170 | 1/CA/2528:2535 | No text annotation Not in a motif group | homologous HL_7RQB_061 HL_88526.2 | |
| HL_4V7P_171 | 1/CA/2551:2557 | No text annotation Not in a motif group | homologous HL_4WF9_058 HL_43656.2 | |
| HL_4V7P_172 | 1/CA/2594:2599 | No text annotation Not in a motif group | homologous HL_7RQB_063 HL_42097.1 | |
| HL_4V7P_173 | 1/CA/2658:2663 | GNRA Not in a motif group | geometric HL_5FJC_003 HL_42097.1 | |
| HL_4V7P_174 | 1/CA/2701:2706 | No text annotation Not in a motif group | homologous HL_7RQB_065 HL_53171.2 | |
| HL_4V7P_175 | 1/CA/2745:2759 | No text annotation Not in a motif group | homologous HL_7RQB_066 HL_56677.7 | |
| HL_4V7P_176 | 1/CA/2794:2802 | Other HL Not in a motif group | geometric HL_3AM1_002 HL_87030.2 | |
| HL_4V7P_177 | 1/CA/2819:2827 | No text annotation Not in a motif group | homologous HL_7RQB_068 HL_27930.1 | |
| HL_4V7P_178 | 1/CA/2856:2861 | No text annotation Not in a motif group | homologous HL_7RQB_069 HL_42097.1 | |
| HL_4V7P_179 | 1/CB/38:44 | No text annotation Not in a motif group | geometric HL_5TBW_006 HL_98984.2 | |
| HL_4V7P_180 | 1/CB/86:90 | No text annotation Not in a motif group | homologous HL_7RQB_071 HL_42097.1 | |
| HL_4V7P_181 | 1/DA/12:22 | No text annotation Not in a motif group | homologous HL_4LFB_001 HL_89881.2 | |
| HL_4V7P_182 | 1/DA/81:88 | No text annotation Not in a motif group | homologous HL_4LFB_002 HL_30784.2 | |
| HL_4V7P_184 | 1/DA/158:163 | GNRA Not in a motif group | homologous HL_4LFB_003 HL_42097.1 | |
| HL_4V7P_185 | 1/DA/186G:191A | No text annotation Not in a motif group | homologous HL_4LFB_004 HL_10278.1 | |
| HL_4V7P_186 | 1/DA/201:216 | No text annotation Not in a motif group | ||
| HL_4V7P_187 | 1/DA/259:267 | No text annotation Not in a motif group | homologous HL_4LFB_006 HL_69023.2 | |
| HL_4V7P_188 | 1/DA/296:301 | GNRA Not in a motif group | homologous HL_4LFB_007 HL_42097.1 | |
| HL_4V7P_189 | 1/DA/320:333 | No text annotation Not in a motif group | homologous HL_4LFB_008 HL_81205.2 | |
| HL_4V7P_190 | 1/DA/342:347 | UNCG Not in a motif group | homologous HL_4LFB_009 HL_03562.2 | |
| HL_4V7P_191 | 1/DA/379:384 | GNRA Not in a motif group | homologous HL_4LFB_010 HL_42097.1 | |
| HL_4V7P_192 | 1/DA/419:424 | UNCG Not in a motif group | homologous HL_5J7L_011 HL_03562.2 | |
| HL_4V7P_193 | 1/DA/458:474 | No text annotation Not in a motif group | homologous HL_6CZR_083 HL_43656.2 | |
| HL_4V7P_194 | 1/DA/522:527 | No text annotation Not in a motif group | geometric HL_5J7L_143 HL_75407.1 | |
| HL_4V7P_195 | 1/DA/617:623 | No text annotation Not in a motif group | homologous HL_6CZR_085 HL_26881.1 | |
| HL_4V7P_196 | 1/DA/689:698 | No text annotation Not in a motif group | homologous HL_4LFB_015 HL_12326.1 | |
| HL_4V7P_198 | 1/DA/786:796 | No text annotation Not in a motif group | homologous HL_4LFB_017 HL_12326.1 | |
| HL_4V7P_199 | 1/DA/838:848 | No text annotation Not in a motif group | homologous HL_6CZR_089 HL_53837.1 | |
| HL_4V7P_200 | 1/DA/862:867 | GNRA Not in a motif group | homologous HL_4LFB_019 HL_42097.1 | |
| HL_4V7P_201 | 1/DA/897:902 | GNRA Not in a motif group | homologous HL_6CZR_091 HL_42097.1 | |
| HL_4V7P_202 | 1/DA/963:972 | No text annotation Not in a motif group | homologous HL_4LFB_021 NA | |
| HL_4V7P_203 | 1/DA/1012:1017 | GNRA Not in a motif group | homologous HL_4LFB_022 HL_42097.1 | |
| HL_4V7P_204 | 1/DA/1027:1034 | No text annotation Not in a motif group | ||
| HL_4V7P_205 | 1/DA/1076:1081 | GNRA Not in a motif group | homologous HL_5J7L_023 HL_42097.1 | |
| HL_4V7P_206 | 1/DA/1089:1096 | No text annotation Not in a motif group | homologous HL_5J7L_024 HL_71554.2 | |
| HL_4V7P_207 | 1/DA/1134:1140 | No text annotation Not in a motif group | homologous HL_6CZR_097 NA | |
| HL_4V7P_208 | 1/DA/1165:1171 | GNRA Not in a motif group | homologous HL_4LFB_027 HL_42097.1 | |
| HL_4V7P_209 | 1/DA/1265:1270 | No text annotation Not in a motif group | homologous HL_6CZR_099 NA | |
| HL_4V7P_210 | 1/DA/1314:1323 | No text annotation Not in a motif group | homologous HL_4LFB_029 HL_89380.2 | |
| HL_4V7P_211 | 1/DA/1356:1366 | No text annotation Not in a motif group | ||
| HL_4V7P_212 | 1/DA/1449:1454 | UNCG Not in a motif group | homologous HL_5J7L_030 HL_03562.2 | |
| HL_4V7P_213 | 1/DA/1515:1520 | No text annotation Not in a motif group | homologous HL_4LFB_032 NA | |
| HL_4V7P_214 | 1/DW/13:22 | No text annotation Not in a motif group | homologous HL_4LCK_001 NA | |
| HL_4V7P_215 | 1/DW/31:39 | No text annotation Not in a motif group | homologous HL_6CFJ_107 NA | |
| HL_4V7P_216 | 1/DW/53:61 | T-loop with 2 stacked bulged bases Not in a motif group | homologous HL_4WT8_217 HL_22280.1 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_4V7P_065 | No text annotation | ||
| HL_4V7P_066 | No text annotation | ||
| HL_4V7P_088 | No text annotation | ||
| HL_4V7P_138 | No text annotation | ||
| HL_4V7P_161 | No text annotation | ||
| HL_4V7P_183 | No text annotation | ||
| HL_4V7P_197 | Other HL |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_4V7P_001 | 1/AA/30:32, 1/AA/552:553 | Single bulged G Not in a motif group | homologous IL_4LFB_001 IL_00225.2 | |
| IL_4V7P_002 | 1/AA/44:45, 1/AA/396:398 | Single bulged A Not in a motif group | homologous IL_4LFB_002 IL_37497.2 | |
| IL_4V7P_003 | 1/AA/47:52, 1/AA/359:361 | No text annotation Not in a motif group | homologous IL_4LFB_003 IL_11178.1 | |
| IL_4V7P_004 | 1/AA/54:56, 1/AA/356:357 | Minor groove platform Not in a motif group | homologous IL_4LFB_004 IL_93353.1 | |
| IL_4V7P_005 | 1/AA/67:69, 1/AA/99:102 | No text annotation Not in a motif group | homologous IL_4LFB_006 IL_95997.1 | |
| IL_4V7P_006 | 1/AA/75:77, 1/AA/92:95 | Isolated cWH basepair Not in a motif group | geometric IL_4J50_001 IL_51629.2 | |
| IL_4V7P_007 | 1/AA/79:81, 1/AA/88:90 | No text annotation Not in a motif group | geometric IL_5TBW_016 IL_51629.2 | |
| IL_4V7P_008 | 1/AA/129A:131, 1/AA/231:232 | Multiple bulged bases Not in a motif group | homologous IL_4LFB_007 IL_16396.2 | |
| IL_4V7P_009 | 1/AA/132:136, 1/AA/227:230 | No text annotation Not in a motif group | geometric IL_4LFB_008 IL_58764.3 | |
| IL_4V7P_011 | 1/AA/148:153, 1/AA/168:174 | tWH-tWH-tHW-tHW Not in a motif group | homologous IL_4LFB_009 IL_39753.1 | |
| IL_4V7P_012 | 1/AA/186A:186C, 1/AA/191E:191G | No text annotation Not in a motif group | homologous IL_4LFB_010 IL_95997.1 | |
| IL_4V7P_013 | 1/AA/242:247, 1/AA/277:284 | Kink-turn with non-sequential stacking Not in a motif group | homologous IL_4LFB_011 IL_45067.2 | |
| IL_4V7P_014 | 1/AA/249:252, 1/AA/274:275 | No text annotation Not in a motif group | homologous IL_4LFB_012 IL_48100.2 | |
| IL_4V7P_015 | 1/AA/292:293, 1/AA/304:308 | C-loop Not in a motif group | homologous IL_4LFB_013 IL_37712.2 | |
| IL_4V7P_016 | 1/AA/367:369, 1/AA/392:393 | Single bulged U Not in a motif group | homologous IL_4LFB_014 IL_83039.13 | |
| IL_4V7P_017 | 1/AA/371:375, 1/AA/389:390 | C-loop Not in a motif group | geometric IL_5J7L_018 IL_75255.1 | |
| IL_4V7P_018 | 1/AA/375:376, 1/AA/387:389 | Single bulged G Not in a motif group | homologous IL_5J7L_019 IL_00225.2 | |
| IL_4V7P_019 | 1/AA/409:416, 1/AA/427:433 | No text annotation Not in a motif group | homologous IL_4LFB_017 IL_28026.1 | |
| IL_4V7P_020 | 1/AA/446:450, 1/AA/483:488 | 6x5 Sarcin-Ricin; G-bulge Not in a motif group | homologous IL_6CZR_130 IL_88269.3 | |
| IL_4V7P_021 | 1/AA/450:455, 1/AA/477:483 | No text annotation Not in a motif group | geometric IL_4LFB_019 IL_11882.1 | |
| IL_4V7P_022 | 1/AA/504:511, 1/AA/540:541 | SSU/LSU pseudoknot Not in a motif group | homologous IL_4LFB_020 IL_15861.7 | |
| IL_4V7P_023 | 1/AA/515:521, 1/AA/528:536 | No text annotation Not in a motif group | geometric IL_4V88_415 IL_55871.1 | |
| IL_4V7P_024 | 1/AA/569:575, 1/AA/880:881 | No text annotation Not in a motif group | homologous IL_4LFB_022 IL_69996.1 | |
| IL_4V7P_025 | 1/AA/580:584, 1/AA/757:761 | tSH-tHW-tHS Not in a motif group | homologous IL_4LFB_023 IL_17136.1 | |
| IL_4V7P_026 | 1/AA/594:596, 1/AA/644:645 | Major groove platform Not in a motif group | homologous IL_4LFB_024 IL_27635.1 | |
| IL_4V7P_027 | 1/AA/597:598, 1/AA/640:643 | Major groove minor groove platform; mini C-loop Not in a motif group | homologous IL_5J7L_029 IL_09061.6 | |
| IL_4V7P_028 | 1/AA/605:612, 1/AA/628:633 | No text annotation Not in a motif group | homologous IL_4LFB_026 IL_78349.1 | |
| IL_4V7P_029 | 1/AA/654:655, 1/AA/751:754 | Major groove platform; stack outside cWW Not in a motif group | homologous IL_4LFB_027 IL_50694.2 | |
| IL_4V7P_030 | 1/AA/657:658, 1/AA/747:749 | Major groove platform Not in a motif group | homologous IL_4LFB_028 IL_27635.1 | |
| IL_4V7P_031 | 1/AA/662:666, 1/AA/740:743 | Tandem non-canonical cWW pairs Not in a motif group | homologous IL_5J7L_033 IL_71110.1 | |
| IL_4V7P_032 | 1/AA/673:678, 1/AA/712:717 | No text annotation Not in a motif group | homologous IL_4LFB_030 IL_04668.1 | |
| IL_4V7P_033 | 1/AA/683:688, 1/AA/699:707 | Kink-turn Not in a motif group | homologous IL_4LFB_031 IL_37722.1 | |
| IL_4V7P_034 | 1/AA/774:778, 1/AA/804:805 | Left turn Not in a motif group | homologous IL_4LFB_032 IL_29346.1 | |
| IL_4V7P_035 | 1/AA/779:783, 1/AA/799:803 | tSH-tHW-tHS Not in a motif group | homologous IL_4LFB_033 IL_17136.1 | |
| IL_4V7P_036 | 1/AA/887:894, 1/AA/905:910 | 8x6 Sarcin-Ricin with inserted Y; G-bulge Not in a motif group | homologous IL_4LFB_034 IL_24606.2 | |
| IL_4V7P_037 | 1/AA/922:923, 1/AA/1393:1395 | Single bulged A Not in a motif group | homologous IL_5J7L_039 IL_37497.2 | |
| IL_4V7P_038 | 1/AA/925:927, 1/AA/1390:1391 | Single bulged G Not in a motif group | homologous IL_4LFB_036 IL_00225.2 | |
| IL_4V7P_039 | 1/AA/933:935, 1/AA/1380:1384 | Minor groove platform Not in a motif group | homologous IL_5J7L_041 IL_47078.1 | |
| IL_4V7P_040 | 1/AA/953:954, 1/AA/1226:1228 | No text annotation Not in a motif group | homologous IL_6CZR_150 NA | |
| IL_4V7P_041 | 1/AA/993:997, 1/AA/1044:1045 | Minor groove platform Not in a motif group | homologous IL_4LFB_039 IL_47078.1 | |
| IL_4V7P_042 | 1/AA/1048:1050, 1/AA/1208:1209 | No text annotation Not in a motif group | homologous IL_6CZR_152 NA | |
| IL_4V7P_043 | 1/AA/1052:1056, 1/AA/1204:1206 | Isolated cWS basepair Not in a motif group | homologous IL_4LFB_044 IL_76319.2 | |
| IL_4V7P_044 | 1/AA/1057:1058, 1/AA/1199:1203 | Minor groove platform Not in a motif group | homologous IL_5J7L_048 IL_93353.1 | |
| IL_4V7P_045 | 1/AA/1060:1061, 1/AA/1195:1197 | Single bulged U Not in a motif group | homologous IL_6CZR_156 IL_83039.13 | |
| IL_4V7P_046 | 1/AA/1061:1063, 1/AA/1193:1195 | No text annotation Not in a motif group | geometric IL_4LFB_047 IL_95997.1 | |
| IL_4V7P_047 | 1/AA/1124:1127, 1/AA/1145:1149 | No text annotation Not in a motif group | ||
| IL_4V7P_048 | 1/AA/1127:1128, 1/AA/1143:1145 | Single stack bend Not in a motif group | geometric IL_7A0S_005 IL_76488.2 | |
| IL_4V7P_049 | 1/AA/1128:1132, 1/AA/1142:1143 | Minor groove platform Not in a motif group | geometric IL_4LFB_049 IL_15052.1 | |
| IL_4V7P_050 | 1/AA/1158:1161, 1/AA/1175:1181 | No text annotation Not in a motif group | homologous IL_5J7L_053 IL_42032.1 | |
| IL_4V7P_051 | 1/AA/1246:1253, 1/AA/1284:1291 | No text annotation Not in a motif group | ||
| IL_4V7P_052 | 1/AA/1255:1258, 1/AA/1277:1282 | No text annotation Not in a motif group | homologous IL_4LFB_052 IL_84205.1 | |
| IL_4V7P_053 | 1/AA/1259:1262, 1/AA/1273:1276 | Double sheared Not in a motif group | geometric IL_5J7L_256 IL_09705.9 | |
| IL_4V7P_054 | 1/AA/1303:1308, 1/AA/1329:1334 | No text annotation Not in a motif group | homologous IL_4LFB_055 IL_19954.2 | |
| IL_4V7P_055 | 1/AA/1399:1401, 1/AA/1501:1504 | No text annotation Not in a motif group | geometric IL_4V88_463 IL_36143.3 | |
| IL_4V7P_056 | 1/AA/1401:1404, 1/AA/1497:1501 | No text annotation Not in a motif group | geometric IL_4V88_464 IL_99670.1 | |
| IL_4V7P_057 | 1/AA/1405:1407, 1/AA/1494:1496 | No text annotation Not in a motif group | geometric IL_4WF9_020 IL_95997.1 | |
| IL_4V7P_058 | 1/AA/1407:1409, 1/AA/1491:1494 | Decoding loop related Not in a motif group | geometric IL_3C3Z_002 IL_64417.1 | |
| IL_4V7P_059 | 1/AA/1412:1414, 1/AA/1486:1488 | No text annotation Not in a motif group | homologous IL_5J7L_061 IL_95997.1 | |
| IL_4V7P_060 | 1/AA/1416:1419, 1/AA/1481:1484 | Double sheared Not in a motif group | homologous IL_5J7L_062 IL_09705.9 | |
| IL_4V7P_061 | 1/AA/1431:1435, 1/AA/1466:1469 | UAA/GAN variation Not in a motif group | geometric IL_4LFB_062 IL_07235.1 | |
| IL_4V7P_062 | 1/AA/1435:1437, 1/AA/1464:1466 | No text annotation Not in a motif group | homologous IL_4LFB_063 IL_95997.1 | |
| IL_4V7P_063 | 1/AA/1440:1447, 1/AA/1459:1461 | Isolated basepair with bulged bases Not in a motif group | homologous IL_6CZR_172 IL_92788.2 | |
| IL_4V7P_064 | 1/BA/24:30, 1/BA/510:516 | Triple sheared with non-canonical cWW Not in a motif group | homologous IL_7RQB_001 IL_66414.6 | |
| IL_4V7P_065 | 1/BA/36:37, 1/BA/442:444 | Single bulged A Not in a motif group | homologous IL_7A0S_002 IL_37497.2 | |
| IL_4V7P_066 | 1/BA/43:45, 1/BA/433:436 | Major groove platform with extra cWW Not in a motif group | geometric IL_4V9F_003 IL_18471.2 | |
| IL_4V7P_067 | 1/BA/55:56, 1/BA/114:115 | No text annotation Not in a motif group | ||
| IL_4V7P_068 | 1/BA/81:85, 1/BA/97:105 | Kink-turn Not in a motif group | homologous IL_7RQB_004 IL_45067.2 | |
| IL_4V7P_069 | 1/BA/122:123, 1/BA/128:129 | No text annotation Not in a motif group | ||
| IL_4V7P_070 | 1/BA/134:135, 1/BA/144:145 | No text annotation Not in a motif group | ||
| IL_4V7P_071 | 1/BA/154:155, 1/BA/171:172 | No text annotation Not in a motif group | homologous HL_7RQB_005 NA | |
| IL_4V7P_072 | 1/BA/183:184, 1/BA/212:214 | Single stack bend Not in a motif group | homologous IL_7RQB_005 IL_76488.2 | |
| IL_4V7P_073 | 1/BA/188:194, 1/BA/201:208 | 8x7 Sarcin-Ricin; G-bulge Not in a motif group | homologous IL_7RQB_006 IL_04346.7 | |
| IL_4V7P_074 | 1/BA/239:245, 1/BA/253:258 | 7x6 Sarcin-Ricin; G-bulge Not in a motif group | homologous IL_7RQB_007 IL_76042.2 | |
| IL_4V7P_075 | 1/BA/270K:270L, 1/BA/270O:270Q | No text annotation Not in a motif group | ||
| IL_4V7P_077 | 1/BA/273A:273B, 1/BA/363F:364 | Major groove platform Not in a motif group | homologous IL_7RQB_009 IL_27635.1 | |
| IL_4V7P_078 | 1/BA/273G:279, 1/BA/361:363A | No text annotation Not in a motif group | ||
| IL_4V7P_079 | 1/BA/280:284, 1/BA/357:360 | tSH-tHW Not in a motif group | homologous IL_7RQB_011 IL_04059.1 | |
| IL_4V7P_080 | 1/BA/288:290, 1/BA/350:353 | Isolated tHS basepair with bulges Not in a motif group | homologous IL_7RQB_012 IL_38958.7 | |
| IL_4V7P_081 | 1/BA/293:295, 1/BA/343:347 | No text annotation Not in a motif group | homologous IL_7RQB_013 IL_69440.1 | |
| IL_4V7P_082 | 1/BA/481:484, 1/BA/496:509 | No text annotation Not in a motif group | homologous IL_7RQB_014 IL_60992.6 | |
| IL_4V7P_083 | 1/BA/564:566, 1/BA/575:577 | No text annotation Not in a motif group | geometric IL_4WF9_017 IL_95997.1 | |
| IL_4V7P_084 | 1/BA/606:609B, 1/BA/618B:622 | AAA cross-strand stack Not in a motif group | homologous IL_7RQB_016 IL_17136.1 | |
| IL_4V7P_085 | 1/BA/672:674, 1/BA/806:808 | No text annotation Not in a motif group | homologous IL_7RQB_017 IL_95997.1 | |
| IL_4V7P_086 | 1/BA/674:678, 1/BA/799:806 | tHW-tHW cross-strand stack Not in a motif group | geometric IL_4WF9_021 IL_17470.6 | |
| IL_4V7P_087 | 1/BA/697:698, 1/BA/763:765 | Single bulged A Not in a motif group | geometric IL_7RQB_019 IL_37497.2 | |
| IL_4V7P_088 | 1/BA/702:703, 1/BA/728:730 | Single bulged G Not in a motif group | homologous IL_7A0S_017 IL_00225.2 | |
| IL_4V7P_089 | 1/BA/703:707, 1/BA/724:728 | Triple sheared Not in a motif group | geometric IL_7RQB_021 IL_56467.8 | |
| IL_4V7P_090 | 1/BA/738:741, 1/BA/756:758 | Major groove platform with extra cWW Not in a motif group | homologous IL_7RQB_022 IL_05564.2 | |
| IL_4V7P_091 | 1/BA/775:777, 1/BA/787:791 | Multiple bulged bases Not in a motif group | homologous IL_4WF9_027 IL_90991.6 | |
| IL_4V7P_092 | 1/BA/837:838, 1/BA/940:942 | Single stack bend Not in a motif group | homologous IL_5J7L_266 IL_92001.1 | |
| IL_4V7P_093 | 1/BA/844:846, 1/BA/931:934 | Intercalated cWW Not in a motif group | geometric IL_7RQB_025 IL_52767.2 | |
| IL_4V7P_094 | 1/BA/846:850, 1/BA/928:931 | No text annotation Not in a motif group | homologous IL_7RQB_026 IL_94165.1 | |
| IL_4V7P_095 | 1/BA/858:862, 1/BA/915:919 | 5x5 Sarcin-Ricin with intercalated A; G-bulge Not in a motif group | geometric IL_7RQB_027 IL_38862.1 | |
| IL_4V7P_096 | 1/BA/862:863, 1/BA/913:915 | Minor groove platform Not in a motif group | homologous IL_4WF9_032 IL_42622.2 | |
| IL_4V7P_097 | 1/BA/864:868, 1/BA/909:912 | C-loop Not in a motif group | homologous IL_7RQB_029 IL_02509.1 | |
| IL_4V7P_098 | 1/BA/870:872, 1/BA/905:907 | Isolated cWS basepair Not in a motif group | homologous IL_7RQB_030 IL_52767.2 | |
| IL_4V7P_099 | 1/BA/875:877, 1/BA/899:902 | Minor groove platform with extra cWW Not in a motif group | geometric IL_7RQB_031 IL_46796.1 | |
| IL_4V7P_100 | 1/BA/877:879, 1/BA/898:899 | Not an internal loop Not in a motif group | geometric IL_4LFB_053 IL_93353.1 | |
| IL_4V7P_101 | 1/BA/880:881, 1/BA/895:897 | Single bulged A Not in a motif group | homologous IL_7RQB_033 IL_37497.2 | |
| IL_4V7P_102 | 1/BA/952:954, 1/BA/963:965 | No text annotation Not in a motif group | homologous IL_7RQB_034 IL_95997.1 | |
| IL_4V7P_103 | 1/BA/994:996, 1/BA/1159:1160 | Single bulged C Not in a motif group | homologous IL_7RQB_035 IL_61258.12 | |
| IL_4V7P_104 | 1/BA/998:1002, 1/BA/1153:1157 | UAA/GAN Not in a motif group | homologous IL_7RQB_036 IL_89002.2 | |
| IL_4V7P_105 | 1/BA/1004:1011, 1/BA/1150:1151 | SSU/LSU pseudoknot Not in a motif group | homologous IL_5J7L_278 IL_15861.7 | |
| IL_4V7P_106 | 1/BA/1011:1013, 1/BA/1149:1150 | Single bulged U Not in a motif group | geometric IL_5J7L_279 IL_83039.13 | |
| IL_4V7P_107 | 1/BA/1018:1024, 1/BA/1140:1144 | No text annotation Not in a motif group | ||
| IL_4V7P_108 | 1/BA/1024:1030, 1/BA/1124:1140 | No text annotation Not in a motif group | geometric IL_7RQB_040 IL_50715.1 | |
| IL_4V7P_109 | 1/BA/1031:1034, 1/BA/1121:1123 | Isolated non-canonical cWW with bulges Not in a motif group | homologous IL_5J7L_282 IL_82068.2 | |
| IL_4V7P_110 | 1/BA/1043:1051, 1/BA/1108:1112 | Kink-turn Not in a motif group | homologous IL_5J7L_284 IL_90538.4 | |
| IL_4V7P_113 | 1/BA/1196:1198, 1/BA/1247:1250 | Isolated cWS basepair Not in a motif group | homologous IL_4WF9_044 IL_52767.2 | |
| IL_4V7P_114 | 1/BA/1202:1206, 1/BA/1240:1243 | No text annotation Not in a motif group | homologous IL_7RQB_046 IL_68574.2 | |
| IL_4V7P_115 | 1/BA/1208:1215, 1/BA/1234:1238 | Kink-turn Not in a motif group | homologous IL_7RQB_047 IL_70923.2 | |
| IL_4V7P_116 | 1/BA/1219:1221, 1/BA/1229:1230 | Single bulged A Not in a motif group | homologous IL_7RQB_048 IL_37497.2 | |
| IL_4V7P_117 | 1/BA/1221:1222, 1/BA/1227:1229 | Not an internal loop Not in a motif group | geometric IL_5VCI_005 IL_82842.2 | |
| IL_4V7P_118 | 1/BA/1262:1269, 1/BA/2011:2017 | 8x7 Sarcin-Ricin; G-bulge Not in a motif group | homologous IL_7RQB_049 IL_04346.7 | |
| IL_4V7P_119 | 1/BA/1310:1313, 1/BA/1603:1604 | Major groove platform; stack outside cWW Not in a motif group | homologous IL_4WF9_049 IL_50694.2 | |
| IL_4V7P_120 | 1/BA/1319:1323, 1/BA/1331:1333 | C-loop Not in a motif group | homologous IL_7RQB_051 IL_63596.6 | |
| IL_4V7P_121 | 1/BA/1351:1355, 1/BA/1376:1380 | UAA/GAN Not in a motif group | homologous IL_7RQB_052 IL_89002.2 | |
| IL_4V7P_122 | 1/BA/1357:1361, 1/BA/1370:1374 | tSH-tHW-tHS Not in a motif group | homologous IL_7RQB_053 IL_17136.1 | |
| IL_4V7P_123 | 1/BA/1415:1416, 1/BA/1582:1587 | No text annotation Not in a motif group | homologous IL_7RQB_054 IL_67474.4 | |
| IL_4V7P_124 | 1/BA/1417:1421, 1/BA/1577:1581 | UAA/GAN Not in a motif group | homologous IL_5J7L_295 IL_89002.2 | |
| IL_4V7P_125 | 1/BA/1433:1435, 1/BA/1557:1560 | Isolated tWW turn Not in a motif group | homologous IL_7RQB_056 IL_54997.7 | |
| IL_4V7P_126 | 1/BA/1437:1440, 1/BA/1551:1555 | tSH-tHW Not in a motif group | homologous IL_7RQB_057 IL_04059.1 | |
| IL_4V7P_127 | 1/BA/1469:1473, 1/BA/1520:1523 | UAA/GAN Not in a motif group | homologous IL_7RQB_060 IL_07235.1 | |
| IL_4V7P_128 | 1/BA/1481:1483, 1/BA/1506:1512 | No text annotation Not in a motif group | homologous IL_7RQB_061 IL_52493.1 | |
| IL_4V7P_129 | 1/BA/1489:1491, 1/BA/1499:1500 | Single bulged A Not in a motif group | homologous IL_7RQB_062 IL_37497.2 | |
| IL_4V7P_130 | 1/BA/1651:1656, 1/BA/2004:2006 | No text annotation Not in a motif group | homologous IL_5J7L_304 IL_12566.2 | |
| IL_4V7P_131 | 1/BA/1663:1665, 1/BA/1995:1997 | Isolated tWW turn Not in a motif group | homologous IL_7RQB_065 IL_54997.7 | |
| IL_4V7P_132 | 1/BA/1666:1669, 1/BA/1993:1994 | Major groove platform; stack outside cWW Not in a motif group | homologous IL_7RQB_066 IL_50694.2 | |
| IL_4V7P_133 | 1/BA/1669:1674, 1/BA/1990:1993 | Intercalated tWH Not in a motif group | geometric IL_7A0S_062 IL_82842.2 | |
| IL_4V7P_134 | 1/BA/1686:1691, 1/BA/1696:1702 | tSH-tSH-tHH-tHS Not in a motif group | homologous IL_7RQB_068 IL_65969.2 | |
| IL_4V7P_135 | 1/BA/1770:1771, 1/BA/1980:1982 | Single bulged A Not in a motif group | homologous IL_7RQB_069 IL_37497.2 | |
| IL_4V7P_136 | 1/BA/1798:1804, 1/BA/1813:1821 | Kink-turn related Not in a motif group | homologous IL_7RQB_070 IL_17069.3 | |
| IL_4V7P_137 | 1/BA/1837:1840, 1/BA/1902:1903 | Major groove outside cWW, minor groove, intercalation pocket Not in a motif group | homologous IL_7A0S_066 IL_88739.1 | |
| IL_4V7P_138 | 1/BA/1841:1842, 1/BA/1898:1901 | Major groove outside cWW, minor groove, intercalation pocket Not in a motif group | homologous IL_5J7L_315 IL_16396.2 | |
| IL_4V7P_139 | 1/BA/1846:1849, 1/BA/1893:1894 | Minor groove platform Not in a motif group | homologous IL_7RQB_073 IL_88739.1 | |
| IL_4V7P_140 | 1/BA/1851:1855, 1/BA/1887:1891 | UAA/GAN with extra pair Not in a motif group | homologous IL_7RQB_074 IL_90318.1 | |
| IL_4V7P_141 | 1/BA/1856:1860, 1/BA/1882:1886 | Triple sheared Not in a motif group | homologous IL_7RQB_075 IL_56467.8 | |
| IL_4V7P_142 | 1/BA/1933:1934, 1/BA/1964:1967 | Multiple bulged bases Not in a motif group | geometric IL_5J7L_318 IL_59677.2 | |
| IL_4V7P_143 | 1/BA/1934:1945, 1/BA/1961:1964 | No text annotation Not in a motif group | homologous IL_4WF9_077 IL_81589.2 | |
| IL_4V7P_144 | 1/BA/2050:2052, 1/BA/2617:2618 | Major groove platform Not in a motif group | homologous IL_7RQB_078 IL_27635.1 | |
| IL_4V7P_145 | 1/BA/2054:2057, 1/BA/2611:2615 | No text annotation Not in a motif group | ||
| IL_4V7P_146 | 1/BA/2067:2069, 1/BA/2442:2443 | Single bulged U Not in a motif group | homologous IL_7RQB_080 IL_83039.13 | |
| IL_4V7P_147 | 1/BA/2070:2071, 1/BA/2438:2441 | Minor groove platform Not in a motif group | homologous IL_7RQB_081 IL_42622.2 | |
| IL_4V7P_148 | 1/BA/2081:2083, 1/BA/2236:2239 | Isolated tHS basepair with bulges Not in a motif group | homologous IL_7RQB_082 IL_38958.7 | |
| IL_4V7P_149 | 1/BA/2085:2087, 1/BA/2232:2234 | No text annotation Not in a motif group | homologous IL_7RQB_083 IL_95997.1 | |
| IL_4V7P_150 | 1/BA/2101:2103, 1/BA/2186:2188 | No text annotation Not in a motif group | geometric IL_7A0S_026 IL_51629.2 | |
| IL_4V7P_155 | 1/BA/2297:2299, 1/BA/2317:2321 | Isolated tHS basepair with bulges Not in a motif group | geometric IL_7RQB_088 IL_38958.7 | |
| IL_4V7P_156 | 1/BA/2350:2353, 1/BA/2364:2367 | Double sheared Not in a motif group | homologous IL_7RQB_089 IL_09705.9 | |
| IL_4V7P_157 | 1/BA/2401:2403, 1/BA/2414:2415 | Single bulged U Not in a motif group | homologous IL_4WF9_088 IL_83039.13 | |
| IL_4V7P_158 | 1/BA/2453:2454, 1/BA/2498:2500 | Single stack bend Not in a motif group | homologous IL_7RQB_091 IL_76488.2 | |
| IL_4V7P_159 | 1/BA/2454:2455, 1/BA/2496:2498 | Major groove platform Not in a motif group | geometric IL_4V9F_082 IL_27635.1 | |
| IL_4V7P_160 | 1/BA/2457:2459, 1/BA/2493:2494 | Major groove platform Not in a motif group | geometric IL_4WF9_091 IL_27635.1 | |
| IL_4V7P_161 | 1/BA/2459:2461, 1/BA/2489:2493 | Major groove minor groove platform with extra cWW Not in a motif group | homologous IL_7A0S_086 IL_92788.2 | |
| IL_4V7P_162 | 1/BA/2466:2470, 1/BA/2480:2484 | Triple sheared Not in a motif group | homologous IL_7A0S_087 IL_56467.8 | |
| IL_4V7P_163 | 1/BA/2507:2508, 1/BA/2580:2582 | Major groove platform Not in a motif group | homologous IL_7RQB_096 IL_76223.2 | |
| IL_4V7P_164 | 1/BA/2510:2512, 1/BA/2574:2578 | Isolated non-canonical cWW with bulges Not in a motif group | geometric IL_7RQB_097 IL_90933.2 | |
| IL_4V7P_165 | 1/BA/2512:2513, 1/BA/2571:2574 | No text annotation Not in a motif group | homologous IL_5J7L_341 IL_71530.2 | |
| IL_4V7P_166 | 1/BA/2522:2523, 1/BA/2540:2543 | Minor groove platform with intercalation Not in a motif group | homologous IL_7RQB_099 IL_95601.3 | |
| IL_4V7P_168 | 1/BA/2591:2592, 1/BA/2601:2603 | Single bulged A Not in a motif group | homologous IL_7RQB_101 IL_37497.2 | |
| IL_4V7P_169 | 1/BA/2636:2640, 1/BA/2774:2782 | tSH-tHS-tHW Not in a motif group | homologous IL_7RQB_102 IL_04638.1 | |
| IL_4V7P_170 | 1/BA/2652:2658, 1/BA/2663:2668 | Sarcin-Ricin target in LSU H95; G-bulge Not in a motif group | homologous IL_7RQB_103 IL_16458.1 | |
| IL_4V7P_171 | 1/BA/2680:2684, 1/BA/2725:2727 | C-loop Not in a motif group | homologous IL_7RQB_104 IL_63596.6 | |
| IL_4V7P_172 | 1/BA/2687:2691, 1/BA/2718:2722 | No text annotation Not in a motif group | homologous IL_7RQB_105 IL_08296.3 | |
| IL_4V7P_173 | 1/BA/2695:2696, 1/BA/2711:2714 | Multiple bulged bases Not in a motif group | geometric IL_5TBW_109 IL_71530.2 | |
| IL_4V7P_174 | 1/BA/2737:2742, 1/BA/2762:2767 | UAA/GAN with extra cWW Not in a motif group | homologous IL_7RQB_107 IL_49767.5 | |
| IL_4V7P_175 | 1/BA/2838:2839, 1/BA/2878:2880 | Single bulged C Not in a motif group | homologous IL_7RQB_108 IL_61258.12 | |
| IL_4V7P_176 | 1/BA/2843:2846, 1/BA/2870:2874 | No text annotation Not in a motif group | homologous IL_7RQB_109 IL_58764.3 | |
| IL_4V7P_177 | 1/BA/2847:2852, 1/BA/2865:2869 | No text annotation Not in a motif group | homologous IL_7RQB_110 IL_83162.5 | |
| IL_4V7P_178 | 1/BB/17:18, 1/BB/65:67 | Major groove intercalation Not in a motif group | homologous IL_4V9F_101 IL_37497.2 | |
| IL_4V7P_179 | 1/BB/23:28, 1/BB/56:60 | No text annotation Not in a motif group | homologous IL_5J7L_356 IL_18472.2 | |
| IL_4V7P_180 | 1/BB/30:31, 1/BB/51:54 | No text annotation Not in a motif group | ||
| IL_4V7P_181 | 1/BB/34:38, 1/BB/44:48 | Symmetric double minor groove platform Not in a motif group | homologous IL_5TBW_376 IL_58103.6 | |
| IL_4V7P_182 | 1/BB/71:79, 1/BB/97:105 | Bacterial 5S Loop E Not in a motif group | homologous IL_7RQB_115 IL_56455.3 | |
| IL_4V7P_183 | 1/BB/80:82, 1/BB/94:96 | No text annotation Not in a motif group | geometric IL_7A0S_107 IL_51629.2 | |
| IL_4V7P_184 | 1/CA/24:30, 1/CA/510:516 | Triple sheared with non-canonical cWW Not in a motif group | homologous IL_7RQB_001 IL_66414.6 | |
| IL_4V7P_185 | 1/CA/36:37, 1/CA/442:444 | Single bulged A Not in a motif group | homologous IL_7A0S_002 IL_37497.2 | |
| IL_4V7P_186 | 1/CA/43:45, 1/CA/433:436 | Major groove platform with extra cWW Not in a motif group | geometric IL_4V9F_003 IL_18471.2 | |
| IL_4V7P_187 | 1/CA/55:56, 1/CA/114:115 | No text annotation Not in a motif group | ||
| IL_4V7P_188 | 1/CA/81:85, 1/CA/97:105 | Kink-turn Not in a motif group | homologous IL_7RQB_004 IL_45067.2 | |
| IL_4V7P_189 | 1/CA/122:123, 1/CA/128:129 | No text annotation Not in a motif group | ||
| IL_4V7P_190 | 1/CA/134:135, 1/CA/144:145 | No text annotation Not in a motif group | ||
| IL_4V7P_191 | 1/CA/154:155, 1/CA/171:172 | No text annotation Not in a motif group | homologous HL_7RQB_005 NA | |
| IL_4V7P_192 | 1/CA/183:184, 1/CA/212:214 | Single stack bend Not in a motif group | homologous IL_7RQB_005 IL_76488.2 | |
| IL_4V7P_193 | 1/CA/188:194, 1/CA/201:208 | 8x7 Sarcin-Ricin; G-bulge Not in a motif group | homologous IL_7RQB_006 IL_04346.7 | |
| IL_4V7P_194 | 1/CA/239:245, 1/CA/253:258 | 7x6 Sarcin-Ricin; G-bulge Not in a motif group | homologous IL_7RQB_007 IL_76042.2 | |
| IL_4V7P_195 | 1/CA/270K:270L, 1/CA/270O:270Q | No text annotation Not in a motif group | ||
| IL_4V7P_197 | 1/CA/273A:273B, 1/CA/363F:364 | Major groove platform Not in a motif group | homologous IL_7RQB_009 IL_27635.1 | |
| IL_4V7P_198 | 1/CA/273G:279, 1/CA/361:363A | No text annotation Not in a motif group | ||
| IL_4V7P_199 | 1/CA/280:284, 1/CA/357:360 | tSH-tHW Not in a motif group | homologous IL_7RQB_011 IL_04059.1 | |
| IL_4V7P_200 | 1/CA/288:290, 1/CA/350:353 | Isolated tHS basepair with bulges Not in a motif group | homologous IL_7RQB_012 IL_38958.7 | |
| IL_4V7P_201 | 1/CA/293:295, 1/CA/343:347 | No text annotation Not in a motif group | homologous IL_7RQB_013 IL_69440.1 | |
| IL_4V7P_202 | 1/CA/481:484, 1/CA/496:509 | No text annotation Not in a motif group | homologous IL_7RQB_014 IL_60992.6 | |
| IL_4V7P_203 | 1/CA/564:566, 1/CA/575:577 | No text annotation Not in a motif group | geometric IL_4WF9_017 IL_95997.1 | |
| IL_4V7P_204 | 1/CA/606:609B, 1/CA/618B:622 | AAA cross-strand stack Not in a motif group | homologous IL_7RQB_016 IL_17136.1 | |
| IL_4V7P_205 | 1/CA/672:674, 1/CA/806:808 | No text annotation Not in a motif group | geometric IL_7RQB_017 IL_95997.1 | |
| IL_4V7P_206 | 1/CA/674:678, 1/CA/799:806 | tHW-tHW cross-strand stack Not in a motif group | homologous IL_4WF9_021 IL_17470.6 | |
| IL_4V7P_207 | 1/CA/697:698, 1/CA/763:765 | Single bulged A Not in a motif group | geometric IL_7RQB_019 IL_37497.2 | |
| IL_4V7P_208 | 1/CA/702:703, 1/CA/728:730 | Single bulged G Not in a motif group | homologous IL_7A0S_017 IL_00225.2 | |
| IL_4V7P_209 | 1/CA/703:707, 1/CA/724:728 | Triple sheared Not in a motif group | geometric IL_7RQB_021 IL_56467.8 | |
| IL_4V7P_210 | 1/CA/738:741, 1/CA/756:758 | Major groove platform with extra cWW Not in a motif group | homologous IL_7RQB_022 IL_05564.2 | |
| IL_4V7P_211 | 1/CA/775:777, 1/CA/787:791 | Multiple bulged bases Not in a motif group | homologous IL_4WF9_027 IL_90991.6 | |
| IL_4V7P_212 | 1/CA/837:838, 1/CA/940:942 | Single stack bend Not in a motif group | homologous IL_5J7L_266 IL_92001.1 | |
| IL_4V7P_213 | 1/CA/844:846, 1/CA/931:934 | Intercalated cWW Not in a motif group | homologous IL_7RQB_025 IL_52767.2 | |
| IL_4V7P_214 | 1/CA/846:850, 1/CA/928:931 | No text annotation Not in a motif group | geometric IL_7RQB_026 IL_94165.1 | |
| IL_4V7P_215 | 1/CA/858:862, 1/CA/915:919 | 5x5 Sarcin-Ricin with intercalated A; G-bulge Not in a motif group | homologous IL_7RQB_027 IL_38862.1 | |
| IL_4V7P_216 | 1/CA/862:863, 1/CA/913:915 | Minor groove platform Not in a motif group | geometric IL_4V9F_034 IL_42622.2 | |
| IL_4V7P_217 | 1/CA/864:868, 1/CA/909:912 | C-loop Not in a motif group | homologous IL_7RQB_029 IL_02509.1 | |
| IL_4V7P_218 | 1/CA/870:872, 1/CA/905:907 | Isolated cWS basepair Not in a motif group | homologous IL_7RQB_030 IL_52767.2 | |
| IL_4V7P_219 | 1/CA/875:877, 1/CA/899:902 | Minor groove platform with extra cWW Not in a motif group | homologous IL_7RQB_031 IL_46796.1 | |
| IL_4V7P_220 | 1/CA/877:879, 1/CA/898:899 | Not an internal loop Not in a motif group | geometric IL_4LFB_053 IL_93353.1 | |
| IL_4V7P_221 | 1/CA/880:881, 1/CA/895:897 | Single bulged A Not in a motif group | homologous IL_7RQB_033 IL_37497.2 | |
| IL_4V7P_222 | 1/CA/952:954, 1/CA/963:965 | No text annotation Not in a motif group | homologous IL_7RQB_034 IL_95997.1 | |
| IL_4V7P_223 | 1/CA/994:996, 1/CA/1159:1160 | Single bulged C Not in a motif group | homologous IL_7RQB_035 IL_61258.12 | |
| IL_4V7P_224 | 1/CA/998:1002, 1/CA/1153:1157 | UAA/GAN Not in a motif group | homologous IL_7RQB_036 IL_89002.2 | |
| IL_4V7P_225 | 1/CA/1004:1011, 1/CA/1150:1151 | SSU/LSU pseudoknot Not in a motif group | homologous IL_5J7L_278 IL_15861.7 | |
| IL_4V7P_226 | 1/CA/1011:1013, 1/CA/1149:1150 | Single bulged U Not in a motif group | geometric IL_5J7L_279 IL_83039.13 | |
| IL_4V7P_227 | 1/CA/1018:1024, 1/CA/1140:1144 | No text annotation Not in a motif group | ||
| IL_4V7P_228 | 1/CA/1024:1030, 1/CA/1124:1140 | No text annotation Not in a motif group | geometric IL_7RQB_040 IL_50715.1 | |
| IL_4V7P_229 | 1/CA/1031:1034, 1/CA/1121:1123 | Isolated non-canonical cWW with bulges Not in a motif group | homologous IL_5J7L_282 IL_82068.2 | |
| IL_4V7P_230 | 1/CA/1043:1051, 1/CA/1108:1112 | Kink-turn Not in a motif group | homologous IL_5J7L_284 IL_90538.4 | |
| IL_4V7P_231 | 1/CA/1059:1062, 1/CA/1076:1079 | No text annotation Not in a motif group | homologous IL_5J7L_285 IL_23544.2 | |
| IL_4V7P_232 | 1/CA/1087:1091, 1/CA/1100:1102 | Major groove platform with extra cWW Not in a motif group | geometric IL_1MMS_002 IL_05564.2 | |
| IL_4V7P_233 | 1/CA/1196:1198, 1/CA/1247:1250 | Isolated cWS basepair Not in a motif group | homologous IL_4WF9_044 IL_52767.2 | |
| IL_4V7P_234 | 1/CA/1202:1206, 1/CA/1240:1243 | No text annotation Not in a motif group | homologous IL_7RQB_046 IL_68574.2 | |
| IL_4V7P_235 | 1/CA/1208:1215, 1/CA/1234:1238 | Kink-turn Not in a motif group | homologous IL_7RQB_047 IL_70923.2 | |
| IL_4V7P_236 | 1/CA/1219:1221, 1/CA/1229:1230 | Single bulged A Not in a motif group | geometric IL_7RQB_048 IL_37497.2 | |
| IL_4V7P_237 | 1/CA/1221:1222, 1/CA/1227:1229 | Not an internal loop Not in a motif group | geometric IL_5VCI_005 IL_82842.2 | |
| IL_4V7P_238 | 1/CA/1262:1269, 1/CA/2011:2017 | 8x7 Sarcin-Ricin; G-bulge Not in a motif group | homologous IL_7RQB_049 IL_04346.7 | |
| IL_4V7P_239 | 1/CA/1310:1313, 1/CA/1603:1604 | Major groove platform; stack outside cWW Not in a motif group | homologous IL_4WF9_049 IL_50694.2 | |
| IL_4V7P_240 | 1/CA/1319:1323, 1/CA/1331:1333 | C-loop Not in a motif group | homologous IL_7RQB_051 IL_63596.6 | |
| IL_4V7P_241 | 1/CA/1351:1355, 1/CA/1376:1380 | UAA/GAN Not in a motif group | homologous IL_7RQB_052 IL_89002.2 | |
| IL_4V7P_242 | 1/CA/1357:1361, 1/CA/1370:1374 | tSH-tHW-tHS Not in a motif group | homologous IL_7RQB_053 IL_17136.1 | |
| IL_4V7P_243 | 1/CA/1415:1416, 1/CA/1582:1587 | No text annotation Not in a motif group | homologous IL_7RQB_054 IL_67474.4 | |
| IL_4V7P_244 | 1/CA/1417:1421, 1/CA/1577:1581 | UAA/GAN Not in a motif group | homologous IL_5J7L_295 IL_89002.2 | |
| IL_4V7P_245 | 1/CA/1433:1435, 1/CA/1557:1560 | Isolated tWW turn Not in a motif group | homologous IL_7RQB_056 IL_54997.7 | |
| IL_4V7P_246 | 1/CA/1437:1440, 1/CA/1551:1555 | tSH-tHW Not in a motif group | homologous IL_7RQB_057 IL_04059.1 | |
| IL_4V7P_247 | 1/CA/1469:1473, 1/CA/1520:1523 | UAA/GAN Not in a motif group | homologous IL_7RQB_060 IL_07235.1 | |
| IL_4V7P_248 | 1/CA/1481:1483, 1/CA/1506:1512 | No text annotation Not in a motif group | homologous IL_7RQB_061 IL_52493.1 | |
| IL_4V7P_249 | 1/CA/1489:1491, 1/CA/1499:1500 | Single bulged A Not in a motif group | homologous IL_7RQB_062 IL_37497.2 | |
| IL_4V7P_250 | 1/CA/1651:1656, 1/CA/2004:2006 | No text annotation Not in a motif group | homologous IL_5J7L_304 IL_12566.2 | |
| IL_4V7P_251 | 1/CA/1663:1665, 1/CA/1995:1997 | Isolated tWW turn Not in a motif group | homologous IL_7RQB_065 IL_54997.7 | |
| IL_4V7P_252 | 1/CA/1666:1669, 1/CA/1993:1994 | Major groove platform; stack outside cWW Not in a motif group | geometric IL_4V9F_061 IL_50694.2 | |
| IL_4V7P_253 | 1/CA/1669:1674, 1/CA/1990:1993 | Intercalated tWH Not in a motif group | homologous IL_7A0S_062 IL_82842.2 | |
| IL_4V7P_254 | 1/CA/1686:1691, 1/CA/1696:1702 | tSH-tSH-tHH-tHS Not in a motif group | geometric IL_7RQB_068 IL_65969.2 | |
| IL_4V7P_255 | 1/CA/1770:1771, 1/CA/1980:1982 | Single bulged A Not in a motif group | homologous IL_7RQB_069 IL_37497.2 | |
| IL_4V7P_256 | 1/CA/1798:1804, 1/CA/1813:1821 | Kink-turn related Not in a motif group | homologous IL_7RQB_070 IL_17069.3 | |
| IL_4V7P_257 | 1/CA/1837:1840, 1/CA/1902:1903 | Major groove outside cWW, minor groove, intercalation pocket Not in a motif group | homologous IL_7A0S_066 IL_88739.1 | |
| IL_4V7P_258 | 1/CA/1841:1842, 1/CA/1898:1901 | Major groove outside cWW, minor groove, intercalation pocket Not in a motif group | homologous IL_5J7L_315 IL_16396.2 | |
| IL_4V7P_259 | 1/CA/1846:1849, 1/CA/1893:1894 | Minor groove platform Not in a motif group | homologous IL_7RQB_073 IL_88739.1 | |
| IL_4V7P_260 | 1/CA/1851:1855, 1/CA/1887:1891 | UAA/GAN with extra pair Not in a motif group | homologous IL_7RQB_074 IL_90318.1 | |
| IL_4V7P_261 | 1/CA/1856:1860, 1/CA/1882:1886 | Triple sheared Not in a motif group | homologous IL_7RQB_075 IL_56467.8 | |
| IL_4V7P_262 | 1/CA/1933:1934, 1/CA/1964:1967 | Multiple bulged bases Not in a motif group | homologous IL_5J7L_318 IL_59677.2 | |
| IL_4V7P_263 | 1/CA/1934:1945, 1/CA/1961:1964 | No text annotation Not in a motif group | geometric IL_4WF9_077 IL_81589.2 | |
| IL_4V7P_264 | 1/CA/2050:2052, 1/CA/2617:2618 | Major groove platform Not in a motif group | homologous IL_7RQB_078 IL_27635.1 | |
| IL_4V7P_265 | 1/CA/2054:2057, 1/CA/2611:2615 | No text annotation Not in a motif group | ||
| IL_4V7P_266 | 1/CA/2067:2069, 1/CA/2442:2443 | Single bulged U Not in a motif group | homologous IL_7RQB_080 IL_83039.13 | |
| IL_4V7P_267 | 1/CA/2070:2071, 1/CA/2438:2441 | Minor groove platform Not in a motif group | homologous IL_7RQB_081 IL_42622.2 | |
| IL_4V7P_268 | 1/CA/2081:2083, 1/CA/2236:2239 | Isolated tHS basepair with bulges Not in a motif group | homologous IL_7RQB_082 IL_38958.7 | |
| IL_4V7P_269 | 1/CA/2085:2087, 1/CA/2232:2234 | No text annotation Not in a motif group | homologous IL_7RQB_083 IL_95997.1 | |
| IL_4V7P_270 | 1/CA/2101:2103, 1/CA/2186:2188 | No text annotation Not in a motif group | geometric IL_7A0S_026 IL_51629.2 | |
| IL_4V7P_274 | 1/CA/2129:2136, 1/CA/2155:2159 | Kink-turn Not in a motif group | homologous IL_5J7L_330 IL_70923.2 | |
| IL_4V7P_275 | 1/CA/2297:2299, 1/CA/2317:2321 | Isolated tHS basepair with bulges Not in a motif group | geometric IL_7RQB_088 IL_38958.7 | |
| IL_4V7P_276 | 1/CA/2350:2353, 1/CA/2364:2367 | Double sheared Not in a motif group | homologous IL_7RQB_089 IL_09705.9 | |
| IL_4V7P_277 | 1/CA/2401:2403, 1/CA/2414:2415 | Single bulged U Not in a motif group | homologous IL_4WF9_088 IL_83039.13 | |
| IL_4V7P_278 | 1/CA/2453:2454, 1/CA/2498:2500 | Single stack bend Not in a motif group | homologous IL_7RQB_091 IL_76488.2 | |
| IL_4V7P_279 | 1/CA/2454:2455, 1/CA/2496:2498 | Major groove platform Not in a motif group | geometric IL_4V9F_082 IL_27635.1 | |
| IL_4V7P_280 | 1/CA/2457:2459, 1/CA/2493:2494 | Major groove platform Not in a motif group | homologous IL_4WF9_091 IL_27635.1 | |
| IL_4V7P_281 | 1/CA/2459:2461, 1/CA/2489:2493 | Major groove minor groove platform with extra cWW Not in a motif group | geometric IL_4WF9_092 IL_92788.2 | |
| IL_4V7P_282 | 1/CA/2466:2470, 1/CA/2480:2484 | Triple sheared Not in a motif group | homologous IL_7A0S_087 IL_56467.8 | |
| IL_4V7P_283 | 1/CA/2507:2508, 1/CA/2580:2582 | Major groove platform Not in a motif group | homologous IL_7RQB_096 IL_76223.2 | |
| IL_4V7P_284 | 1/CA/2510:2512, 1/CA/2574:2578 | Isolated non-canonical cWW with bulges Not in a motif group | homologous IL_7RQB_097 IL_90933.2 | |
| IL_4V7P_285 | 1/CA/2512:2513, 1/CA/2571:2574 | No text annotation Not in a motif group | geometric IL_5J7L_341 IL_71530.2 | |
| IL_4V7P_286 | 1/CA/2522:2523, 1/CA/2540:2543 | Minor groove platform with intercalation Not in a motif group | homologous IL_7RQB_099 IL_95601.3 | |
| IL_4V7P_288 | 1/CA/2591:2592, 1/CA/2601:2603 | Single bulged A Not in a motif group | homologous IL_7RQB_101 IL_37497.2 | |
| IL_4V7P_289 | 1/CA/2636:2640, 1/CA/2774:2782 | tSH-tHS-tHW Not in a motif group | homologous IL_7RQB_102 IL_04638.1 | |
| IL_4V7P_290 | 1/CA/2652:2658, 1/CA/2663:2668 | Sarcin-Ricin target in LSU H95; G-bulge Not in a motif group | homologous IL_7RQB_103 IL_16458.1 | |
| IL_4V7P_291 | 1/CA/2680:2684, 1/CA/2725:2727 | C-loop Not in a motif group | homologous IL_7RQB_104 IL_63596.6 | |
| IL_4V7P_292 | 1/CA/2687:2691, 1/CA/2718:2722 | No text annotation Not in a motif group | homologous IL_7RQB_105 IL_08296.3 | |
| IL_4V7P_293 | 1/CA/2695:2696, 1/CA/2711:2714 | Multiple bulged bases Not in a motif group | geometric IL_5TBW_109 IL_71530.2 | |
| IL_4V7P_294 | 1/CA/2737:2742, 1/CA/2762:2767 | UAA/GAN with extra cWW Not in a motif group | homologous IL_7RQB_107 IL_49767.5 | |
| IL_4V7P_295 | 1/CA/2838:2839, 1/CA/2878:2880 | Single bulged C Not in a motif group | homologous IL_7RQB_108 IL_61258.12 | |
| IL_4V7P_296 | 1/CA/2843:2846, 1/CA/2870:2874 | No text annotation Not in a motif group | homologous IL_7RQB_109 IL_58764.3 | |
| IL_4V7P_297 | 1/CA/2847:2852, 1/CA/2865:2869 | No text annotation Not in a motif group | homologous IL_7RQB_110 IL_83162.5 | |
| IL_4V7P_298 | 1/CB/17:18, 1/CB/65:67 | Major groove intercalation Not in a motif group | homologous IL_4V9F_101 IL_37497.2 | |
| IL_4V7P_299 | 1/CB/23:28, 1/CB/56:60 | No text annotation Not in a motif group | homologous IL_5J7L_356 IL_18472.2 | |
| IL_4V7P_300 | 1/CB/30:31, 1/CB/51:54 | No text annotation Not in a motif group | ||
| IL_4V7P_301 | 1/CB/34:38, 1/CB/44:48 | Symmetric double minor groove platform Not in a motif group | homologous IL_5TBW_376 IL_58103.6 | |
| IL_4V7P_302 | 1/CB/71:79, 1/CB/97:105 | Bacterial 5S Loop E Not in a motif group | homologous IL_7RQB_115 IL_56455.3 | |
| IL_4V7P_303 | 1/CB/80:82, 1/CB/94:96 | No text annotation Not in a motif group | geometric IL_7A0S_107 IL_51629.2 | |
| IL_4V7P_304 | 1/DA/30:32, 1/DA/552:553 | Single bulged G Not in a motif group | homologous IL_4LFB_001 IL_00225.2 | |
| IL_4V7P_305 | 1/DA/44:45, 1/DA/396:398 | Single bulged A Not in a motif group | homologous IL_4LFB_002 IL_37497.2 | |
| IL_4V7P_306 | 1/DA/47:52, 1/DA/359:361 | No text annotation Not in a motif group | homologous IL_4LFB_003 IL_11178.1 | |
| IL_4V7P_307 | 1/DA/54:56, 1/DA/356:357 | Minor groove platform Not in a motif group | homologous IL_4LFB_004 IL_93353.1 | |
| IL_4V7P_308 | 1/DA/67:69, 1/DA/99:102 | No text annotation Not in a motif group | homologous IL_4LFB_006 IL_95997.1 | |
| IL_4V7P_309 | 1/DA/75:77, 1/DA/92:95 | Isolated cWH basepair Not in a motif group | geometric IL_4J50_001 IL_51629.2 | |
| IL_4V7P_310 | 1/DA/79:81, 1/DA/88:90 | No text annotation Not in a motif group | geometric IL_5TBW_016 IL_51629.2 | |
| IL_4V7P_311 | 1/DA/129A:131, 1/DA/231:232 | Multiple bulged bases Not in a motif group | homologous IL_4LFB_007 IL_16396.2 | |
| IL_4V7P_312 | 1/DA/132:136, 1/DA/227:230 | No text annotation Not in a motif group | homologous IL_4LFB_008 IL_58764.3 | |
| IL_4V7P_314 | 1/DA/148:153, 1/DA/168:174 | tWH-tWH-tHW-tHW Not in a motif group | homologous IL_4LFB_009 IL_39753.1 | |
| IL_4V7P_315 | 1/DA/186A:186C, 1/DA/191E:191G | No text annotation Not in a motif group | homologous IL_4LFB_010 IL_95997.1 | |
| IL_4V7P_316 | 1/DA/242:247, 1/DA/277:284 | Kink-turn with non-sequential stacking Not in a motif group | homologous IL_4LFB_011 IL_45067.2 | |
| IL_4V7P_317 | 1/DA/249:252, 1/DA/274:275 | No text annotation Not in a motif group | homologous IL_4LFB_012 IL_48100.2 | |
| IL_4V7P_318 | 1/DA/292:293, 1/DA/304:308 | C-loop Not in a motif group | homologous IL_4LFB_013 IL_37712.2 | |
| IL_4V7P_319 | 1/DA/367:369, 1/DA/392:393 | Single bulged U Not in a motif group | homologous IL_4LFB_014 IL_83039.13 | |
| IL_4V7P_320 | 1/DA/371:375, 1/DA/389:390 | C-loop Not in a motif group | geometric IL_5J7L_018 IL_75255.1 | |
| IL_4V7P_322 | 1/DA/409:416, 1/DA/427:433 | No text annotation Not in a motif group | homologous IL_4LFB_017 IL_28026.1 | |
| IL_4V7P_323 | 1/DA/446:450, 1/DA/483:488 | 6x5 Sarcin-Ricin; G-bulge Not in a motif group | homologous IL_6CZR_130 IL_88269.3 | |
| IL_4V7P_324 | 1/DA/450:455, 1/DA/477:483 | No text annotation Not in a motif group | geometric IL_4LFB_019 IL_11882.1 | |
| IL_4V7P_325 | 1/DA/504:511, 1/DA/540:541 | SSU/LSU pseudoknot Not in a motif group | homologous IL_4LFB_020 IL_15861.7 | |
| IL_4V7P_326 | 1/DA/515:521, 1/DA/528:536 | No text annotation Not in a motif group | geometric IL_4V88_415 IL_55871.1 | |
| IL_4V7P_327 | 1/DA/569:575, 1/DA/880:881 | No text annotation Not in a motif group | homologous IL_4LFB_022 IL_69996.1 | |
| IL_4V7P_328 | 1/DA/580:584, 1/DA/757:761 | tSH-tHW-tHS Not in a motif group | homologous IL_4LFB_023 IL_17136.1 | |
| IL_4V7P_329 | 1/DA/594:596, 1/DA/644:645 | Major groove platform Not in a motif group | homologous IL_4LFB_024 IL_27635.1 | |
| IL_4V7P_330 | 1/DA/597:598, 1/DA/640:643 | Major groove minor groove platform; mini C-loop Not in a motif group | homologous IL_5J7L_029 IL_09061.6 | |
| IL_4V7P_331 | 1/DA/605:612, 1/DA/628:633 | No text annotation Not in a motif group | homologous IL_4LFB_026 IL_78349.1 | |
| IL_4V7P_332 | 1/DA/654:655, 1/DA/751:754 | Major groove platform; stack outside cWW Not in a motif group | homologous IL_4LFB_027 IL_50694.2 | |
| IL_4V7P_333 | 1/DA/657:658, 1/DA/747:749 | Major groove platform Not in a motif group | homologous IL_4LFB_028 IL_27635.1 | |
| IL_4V7P_334 | 1/DA/662:666, 1/DA/740:743 | Tandem non-canonical cWW pairs Not in a motif group | homologous IL_5J7L_033 IL_71110.1 | |
| IL_4V7P_335 | 1/DA/673:678, 1/DA/712:717 | No text annotation Not in a motif group | homologous IL_5J7L_034 IL_04668.1 | |
| IL_4V7P_336 | 1/DA/683:688, 1/DA/699:707 | Kink-turn Not in a motif group | homologous IL_4LFB_031 IL_37722.1 | |
| IL_4V7P_337 | 1/DA/774:778, 1/DA/804:805 | Left turn Not in a motif group | homologous IL_4LFB_032 IL_29346.1 | |
| IL_4V7P_338 | 1/DA/779:783, 1/DA/799:803 | tSH-tHW-tHS Not in a motif group | homologous IL_4LFB_033 IL_17136.1 | |
| IL_4V7P_339 | 1/DA/887:894, 1/DA/905:910 | 8x6 Sarcin-Ricin with inserted Y; G-bulge Not in a motif group | homologous IL_4LFB_034 IL_24606.2 | |
| IL_4V7P_340 | 1/DA/922:923, 1/DA/1393:1395 | Single bulged A Not in a motif group | homologous IL_5J7L_039 IL_37497.2 | |
| IL_4V7P_341 | 1/DA/925:927, 1/DA/1390:1391 | Single bulged G Not in a motif group | homologous IL_4LFB_036 IL_00225.2 | |
| IL_4V7P_342 | 1/DA/933:935, 1/DA/1380:1384 | Minor groove platform Not in a motif group | homologous IL_5J7L_041 IL_47078.1 | |
| IL_4V7P_343 | 1/DA/953:954, 1/DA/1226:1228 | No text annotation Not in a motif group | homologous IL_6CZR_150 NA | |
| IL_4V7P_344 | 1/DA/993:997, 1/DA/1044:1045 | Minor groove platform Not in a motif group | homologous IL_4LFB_039 IL_47078.1 | |
| IL_4V7P_345 | 1/DA/1048:1050, 1/DA/1208:1209 | No text annotation Not in a motif group | homologous IL_6CZR_152 NA | |
| IL_4V7P_346 | 1/DA/1052:1056, 1/DA/1204:1206 | Isolated cWS basepair Not in a motif group | homologous IL_4LFB_044 IL_76319.2 | |
| IL_4V7P_347 | 1/DA/1057:1058, 1/DA/1199:1203 | Minor groove platform Not in a motif group | homologous IL_5J7L_048 IL_93353.1 | |
| IL_4V7P_348 | 1/DA/1060:1061, 1/DA/1195:1197 | Single bulged U Not in a motif group | geometric IL_5J7L_046 IL_83039.13 | |
| IL_4V7P_349 | 1/DA/1061:1063, 1/DA/1193:1195 | No text annotation Not in a motif group | homologous IL_4LFB_047 IL_95997.1 | |
| IL_4V7P_350 | 1/DA/1124:1127, 1/DA/1145:1149 | No text annotation Not in a motif group | ||
| IL_4V7P_351 | 1/DA/1127:1128, 1/DA/1143:1145 | Single stack bend Not in a motif group | geometric IL_7A0S_005 IL_76488.2 | |
| IL_4V7P_352 | 1/DA/1128:1132, 1/DA/1142:1143 | Minor groove platform Not in a motif group | geometric IL_4LFB_049 IL_15052.1 | |
| IL_4V7P_353 | 1/DA/1158:1161, 1/DA/1175:1181 | No text annotation Not in a motif group | homologous IL_5J7L_053 IL_42032.1 | |
| IL_4V7P_354 | 1/DA/1246:1253, 1/DA/1284:1291 | No text annotation Not in a motif group | ||
| IL_4V7P_355 | 1/DA/1255:1258, 1/DA/1277:1282 | No text annotation Not in a motif group | homologous IL_4LFB_052 IL_84205.1 | |
| IL_4V7P_356 | 1/DA/1259:1262, 1/DA/1273:1276 | Double sheared Not in a motif group | geometric IL_5J7L_256 IL_09705.9 | |
| IL_4V7P_357 | 1/DA/1303:1308, 1/DA/1329:1334 | No text annotation Not in a motif group | homologous IL_4LFB_055 IL_19954.2 | |
| IL_4V7P_358 | 1/DA/1399:1401, 1/DA/1501:1504 | No text annotation Not in a motif group | homologous IL_5J7L_058 IL_36143.3 | |
| IL_4V7P_359 | 1/DA/1401:1404, 1/DA/1497:1501 | No text annotation Not in a motif group | geometric IL_4V88_464 IL_99670.1 | |
| IL_4V7P_360 | 1/DA/1405:1407, 1/DA/1494:1496 | No text annotation Not in a motif group | geometric IL_4WF9_020 IL_95997.1 | |
| IL_4V7P_361 | 1/DA/1407:1409, 1/DA/1491:1494 | Decoding loop related Not in a motif group | geometric IL_3C3Z_002 IL_64417.1 | |
| IL_4V7P_362 | 1/DA/1412:1414, 1/DA/1486:1488 | No text annotation Not in a motif group | homologous IL_5J7L_061 IL_95997.1 | |
| IL_4V7P_363 | 1/DA/1416:1419, 1/DA/1481:1484 | Double sheared Not in a motif group | homologous IL_5J7L_062 IL_09705.9 | |
| IL_4V7P_364 | 1/DA/1431:1435, 1/DA/1466:1469 | UAA/GAN variation Not in a motif group | geometric IL_4LFB_062 IL_07235.1 | |
| IL_4V7P_365 | 1/DA/1435:1437, 1/DA/1464:1466 | No text annotation Not in a motif group | homologous IL_4LFB_063 IL_95997.1 | |
| IL_4V7P_366 | 1/DA/1440:1447, 1/DA/1459:1461 | Isolated basepair with bulged bases Not in a motif group | homologous IL_6CZR_172 IL_92788.2 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_4V7P_010 | No text annotation | ||
| IL_4V7P_076 | No text annotation | ||
| IL_4V7P_111 | No text annotation | ||
| IL_4V7P_112 | Major groove platform with extra cWW | ||
| IL_4V7P_151 | No text annotation | ||
| IL_4V7P_152 | No text annotation | ||
| IL_4V7P_153 | No text annotation | ||
| IL_4V7P_154 | Kink-turn | ||
| IL_4V7P_167 | No text annotation | ||
| IL_4V7P_196 | No text annotation | ||
| IL_4V7P_271 | No text annotation | ||
| IL_4V7P_272 | No text annotation | ||
| IL_4V7P_273 | No text annotation | ||
| IL_4V7P_287 | No text annotation | ||
| IL_4V7P_313 | No text annotation | ||
| IL_4V7P_321 | Single bulged G |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J3_4V7P_001 | 1/AA/826:829, 1/AA/857:861, 1/AA/868:874 | No text annotation Not in a motif group | homologous J3_4LFB_001 NA | |
| J3_4V7P_002 | 1/AA/936:939, 1/AA/1344:1350, 1/AA/1372:1379 | No text annotation Not in a motif group | homologous J3_4LFB_002 NA | |
| J3_4V7P_003 | 1/AA/943:946, 1/AA/1235:1237, 1/AA/1337:1340 | No text annotation Not in a motif group | homologous J3_4LFB_003 NA | |
| J3_4V7P_004 | 1/AA/955:962, 1/AA/973:984, 1/AA/1221:1225 | No text annotation Not in a motif group | ||
| J3_4V7P_005 | 1/AA/990:993, 1/AA/1045:1047, 1/AA/1210:1215 | No text annotation Not in a motif group | ||
| J3_4V7P_006 | 1/AA/1003:1006, 1/AA/1023:1027, 1/AA/1034:1037 | No text annotation Not in a motif group | ||
| J3_4V7P_007 | 1/AA/1063:1068, 1/AA/1107:1113, 1/AA/1187:1193 | No text annotation Not in a motif group | ||
| J3_4V7P_008 | 1/AA/1116:1118, 1/AA/1155:1158, 1/AA/1181:1184 | No text annotation Not in a motif group | ||
| J3_4V7P_009 | 1/AA/1237:1241, 1/AA/1296:1303, 1/AA/1334:1337 | No text annotation Not in a motif group | ||
| J3_4V7P_010 | 1/BA/683:689, 1/BA/773:775, 1/BA/791:794 | No text annotation Not in a motif group | ||
| J3_4V7P_011 | 1/BA/698:700, 1/BA/732:736, 1/BA/760:763 | No text annotation Not in a motif group | homologous J3_4WF9_003 NA | |
| J3_4V7P_013 | 1/BA/1298:1303, 1/BA/1625:1627, 1/BA/1639:1642 | No text annotation Not in a motif group | homologous J3_7RQB_007 NA | |
| J3_4V7P_014 | 1/BA/1306:1309, 1/BA/1605:1611, 1/BA/1620:1622 | No text annotation Not in a motif group | homologous J3_7RQB_008 NA | |
| J3_4V7P_015 | 1/BA/2091:2093, 1/BA/2196:2205, 1/BA/2219:2228 | No text annotation Not in a motif group | homologous J3_7RQB_010 NA | |
| J3_4V7P_016 | 1/BA/2295:2297, 1/BA/2321:2323, 1/BA/2332:2337 | No text annotation Not in a motif group | homologous J3_7RQB_011 NA | |
| J3_4V7P_017 | 1/BA/2517:2520, 1/BA/2545:2547, 1/BA/2561:2567 | No text annotation Not in a motif group | homologous J3_7RQB_012 NA | |
| J3_4V7P_018 | 1/BB/11:16, 1/BB/68:70, 1/BB/106:109 | No text annotation Not in a motif group | ||
| J3_4V7P_019 | 1/CA/683:689, 1/CA/773:775, 1/CA/791:794 | No text annotation Not in a motif group | ||
| J3_4V7P_020 | 1/CA/698:700, 1/CA/732:736, 1/CA/760:763 | No text annotation Not in a motif group | homologous J3_4WF9_003 NA | |
| J3_4V7P_021 | 1/CA/1055:1057, 1/CA/1081:1087, 1/CA/1102:1104 | No text annotation Not in a motif group | homologous J3_5J7L_040 NA | |
| J3_4V7P_022 | 1/CA/1298:1303, 1/CA/1625:1627, 1/CA/1639:1642 | No text annotation Not in a motif group | homologous J3_7RQB_007 NA | |
| J3_4V7P_023 | 1/CA/1306:1309, 1/CA/1605:1611, 1/CA/1620:1622 | No text annotation Not in a motif group | homologous J3_7RQB_008 NA | |
| J3_4V7P_024 | 1/CA/2091:2093, 1/CA/2196:2205, 1/CA/2219:2228 | No text annotation Not in a motif group | homologous J3_7RQB_010 NA | |
| J3_4V7P_025 | 1/CA/2295:2297, 1/CA/2321:2323, 1/CA/2332:2337 | No text annotation Not in a motif group | homologous J3_7RQB_011 NA | |
| J3_4V7P_026 | 1/CA/2517:2520, 1/CA/2545:2547, 1/CA/2561:2567 | No text annotation Not in a motif group | homologous J3_7RQB_012 NA | |
| J3_4V7P_027 | 1/CB/11:16, 1/CB/68:70, 1/CB/106:109 | No text annotation Not in a motif group | ||
| J3_4V7P_028 | 1/DA/826:829, 1/DA/857:861, 1/DA/868:874 | No text annotation Not in a motif group | homologous J3_4LFB_001 NA | |
| J3_4V7P_029 | 1/DA/936:939, 1/DA/1344:1350, 1/DA/1372:1379 | No text annotation Not in a motif group | homologous J3_4LFB_002 NA | |
| J3_4V7P_030 | 1/DA/943:946, 1/DA/1235:1237, 1/DA/1337:1340 | No text annotation Not in a motif group | homologous J3_4LFB_003 NA | |
| J3_4V7P_031 | 1/DA/955:962, 1/DA/973:984, 1/DA/1221:1225 | No text annotation Not in a motif group | ||
| J3_4V7P_032 | 1/DA/990:993, 1/DA/1045:1047, 1/DA/1210:1215 | No text annotation Not in a motif group | ||
| J3_4V7P_033 | 1/DA/1003:1006, 1/DA/1023:1027, 1/DA/1034:1037 | No text annotation Not in a motif group | ||
| J3_4V7P_034 | 1/DA/1063:1068, 1/DA/1107:1113, 1/DA/1187:1193 | No text annotation Not in a motif group | ||
| J3_4V7P_035 | 1/DA/1116:1118, 1/DA/1155:1158, 1/DA/1181:1184 | No text annotation Not in a motif group | ||
| J3_4V7P_036 | 1/DA/1237:1241, 1/DA/1296:1303, 1/DA/1334:1337 | No text annotation Not in a motif group |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| J3_4V7P_012 | No text annotation |
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