4V9C Internal, Hairpin and 3-way Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_4V9C_001 | 1/AA/12:22 | No text annotation Not in a motif group | homologous HL_5J7L_001 HL_89881.2 | |
| HL_4V9C_002 | 1/AA/79:90 | No text annotation Not in a motif group | ||
| HL_4V9C_003 | 1/AA/156:165 | No text annotation Not in a motif group | ||
| HL_4V9C_004 | 1/AA/185:192 | No text annotation Not in a motif group | geometric HL_7A0S_056 HL_84085.2 | |
| HL_4V9C_005 | 1/AA/207:212 | No text annotation Not in a motif group | ||
| HL_4V9C_006 | 1/AA/259:267 | No text annotation Not in a motif group | homologous HL_5J7L_006 HL_69023.2 | |
| HL_4V9C_007 | 1/AA/296:301 | GNRA Not in a motif group | homologous HL_4LFB_007 HL_42097.1 | |
| HL_4V9C_008 | 1/AA/320:333 | No text annotation Not in a motif group | homologous HL_5J7L_008 HL_81205.2 | |
| HL_4V9C_009 | 1/AA/342:347 | No text annotation Not in a motif group | geometric HL_6QN3_003 HL_03562.2 | |
| HL_4V9C_010 | 1/AA/379:384 | GNRA Not in a motif group | homologous HL_5J7L_010 HL_42097.1 | |
| HL_4V9C_011 | 1/AA/419:424 | UNCG Not in a motif group | homologous HL_5J7L_011 HL_03562.2 | |
| HL_4V9C_012 | 1/AA/460:472 | No text annotation Not in a motif group | ||
| HL_4V9C_013 | 1/AA/522:527 | No text annotation Not in a motif group | geometric HL_4WF9_003 HL_75407.1 | |
| HL_4V9C_014 | 1/AA/617:623 | No text annotation Not in a motif group | homologous HL_5J7L_014 HL_26881.1 | |
| HL_4V9C_015 | 1/AA/689:698 | No text annotation Not in a motif group | homologous HL_5J7L_015 HL_12326.1 | |
| HL_4V9C_016 | 1/AA/726:731 | Other HL Not in a motif group | homologous HL_5J7L_016 HL_87030.2 | |
| HL_4V9C_017 | 1/AA/786:796 | No text annotation Not in a motif group | homologous HL_5J7L_017 HL_12326.1 | |
| HL_4V9C_018 | 1/AA/839:847 | No text annotation Not in a motif group | ||
| HL_4V9C_019 | 1/AA/862:867 | GNRA Not in a motif group | homologous HL_4LFB_019 HL_42097.1 | |
| HL_4V9C_020 | 1/AA/897:902 | GNRA Not in a motif group | homologous HL_5J7L_020 HL_42097.1 | |
| HL_4V9C_021 | 1/AA/963:972 | No text annotation Not in a motif group | homologous HL_4LFB_021 NA | |
| HL_4V9C_022 | 1/AA/1011:1018 | No text annotation Not in a motif group | homologous HL_6CZR_093 NA | |
| HL_4V9C_023 | 1/AA/1076:1081 | GNRA Not in a motif group | homologous HL_4LFB_024 HL_42097.1 | |
| HL_4V9C_024 | 1/AA/1089:1096 | No text annotation Not in a motif group | homologous HL_5J7L_024 HL_71554.2 | |
| HL_4V9C_025 | 1/AA/1134:1140 | No text annotation Not in a motif group | ||
| HL_4V9C_026 | 1/AA/1165:1171 | No text annotation Not in a motif group | homologous HL_5J7L_026 HL_90617.2 | |
| HL_4V9C_027 | 1/AA/1265:1270 | Other HL Not in a motif group | homologous HL_4LFB_028 HL_42097.1 | |
| HL_4V9C_028 | 1/AA/1314:1323 | No text annotation Not in a motif group | homologous HL_4LFB_029 HL_89380.2 | |
| HL_4V9C_029 | 1/AA/1356:1366 | No text annotation Not in a motif group | homologous HL_4LFB_030 HL_96366.1 | |
| HL_4V9C_030 | 1/AA/1449:1454 | UNCG Not in a motif group | homologous HL_4LFB_031 HL_03562.2 | |
| HL_4V9C_031 | 1/AA/1515:1520 | No text annotation Not in a motif group | homologous HL_6CZR_103 NA | |
| HL_4V9C_033 | 1/AV/31:39 | tRNA anticodon loop Not in a motif group | homologous HL_4V90_033 HL_53597.2 | |
| HL_4V9C_035 | 1/BA/59:68 | No text annotation Not in a motif group | homologous HL_5J7L_134 HL_18177.1 | |
| HL_4V9C_036 | 1/BA/87:95 | No text annotation Not in a motif group | homologous HL_5J7L_135 HL_84193.1 | |
| HL_4V9C_037 | 1/BA/123:128 | No text annotation Not in a motif group | homologous HL_5J7L_136 HL_75407.1 | |
| HL_4V9C_038 | 1/BA/135:144 | No text annotation Not in a motif group | ||
| HL_4V9C_039 | 1/BA/158:168 | No text annotation Not in a motif group | homologous HL_5J7L_138 HL_81820.1 | |
| HL_4V9C_040 | 1/BA/188:208 | No text annotation Not in a motif group | ||
| HL_4V9C_041 | 1/BA/225:230 | No text annotation Not in a motif group | homologous HL_5J7L_140 HL_27930.1 | |
| HL_4V9C_042 | 1/BA/246:252 | No text annotation Not in a motif group | homologous HL_7RQB_008 HL_67216.7 | |
| HL_4V9C_043 | 1/BA/305:312 | T-loop with 1 bulged base Not in a motif group | homologous HL_4WF9_010 HL_89380.2 | |
| HL_4V9C_044 | 1/BA/319:323 | No text annotation Not in a motif group | homologous HL_5J7L_143 HL_75407.1 | |
| HL_4V9C_045 | 1/BA/327:335 | No text annotation Not in a motif group | homologous HL_5J7L_144 HL_08002.8 | |
| HL_4V9C_046 | 1/BA/382:392 | No text annotation Not in a motif group | homologous HL_5J7L_145 HL_91503.4 | |
| HL_4V9C_047 | 1/BA/410:417 | No text annotation Not in a motif group | homologous HL_5J7L_146 HL_96598.1 | |
| HL_4V9C_048 | 1/BA/462:467 | GNRA Not in a motif group | homologous HL_4WF9_015 HL_42097.1 | |
| HL_4V9C_049 | 1/BA/487:493 | No text annotation Not in a motif group | homologous HL_5J7L_148 HL_42097.1 | |
| HL_4V9C_050 | 1/BA/543:550 | No text annotation Not in a motif group | geometric HL_5TBW_006 HL_98984.2 | |
| HL_4V9C_051 | 1/BA/566:575 | T-loop with 2 stacked bulged bases Not in a motif group | geometric HL_5J7L_150 HL_89380.2 | |
| HL_4V9C_052 | 1/BA/611:617 | No text annotation Not in a motif group | geometric HL_5J7L_151 HL_90617.2 | |
| HL_4V9C_053 | 1/BA/629:634 | GNRA Not in a motif group | homologous HL_5J7L_152 HL_42097.1 | |
| HL_4V9C_054 | 1/BA/641:647 | No text annotation Not in a motif group | homologous HL_5J7L_153 HL_77805.2 | |
| HL_4V9C_055 | 1/BA/712:719 | No text annotation Not in a motif group | homologous HL_5J7L_154 HL_84085.2 | |
| HL_4V9C_056 | 1/BA/744:753 | No text annotation Not in a motif group | homologous HL_4WF9_023 HL_39334.6 | |
| HL_4V9C_057 | 1/BA/779:785 | No text annotation Not in a motif group | homologous HL_7A0S_023 HL_27930.1 | |
| HL_4V9C_058 | 1/BA/826:831 | No text annotation Not in a motif group | homologous HL_4WF9_025 HL_64365.1 | |
| HL_4V9C_060 | 1/BA/955:962 | GNRA Not in a motif group | homologous HL_4WF9_027 HL_42097.1 | |
| HL_4V9C_061 | 1/BA/978:985 | No text annotation Not in a motif group | homologous HL_7A0S_027 HL_64430.2 | |
| HL_4V9C_062 | 1/BA/1063:1076 | No text annotation Not in a motif group | ||
| HL_4V9C_063 | 1/BA/1092:1099 | No text annotation Not in a motif group | homologous HL_6PRV_002 HL_84085.2 | |
| HL_4V9C_064 | 1/BA/1172:1177 | No text annotation Not in a motif group | ||
| HL_4V9C_065 | 1/BA/1222:1227 | Other HL Not in a motif group | homologous HL_5J7L_164 HL_87030.2 | |
| HL_4V9C_066 | 1/BA/1281:1289 | T-loop with 2 stacked bulged bases Not in a motif group | homologous HL_5J7L_165 HL_89380.2 | |
| HL_4V9C_067 | 1/BA/1324:1330 | No text annotation Not in a motif group | homologous HL_5J7L_166 HL_46680.1 | |
| HL_4V9C_068 | 1/BA/1363:1368 | Other HL Not in a motif group | homologous HL_5J7L_167 HL_87030.2 | |
| HL_4V9C_069 | 1/BA/1389:1398 | No text annotation Not in a motif group | homologous HL_5J7L_168 HL_69023.2 | |
| HL_4V9C_070 | 1/BA/1451:1459 | No text annotation Not in a motif group | geometric HL_1ZBH_001 HL_65572.2 | |
| HL_4V9C_071 | 1/BA/1492:1498 | No text annotation Not in a motif group | ||
| HL_4V9C_072 | 1/BA/1531:1540 | No text annotation Not in a motif group | ||
| HL_4V9C_073 | 1/BA/1565:1568 | No text annotation Not in a motif group | homologous HL_5J7L_172 HL_38927.2 | |
| HL_4V9C_074 | 1/BA/1612:1619 | No text annotation Not in a motif group | homologous HL_7RQB_040 HL_64430.2 | |
| HL_4V9C_075 | 1/BA/1630:1636 | GNRA with one bulged base Not in a motif group | homologous HL_5J7L_174 HL_42097.1 | |
| HL_4V9C_076 | 1/BA/1691:1696 | No text annotation Not in a motif group | homologous HL_7RQB_042 HL_03562.2 | |
| HL_4V9C_077 | 1/BA/1720:1740 | No text annotation Not in a motif group | ||
| HL_4V9C_078 | 1/BA/1752:1756 | No text annotation Not in a motif group | homologous HL_5J7L_177 HL_76539.2 | |
| HL_4V9C_079 | 1/BA/1777:1787 | No text annotation Not in a motif group | homologous HL_5J7L_178 HL_43613.5 | |
| HL_4V9C_080 | 1/BA/1806:1811 | No text annotation Not in a motif group | homologous HL_5J7L_179 HL_42097.1 | |
| HL_4V9C_081 | 1/BA/1868:1873 | Other HL Not in a motif group | geometric HL_5J7L_180 HL_42097.1 | |
| HL_4V9C_082 | 1/BA/1910:1920 | No text annotation Not in a motif group | geometric HL_5TBW_049 HL_71924.2 | |
| HL_4V9C_083 | 1/BA/1949:1957 | No text annotation Not in a motif group | homologous HL_7RQB_049 HL_51824.1 | |
| HL_4V9C_084 | 1/BA/2027:2036 | No text annotation Not in a motif group | homologous HL_4WF9_047 HL_90642.6 | |
| HL_4V9C_085 | 1/BA/2140:2151 | No text annotation Not in a motif group | ||
| HL_4V9C_086 | 1/BA/2209:2215 | No text annotation Not in a motif group | homologous HL_5J7L_185 HL_16845.6 | |
| HL_4V9C_087 | 1/BA/2248:2256 | No text annotation Not in a motif group | homologous HL_7RQB_053 NA | |
| HL_4V9C_088 | 1/BA/2264:2276 | No text annotation Not in a motif group | homologous HL_5J7L_187 HL_19870.6 | |
| HL_4V9C_089 | 1/BA/2301:2315 | No text annotation Not in a motif group | ||
| HL_4V9C_090 | 1/BA/2324:2331 | No text annotation Not in a motif group | homologous HL_5J7L_189 HL_12078.2 | |
| HL_4V9C_091 | 1/BA/2356:2361 | Other HL Not in a motif group | homologous HL_5J7L_190 HL_87030.2 | |
| HL_4V9C_092 | 1/BA/2374:2379 | GNRA Not in a motif group | homologous HL_5J7L_191 HL_42097.1 | |
| HL_4V9C_093 | 1/BA/2404:2413 | No text annotation Not in a motif group | homologous HL_5J7L_192 HL_30784.2 | |
| HL_4V9C_094 | 1/BA/2471:2479 | No text annotation Not in a motif group | homologous HL_5J7L_193 HL_06192.2 | |
| HL_4V9C_095 | 1/BA/2527:2536 | No text annotation Not in a motif group | geometric HL_5J7L_151 HL_90617.2 | |
| HL_4V9C_096 | 1/BA/2551:2557 | No text annotation Not in a motif group | homologous HL_4WF9_058 HL_43656.2 | |
| HL_4V9C_097 | 1/BA/2594:2599 | GNRA Not in a motif group | homologous HL_5J7L_196 HL_42097.1 | |
| HL_4V9C_098 | 1/BA/2658:2663 | GNRA Not in a motif group | geometric HL_5XTM_002 HL_42097.1 | |
| HL_4V9C_099 | 1/BA/2701:2706 | Ribsomal LSU H95 Not in a motif group | homologous HL_5J7L_198 HL_46680.1 | |
| HL_4V9C_100 | 1/BA/2745:2759 | No text annotation Not in a motif group | homologous HL_5J7L_199 HL_56677.7 | |
| HL_4V9C_101 | 1/BA/2796:2799 | No text annotation Not in a motif group | geometric HL_5TBW_071 HL_53837.1 | |
| HL_4V9C_102 | 1/BA/2819:2827 | No text annotation Not in a motif group | homologous HL_5J7L_201 HL_27930.1 | |
| HL_4V9C_103 | 1/BA/2856:2861 | Other HL Not in a motif group | homologous HL_5J7L_202 HL_42097.1 | |
| HL_4V9C_104 | 1/BB/34:48 | No text annotation Not in a motif group | ||
| HL_4V9C_105 | 1/BB/86:90 | No text annotation Not in a motif group | homologous HL_5J7L_204 HL_38927.2 | |
| HL_4V9C_106 | 1/CA/12:22 | No text annotation Not in a motif group | homologous HL_5J7L_001 HL_89881.2 | |
| HL_4V9C_107 | 1/CA/75:95 | No text annotation Not in a motif group | ||
| HL_4V9C_108 | 1/CA/158:163 | GNRA Not in a motif group | homologous HL_4LFB_003 HL_42097.1 | |
| HL_4V9C_109 | 1/CA/186:191 | No text annotation Not in a motif group | ||
| HL_4V9C_110 | 1/CA/206:213 | No text annotation Not in a motif group | ||
| HL_4V9C_111 | 1/CA/259:267 | No text annotation Not in a motif group | homologous HL_5J7L_006 HL_69023.2 | |
| HL_4V9C_112 | 1/CA/296:301 | GNRA Not in a motif group | homologous HL_5J7L_007 HL_42097.1 | |
| HL_4V9C_113 | 1/CA/320:333 | No text annotation Not in a motif group | homologous HL_4LFB_008 HL_81205.2 | |
| HL_4V9C_114 | 1/CA/342:347 | UNCG Not in a motif group | homologous HL_5J7L_009 HL_03562.2 | |
| HL_4V9C_115 | 1/CA/379:384 | GNRA Not in a motif group | homologous HL_5J7L_010 HL_42097.1 | |
| HL_4V9C_116 | 1/CA/419:424 | UNCG Not in a motif group | homologous HL_5J7L_011 HL_03562.2 | |
| HL_4V9C_117 | 1/CA/462:470 | No text annotation Not in a motif group | ||
| HL_4V9C_118 | 1/CA/522:527 | No text annotation Not in a motif group | geometric HL_5J7L_143 HL_75407.1 | |
| HL_4V9C_119 | 1/CA/617:623 | No text annotation Not in a motif group | homologous HL_5J7L_014 HL_26881.1 | |
| HL_4V9C_120 | 1/CA/689:698 | No text annotation Not in a motif group | homologous HL_4LFB_015 HL_12326.1 | |
| HL_4V9C_121 | 1/CA/726:731 | Other HL Not in a motif group | homologous HL_5J7L_016 HL_87030.2 | |
| HL_4V9C_122 | 1/CA/785:797 | No text annotation Not in a motif group | ||
| HL_4V9C_123 | 1/CA/840:846 | No text annotation Not in a motif group | ||
| HL_4V9C_124 | 1/CA/862:867 | GNRA Not in a motif group | homologous HL_4LFB_019 HL_42097.1 | |
| HL_4V9C_125 | 1/CA/897:902 | GNRA Not in a motif group | homologous HL_4LFB_020 HL_42097.1 | |
| HL_4V9C_126 | 1/CA/963:972 | No text annotation Not in a motif group | homologous HL_4LFB_021 NA | |
| HL_4V9C_127 | 1/CA/1012:1017 | Other HL Not in a motif group | geometric HL_4V88_210 HL_42097.1 | |
| HL_4V9C_128 | 1/CA/1076:1081 | GNRA Not in a motif group | homologous HL_4LFB_024 HL_42097.1 | |
| HL_4V9C_129 | 1/CA/1089:1096 | No text annotation Not in a motif group | homologous HL_5J7L_024 HL_71554.2 | |
| HL_4V9C_130 | 1/CA/1133:1141 | No text annotation Not in a motif group | ||
| HL_4V9C_131 | 1/CA/1165:1171 | No text annotation Not in a motif group | homologous HL_5J7L_026 HL_90617.2 | |
| HL_4V9C_132 | 1/CA/1265:1270 | GNRA Not in a motif group | homologous HL_5J7L_027 HL_42097.1 | |
| HL_4V9C_133 | 1/CA/1314:1323 | No text annotation Not in a motif group | homologous HL_4LFB_029 HL_89380.2 | |
| HL_4V9C_134 | 1/CA/1356:1366 | No text annotation Not in a motif group | homologous HL_5J7L_029 HL_96366.1 | |
| HL_4V9C_135 | 1/CA/1449:1454 | UNCG Not in a motif group | homologous HL_4LFB_031 HL_03562.2 | |
| HL_4V9C_136 | 1/CA/1515:1520 | No text annotation Not in a motif group | homologous HL_4LFB_032 NA | |
| HL_4V9C_138 | 1/CV/31:39 | tRNA anticodon loop Not in a motif group | homologous HL_4V90_033 HL_53597.2 | |
| HL_4V9C_140 | 1/DA/59:68 | No text annotation Not in a motif group | homologous HL_5J7L_134 HL_18177.1 | |
| HL_4V9C_141 | 1/DA/87:95 | No text annotation Not in a motif group | homologous HL_5J7L_135 HL_84193.1 | |
| HL_4V9C_142 | 1/DA/123:128 | No text annotation Not in a motif group | homologous HL_5J7L_136 HL_75407.1 | |
| HL_4V9C_143 | 1/DA/134:145 | No text annotation Not in a motif group | ||
| HL_4V9C_144 | 1/DA/157:169 | No text annotation Not in a motif group | ||
| HL_4V9C_145 | 1/DA/194:201 | No text annotation Not in a motif group | homologous HL_5J7L_139 HL_06192.2 | |
| HL_4V9C_146 | 1/DA/225:230 | No text annotation Not in a motif group | homologous HL_5J7L_140 HL_27930.1 | |
| HL_4V9C_147 | 1/DA/246:252 | No text annotation Not in a motif group | homologous HL_5J7L_141 HL_67216.7 | |
| HL_4V9C_148 | 1/DA/305:312 | T-loop with 1 bulged base Not in a motif group | homologous HL_5J7L_142 HL_89380.2 | |
| HL_4V9C_149 | 1/DA/319:323 | No text annotation Not in a motif group | homologous HL_5J7L_143 HL_75407.1 | |
| HL_4V9C_150 | 1/DA/327:335 | No text annotation Not in a motif group | homologous HL_5J7L_144 HL_08002.8 | |
| HL_4V9C_151 | 1/DA/382:392 | No text annotation Not in a motif group | homologous HL_5J7L_145 HL_91503.4 | |
| HL_4V9C_152 | 1/DA/410:417 | No text annotation Not in a motif group | homologous HL_5J7L_146 HL_96598.1 | |
| HL_4V9C_153 | 1/DA/462:467 | GNRA Not in a motif group | homologous HL_4WF9_015 HL_42097.1 | |
| HL_4V9C_154 | 1/DA/487:493 | No text annotation Not in a motif group | homologous HL_5J7L_148 HL_42097.1 | |
| HL_4V9C_155 | 1/DA/543:550 | No text annotation Not in a motif group | homologous HL_5J7L_149 HL_79531.1 | |
| HL_4V9C_156 | 1/DA/566:575 | T-loop with 2 stacked bulged bases Not in a motif group | homologous HL_5J7L_150 HL_89380.2 | |
| HL_4V9C_157 | 1/DA/611:617 | No text annotation Not in a motif group | homologous HL_5J7L_151 HL_90617.2 | |
| HL_4V9C_158 | 1/DA/629:634 | GNRA Not in a motif group | homologous HL_5J7L_152 HL_42097.1 | |
| HL_4V9C_159 | 1/DA/641:647 | No text annotation Not in a motif group | homologous HL_5J7L_153 HL_77805.2 | |
| HL_4V9C_160 | 1/DA/712:719 | No text annotation Not in a motif group | homologous HL_5J7L_154 HL_84085.2 | |
| HL_4V9C_161 | 1/DA/744:753 | No text annotation Not in a motif group | homologous HL_4WF9_023 HL_39334.6 | |
| HL_4V9C_162 | 1/DA/779:785 | No text annotation Not in a motif group | homologous HL_7A0S_023 HL_27930.1 | |
| HL_4V9C_163 | 1/DA/826:831 | No text annotation Not in a motif group | homologous HL_5J7L_157 HL_64365.1 | |
| HL_4V9C_165 | 1/DA/955:962 | GNRA Not in a motif group | homologous HL_4WF9_027 HL_42097.1 | |
| HL_4V9C_166 | 1/DA/978:985 | No text annotation Not in a motif group | homologous HL_7A0S_027 HL_64430.2 | |
| HL_4V9C_167 | 1/DA/1090:1101 | No text annotation Not in a motif group | ||
| HL_4V9C_168 | 1/DA/1172:1177 | No text annotation Not in a motif group | ||
| HL_4V9C_169 | 1/DA/1222:1227 | Other HL Not in a motif group | homologous HL_5J7L_164 HL_87030.2 | |
| HL_4V9C_170 | 1/DA/1281:1289 | T-loop with 2 stacked bulged bases Not in a motif group | homologous HL_5J7L_165 HL_89380.2 | |
| HL_4V9C_171 | 1/DA/1324:1330 | No text annotation Not in a motif group | homologous HL_5J7L_166 HL_46680.1 | |
| HL_4V9C_172 | 1/DA/1363:1368 | Other HL Not in a motif group | homologous HL_5J7L_167 HL_87030.2 | |
| HL_4V9C_173 | 1/DA/1389:1398 | No text annotation Not in a motif group | homologous HL_7RQB_036 HL_69023.2 | |
| HL_4V9C_174 | 1/DA/1451:1459 | No text annotation Not in a motif group | homologous HL_5J7L_169 HL_53837.1 | |
| HL_4V9C_175 | 1/DA/1492:1498 | No text annotation Not in a motif group | homologous HL_5J7L_170 HL_46680.1 | |
| HL_4V9C_176 | 1/DA/1531:1540 | No text annotation Not in a motif group | ||
| HL_4V9C_177 | 1/DA/1565:1568 | No text annotation Not in a motif group | homologous HL_5J7L_172 HL_38927.2 | |
| HL_4V9C_178 | 1/DA/1612:1619 | No text annotation Not in a motif group | homologous HL_7RQB_040 HL_64430.2 | |
| HL_4V9C_179 | 1/DA/1630:1636 | GNRA with one bulged base Not in a motif group | homologous HL_5J7L_174 HL_42097.1 | |
| HL_4V9C_180 | 1/DA/1691:1696 | UNCG Not in a motif group | geometric HL_5J7L_175 HL_03562.2 | |
| HL_4V9C_181 | 1/DA/1720:1740 | No text annotation Not in a motif group | ||
| HL_4V9C_182 | 1/DA/1752:1756 | No text annotation Not in a motif group | homologous HL_5J7L_177 HL_76539.2 | |
| HL_4V9C_183 | 1/DA/1777:1787 | No text annotation Not in a motif group | homologous HL_4WF9_043 HL_43613.5 | |
| HL_4V9C_184 | 1/DA/1806:1811 | No text annotation Not in a motif group | homologous HL_5J7L_179 HL_42097.1 | |
| HL_4V9C_185 | 1/DA/1868:1873 | Other HL Not in a motif group | homologous HL_5J7L_180 HL_42097.1 | |
| HL_4V9C_186 | 1/DA/1910:1920 | No text annotation Not in a motif group | ||
| HL_4V9C_187 | 1/DA/1949:1957 | No text annotation Not in a motif group | homologous HL_7RQB_049 HL_51824.1 | |
| HL_4V9C_188 | 1/DA/2027:2036 | No text annotation Not in a motif group | homologous HL_4WF9_047 HL_90642.6 | |
| HL_4V9C_190 | 1/DA/2209:2215 | No text annotation Not in a motif group | homologous HL_5J7L_185 HL_16845.6 | |
| HL_4V9C_191 | 1/DA/2248:2256 | No text annotation Not in a motif group | homologous HL_5J7L_186 NA | |
| HL_4V9C_192 | 1/DA/2264:2276 | No text annotation Not in a motif group | homologous HL_5J7L_187 HL_19870.6 | |
| HL_4V9C_193 | 1/DA/2303:2313 | No text annotation Not in a motif group | homologous HL_7RQB_055 HL_11805.3 | |
| HL_4V9C_194 | 1/DA/2324:2331 | No text annotation Not in a motif group | homologous HL_5J7L_189 HL_12078.2 | |
| HL_4V9C_195 | 1/DA/2356:2361 | Other HL Not in a motif group | homologous HL_5J7L_190 HL_87030.2 | |
| HL_4V9C_196 | 1/DA/2374:2379 | GNRA Not in a motif group | homologous HL_5J7L_191 HL_42097.1 | |
| HL_4V9C_197 | 1/DA/2404:2413 | No text annotation Not in a motif group | homologous HL_5J7L_192 HL_30784.2 | |
| HL_4V9C_198 | 1/DA/2471:2479 | No text annotation Not in a motif group | homologous HL_5J7L_193 HL_06192.2 | |
| HL_4V9C_199 | 1/DA/2528:2535 | No text annotation Not in a motif group | homologous HL_5J7L_194 HL_88526.2 | |
| HL_4V9C_200 | 1/DA/2551:2557 | No text annotation Not in a motif group | homologous HL_4WF9_058 HL_43656.2 | |
| HL_4V9C_201 | 1/DA/2594:2599 | GNRA Not in a motif group | homologous HL_5J7L_196 HL_42097.1 | |
| HL_4V9C_202 | 1/DA/2658:2663 | No text annotation Not in a motif group | homologous HL_7RQB_064 HL_42097.1 | |
| HL_4V9C_203 | 1/DA/2701:2706 | Ribsomal LSU H95 Not in a motif group | homologous HL_5J7L_198 HL_46680.1 | |
| HL_4V9C_204 | 1/DA/2745:2759 | No text annotation Not in a motif group | homologous HL_5J7L_199 HL_56677.7 | |
| HL_4V9C_205 | 1/DA/2795:2801 | No text annotation Not in a motif group | geometric HL_6VMY_004 HL_91058.1 | |
| HL_4V9C_206 | 1/DA/2819:2827 | No text annotation Not in a motif group | homologous HL_5J7L_201 HL_27930.1 | |
| HL_4V9C_207 | 1/DA/2856:2861 | Other HL Not in a motif group | homologous HL_5J7L_202 HL_42097.1 | |
| HL_4V9C_208 | 1/DB/38:44 | No text annotation Not in a motif group | geometric HL_5J7L_203 HL_87939.1 | |
| HL_4V9C_209 | 1/DB/86:90 | No text annotation Not in a motif group | homologous HL_5J7L_204 HL_38927.2 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_4V9C_032 | No text annotation | ||
| HL_4V9C_034 | T-loop with 2 stacked bulged bases | ||
| HL_4V9C_059 | No text annotation | ||
| HL_4V9C_137 | No text annotation | ||
| HL_4V9C_139 | No text annotation | ||
| HL_4V9C_164 | No text annotation | ||
| HL_4V9C_189 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_4V9C_001 | 1/AA/30:33, 1/AA/551:553 | No text annotation Not in a motif group | geometric IL_4V88_455 IL_10023.1 | |
| IL_4V9C_002 | 1/AA/44:45, 1/AA/396:398 | Single bulged A Not in a motif group | homologous IL_5J7L_002 IL_37497.2 | |
| IL_4V9C_003 | 1/AA/47:52, 1/AA/359:361 | No text annotation Not in a motif group | homologous IL_5J7L_003 IL_11178.1 | |
| IL_4V9C_004 | 1/AA/54:56, 1/AA/356:357 | Minor groove platform Not in a motif group | homologous IL_4LFB_004 IL_93353.1 | |
| IL_4V9C_005 | 1/AA/63:66, 1/AA/103:104 | Multiple bulged bases Not in a motif group | homologous IL_5J7L_005 IL_76389.1 | |
| IL_4V9C_006 | 1/AA/67:69, 1/AA/99:102 | Minor groove platform with extra cWW Not in a motif group | homologous IL_5J7L_006 IL_65006.1 | |
| IL_4V9C_007 | 1/AA/70:73, 1/AA/97:98 | Minor groove platform Not in a motif group | homologous IL_5J7L_007 IL_15052.1 | |
| IL_4V9C_009 | 1/AA/75:76, 1/AA/93:95 | Major groove intercalation Not in a motif group | geometric IL_4WF9_106 IL_16396.2 | |
| IL_4V9C_010 | 1/AA/76:79, 1/AA/90:93 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_4K27_001 IL_30621.2 | |
| IL_4V9C_011 | 1/AA/128:131, 1/AA/231:233 | No text annotation Not in a motif group | ||
| IL_4V9C_012 | 1/AA/132:136, 1/AA/227:230 | Minor groove platform related Not in a motif group | homologous IL_5J7L_010 IL_58764.3 | |
| IL_4V9C_013 | 1/AA/144:146, 1/AA/176:178 | Isolated cWH basepair Not in a motif group | homologous IL_5J7L_011 IL_51629.2 | |
| IL_4V9C_014 | 1/AA/147:154, 1/AA/167:175 | No text annotation Not in a motif group | ||
| IL_4V9C_016 | 1/AA/198:200, 1/AA/217:219 | CA cWW Not in a motif group | geometric IL_5ED2_004 IL_95997.1 | |
| IL_4V9C_017 | 1/AA/200:206, 1/AA/213:217 | No text annotation Not in a motif group | ||
| IL_4V9C_018 | 1/AA/242:247, 1/AA/277:284 | Kink-turn with non-sequential stacking Not in a motif group | homologous IL_5J7L_014 IL_45067.2 | |
| IL_4V9C_019 | 1/AA/249:252, 1/AA/274:275 | No text annotation Not in a motif group | homologous IL_5J7L_015 IL_48100.2 | |
| IL_4V9C_021 | 1/AA/292:294, 1/AA/303:308 | No text annotation Not in a motif group | ||
| IL_4V9C_023 | 1/AA/371:375, 1/AA/389:390 | C-loop Not in a motif group | homologous IL_4LFB_015 IL_75255.1 | |
| IL_4V9C_024 | 1/AA/375:376, 1/AA/387:389 | Single bulged G Not in a motif group | geometric IL_4LFB_016 IL_00225.2 | |
| IL_4V9C_025 | 1/AA/406:409, 1/AA/433:436 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_5C5W_003 IL_30621.2 | |
| IL_4V9C_026 | 1/AA/409:417, 1/AA/426:433 | No text annotation Not in a motif group | ||
| IL_4V9C_027 | 1/AA/440:442, 1/AA/492:497 | No text annotation Not in a motif group | homologous IL_5J7L_021 IL_22248.1 | |
| IL_4V9C_028 | 1/AA/445:450, 1/AA/483:489 | No text annotation Not in a motif group | ||
| IL_4V9C_029 | 1/AA/450:454, 1/AA/479:483 | No text annotation Not in a motif group | ||
| IL_4V9C_030 | 1/AA/454:455, 1/AA/477:479 | Single stack bend Not in a motif group | geometric IL_5J7L_032 IL_76488.2 | |
| IL_4V9C_032 | 1/AA/458:460, 1/AA/472:474 | No text annotation Not in a motif group | ||
| IL_4V9C_033 | 1/AA/504:511, 1/AA/540:541 | SSU/LSU pseudoknot Not in a motif group | homologous IL_5J7L_024 IL_15861.7 | |
| IL_4V9C_035 | 1/AA/515:521, 1/AA/528:536 | No text annotation Not in a motif group | geometric IL_4V88_415 IL_55871.1 | |
| IL_4V9C_036 | 1/AA/569:575, 1/AA/880:881 | No text annotation Not in a motif group | homologous IL_4LFB_022 IL_69996.1 | |
| IL_4V9C_037 | 1/AA/580:584, 1/AA/757:761 | tSH-tHW-tHS Not in a motif group | homologous IL_5J7L_027 IL_17136.1 | |
| IL_4V9C_038 | 1/AA/588:590, 1/AA/649:651 | No text annotation Not in a motif group | geometric IL_1Y27_001 IL_51629.2 | |
| IL_4V9C_039 | 1/AA/592:594, 1/AA/645:647 | CA cWW Not in a motif group | geometric IL_1KFO_002 IL_95997.1 | |
| IL_4V9C_040 | 1/AA/594:596, 1/AA/644:645 | Major groove platform Not in a motif group | geometric IL_5J7L_028 IL_27635.1 | |
| IL_4V9C_041 | 1/AA/597:599, 1/AA/639:643 | 8-nt loop receptor Not in a motif group | geometric IL_6CK5_002 IL_93341.1 | |
| IL_4V9C_042 | 1/AA/605:612, 1/AA/628:633 | No text annotation Not in a motif group | homologous IL_5J7L_030 IL_78349.1 | |
| IL_4V9C_043 | 1/AA/614:616, 1/AA/624:626 | No text annotation Not in a motif group | geometric IL_1Y27_001 IL_51629.2 | |
| IL_4V9C_044 | 1/AA/654:655, 1/AA/751:754 | Major groove platform; stack outside cWW Not in a motif group | homologous IL_5J7L_031 IL_50694.2 | |
| IL_4V9C_045 | 1/AA/658:659, 1/AA/746:748 | Single stack bend Not in a motif group | homologous IL_5J7L_032 IL_76488.2 | |
| IL_4V9C_046 | 1/AA/662:666, 1/AA/740:743 | Tandem non-canonical cWW pairs Not in a motif group | homologous IL_5J7L_033 IL_71110.1 | |
| IL_4V9C_047 | 1/AA/684:688, 1/AA/699:706 | Kink-turn Not in a motif group | homologous IL_5J7L_035 IL_45067.2 | |
| IL_4V9C_048 | 1/AA/774:779, 1/AA/803:805 | Other IL Not in a motif group | geometric IL_4V88_435 IL_22046.1 | |
| IL_4V9C_049 | 1/AA/779:783, 1/AA/799:803 | tSH-tHW-tHS Not in a motif group | homologous IL_4LFB_033 IL_17136.1 | |
| IL_4V9C_051 | 1/AA/831:833, 1/AA/853:855 | No text annotation Not in a motif group | geometric IL_3ICQ_003 IL_51629.2 | |
| IL_4V9C_052 | 1/AA/887:895, 1/AA/904:910 | 9x7 Sarcin-Ricin with inserted C; G-bulge Not in a motif group | homologous IL_6CZR_146 IL_68633.1 | |
| IL_4V9C_053 | 1/AA/922:923, 1/AA/1393:1395 | Single bulged A Not in a motif group | homologous IL_4LFB_035 IL_37497.2 | |
| IL_4V9C_054 | 1/AA/925:927, 1/AA/1390:1391 | Single bulged G Not in a motif group | homologous IL_4LFB_036 IL_00225.2 | |
| IL_4V9C_055 | 1/AA/933:935, 1/AA/1380:1384 | Minor groove platform Not in a motif group | homologous IL_5J7L_041 IL_47078.1 | |
| IL_4V9C_056 | 1/AA/941:943, 1/AA/1340:1342 | No text annotation Not in a motif group | geometric IL_1Y27_001 IL_51629.2 | |
| IL_4V9C_057 | 1/AA/950:952, 1/AA/1229:1231 | No text annotation Not in a motif group | geometric IL_5TBW_079 IL_95997.1 | |
| IL_4V9C_058 | 1/AA/953:954, 1/AA/1226:1228 | Minor groove platform Not in a motif group | homologous IL_5J7L_042 IL_42622.2 | |
| IL_4V9C_060 | 1/AA/993:997, 1/AA/1044:1045 | Minor groove platform Not in a motif group | geometric IL_5J7L_043 IL_47078.1 | |
| IL_4V9C_061 | 1/AA/998:1000, 1/AA/1040:1043 | No text annotation Not in a motif group | ||
| IL_4V9C_063 | 1/AA/1003:1010, 1/AA/1019:1037 | No text annotation Not in a motif group | ||
| IL_4V9C_064 | 1/AA/1048:1050, 1/AA/1208:1209 | Single bulged U Not in a motif group | homologous IL_5J7L_046 IL_83039.13 | |
| IL_4V9C_065 | 1/AA/1051:1057, 1/AA/1203:1207 | No text annotation Not in a motif group | ||
| IL_4V9C_066 | 1/AA/1057:1058, 1/AA/1199:1203 | Minor groove platform Not in a motif group | homologous IL_5J7L_048 IL_93353.1 | |
| IL_4V9C_067 | 1/AA/1060:1061, 1/AA/1195:1197 | Single bulged A Not in a motif group | homologous IL_5J7L_049 IL_37497.2 | |
| IL_4V9C_068 | 1/AA/1061:1063, 1/AA/1193:1195 | No text annotation Not in a motif group | geometric IL_5J7L_050 IL_95997.1 | |
| IL_4V9C_069 | 1/AA/1158:1162, 1/AA/1174:1181 | No text annotation Not in a motif group | ||
| IL_4V9C_071 | 1/AA/1241:1243, 1/AA/1294:1296 | No text annotation Not in a motif group | geometric IL_4V88_417 IL_95997.1 | |
| IL_4V9C_072 | 1/AA/1247:1253, 1/AA/1284:1290 | No text annotation Not in a motif group | homologous IL_5J7L_054 IL_09129.1 | |
| IL_4V9C_073 | 1/AA/1255:1258, 1/AA/1277:1282 | No text annotation Not in a motif group | homologous IL_5J7L_055 IL_75461.4 | |
| IL_4V9C_074 | 1/AA/1259:1263, 1/AA/1272:1276 | Triple sheared Not in a motif group | homologous IL_5J7L_056 IL_56467.8 | |
| IL_4V9C_076 | 1/AA/1303:1308, 1/AA/1329:1334 | No text annotation Not in a motif group | geometric IL_5J7L_057 IL_19954.2 | |
| IL_4V9C_079 | 1/AA/1399:1401, 1/AA/1501:1504 | No text annotation Not in a motif group | geometric IL_4V88_463 IL_36143.3 | |
| IL_4V9C_080 | 1/AA/1401:1404, 1/AA/1497:1501 | No text annotation Not in a motif group | geometric IL_4V88_464 IL_99670.1 | |
| IL_4V9C_081 | 1/AA/1405:1407, 1/AA/1494:1496 | UU cWW Not in a motif group | geometric IL_1ZZ5_002 IL_51629.2 | |
| IL_4V9C_082 | 1/AA/1407:1409, 1/AA/1491:1494 | Decoding loop related Not in a motif group | geometric IL_3C3Z_002 IL_64417.1 | |
| IL_4V9C_084 | 1/AA/1412:1414, 1/AA/1486:1488 | No text annotation Not in a motif group | homologous IL_5J7L_061 IL_95997.1 | |
| IL_4V9C_085 | 1/AA/1416:1419, 1/AA/1481:1484 | Double sheared Not in a motif group | homologous IL_5J7L_062 IL_09705.9 | |
| IL_4V9C_086 | 1/AA/1426:1428, 1/AA/1472:1474 | UG cWW Not in a motif group | homologous IL_4LFB_061 IL_95997.1 | |
| IL_4V9C_087 | 1/AA/1430:1435, 1/AA/1466:1470 | Triple sheared related Not in a motif group | homologous IL_5J7L_063 IL_64879.2 | |
| IL_4V9C_088 | 1/AA/1436:1438, 1/AA/1463:1465 | Intercalated cWW Not in a motif group | geometric IL_7A0S_044 IL_82842.2 | |
| IL_4V9C_089 | 1/AA/1440:1443, 1/AA/1459:1461 | Minor groove platform with extra cWW Not in a motif group | geometric IL_4V88_411 IL_46796.1 | |
| IL_4V9C_090 | 1/AA/1445:1448, 1/AA/1455:1457 | No text annotation Not in a motif group | homologous IL_5J7L_065 IL_02284.5 | |
| IL_4V9C_092 | 1/BA/24:30, 1/BA/510:516 | Triple sheared with non-canonical cWW Not in a motif group | homologous IL_5J7L_245 IL_66414.6 | |
| IL_4V9C_093 | 1/BA/36:37, 1/BA/442:444 | Single bulged A Not in a motif group | homologous IL_5J7L_246 IL_37497.2 | |
| IL_4V9C_094 | 1/BA/43:44, 1/BA/434:436 | Minor groove platform Not in a motif group | homologous IL_5J7L_247 IL_42622.2 | |
| IL_4V9C_095 | 1/BA/57:59, 1/BA/68:70 | No text annotation Not in a motif group | geometric IL_4KR9_002 IL_51629.2 | |
| IL_4V9C_096 | 1/BA/76:78, 1/BA/108:110 | No text annotation Not in a motif group | geometric IL_5TBW_110 IL_51629.2 | |
| IL_4V9C_097 | 1/BA/81:85, 1/BA/97:105 | Kink-turn Not in a motif group | homologous IL_7A0S_004 IL_45067.2 | |
| IL_4V9C_099 | 1/BA/183:184, 1/BA/212:214 | Single stack bend Not in a motif group | homologous IL_5J7L_249 IL_76488.2 | |
| IL_4V9C_100 | 1/BA/239:245, 1/BA/253:258 | 7x6 Sarcin-Ricin; G-bulge Not in a motif group | homologous IL_5J7L_251 IL_76042.2 | |
| IL_4V9C_101 | 1/BA/269:271, 1/BA/366:370 | No text annotation Not in a motif group | homologous IL_5J7L_252 IL_47972.1 | |
| IL_4V9C_103 | 1/BA/274:281, 1/BA/359:363 | No text annotation Not in a motif group | ||
| IL_4V9C_104 | 1/BA/293:295, 1/BA/343:347 | No text annotation Not in a motif group | homologous IL_5J7L_254 IL_69440.1 | |
| IL_4V9C_105 | 1/BA/536:539, 1/BA/554:557 | Double sheared Not in a motif group | homologous IL_5J7L_256 IL_09705.9 | |
| IL_4V9C_107 | 1/BA/564:566, 1/BA/575:577 | No text annotation Not in a motif group | homologous IL_5J7L_257 IL_95997.1 | |
| IL_4V9C_108 | 1/BA/606:611, 1/BA/617:622 | No text annotation Not in a motif group | ||
| IL_4V9C_109 | 1/BA/672:674, 1/BA/806:808 | No text annotation Not in a motif group | geometric IL_5J7L_259 IL_95997.1 | |
| IL_4V9C_110 | 1/BA/674:678, 1/BA/799:806 | No text annotation Not in a motif group | homologous IL_7RQB_018 IL_17470.6 | |
| IL_4V9C_111 | 1/BA/697:698, 1/BA/763:765 | Single bulged A Not in a motif group | geometric IL_7RQB_019 IL_37497.2 | |
| IL_4V9C_112 | 1/BA/702:703, 1/BA/728:730 | Single bulged G Not in a motif group | geometric IL_5J7L_262 IL_00225.2 | |
| IL_4V9C_113 | 1/BA/703:707, 1/BA/724:728 | Triple sheared Not in a motif group | homologous IL_5J7L_263 IL_56467.8 | |
| IL_4V9C_114 | 1/BA/709:711, 1/BA/720:722 | No text annotation Not in a motif group | homologous IL_4WF9_025 NA | |
| IL_4V9C_115 | 1/BA/738:740, 1/BA/757:758 | Major groove platform Not in a motif group | homologous IL_5J7L_264 IL_27635.1 | |
| IL_4V9C_116 | 1/BA/775:777, 1/BA/787:791 | Multiple bulged bases Not in a motif group | geometric IL_7RQB_023 IL_90991.6 | |
| IL_4V9C_117 | 1/BA/837:838, 1/BA/940:942 | Single stack bend Not in a motif group | homologous IL_4WF9_028 IL_92001.1 | |
| IL_4V9C_118 | 1/BA/844:847, 1/BA/933:934 | Other IL Not in a motif group | geometric IL_5J7L_267 IL_92001.1 | |
| IL_4V9C_119 | 1/BA/847:848, 1/BA/930:933 | Stack outside cWW Not in a motif group | homologous IL_5J7L_268 IL_37629.1 | |
| IL_4V9C_120 | 1/BA/850:851, 1/BA/926:928 | Single stack bend Not in a motif group | homologous IL_5J7L_269 IL_76488.2 | |
| IL_4V9C_122 | 1/BA/856:862, 1/BA/915:921 | 7x7 Sarcin-Ricin with intercalated A; G-bulge Not in a motif group | homologous IL_5J7L_270 IL_93830.3 | |
| IL_4V9C_123 | 1/BA/862:863, 1/BA/913:915 | Single bulged G Not in a motif group | geometric IL_5J7L_271 IL_00225.2 | |
| IL_4V9C_124 | 1/BA/863:868, 1/BA/909:913 | No text annotation Not in a motif group | geometric IL_5TBW_062 IL_93630.2 | |
| IL_4V9C_125 | 1/BA/870:872, 1/BA/905:907 | No text annotation Not in a motif group | homologous IL_5J7L_273 IL_95997.1 | |
| IL_4V9C_126 | 1/BA/875:879, 1/BA/898:902 | Triple sheared Not in a motif group | geometric IL_5J7L_274 IL_56467.8 | |
| IL_4V9C_127 | 1/BA/879:883, 1/BA/893:898 | No text annotation Not in a motif group | ||
| IL_4V9C_128 | 1/BA/994:996, 1/BA/1159:1160 | Single bulged C Not in a motif group | homologous IL_5J7L_276 IL_61258.12 | |
| IL_4V9C_129 | 1/BA/998:1002, 1/BA/1153:1157 | UAA/GAN Not in a motif group | homologous IL_4WF9_036 IL_89002.2 | |
| IL_4V9C_130 | 1/BA/1004:1011, 1/BA/1150:1151 | SSU/LSU pseudoknot Not in a motif group | geometric IL_5J7L_278 IL_15861.7 | |
| IL_4V9C_131 | 1/BA/1011:1013, 1/BA/1149:1150 | Single bulged U Not in a motif group | homologous IL_5J7L_279 IL_83039.13 | |
| IL_4V9C_133 | 1/BA/1018:1024, 1/BA/1140:1144 | No text annotation Not in a motif group | homologous IL_5J7L_280 IL_57188.3 | |
| IL_4V9C_134 | 1/BA/1024:1030, 1/BA/1124:1140 | No text annotation Not in a motif group | geometric IL_5J7L_281 IL_50715.1 | |
| IL_4V9C_135 | 1/BA/1031:1034, 1/BA/1121:1123 | Isolated non-canonical cWW with bulges Not in a motif group | homologous IL_4WF9_041 IL_82068.2 | |
| IL_4V9C_136 | 1/BA/1038:1041, 1/BA/1114:1117 | Tandem non-canonical cWW pairs Not in a motif group | homologous IL_5J7L_283 IL_30621.2 | |
| IL_4V9C_137 | 1/BA/1043:1051, 1/BA/1108:1112 | No text annotation Not in a motif group | ||
| IL_4V9C_138 | 1/BA/1051:1053, 1/BA/1106:1108 | No text annotation Not in a motif group | geometric IL_4KR9_002 IL_51629.2 | |
| IL_4V9C_139 | 1/BA/1057:1063, 1/BA/1076:1081 | No text annotation Not in a motif group | ||
| IL_4V9C_140 | 1/BA/1168:1170, 1/BA/1179:1181 | No text annotation Not in a motif group | homologous IL_4WF9_043 NA | |
| IL_4V9C_141 | 1/BA/1196:1198, 1/BA/1247:1250 | Isolated cWS basepair Not in a motif group | homologous IL_5J7L_286 IL_52767.2 | |
| IL_4V9C_142 | 1/BA/1202:1207, 1/BA/1239:1243 | tSH-tHH-tHS Not in a motif group | geometric IL_4V9F_056 IL_62654.1 | |
| IL_4V9C_143 | 1/BA/1208:1215, 1/BA/1234:1238 | Kink-turn Not in a motif group | homologous IL_5J7L_288 IL_70923.2 | |
| IL_4V9C_144 | 1/BA/1218:1220, 1/BA/1229:1231 | No text annotation Not in a motif group | geometric IL_4KR9_001 IL_51629.2 | |
| IL_4V9C_145 | 1/BA/1262:1270, 1/BA/2010:2017 | 9x8 Sarcin-Ricin; G-bulge Not in a motif group | geometric IL_4WF9_008 IL_35728.2 | |
| IL_4V9C_146 | 1/BA/1310:1313, 1/BA/1603:1604 | Major groove platform; stack outside cWW Not in a motif group | homologous IL_7RQB_050 IL_50694.2 | |
| IL_4V9C_147 | 1/BA/1319:1323, 1/BA/1331:1333 | C-loop Not in a motif group | homologous IL_5J7L_291 IL_63596.6 | |
| IL_4V9C_148 | 1/BA/1351:1356, 1/BA/1375:1380 | No text annotation Not in a motif group | ||
| IL_4V9C_149 | 1/BA/1357:1361, 1/BA/1370:1374 | tSH-tHW-tHS Not in a motif group | homologous IL_5J7L_293 IL_17136.1 | |
| IL_4V9C_150 | 1/BA/1407:1411, 1/BA/1591:1595 | No text annotation Not in a motif group | geometric IL_5TBW_121 IL_05145.2 | |
| IL_4V9C_152 | 1/BA/1413:1415, 1/BA/1587:1589 | No text annotation Not in a motif group | ||
| IL_4V9C_153 | 1/BA/1415:1417, 1/BA/1581:1587 | No text annotation Not in a motif group | ||
| IL_4V9C_154 | 1/BA/1417:1421, 1/BA/1577:1581 | UAA/GAN Not in a motif group | geometric IL_5J7L_295 IL_89002.2 | |
| IL_4V9C_155 | 1/BA/1421:1423, 1/BA/1575:1577 | No text annotation Not in a motif group | homologous IL_4WF9_055 IL_95997.1 | |
| IL_4V9C_156 | 1/BA/1429:1431, 1/BA/1562:1564 | No text annotation Not in a motif group | geometric IL_6IA2_005 IL_95997.1 | |
| IL_4V9C_157 | 1/BA/1432:1435, 1/BA/1557:1561 | Tandem non-canonical cWW pairs Not in a motif group | homologous IL_5J7L_296 IL_55178.1 | |
| IL_4V9C_158 | 1/BA/1437:1440, 1/BA/1551:1555 | tSH-tHW Not in a motif group | homologous IL_5J7L_297 IL_04059.1 | |
| IL_4V9C_159 | 1/BA/1450:1451, 1/BA/1459:1461 | No text annotation Not in a motif group | ||
| IL_4V9C_160 | 1/BA/1468:1471, 1/BA/1520:1524 | No text annotation Not in a motif group | homologous IL_5J7L_299 IL_68574.2 | |
| IL_4V9C_161 | 1/BA/1472:1474, 1/BA/1517:1519 | No text annotation Not in a motif group | geometric IL_4KR9_001 IL_51629.2 | |
| IL_4V9C_162 | 1/BA/1474:1478, 1/BA/1513:1517 | tSH-tHW-tHS Not in a motif group | homologous IL_5J7L_300 IL_38862.1 | |
| IL_4V9C_163 | 1/BA/1478:1481, 1/BA/1510:1513 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_1D4R_001 IL_30621.2 | |
| IL_4V9C_164 | 1/BA/1481:1483, 1/BA/1506:1510 | No text annotation Not in a motif group | ||
| IL_4V9C_165 | 1/BA/1483:1485, 1/BA/1504:1506 | No text annotation Not in a motif group | geometric IL_3D0U_006 IL_95997.1 | |
| IL_4V9C_166 | 1/BA/1486:1491, 1/BA/1499:1503 | No text annotation Not in a motif group | ||
| IL_4V9C_167 | 1/BA/1526:1529, 1/BA/1542:1546 | UAA/GAN variation Not in a motif group | homologous IL_5J7L_303 IL_07235.1 | |
| IL_4V9C_168 | 1/BA/1529:1531, 1/BA/1540:1542 | No text annotation Not in a motif group | geometric IL_4KR9_001 IL_51629.2 | |
| IL_4V9C_169 | 1/BA/1650:1656, 1/BA/2004:2007 | No text annotation Not in a motif group | ||
| IL_4V9C_170 | 1/BA/1663:1665, 1/BA/1995:1997 | Isolated tWW turn Not in a motif group | homologous IL_5J7L_305 IL_54997.7 | |
| IL_4V9C_171 | 1/BA/1666:1669, 1/BA/1993:1994 | Major groove platform; stack outside cWW Not in a motif group | homologous IL_5J7L_306 IL_50694.2 | |
| IL_4V9C_172 | 1/BA/1669:1674, 1/BA/1990:1993 | Intercalated tWH Not in a motif group | geometric IL_5J7L_307 IL_82842.2 | |
| IL_4V9C_174 | 1/BA/1686:1691, 1/BA/1696:1702 | tSH-tSH-tHH-tHS Not in a motif group | geometric IL_7RQB_068 IL_65969.2 | |
| IL_4V9C_175 | 1/BA/1712:1718, 1/BA/1742:1746 | 6x5 Sarcin-Ricin; G-bulge Not in a motif group | homologous IL_5J7L_309 IL_88269.3 | |
| IL_4V9C_176 | 1/BA/1770:1771, 1/BA/1980:1982 | Single bulged A Not in a motif group | homologous IL_5J7L_312 IL_37497.2 | |
| IL_4V9C_177 | 1/BA/1798:1804, 1/BA/1813:1821 | Kink-turn related Not in a motif group | homologous IL_5J7L_313 IL_17069.3 | |
| IL_4V9C_178 | 1/BA/1837:1840, 1/BA/1902:1903 | Major groove outside cWW, minor groove, intercalation pocket Not in a motif group | homologous IL_5J7L_314 IL_88739.1 | |
| IL_4V9C_179 | 1/BA/1841:1842, 1/BA/1898:1901 | Major groove outside cWW, minor groove, intercalation pocket Not in a motif group | homologous IL_5J7L_315 IL_16396.2 | |
| IL_4V9C_180 | 1/BA/1846:1849, 1/BA/1893:1894 | Major groove minor groove platform; mini C-loop Not in a motif group | homologous IL_5J7L_316 IL_09061.6 | |
| IL_4V9C_181 | 1/BA/1864:1868, 1/BA/1873:1878 | Triple sheared related Not in a motif group | geometric IL_5J7L_063 IL_64879.2 | |
| IL_4V9C_182 | 1/BA/1933:1934, 1/BA/1964:1967 | Multiple bulged bases Not in a motif group | homologous IL_7RQB_076 IL_59677.2 | |
| IL_4V9C_183 | 1/BA/1934:1945, 1/BA/1961:1964 | No text annotation Not in a motif group | geometric IL_4V9F_071 IL_81589.2 | |
| IL_4V9C_184 | 1/BA/2050:2052, 1/BA/2617:2618 | Major groove platform Not in a motif group | homologous IL_5J7L_320 IL_27635.1 | |
| IL_4V9C_185 | 1/BA/2054:2056, 1/BA/2612:2615 | No text annotation Not in a motif group | homologous IL_5J7L_321 IL_54678.5 | |
| IL_4V9C_186 | 1/BA/2067:2069, 1/BA/2442:2443 | Single bulged U Not in a motif group | homologous IL_7A0S_075 IL_83039.13 | |
| IL_4V9C_187 | 1/BA/2070:2071, 1/BA/2438:2441 | Minor groove platform Not in a motif group | homologous IL_5J7L_324 IL_42622.2 | |
| IL_4V9C_188 | 1/BA/2081:2083, 1/BA/2236:2239 | Isolated tHS basepair with bulges Not in a motif group | homologous IL_5J7L_325 IL_38958.7 | |
| IL_4V9C_189 | 1/BA/2085:2087, 1/BA/2232:2234 | No text annotation Not in a motif group | homologous IL_5J7L_326 IL_95997.1 | |
| IL_4V9C_190 | 1/BA/2098:2101, 1/BA/2188:2191 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_6JDV_001 IL_30621.2 | |
| IL_4V9C_191 | 1/BA/2103:2110, 1/BA/2179:2186 | No text annotation Not in a motif group | ||
| IL_4V9C_195 | 1/BA/2138:2140, 1/BA/2151:2153 | No text annotation Not in a motif group | ||
| IL_4V9C_196 | 1/BA/2202:2204, 1/BA/2220:2221 | Single bulged U Not in a motif group | homologous IL_5J7L_331 IL_83039.13 | |
| IL_4V9C_197 | 1/BA/2290:2292, 1/BA/2340:2342 | No text annotation Not in a motif group | geometric IL_6CZR_157 IL_95997.1 | |
| IL_4V9C_198 | 1/BA/2350:2353, 1/BA/2364:2367 | Double sheared Not in a motif group | homologous IL_5J7L_333 IL_09705.9 | |
| IL_4V9C_199 | 1/BA/2401:2403, 1/BA/2414:2415 | No text annotation Not in a motif group | ||
| IL_4V9C_200 | 1/BA/2453:2454, 1/BA/2498:2500 | Single stack bend Not in a motif group | geometric IL_4WF9_089 IL_76488.2 | |
| IL_4V9C_201 | 1/BA/2454:2455, 1/BA/2496:2498 | Major groove platform Not in a motif group | homologous IL_4WF9_090 IL_27635.1 | |
| IL_4V9C_202 | 1/BA/2457:2459, 1/BA/2493:2494 | Major groove platform Not in a motif group | geometric IL_4WF9_091 IL_27635.1 | |
| IL_4V9C_203 | 1/BA/2459:2462, 1/BA/2488:2493 | No text annotation Not in a motif group | ||
| IL_4V9C_204 | 1/BA/2466:2470, 1/BA/2480:2484 | Triple sheared Not in a motif group | homologous IL_5J7L_338 IL_56467.8 | |
| IL_4V9C_205 | 1/BA/2507:2508, 1/BA/2580:2582 | Major groove platform Not in a motif group | homologous IL_4WF9_094 IL_76223.2 | |
| IL_4V9C_206 | 1/BA/2510:2512, 1/BA/2574:2578 | Isolated non-canonical cWW with bulges Not in a motif group | geometric IL_5J7L_340 IL_90933.2 | |
| IL_4V9C_207 | 1/BA/2512:2513, 1/BA/2571:2574 | No text annotation Not in a motif group | homologous IL_5J7L_341 IL_71530.2 | |
| IL_4V9C_208 | 1/BA/2522:2523, 1/BA/2540:2543 | Minor groove platform with intercalation Not in a motif group | homologous IL_7A0S_091 IL_95601.3 | |
| IL_4V9C_209 | 1/BA/2591:2592, 1/BA/2601:2603 | Single bulged A Not in a motif group | homologous IL_5J7L_344 IL_37497.2 | |
| IL_4V9C_210 | 1/BA/2636:2640, 1/BA/2774:2782 | No text annotation Not in a motif group | homologous IL_5J7L_345 IL_04638.1 | |
| IL_4V9C_211 | 1/BA/2646:2648, 1/BA/2672:2674 | No text annotation Not in a motif group | geometric IL_3ICQ_003 IL_51629.2 | |
| IL_4V9C_213 | 1/BA/2652:2658, 1/BA/2663:2668 | Sarcin-Ricin target in LSU H95; G-bulge Not in a motif group | homologous IL_5J7L_346 IL_16458.1 | |
| IL_4V9C_214 | 1/BA/2680:2684, 1/BA/2725:2727 | C-loop Not in a motif group | homologous IL_5J7L_347 IL_63596.6 | |
| IL_4V9C_215 | 1/BA/2687:2691, 1/BA/2718:2722 | No text annotation Not in a motif group | homologous IL_5J7L_348 IL_08296.3 | |
| IL_4V9C_216 | 1/BA/2695:2696, 1/BA/2711:2714 | Multiple bulged bases Not in a motif group | homologous IL_5J7L_349 IL_71530.2 | |
| IL_4V9C_217 | 1/BA/2737:2742, 1/BA/2762:2767 | UAA/GAN with extra cWW Not in a motif group | homologous IL_5J7L_350 IL_49767.5 | |
| IL_4V9C_218 | 1/BA/2794:2796, 1/BA/2799:2802 | Not an internal loop Not in a motif group | geometric IL_5VCI_005 IL_82842.2 | |
| IL_4V9C_219 | 1/BA/2806:2811, 1/BA/2889:2892 | No text annotation Not in a motif group | homologous IL_5J7L_351 IL_49460.2 | |
| IL_4V9C_220 | 1/BA/2838:2839, 1/BA/2878:2880 | Major groove intercalation Not in a motif group | homologous IL_5J7L_352 IL_16396.2 | |
| IL_4V9C_221 | 1/BA/2843:2846, 1/BA/2870:2874 | Multiple bulged bases with non-canonical cWW Not in a motif group | homologous IL_5J7L_353 IL_58764.3 | |
| IL_4V9C_222 | 1/BA/2847:2852, 1/BA/2865:2869 | No text annotation Not in a motif group | homologous IL_5J7L_354 IL_83162.5 | |
| IL_4V9C_224 | 1/BB/17:18, 1/BB/65:67 | Major groove intercalation Not in a motif group | homologous IL_5J7L_355 IL_37497.2 | |
| IL_4V9C_225 | 1/BB/19:22, 1/BB/61:64 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_1JID_002 IL_30621.2 | |
| IL_4V9C_226 | 1/BB/22:28, 1/BB/56:61 | No text annotation Not in a motif group | ||
| IL_4V9C_227 | 1/BB/30:32, 1/BB/50:54 | No text annotation Not in a motif group | homologous IL_4WF9_114 IL_10810.1 | |
| IL_4V9C_228 | 1/BB/70:79, 1/BB/97:106 | No text annotation Not in a motif group | ||
| IL_4V9C_229 | 1/CA/30:32, 1/CA/552:553 | Single bulged G Not in a motif group | homologous IL_5J7L_001 IL_00225.2 | |
| IL_4V9C_230 | 1/CA/44:45, 1/CA/396:398 | Single bulged A Not in a motif group | homologous IL_5J7L_002 IL_37497.2 | |
| IL_4V9C_231 | 1/CA/47:52, 1/CA/359:361 | No text annotation Not in a motif group | homologous IL_5J7L_003 IL_11178.1 | |
| IL_4V9C_232 | 1/CA/54:56, 1/CA/356:357 | Minor groove platform Not in a motif group | homologous IL_5J7L_004 IL_93353.1 | |
| IL_4V9C_233 | 1/CA/63:66, 1/CA/103:104 | Multiple bulged bases Not in a motif group | homologous IL_5J7L_005 IL_76389.1 | |
| IL_4V9C_234 | 1/CA/67:69, 1/CA/99:102 | Minor groove platform with extra cWW Not in a motif group | homologous IL_5J7L_006 IL_65006.1 | |
| IL_4V9C_235 | 1/CA/70:73, 1/CA/97:98 | Minor groove platform Not in a motif group | homologous IL_5J7L_007 IL_15052.1 | |
| IL_4V9C_237 | 1/CA/128:131, 1/CA/231:233 | Isolated non-canonical cWW with bulges Not in a motif group | homologous IL_5J7L_009 IL_82068.2 | |
| IL_4V9C_238 | 1/CA/132:136, 1/CA/227:230 | Minor groove platform related Not in a motif group | homologous IL_5J7L_010 IL_58764.3 | |
| IL_4V9C_240 | 1/CA/147:154, 1/CA/167:175 | No text annotation Not in a motif group | ||
| IL_4V9C_241 | 1/CA/156:158, 1/CA/163:165 | Isolated cWS basepair Not in a motif group | geometric IL_5TBW_047 IL_52767.2 | |
| IL_4V9C_242 | 1/CA/202:206, 1/CA/213:215 | No text annotation Not in a motif group | ||
| IL_4V9C_243 | 1/CA/242:247, 1/CA/277:284 | Kink-turn with non-sequential stacking Not in a motif group | homologous IL_5J7L_014 IL_45067.2 | |
| IL_4V9C_244 | 1/CA/249:252, 1/CA/274:275 | No text annotation Not in a motif group | homologous IL_4LFB_012 IL_48100.2 | |
| IL_4V9C_245 | 1/CA/292:293, 1/CA/304:308 | C-loop Not in a motif group | homologous IL_5J7L_016 IL_37712.2 | |
| IL_4V9C_246 | 1/CA/367:369, 1/CA/392:393 | Single bulged U Not in a motif group | homologous IL_6CZR_126 IL_83039.13 | |
| IL_4V9C_247 | 1/CA/370:375, 1/CA/389:391 | No text annotation Not in a motif group | ||
| IL_4V9C_248 | 1/CA/375:376, 1/CA/387:389 | Single bulged G Not in a motif group | geometric IL_4LFB_016 IL_00225.2 | |
| IL_4V9C_249 | 1/CA/376:379, 1/CA/384:387 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_1JID_002 IL_30621.2 | |
| IL_4V9C_250 | 1/CA/409:416, 1/CA/427:433 | No text annotation Not in a motif group | homologous IL_4LFB_017 IL_28026.1 | |
| IL_4V9C_251 | 1/CA/445:450, 1/CA/483:489 | No text annotation Not in a motif group | ||
| IL_4V9C_252 | 1/CA/450:454, 1/CA/479:483 | No text annotation Not in a motif group | ||
| IL_4V9C_253 | 1/CA/454:455, 1/CA/477:479 | Single stack bend Not in a motif group | geometric IL_4LFB_041 IL_76488.2 | |
| IL_4V9C_254 | 1/CA/455:458, 1/CA/474:477 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_1D4R_001 IL_30621.2 | |
| IL_4V9C_255 | 1/CA/458:460, 1/CA/472:474 | No text annotation Not in a motif group | geometric IL_6E7L_001 IL_95997.1 | |
| IL_4V9C_256 | 1/CA/504:511, 1/CA/540:541 | SSU/LSU pseudoknot Not in a motif group | homologous IL_5J7L_024 IL_15861.7 | |
| IL_4V9C_257 | 1/CA/515:521, 1/CA/528:536 | No text annotation Not in a motif group | geometric IL_4V88_415 IL_55871.1 | |
| IL_4V9C_258 | 1/CA/569:575, 1/CA/880:881 | No text annotation Not in a motif group | homologous IL_4LFB_022 IL_69996.1 | |
| IL_4V9C_260 | 1/CA/580:584, 1/CA/757:761 | tSH-tHW-tHS Not in a motif group | geometric IL_5J7L_027 IL_17136.1 | |
| IL_4V9C_261 | 1/CA/588:590, 1/CA/649:651 | No text annotation Not in a motif group | geometric IL_1Y27_001 IL_51629.2 | |
| IL_4V9C_262 | 1/CA/591:593, 1/CA/646:648 | Isolated cWH basepair Not in a motif group | geometric IL_2H1M_002 IL_51629.2 | |
| IL_4V9C_263 | 1/CA/593:596, 1/CA/644:646 | Major groove platform with extra pair Not in a motif group | geometric IL_5TBW_091 IL_63450.2 | |
| IL_4V9C_264 | 1/CA/597:599, 1/CA/639:643 | No text annotation Not in a motif group | ||
| IL_4V9C_266 | 1/CA/604:612, 1/CA/628:634 | No text annotation Not in a motif group | ||
| IL_4V9C_267 | 1/CA/614:616, 1/CA/624:626 | No text annotation Not in a motif group | geometric IL_1Y27_001 IL_51629.2 | |
| IL_4V9C_268 | 1/CA/658:661, 1/CA/744:748 | No text annotation Not in a motif group | ||
| IL_4V9C_269 | 1/CA/662:667, 1/CA/739:743 | No text annotation Not in a motif group | ||
| IL_4V9C_270 | 1/CA/684:688, 1/CA/699:706 | Kink-turn Not in a motif group | homologous IL_5J7L_035 IL_45067.2 | |
| IL_4V9C_272 | 1/CA/774:779, 1/CA/803:805 | Other IL Not in a motif group | geometric IL_4V88_435 IL_22046.1 | |
| IL_4V9C_273 | 1/CA/779:784, 1/CA/798:803 | tSH-tHW-tHS-cWW Not in a motif group | geometric IL_3LQX_002 IL_76308.4 | |
| IL_4V9C_274 | 1/CA/887:894, 1/CA/905:910 | 8x6 Sarcin-Ricin with inserted Y; G-bulge Not in a motif group | homologous IL_5J7L_038 IL_24606.2 | |
| IL_4V9C_275 | 1/CA/922:923, 1/CA/1393:1395 | Single bulged A Not in a motif group | homologous IL_6CZR_147 IL_37497.2 | |
| IL_4V9C_276 | 1/CA/925:927, 1/CA/1390:1391 | Single bulged G Not in a motif group | homologous IL_4LFB_036 IL_00225.2 | |
| IL_4V9C_277 | 1/CA/933:935, 1/CA/1380:1384 | Minor groove platform Not in a motif group | homologous IL_5J7L_041 IL_47078.1 | |
| IL_4V9C_278 | 1/CA/948:950, 1/CA/1231:1233 | No text annotation Not in a motif group | geometric IL_4V9F_105 IL_95997.1 | |
| IL_4V9C_279 | 1/CA/952:954, 1/CA/1226:1229 | Minor groove platform with extra cWW Not in a motif group | geometric IL_4WF9_003 IL_65006.1 | |
| IL_4V9C_281 | 1/CA/998:999, 1/CA/1041:1043 | Single stack bend Not in a motif group | homologous IL_5J7L_044 IL_76488.2 | |
| IL_4V9C_282 | 1/CA/1002:1006, 1/CA/1023:1038 | No text annotation Not in a motif group | ||
| IL_4V9C_283 | 1/CA/1006:1008, 1/CA/1021:1023 | No text annotation Not in a motif group | geometric IL_4V88_417 IL_95997.1 | |
| IL_4V9C_284 | 1/CA/1009:1012, 1/CA/1017:1020 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_4WF9_109 IL_30621.2 | |
| IL_4V9C_285 | 1/CA/1048:1050, 1/CA/1208:1209 | Single bulged U Not in a motif group | homologous IL_4LFB_042 IL_83039.13 | |
| IL_4V9C_286 | 1/CA/1051:1056, 1/CA/1204:1207 | tSH-tHW Not in a motif group | geometric IL_5UNE_005 IL_21270.1 | |
| IL_4V9C_287 | 1/CA/1057:1058, 1/CA/1199:1203 | Minor groove platform Not in a motif group | homologous IL_5J7L_048 IL_93353.1 | |
| IL_4V9C_288 | 1/CA/1060:1061, 1/CA/1195:1197 | Single bulged A Not in a motif group | geometric IL_5J7L_049 IL_37497.2 | |
| IL_4V9C_289 | 1/CA/1061:1063, 1/CA/1193:1195 | No text annotation Not in a motif group | geometric IL_4LFB_047 IL_95997.1 | |
| IL_4V9C_290 | 1/CA/1113:1115, 1/CA/1185:1187 | No text annotation Not in a motif group | geometric IL_4WF9_042 IL_95997.1 | |
| IL_4V9C_292 | 1/CA/1124:1129, 1/CA/1143:1149 | No text annotation Not in a motif group | ||
| IL_4V9C_293 | 1/CA/1129:1133, 1/CA/1141:1143 | No text annotation Not in a motif group | ||
| IL_4V9C_294 | 1/CA/1158:1165, 1/CA/1171:1181 | No text annotation Not in a motif group | ||
| IL_4V9C_295 | 1/CA/1242:1245, 1/CA/1292:1295 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_4WF9_109 IL_30621.2 | |
| IL_4V9C_296 | 1/CA/1246:1253, 1/CA/1284:1291 | No text annotation Not in a motif group | ||
| IL_4V9C_298 | 1/CA/1255:1258, 1/CA/1277:1282 | No text annotation Not in a motif group | homologous IL_5J7L_055 IL_75461.4 | |
| IL_4V9C_299 | 1/CA/1259:1263, 1/CA/1272:1276 | Triple sheared Not in a motif group | homologous IL_5J7L_056 IL_56467.8 | |
| IL_4V9C_301 | 1/CA/1350:1352, 1/CA/1370:1372 | No text annotation Not in a motif group | geometric IL_1YZ9_001 IL_95997.1 | |
| IL_4V9C_303 | 1/CA/1399:1401, 1/CA/1501:1504 | No text annotation Not in a motif group | homologous IL_5J7L_058 IL_36143.3 | |
| IL_4V9C_304 | 1/CA/1401:1404, 1/CA/1497:1501 | No text annotation Not in a motif group | geometric IL_4V88_464 IL_99670.1 | |
| IL_4V9C_305 | 1/CA/1405:1407, 1/CA/1494:1496 | No text annotation Not in a motif group | geometric IL_5MWI_004 IL_95997.1 | |
| IL_4V9C_306 | 1/CA/1407:1409, 1/CA/1491:1494 | Decoding loop related Not in a motif group | geometric IL_3C3Z_002 IL_64417.1 | |
| IL_4V9C_307 | 1/CA/1412:1414, 1/CA/1486:1488 | No text annotation Not in a motif group | homologous IL_5J7L_061 IL_95997.1 | |
| IL_4V9C_308 | 1/CA/1416:1419, 1/CA/1481:1484 | Double sheared Not in a motif group | homologous IL_5J7L_062 IL_09705.9 | |
| IL_4V9C_309 | 1/CA/1430:1435, 1/CA/1466:1470 | Triple sheared related Not in a motif group | homologous IL_5J7L_063 IL_64879.2 | |
| IL_4V9C_310 | 1/CA/1440:1442, 1/CA/1460:1461 | Minor groove platform Not in a motif group | homologous IL_5J7L_064 IL_42622.2 | |
| IL_4V9C_311 | 1/CA/1445:1448, 1/CA/1455:1457 | No text annotation Not in a motif group | homologous IL_5J7L_065 IL_02284.5 | |
| IL_4V9C_313 | 1/DA/24:30, 1/DA/510:516 | Triple sheared with non-canonical cWW Not in a motif group | homologous IL_5J7L_245 IL_66414.6 | |
| IL_4V9C_314 | 1/DA/36:37, 1/DA/442:444 | Single bulged A Not in a motif group | homologous IL_5J7L_246 IL_37497.2 | |
| IL_4V9C_315 | 1/DA/42:44, 1/DA/434:437 | Minor groove platform with extra cWW Not in a motif group | homologous IL_4WF9_003 IL_65006.1 | |
| IL_4V9C_316 | 1/DA/81:85, 1/DA/97:105 | No text annotation Not in a motif group | homologous IL_5J7L_248 IL_93699.1 | |
| IL_4V9C_317 | 1/DA/183:184, 1/DA/212:214 | Single stack bend Not in a motif group | homologous IL_5J7L_249 IL_76488.2 | |
| IL_4V9C_318 | 1/DA/188:194, 1/DA/201:208 | 8x7 Sarcin-Ricin; G-bulge Not in a motif group | geometric IL_5J7L_250 IL_04346.7 | |
| IL_4V9C_319 | 1/DA/239:245, 1/DA/253:258 | 7x6 Sarcin-Ricin; G-bulge Not in a motif group | homologous IL_5J7L_251 IL_76042.2 | |
| IL_4V9C_320 | 1/DA/269:271, 1/DA/366:370 | No text annotation Not in a motif group | homologous IL_5J7L_252 IL_47972.1 | |
| IL_4V9C_321 | 1/DA/274:281, 1/DA/359:363 | No text annotation Not in a motif group | homologous IL_5J7L_253 IL_77870.1 | |
| IL_4V9C_322 | 1/DA/283:285, 1/DA/355:357 | No text annotation Not in a motif group | geometric IL_1YZ9_001 IL_95997.1 | |
| IL_4V9C_323 | 1/DA/285:287, 1/DA/353:355 | No text annotation Not in a motif group | geometric IL_5TBW_110 IL_51629.2 | |
| IL_4V9C_325 | 1/DA/293:295, 1/DA/343:347 | No text annotation Not in a motif group | homologous IL_5J7L_254 IL_69440.1 | |
| IL_4V9C_326 | 1/DA/481:484, 1/DA/496:509 | No text annotation Not in a motif group | homologous IL_5J7L_255 IL_60992.6 | |
| IL_4V9C_327 | 1/DA/536:539, 1/DA/554:557 | Double sheared Not in a motif group | homologous IL_5J7L_256 IL_09705.9 | |
| IL_4V9C_329 | 1/DA/564:566, 1/DA/575:577 | No text annotation Not in a motif group | geometric IL_5J7L_257 IL_95997.1 | |
| IL_4V9C_331 | 1/DA/606:610, 1/DA/618:622 | AAA cross-strand stack Not in a motif group | homologous IL_5J7L_258 IL_17136.1 | |
| IL_4V9C_332 | 1/DA/672:674, 1/DA/806:808 | No text annotation Not in a motif group | geometric IL_7RQB_017 IL_95997.1 | |
| IL_4V9C_333 | 1/DA/674:678, 1/DA/799:806 | No text annotation Not in a motif group | homologous IL_7RQB_018 IL_17470.6 | |
| IL_4V9C_334 | 1/DA/697:698, 1/DA/763:765 | Single bulged A Not in a motif group | geometric IL_7RQB_019 IL_37497.2 | |
| IL_4V9C_335 | 1/DA/702:703, 1/DA/728:730 | Single bulged G Not in a motif group | geometric IL_5J7L_262 IL_00225.2 | |
| IL_4V9C_336 | 1/DA/703:707, 1/DA/724:728 | Triple sheared Not in a motif group | homologous IL_5J7L_263 IL_56467.8 | |
| IL_4V9C_337 | 1/DA/738:740, 1/DA/757:758 | Major groove platform Not in a motif group | homologous IL_5J7L_264 IL_27635.1 | |
| IL_4V9C_338 | 1/DA/775:777, 1/DA/787:791 | Multiple bulged bases Not in a motif group | geometric IL_5J7L_265 IL_90991.6 | |
| IL_4V9C_339 | 1/DA/837:838, 1/DA/940:942 | Single stack bend Not in a motif group | homologous IL_4WF9_028 IL_92001.1 | |
| IL_4V9C_340 | 1/DA/844:847, 1/DA/933:934 | Other IL Not in a motif group | homologous IL_5J7L_267 IL_92001.1 | |
| IL_4V9C_341 | 1/DA/847:848, 1/DA/930:933 | Stack outside cWW Not in a motif group | geometric IL_5J7L_268 IL_37629.1 | |
| IL_4V9C_342 | 1/DA/850:851, 1/DA/926:928 | Single stack bend Not in a motif group | homologous IL_5J7L_269 IL_76488.2 | |
| IL_4V9C_343 | 1/DA/856:862, 1/DA/915:921 | 7x7 Sarcin-Ricin with intercalated A; G-bulge Not in a motif group | geometric IL_5J7L_270 IL_93830.3 | |
| IL_4V9C_344 | 1/DA/862:863, 1/DA/913:915 | Single bulged G Not in a motif group | homologous IL_5J7L_271 IL_00225.2 | |
| IL_4V9C_345 | 1/DA/864:868, 1/DA/909:912 | C-loop Not in a motif group | homologous IL_5J7L_272 IL_63596.6 | |
| IL_4V9C_346 | 1/DA/870:872, 1/DA/905:907 | No text annotation Not in a motif group | homologous IL_5J7L_273 IL_95997.1 | |
| IL_4V9C_349 | 1/DA/994:996, 1/DA/1159:1160 | Single bulged C Not in a motif group | homologous IL_5J7L_276 IL_61258.12 | |
| IL_4V9C_350 | 1/DA/998:1002, 1/DA/1153:1157 | UAA/GAN Not in a motif group | homologous IL_4WF9_036 IL_89002.2 | |
| IL_4V9C_351 | 1/DA/1004:1011, 1/DA/1150:1151 | SSU/LSU pseudoknot Not in a motif group | homologous IL_5J7L_278 IL_15861.7 | |
| IL_4V9C_352 | 1/DA/1011:1013, 1/DA/1149:1150 | Single bulged U Not in a motif group | geometric IL_5J7L_279 IL_83039.13 | |
| IL_4V9C_353 | 1/DA/1018:1024, 1/DA/1140:1144 | No text annotation Not in a motif group | homologous IL_5J7L_280 IL_57188.3 | |
| IL_4V9C_354 | 1/DA/1024:1030, 1/DA/1124:1140 | No text annotation Not in a motif group | geometric IL_5J7L_281 IL_50715.1 | |
| IL_4V9C_355 | 1/DA/1031:1034, 1/DA/1121:1123 | Isolated non-canonical cWW with bulges Not in a motif group | homologous IL_5J7L_282 IL_82068.2 | |
| IL_4V9C_356 | 1/DA/1038:1041, 1/DA/1114:1117 | Tandem non-canonical cWW pairs Not in a motif group | homologous IL_5J7L_283 IL_30621.2 | |
| IL_4V9C_357 | 1/DA/1043:1051, 1/DA/1108:1112 | Kink-turn Not in a motif group | homologous IL_5J7L_284 IL_90538.4 | |
| IL_4V9C_358 | 1/DA/1055:1090, 1/DA/1101:1104 | No text annotation Not in a motif group | ||
| IL_4V9C_359 | 1/DA/1196:1198, 1/DA/1247:1250 | Isolated cWS basepair Not in a motif group | homologous IL_5J7L_286 IL_52767.2 | |
| IL_4V9C_360 | 1/DA/1202:1206, 1/DA/1240:1243 | No text annotation Not in a motif group | homologous IL_5J7L_287 IL_91920.1 | |
| IL_4V9C_361 | 1/DA/1208:1215, 1/DA/1234:1238 | Kink-turn Not in a motif group | homologous IL_7RQB_047 IL_70923.2 | |
| IL_4V9C_362 | 1/DA/1262:1269, 1/DA/2011:2017 | 8x7 Sarcin-Ricin; G-bulge Not in a motif group | homologous IL_5J7L_289 IL_04346.7 | |
| IL_4V9C_363 | 1/DA/1310:1313, 1/DA/1603:1604 | Major groove platform; stack outside cWW Not in a motif group | homologous IL_4WF9_049 IL_50694.2 | |
| IL_4V9C_364 | 1/DA/1319:1323, 1/DA/1331:1333 | C-loop Not in a motif group | homologous IL_5J7L_291 IL_63596.6 | |
| IL_4V9C_365 | 1/DA/1351:1355, 1/DA/1376:1380 | UAA/GAN Not in a motif group | homologous IL_5J7L_292 IL_89002.2 | |
| IL_4V9C_366 | 1/DA/1355:1357, 1/DA/1374:1376 | No text annotation Not in a motif group | geometric IL_5TBW_079 IL_95997.1 | |
| IL_4V9C_367 | 1/DA/1357:1361, 1/DA/1370:1374 | tSH-tHW-tHS Not in a motif group | geometric IL_5J7L_293 IL_17136.1 | |
| IL_4V9C_368 | 1/DA/1406:1408, 1/DA/1594:1596 | No text annotation Not in a motif group | homologous IL_4WF9_053 NA | |
| IL_4V9C_369 | 1/DA/1413:1416, 1/DA/1582:1589 | No text annotation Not in a motif group | ||
| IL_4V9C_370 | 1/DA/1417:1421, 1/DA/1577:1581 | UAA/GAN Not in a motif group | homologous IL_5J7L_295 IL_89002.2 | |
| IL_4V9C_371 | 1/DA/1432:1435, 1/DA/1557:1561 | Tandem non-canonical cWW pairs Not in a motif group | homologous IL_5J7L_296 IL_55178.1 | |
| IL_4V9C_372 | 1/DA/1437:1440, 1/DA/1551:1555 | tSH-tHW Not in a motif group | homologous IL_5J7L_297 IL_04059.1 | |
| IL_4V9C_373 | 1/DA/1450:1451, 1/DA/1459:1461 | Single bulged U Not in a motif group | geometric IL_5J7L_298 IL_83039.13 | |
| IL_4V9C_374 | 1/DA/1468:1471, 1/DA/1520:1524 | No text annotation Not in a motif group | homologous IL_5J7L_299 IL_68574.2 | |
| IL_4V9C_375 | 1/DA/1474:1478, 1/DA/1513:1517 | tSH-tHW-tHS Not in a motif group | homologous IL_5J7L_300 IL_38862.1 | |
| IL_4V9C_376 | 1/DA/1481:1482, 1/DA/1507:1510 | No text annotation Not in a motif group | geometric IL_5J7L_301 IL_67474.4 | |
| IL_4V9C_377 | 1/DA/1482:1486, 1/DA/1503:1507 | No text annotation Not in a motif group | geometric IL_5TBW_121 IL_05145.2 | |
| IL_4V9C_379 | 1/DA/1488:1491, 1/DA/1499:1501 | No text annotation Not in a motif group | ||
| IL_4V9C_380 | 1/DA/1526:1529, 1/DA/1542:1546 | UAA/GAN variation Not in a motif group | homologous IL_5J7L_303 IL_07235.1 | |
| IL_4V9C_381 | 1/DA/1651:1656, 1/DA/2004:2006 | No text annotation Not in a motif group | homologous IL_5J7L_304 IL_12566.2 | |
| IL_4V9C_382 | 1/DA/1663:1665, 1/DA/1995:1997 | Isolated tWW turn Not in a motif group | homologous IL_5J7L_305 IL_54997.7 | |
| IL_4V9C_383 | 1/DA/1666:1669, 1/DA/1993:1994 | Major groove platform; stack outside cWW Not in a motif group | homologous IL_5J7L_306 IL_50694.2 | |
| IL_4V9C_384 | 1/DA/1669:1674, 1/DA/1990:1993 | Intercalated tWH Not in a motif group | geometric IL_5J7L_307 IL_82842.2 | |
| IL_4V9C_385 | 1/DA/1686:1691, 1/DA/1696:1702 | tSH-tSH-tHH-tHS Not in a motif group | homologous IL_5J7L_308 IL_65969.2 | |
| IL_4V9C_386 | 1/DA/1712:1718, 1/DA/1742:1746 | 6x5 Sarcin-Ricin; G-bulge Not in a motif group | homologous IL_5J7L_309 IL_88269.3 | |
| IL_4V9C_387 | 1/DA/1770:1771, 1/DA/1980:1982 | Single bulged A Not in a motif group | homologous IL_5J7L_312 IL_37497.2 | |
| IL_4V9C_388 | 1/DA/1798:1804, 1/DA/1813:1821 | Kink-turn related Not in a motif group | homologous IL_5J7L_313 IL_17069.3 | |
| IL_4V9C_389 | 1/DA/1837:1840, 1/DA/1902:1903 | Major groove outside cWW, minor groove, intercalation pocket Not in a motif group | homologous IL_5J7L_314 IL_88739.1 | |
| IL_4V9C_390 | 1/DA/1841:1842, 1/DA/1898:1901 | Major groove outside cWW, minor groove, intercalation pocket Not in a motif group | homologous IL_7A0S_067 IL_16396.2 | |
| IL_4V9C_391 | 1/DA/1846:1849, 1/DA/1893:1894 | Major groove minor groove platform; mini C-loop Not in a motif group | homologous IL_5J7L_316 IL_09061.6 | |
| IL_4V9C_392 | 1/DA/1864:1867, 1/DA/1874:1878 | UAA/GAN related Not in a motif group | homologous IL_5J7L_317 IL_77691.1 | |
| IL_4V9C_393 | 1/DA/1933:1934, 1/DA/1964:1967 | Multiple bulged bases Not in a motif group | homologous IL_7RQB_076 IL_59677.2 | |
| IL_4V9C_394 | 1/DA/1934:1945, 1/DA/1961:1964 | No text annotation Not in a motif group | geometric IL_4WF9_077 IL_81589.2 | |
| IL_4V9C_395 | 1/DA/2050:2052, 1/DA/2617:2618 | Major groove platform Not in a motif group | homologous IL_5J7L_320 IL_27635.1 | |
| IL_4V9C_396 | 1/DA/2054:2056, 1/DA/2612:2615 | No text annotation Not in a motif group | ||
| IL_4V9C_397 | 1/DA/2067:2069, 1/DA/2442:2443 | Single bulged U Not in a motif group | homologous IL_7A0S_075 IL_83039.13 | |
| IL_4V9C_398 | 1/DA/2070:2071, 1/DA/2438:2441 | Minor groove platform Not in a motif group | homologous IL_7A0S_076 IL_42622.2 | |
| IL_4V9C_399 | 1/DA/2081:2083, 1/DA/2236:2239 | Isolated tHS basepair with bulges Not in a motif group | homologous IL_5J7L_325 IL_38958.7 | |
| IL_4V9C_400 | 1/DA/2085:2087, 1/DA/2232:2234 | No text annotation Not in a motif group | homologous IL_5J7L_326 IL_95997.1 | |
| IL_4V9C_404 | 1/DA/2202:2204, 1/DA/2220:2221 | Single bulged U Not in a motif group | homologous IL_5J7L_331 IL_83039.13 | |
| IL_4V9C_405 | 1/DA/2350:2353, 1/DA/2364:2367 | Double sheared Not in a motif group | homologous IL_5J7L_333 IL_09705.9 | |
| IL_4V9C_406 | 1/DA/2397:2399, 1/DA/2417:2419 | No text annotation Not in a motif group | geometric IL_5TBW_110 IL_51629.2 | |
| IL_4V9C_407 | 1/DA/2401:2403, 1/DA/2414:2415 | Single bulged U Not in a motif group | geometric IL_5LYS_008 IL_83039.13 | |
| IL_4V9C_408 | 1/DA/2453:2454, 1/DA/2498:2500 | Single stack bend Not in a motif group | geometric IL_4WF9_089 IL_76488.2 | |
| IL_4V9C_409 | 1/DA/2454:2455, 1/DA/2496:2498 | Major groove platform Not in a motif group | homologous IL_7RQB_092 IL_27635.1 | |
| IL_4V9C_410 | 1/DA/2457:2459, 1/DA/2493:2494 | Major groove platform Not in a motif group | homologous IL_4WF9_091 IL_27635.1 | |
| IL_4V9C_411 | 1/DA/2459:2461, 1/DA/2489:2493 | Major groove minor groove platform with extra cWW Not in a motif group | geometric IL_7A0S_086 IL_92788.2 | |
| IL_4V9C_412 | 1/DA/2466:2470, 1/DA/2480:2484 | Triple sheared Not in a motif group | homologous IL_5J7L_338 IL_56467.8 | |
| IL_4V9C_413 | 1/DA/2507:2508, 1/DA/2580:2582 | Major groove platform Not in a motif group | homologous IL_7A0S_088 IL_76223.2 | |
| IL_4V9C_414 | 1/DA/2510:2512, 1/DA/2574:2578 | Isolated non-canonical cWW with bulges Not in a motif group | homologous IL_5J7L_340 IL_90933.2 | |
| IL_4V9C_415 | 1/DA/2512:2513, 1/DA/2571:2574 | No text annotation Not in a motif group | geometric IL_5J7L_341 IL_71530.2 | |
| IL_4V9C_416 | 1/DA/2522:2523, 1/DA/2540:2543 | Minor groove platform with intercalation Not in a motif group | homologous IL_5J7L_342 IL_95601.3 | |
| IL_4V9C_417 | 1/DA/2591:2592, 1/DA/2601:2603 | Single bulged A Not in a motif group | homologous IL_5J7L_344 IL_37497.2 | |
| IL_4V9C_418 | 1/DA/2636:2640, 1/DA/2774:2782 | No text annotation Not in a motif group | homologous IL_5J7L_345 IL_04638.1 | |
| IL_4V9C_419 | 1/DA/2652:2658, 1/DA/2663:2668 | Sarcin-Ricin target in LSU H95; G-bulge Not in a motif group | geometric IL_5J7L_346 IL_16458.1 | |
| IL_4V9C_420 | 1/DA/2680:2684, 1/DA/2725:2727 | C-loop Not in a motif group | homologous IL_5J7L_347 IL_63596.6 | |
| IL_4V9C_421 | 1/DA/2687:2691, 1/DA/2718:2722 | No text annotation Not in a motif group | homologous IL_5J7L_348 IL_08296.3 | |
| IL_4V9C_422 | 1/DA/2695:2696, 1/DA/2711:2714 | Multiple bulged bases Not in a motif group | homologous IL_5J7L_349 IL_71530.2 | |
| IL_4V9C_423 | 1/DA/2737:2742, 1/DA/2762:2767 | UAA/GAN with extra cWW Not in a motif group | homologous IL_5J7L_350 IL_49767.5 | |
| IL_4V9C_425 | 1/DA/2806:2811, 1/DA/2889:2892 | No text annotation Not in a motif group | homologous IL_5J7L_351 IL_49460.2 | |
| IL_4V9C_426 | 1/DA/2838:2839, 1/DA/2878:2880 | Major groove intercalation Not in a motif group | homologous IL_5J7L_352 IL_16396.2 | |
| IL_4V9C_427 | 1/DA/2843:2846, 1/DA/2870:2874 | Multiple bulged bases with non-canonical cWW Not in a motif group | homologous IL_5J7L_353 IL_58764.3 | |
| IL_4V9C_428 | 1/DA/2847:2852, 1/DA/2865:2869 | No text annotation Not in a motif group | homologous IL_5J7L_354 IL_83162.5 | |
| IL_4V9C_429 | 1/DB/17:18, 1/DB/65:67 | Major groove intercalation Not in a motif group | homologous IL_5J7L_355 IL_37497.2 | |
| IL_4V9C_430 | 1/DB/23:28, 1/DB/56:60 | No text annotation Not in a motif group | homologous IL_5J7L_356 IL_18472.2 | |
| IL_4V9C_431 | 1/DB/30:31, 1/DB/51:54 | Major groove minor groove platform; mini C-loop Not in a motif group | homologous IL_5J7L_357 IL_09061.6 | |
| IL_4V9C_432 | 1/DB/34:38, 1/DB/44:48 | Symmetric double minor groove platform Not in a motif group | homologous IL_5J7L_358 IL_58103.6 | |
| IL_4V9C_433 | 1/DB/71:79, 1/DB/97:105 | Bacterial 5S Loop E Not in a motif group | homologous IL_5J7L_359 IL_56455.3 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_4V9C_008 | No text annotation | ||
| IL_4V9C_015 | No text annotation | ||
| IL_4V9C_020 | No text annotation | ||
| IL_4V9C_022 | No text annotation | ||
| IL_4V9C_031 | No text annotation | ||
| IL_4V9C_034 | No text annotation | ||
| IL_4V9C_050 | No text annotation | ||
| IL_4V9C_059 | No text annotation | ||
| IL_4V9C_062 | Tandem non-canonical cWW pairs | ||
| IL_4V9C_070 | No text annotation | ||
| IL_4V9C_075 | Isolated cWH basepair | ||
| IL_4V9C_077 | No text annotation | ||
| IL_4V9C_078 | No text annotation | ||
| IL_4V9C_083 | No text annotation | ||
| IL_4V9C_091 | No text annotation | ||
| IL_4V9C_098 | No text annotation | ||
| IL_4V9C_102 | No text annotation | ||
| IL_4V9C_106 | No text annotation | ||
| IL_4V9C_121 | No text annotation | ||
| IL_4V9C_132 | Isolated cWH basepair | ||
| IL_4V9C_151 | No text annotation | ||
| IL_4V9C_173 | No text annotation | ||
| IL_4V9C_192 | No text annotation | ||
| IL_4V9C_193 | No text annotation | ||
| IL_4V9C_194 | Kink-turn | ||
| IL_4V9C_212 | UG cWW | ||
| IL_4V9C_223 | Tandem non-canonical cWW pairs | ||
| IL_4V9C_236 | No text annotation | ||
| IL_4V9C_239 | Isolated cWH basepair | ||
| IL_4V9C_259 | UU cWW | ||
| IL_4V9C_265 | No text annotation | ||
| IL_4V9C_271 | No text annotation | ||
| IL_4V9C_280 | UU cWW | ||
| IL_4V9C_291 | Tandem non-canonical cWW pairs | ||
| IL_4V9C_297 | No text annotation | ||
| IL_4V9C_300 | No text annotation | ||
| IL_4V9C_302 | No text annotation | ||
| IL_4V9C_312 | No text annotation | ||
| IL_4V9C_324 | No text annotation | ||
| IL_4V9C_328 | No text annotation | ||
| IL_4V9C_330 | No text annotation | ||
| IL_4V9C_347 | Triple sheared | ||
| IL_4V9C_348 | Minor groove platform with extra cWW | ||
| IL_4V9C_378 | No text annotation | ||
| IL_4V9C_401 | No text annotation | ||
| IL_4V9C_402 | No text annotation | ||
| IL_4V9C_403 | No text annotation | ||
| IL_4V9C_424 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J3_4V9C_001 | 1/AA/826:829, 1/AA/857:861, 1/AA/868:874 | No text annotation Not in a motif group | homologous J3_5J7L_004 NA | |
| J3_4V9C_002 | 1/AA/936:939, 1/AA/1344:1350, 1/AA/1372:1379 | No text annotation Not in a motif group | ||
| J3_4V9C_003 | 1/AA/943:946, 1/AA/1235:1237, 1/AA/1337:1340 | No text annotation Not in a motif group | homologous J3_4LFB_003 NA | |
| J3_4V9C_004 | 1/AA/955:962, 1/AA/973:984, 1/AA/1221:1225 | No text annotation Not in a motif group | ||
| J3_4V9C_005 | 1/AA/990:993, 1/AA/1045:1047, 1/AA/1210:1215 | No text annotation Not in a motif group | homologous J3_4LFB_005 NA | |
| J3_4V9C_006 | 1/AA/1063:1068, 1/AA/1107:1113, 1/AA/1187:1193 | No text annotation Not in a motif group | ||
| J3_4V9C_007 | 1/AA/1116:1118, 1/AA/1155:1158, 1/AA/1181:1184 | No text annotation Not in a motif group | homologous J3_5J7L_010 NA | |
| J3_4V9C_008 | 1/AA/1237:1241, 1/AA/1296:1303, 1/AA/1334:1337 | No text annotation Not in a motif group | ||
| J3_4V9C_009 | 1/BA/683:689, 1/BA/773:775, 1/BA/791:794 | No text annotation Not in a motif group | homologous J3_5J7L_038 NA | |
| J3_4V9C_010 | 1/BA/698:700, 1/BA/732:736, 1/BA/760:763 | No text annotation Not in a motif group | homologous J3_5J7L_039 NA | |
| J3_4V9C_011 | 1/BA/1055:1057, 1/BA/1081:1091, 1/BA/1100:1104 | No text annotation Not in a motif group | ||
| J3_4V9C_012 | 1/BA/1298:1303, 1/BA/1625:1627, 1/BA/1639:1642 | No text annotation Not in a motif group | homologous J3_5J7L_041 NA | |
| J3_4V9C_013 | 1/BA/1306:1310, 1/BA/1604:1611, 1/BA/1620:1622 | No text annotation Not in a motif group | ||
| J3_4V9C_014 | 1/BA/2091:2093, 1/BA/2196:2200, 1/BA/2223:2228 | No text annotation Not in a motif group | homologous J3_5J7L_044 NA | |
| J3_4V9C_015 | 1/BA/2295:2300, 1/BA/2316:2323, 1/BA/2332:2337 | No text annotation Not in a motif group | ||
| J3_4V9C_016 | 1/BA/2517:2520, 1/BA/2545:2547, 1/BA/2561:2567 | No text annotation Not in a motif group | ||
| J3_4V9C_017 | 1/BA/2812:2815, 1/BA/2831:2836, 1/BA/2882:2888 | No text annotation Not in a motif group | homologous J3_5J7L_048 NA | |
| J3_4V9C_018 | 1/BB/10:16, 1/BB/68:70, 1/BB/106:110 | No text annotation Not in a motif group | ||
| J3_4V9C_019 | 1/CA/586:588, 1/CA/651:655, 1/CA/751:755 | No text annotation Not in a motif group | ||
| J3_4V9C_020 | 1/CA/826:829, 1/CA/857:861, 1/CA/868:874 | No text annotation Not in a motif group | homologous J3_5J7L_004 NA | |
| J3_4V9C_021 | 1/CA/936:939, 1/CA/1344:1350, 1/CA/1372:1379 | No text annotation Not in a motif group | ||
| J3_4V9C_022 | 1/CA/954:962, 1/CA/973:985, 1/CA/1220:1226 | No text annotation Not in a motif group | ||
| J3_4V9C_023 | 1/CA/990:997, 1/CA/1044:1047, 1/CA/1210:1215 | No text annotation Not in a motif group | ||
| J3_4V9C_024 | 1/CA/1063:1068, 1/CA/1107:1113, 1/CA/1187:1193 | No text annotation Not in a motif group | ||
| J3_4V9C_025 | 1/CA/1073:1075, 1/CA/1082:1087, 1/CA/1098:1102 | No text annotation Not in a motif group | ||
| J3_4V9C_026 | 1/CA/1116:1120, 1/CA/1153:1158, 1/CA/1181:1184 | No text annotation Not in a motif group | ||
| J3_4V9C_027 | 1/DA/683:689, 1/DA/773:775, 1/DA/791:794 | No text annotation Not in a motif group | homologous J3_7RQB_004 NA | |
| J3_4V9C_028 | 1/DA/698:700, 1/DA/732:736, 1/DA/760:763 | No text annotation Not in a motif group | homologous J3_5J7L_039 NA | |
| J3_4V9C_029 | 1/DA/1298:1303, 1/DA/1625:1627, 1/DA/1639:1642 | No text annotation Not in a motif group | homologous J3_5J7L_041 NA | |
| J3_4V9C_030 | 1/DA/1306:1309, 1/DA/1605:1611, 1/DA/1620:1622 | No text annotation Not in a motif group | homologous J3_5J7L_042 NA | |
| J3_4V9C_031 | 1/DA/2091:2093, 1/DA/2196:2200, 1/DA/2223:2228 | No text annotation Not in a motif group | homologous J3_5J7L_044 NA | |
| J3_4V9C_032 | 1/DA/2295:2299, 1/DA/2317:2323, 1/DA/2332:2337 | No text annotation Not in a motif group | ||
| J3_4V9C_033 | 1/DA/2517:2520, 1/DA/2545:2547, 1/DA/2561:2567 | No text annotation Not in a motif group | homologous J3_5J7L_046 NA | |
| J3_4V9C_034 | 1/DA/2812:2815, 1/DA/2831:2836, 1/DA/2882:2888 | No text annotation Not in a motif group | homologous J3_5J7L_048 NA | |
| J3_4V9C_035 | 1/DB/10:16, 1/DB/68:70, 1/DB/106:110 | No text annotation Not in a motif group | homologous J3_5J7L_049 NA |
Problematic loops
No problematic loops
Coloring options: