6V39 Internal, Hairpin and 3-way Junction Loop Motifs
Valid loops
| # | loop id | location | annotation | motif |
|---|---|---|---|---|
| 1 | ➜ | 1/AN1/66:75 | NA | NA |
| 2 | ➜ | 1/AN1/93:104 | NA | NA |
| 3 | ➜ | 1/AN1/130:135 | NA | NA |
| 4 | ➜ | 1/AN1/144:149 | NA | NA |
| 5 | ➜ | 1/AN1/165:175 | NA | NA |
| 6 | ➜ | 1/AN1/201:208 | NA | NA |
| 7 | ➜ | 1/AN1/232:237 | NA | NA |
| 8 | ➜ | 1/AN1/253:259 | NA | NA |
| 9 | ➜ | 1/AN1/307:314 | NA | NA |
| 10 | ➜ | 1/AN1/321:325 | NA | NA |
| 11 | ➜ | 1/AN1/329:337 | NA | NA |
| 12 | ➜ | 1/AN1/381:391 | NA | NA |
| 13 | ➜ | 1/AN1/409:416 | NA | NA |
| 14 | ➜ | 1/AN1/461:466 | NA | NA |
| 15 | ➜ | 1/AN1/486:492 | NA | NA |
| 16 | ➜ | 1/AN1/543:546 | NA | NA |
| 17 | ➜ | 1/AN1/564:573 | NA | NA |
| 18 | ➜ | 1/AN1/609:615 | NA | NA |
| 19 | ➜ | 1/AN1/627:632 | NA | NA |
| 20 | ➜ | 1/AN1/639:645 | NA | NA |
| 21 | ➜ | 1/AN1/710:717 | NA | NA |
| 22 | ➜ | 1/AN1/742:751 | NA | NA |
| 23 | ➜ | 1/AN1/777:783 | NA | NA |
| 24 | ➜ | 1/AN1/824:829 | NA | NA |
| 25 | ➜ | 1/AN1/882:890 | NA | NA |
| 26 | ➜ | 1/AN1/951:960 | NA | NA |
| 27 | ➜ | 1/AN1/975:982 | NA | NA |
| 28 | ➜ | 1/AN1/1060:1073 | NA | NA |
| 29 | ➜ | 1/AN1/1087:1098 | NA | NA |
| 30 | ➜ | 1/AN1/1166:1176 | NA | NA |
| 31 | ➜ | 1/AN1/1217:1222 | NA | NA |
| 32 | ➜ | 1/AN1/1276:1284 | NA | NA |
| 33 | ➜ | 1/AN1/1319:1325 | NA | NA |
| 34 | ➜ | 1/AN1/1358:1363 | NA | NA |
| 35 | ➜ | 1/AN1/1384:1393 | NA | NA |
| 36 | ➜ | 1/AN1/1446:1454 | NA | NA |
| 37 | ➜ | 1/AN1/1487:1493 | NA | NA |
| 38 | ➜ | 1/AN1/1563:1566 | NA | NA |
| 39 | ➜ | 1/AN1/1610:1617 | NA | NA |
| 40 | ➜ | 1/AN1/1628:1634 | NA | NA |
| 41 | ➜ | 1/AN1/1689:1694 | NA | NA |
| 42 | ➜ | 1/AN1/1723:1729 | NA | NA |
| 43 | ➜ | 1/AN1/1748:1752 | NA | NA |
| 44 | ➜ | 1/AN1/1773:1783 | NA | NA |
| 45 | ➜ | 1/AN1/1802:1807 | NA | NA |
| 46 | ➜ | 1/AN1/1864:1869 | NA | NA |
| 47 | ➜ | 1/AN1/1906:1916 | NA | NA |
| 48 | ➜ | 1/AN1/1945:1953 | NA | NA |
| 49 | ➜ | 1/AN1/2023:2032 | NA | NA |
| 50 | ➜ | 1/AN1/2136:2148 | NA | NA |
| 51 | ➜ | 1/AN1/2205:2211 | NA | NA |
| 52 | ➜ | 1/AN1/2244:2252 | NA | NA |
| 53 | ➜ | 1/AN1/2260:2272 | NA | NA |
| 54 | ➜ | 1/AN1/2299:2309 | NA | NA |
| 55 | ➜ | 1/AN1/2320:2327 | NA | NA |
| 56 | ➜ | 1/AN1/2351:2358 | NA | NA |
| 57 | ➜ | 1/AN1/2370:2375 | NA | NA |
| 58 | ➜ | 1/AN1/2400:2409 | NA | NA |
| 59 | ➜ | 1/AN1/2467:2475 | NA | NA |
| 60 | ➜ | 1/AN1/2524:2531 | NA | NA |
| 61 | ➜ | 1/AN1/2547:2553 | NA | NA |
| 62 | ➜ | 1/AN1/2590:2595 | NA | NA |
| 63 | ➜ | 1/AN1/2654:2659 | NA | NA |
| 64 | ➜ | 1/AN1/2697:2702 | NA | NA |
| 65 | ➜ | 1/AN1/2741:2755 | NA | NA |
| 66 | ➜ | 1/AN1/2792:2795 | NA | NA |
| 67 | ➜ | 1/AN1/2815:2823 | NA | NA |
| 68 | ➜ | 1/AN1/2852:2857 | NA | NA |
| 69 | ➜ | 1/B/36:42 | NA | NA |
| 70 | ➜ | 1/B/83:88 | NA | NA |
| 71 | ➜ | 1/sN1/14:24 | NA | NA |
| 72 | ➜ | 1/sN1/73:94 | NA | NA |
| 73 | ➜ | 1/sN1/154:159 | NA | NA |
| 74 | ➜ | 1/sN1/182:187 | NA | NA |
| 75 | ➜ | 1/sN1/202:208 | NA | NA |
| 76 | ➜ | 1/sN1/255:263 | NA | NA |
| 77 | ➜ | 1/sN1/292:297 | NA | NA |
| 78 | ➜ | 1/sN1/316:329 | NA | NA |
| 79 | ➜ | 1/sN1/338:343 | NA | NA |
| 80 | ➜ | 1/sN1/375:380 | NA | NA |
| 81 | ➜ | 1/sN1/415:420 | NA | NA |
| 82 | ➜ | 1/sN1/458:466 | NA | NA |
| 83 | ➜ | 1/sN1/518:525 | NA | NA |
| 84 | ➜ | 1/sN1/614:620 | NA | NA |
| 85 | ➜ | 1/sN1/686:695 | NA | NA |
| 86 | ➜ | 1/sN1/723:728 | NA | NA |
| 87 | ➜ | 1/sN1/783:793 | NA | NA |
| 88 | ➜ | 1/sN1/837:843 | NA | NA |
| 89 | ➜ | 1/sN1/859:864 | NA | NA |
| 90 | ➜ | 1/sN1/894:899 | NA | NA |
| 91 | ➜ | 1/sN1/960:969 | NA | NA |
| 92 | ➜ | 1/sN1/1009:1014 | NA | NA |
| 93 | ➜ | 1/sN1/1025:1030 | NA | NA |
| 94 | ➜ | 1/sN1/1073:1078 | NA | NA |
| 95 | ➜ | 1/sN1/1086:1093 | NA | NA |
| 96 | ➜ | 1/sN1/1130:1138 | NA | NA |
| 97 | ➜ | 1/sN1/1161:1169 | NA | NA |
| 98 | ➜ | 1/sN1/1262:1267 | NA | NA |
| 99 | ➜ | 1/sN1/1311:1320 | NA | NA |
| 100 | ➜ | 1/sN1/1353:1363 | NA | NA |
| 101 | ➜ | 1/sN1/1445:1452 | NA | NA |
| 102 | ➜ | 1/sN1/1512:1517 | NA | NA |
| 103 | ➜ | 1/v/13:23 | NA | NA |
| 104 | ➜ | 1/v/32:40 | NA | NA |
| 105 | ➜ | 1/v/54:62 | NA | NA |
Problematic loops
No problematic loops
Valid loops
| # | loop id | location | annotation | motif |
|---|---|---|---|---|
| 1 | ➜ | 1/AN1/31:37,1/AN1/509:515 | NA | NA |
| 2 | ➜ | 1/AN1/43:44,1/AN1/441:443 | NA | NA |
| 3 | ➜ | 1/AN1/50:51,1/AN1/433:435 | NA | NA |
| 4 | ➜ | 1/AN1/88:92,1/AN1/105:112 | NA | NA |
| 5 | ➜ | 1/AN1/190:191,1/AN1/219:221 | NA | NA |
| 6 | ➜ | 1/AN1/195:201,1/AN1/208:215 | NA | NA |
| 7 | ➜ | 1/AN1/246:252,1/AN1/260:265 | NA | NA |
| 8 | ➜ | 1/AN1/276:282,1/AN1/362:369 | NA | NA |
| 9 | ➜ | 1/AN1/295:297,1/AN1/345:349 | NA | NA |
| 10 | ➜ | 1/AN1/305:307,1/AN1/314:316 | NA | NA |
| 11 | ➜ | 1/AN1/480:483,1/AN1/495:508 | NA | NA |
| 12 | ➜ | 1/AN1/535:538,1/AN1/552:555 | NA | NA |
| 13 | ➜ | 1/AN1/542:543,1/AN1/546:548 | NA | NA |
| 14 | ➜ | 1/AN1/562:564,1/AN1/573:575 | NA | NA |
| 15 | ➜ | 1/AN1/604:608,1/AN1/616:620 | NA | NA |
| 16 | ➜ | 1/AN1/670:672,1/AN1/804:806 | NA | NA |
| 17 | ➜ | 1/AN1/672:676,1/AN1/797:804 | NA | NA |
| 18 | ➜ | 1/AN1/695:696,1/AN1/761:763 | NA | NA |
| 19 | ➜ | 1/AN1/700:701,1/AN1/726:728 | NA | NA |
| 20 | ➜ | 1/AN1/701:705,1/AN1/722:726 | NA | NA |
| 21 | ➜ | 1/AN1/736:738,1/AN1/755:756 | NA | NA |
| 22 | ➜ | 1/AN1/740:742,1/AN1/751:753 | NA | NA |
| 23 | ➜ | 1/AN1/773:775,1/AN1/785:789 | NA | NA |
| 24 | ➜ | 1/AN1/835:836,1/AN1/937:939 | NA | NA |
| 25 | ➜ | 1/AN1/841:845,1/AN1/930:932 | NA | NA |
| 26 | ➜ | 1/AN1/845:846,1/AN1/928:930 | NA | NA |
| 27 | ➜ | 1/AN1/848:849,1/AN1/924:926 | NA | NA |
| 28 | ➜ | 1/AN1/854:860,1/AN1/913:919 | NA | NA |
| 29 | ➜ | 1/AN1/860:861,1/AN1/911:913 | NA | NA |
| 30 | ➜ | 1/AN1/862:867,1/AN1/906:910 | NA | NA |
| 31 | ➜ | 1/AN1/868:870,1/AN1/903:905 | NA | NA |
| 32 | ➜ | 1/AN1/873:877,1/AN1/896:900 | NA | NA |
| 33 | ➜ | 1/AN1/878:881,1/AN1/891:895 | NA | NA |
| 34 | ➜ | 1/AN1/991:993,1/AN1/1157:1158 | NA | NA |
| 35 | ➜ | 1/AN1/995:999,1/AN1/1151:1155 | NA | NA |
| 36 | ➜ | 1/AN1/1001:1008,1/AN1/1148:1149 | NA | NA |
| 37 | ➜ | 1/AN1/1008:1010,1/AN1/1147:1148 | NA | NA |
| 38 | ➜ | 1/AN1/1015:1021,1/AN1/1137:1142 | NA | NA |
| 39 | ➜ | 1/AN1/1021:1027,1/AN1/1121:1137 | NA | NA |
| 40 | ➜ | 1/AN1/1028:1031,1/AN1/1118:1120 | NA | NA |
| 41 | ➜ | 1/AN1/1035:1038,1/AN1/1111:1114 | NA | NA |
| 42 | ➜ | 1/AN1/1038:1048,1/AN1/1105:1111 | NA | NA |
| 43 | ➜ | 1/AN1/1054:1056,1/AN1/1077:1078 | NA | NA |
| 44 | ➜ | 1/AN1/1056:1060,1/AN1/1073:1077 | NA | NA |
| 45 | ➜ | 1/AN1/1191:1193,1/AN1/1242:1245 | NA | NA |
| 46 | ➜ | 1/AN1/1197:1201,1/AN1/1235:1238 | NA | NA |
| 47 | ➜ | 1/AN1/1203:1210,1/AN1/1229:1233 | NA | NA |
| 48 | ➜ | 1/AN1/1257:1264,1/AN1/2007:2013 | NA | NA |
| 49 | ➜ | 1/AN1/1305:1308,1/AN1/1601:1602 | NA | NA |
| 50 | ➜ | 1/AN1/1314:1318,1/AN1/1326:1328 | NA | NA |
| 51 | ➜ | 1/AN1/1346:1350,1/AN1/1371:1375 | NA | NA |
| 52 | ➜ | 1/AN1/1352:1356,1/AN1/1365:1369 | NA | NA |
| 53 | ➜ | 1/AN1/1409:1411,1/AN1/1580:1586 | NA | NA |
| 54 | ➜ | 1/AN1/1412:1416,1/AN1/1575:1579 | NA | NA |
| 55 | ➜ | 1/AN1/1427:1430,1/AN1/1555:1559 | NA | NA |
| 56 | ➜ | 1/AN1/1432:1435,1/AN1/1549:1553 | NA | NA |
| 57 | ➜ | 1/AN1/1445:1446,1/AN1/1454:1456 | NA | NA |
| 58 | ➜ | 1/AN1/1468:1473,1/AN1/1509:1514 | NA | NA |
| 59 | ➜ | 1/AN1/1476:1479,1/AN1/1500:1506 | NA | NA |
| 60 | ➜ | 1/AN1/1484:1486,1/AN1/1494:1495 | NA | NA |
| 61 | ➜ | 1/AN1/1649:1654,1/AN1/2000:2002 | NA | NA |
| 62 | ➜ | 1/AN1/1661:1663,1/AN1/1991:1993 | NA | NA |
| 63 | ➜ | 1/AN1/1664:1667,1/AN1/1989:1990 | NA | NA |
| 64 | ➜ | 1/AN1/1667:1672,1/AN1/1986:1989 | NA | NA |
| 65 | ➜ | 1/AN1/1684:1689,1/AN1/1694:1700 | NA | NA |
| 66 | ➜ | 1/AN1/1716:1720,1/AN1/1732:1736 | NA | NA |
| 67 | ➜ | 1/AN1/1766:1767,1/AN1/1976:1978 | NA | NA |
| 68 | ➜ | 1/AN1/1794:1800,1/AN1/1809:1817 | NA | NA |
| 69 | ➜ | 1/AN1/1833:1836,1/AN1/1898:1899 | NA | NA |
| 70 | ➜ | 1/AN1/1837:1838,1/AN1/1894:1897 | NA | NA |
| 71 | ➜ | 1/AN1/1842:1845,1/AN1/1889:1890 | NA | NA |
| 72 | ➜ | 1/AN1/1860:1863,1/AN1/1870:1874 | NA | NA |
| 73 | ➜ | 1/AN1/1929:1930,1/AN1/1960:1963 | NA | NA |
| 74 | ➜ | 1/AN1/1930:1941,1/AN1/1957:1960 | NA | NA |
| 75 | ➜ | 1/AN1/2045:2048,1/AN1/2613:2615 | NA | NA |
| 76 | ➜ | 1/AN1/2050:2052,1/AN1/2608:2611 | NA | NA |
| 77 | ➜ | 1/AN1/2060:2062,1/AN1/2440:2442 | NA | NA |
| 78 | ➜ | 1/AN1/2062:2066,1/AN1/2437:2440 | NA | NA |
| 79 | ➜ | 1/AN1/2066:2067,1/AN1/2434:2437 | NA | NA |
| 80 | ➜ | 1/AN1/2077:2079,1/AN1/2232:2235 | NA | NA |
| 81 | ➜ | 1/AN1/2081:2083,1/AN1/2228:2230 | NA | NA |
| 82 | ➜ | 1/AN1/2098:2101,1/AN1/2181:2183 | NA | NA |
| 83 | ➜ | 1/AN1/2101:2102,1/AN1/2179:2181 | NA | NA |
| 84 | ➜ | 1/AN1/2104:2106,1/AN1/2175:2177 | NA | NA |
| 85 | ➜ | 1/AN1/2106:2112,1/AN1/2161:2175 | NA | NA |
| 86 | ➜ | 1/AN1/2112:2133,1/AN1/2150:2161 | NA | NA |
| 87 | ➜ | 1/AN1/2133:2136,1/AN1/2148:2150 | NA | NA |
| 88 | ➜ | 1/AN1/2198:2200,1/AN1/2216:2217 | NA | NA |
| 89 | ➜ | 1/AN1/2346:2349,1/AN1/2360:2363 | NA | NA |
| 90 | ➜ | 1/AN1/2397:2399,1/AN1/2410:2411 | NA | NA |
| 91 | ➜ | 1/AN1/2452:2455,1/AN1/2489:2491 | NA | NA |
| 92 | ➜ | 1/AN1/2455:2457,1/AN1/2485:2489 | NA | NA |
| 93 | ➜ | 1/AN1/2462:2466,1/AN1/2476:2480 | NA | NA |
| 94 | ➜ | 1/AN1/2503:2505,1/AN1/2575:2578 | NA | NA |
| 95 | ➜ | 1/AN1/2506:2508,1/AN1/2570:2574 | NA | NA |
| 96 | ➜ | 1/AN1/2508:2509,1/AN1/2567:2570 | NA | NA |
| 97 | ➜ | 1/AN1/2518:2519,1/AN1/2536:2539 | NA | NA |
| 98 | ➜ | 1/AN1/2584:2586,1/AN1/2600:2602 | NA | NA |
| 99 | ➜ | 1/AN1/2587:2588,1/AN1/2597:2599 | NA | NA |
| 100 | ➜ | 1/AN1/2632:2636,1/AN1/2770:2778 | NA | NA |
| 101 | ➜ | 1/AN1/2647:2654,1/AN1/2659:2665 | NA | NA |
| 102 | ➜ | 1/AN1/2676:2680,1/AN1/2721:2723 | NA | NA |
| 103 | ➜ | 1/AN1/2683:2687,1/AN1/2714:2718 | NA | NA |
| 104 | ➜ | 1/AN1/2691:2692,1/AN1/2707:2710 | NA | NA |
| 105 | ➜ | 1/AN1/2733:2738,1/AN1/2758:2763 | NA | NA |
| 106 | ➜ | 1/AN1/2791:2792,1/AN1/2795:2797 | NA | NA |
| 107 | ➜ | 1/AN1/2802:2807,1/AN1/2885:2888 | NA | NA |
| 108 | ➜ | 1/AN1/2834:2835,1/AN1/2874:2876 | NA | NA |
| 109 | ➜ | 1/AN1/2839:2842,1/AN1/2866:2870 | NA | NA |
| 110 | ➜ | 1/AN1/2843:2848,1/AN1/2861:2865 | NA | NA |
| 111 | ➜ | 1/B/15:16,1/B/63:65 | NA | NA |
| 112 | ➜ | 1/B/20:26,1/B/54:59 | NA | NA |
| 113 | ➜ | 1/B/28:36,1/B/42:52 | NA | NA |
| 114 | ➜ | 1/sN1/32:34,1/sN1/549:550 | NA | NA |
| 115 | ➜ | 1/sN1/46:47,1/sN1/392:394 | NA | NA |
| 116 | ➜ | 1/sN1/49:54,1/sN1/355:357 | NA | NA |
| 117 | ➜ | 1/sN1/56:58,1/sN1/352:353 | NA | NA |
| 118 | ➜ | 1/sN1/65:68,1/sN1/99:100 | NA | NA |
| 119 | ➜ | 1/sN1/69:71,1/sN1/96:98 | NA | NA |
| 120 | ➜ | 1/sN1/124:127,1/sN1/227:229 | NA | NA |
| 121 | ➜ | 1/sN1/128:132,1/sN1/223:226 | NA | NA |
| 122 | ➜ | 1/sN1/140:142,1/sN1/172:174 | NA | NA |
| 123 | ➜ | 1/sN1/143:150,1/sN1/163:171 | NA | NA |
| 124 | ➜ | 1/sN1/199:202,1/sN1/208:210 | NA | NA |
| 125 | ➜ | 1/sN1/238:243,1/sN1/273:280 | NA | NA |
| 126 | ➜ | 1/sN1/245:248,1/sN1/270:271 | NA | NA |
| 127 | ➜ | 1/sN1/288:289,1/sN1/300:304 | NA | NA |
| 128 | ➜ | 1/sN1/363:365,1/sN1/388:389 | NA | NA |
| 129 | ➜ | 1/sN1/367:371,1/sN1/385:386 | NA | NA |
| 130 | ➜ | 1/sN1/371:372,1/sN1/383:385 | NA | NA |
| 131 | ➜ | 1/sN1/405:412,1/sN1/423:429 | NA | NA |
| 132 | ➜ | 1/sN1/436:438,1/sN1/489:494 | NA | NA |
| 133 | ➜ | 1/sN1/442:446,1/sN1/480:485 | NA | NA |
| 134 | ➜ | 1/sN1/446:449,1/sN1/476:480 | NA | NA |
| 135 | ➜ | 1/sN1/452:453,1/sN1/471:473 | NA | NA |
| 136 | ➜ | 1/sN1/501:508,1/sN1/537:538 | NA | NA |
| 137 | ➜ | 1/sN1/512:518,1/sN1/525:533 | NA | NA |
| 138 | ➜ | 1/sN1/566:572,1/sN1/877:878 | NA | NA |
| 139 | ➜ | 1/sN1/577:581,1/sN1/754:758 | NA | NA |
| 140 | ➜ | 1/sN1/591:593,1/sN1/641:642 | NA | NA |
| 141 | ➜ | 1/sN1/594:595,1/sN1/637:640 | NA | NA |
| 142 | ➜ | 1/sN1/602:609,1/sN1/625:630 | NA | NA |
| 143 | ➜ | 1/sN1/651:652,1/sN1/748:751 | NA | NA |
| 144 | ➜ | 1/sN1/656:658,1/sN1/741:744 | NA | NA |
| 145 | ➜ | 1/sN1/659:663,1/sN1/737:740 | NA | NA |
| 146 | ➜ | 1/sN1/670:675,1/sN1/709:714 | NA | NA |
| 147 | ➜ | 1/sN1/680:685,1/sN1/696:704 | NA | NA |
| 148 | ➜ | 1/sN1/771:775,1/sN1/801:802 | NA | NA |
| 149 | ➜ | 1/sN1/776:780,1/sN1/796:800 | NA | NA |
| 150 | ➜ | 1/sN1/884:891,1/sN1/902:907 | NA | NA |
| 151 | ➜ | 1/sN1/919:920,1/sN1/1390:1392 | NA | NA |
| 152 | ➜ | 1/sN1/922:924,1/sN1/1387:1388 | NA | NA |
| 153 | ➜ | 1/sN1/930:932,1/sN1/1377:1381 | NA | NA |
| 154 | ➜ | 1/sN1/950:951,1/sN1/1223:1225 | NA | NA |
| 155 | ➜ | 1/sN1/990:995,1/sN1/1040:1042 | NA | NA |
| 156 | ➜ | 1/sN1/995:997,1/sN1/1037:1040 | NA | NA |
| 157 | ➜ | 1/sN1/1006:1007,1/sN1/1015:1017 | NA | NA |
| 158 | ➜ | 1/sN1/1007:1009,1/sN1/1014:1015 | NA | NA |
| 159 | ➜ | 1/sN1/1045:1047,1/sN1/1205:1206 | NA | NA |
| 160 | ➜ | 1/sN1/1047:1053,1/sN1/1201:1205 | NA | NA |
| 161 | ➜ | 1/sN1/1054:1055,1/sN1/1196:1200 | NA | NA |
| 162 | ➜ | 1/sN1/1057:1058,1/sN1/1192:1194 | NA | NA |
| 163 | ➜ | 1/sN1/1058:1060,1/sN1/1190:1192 | NA | NA |
| 164 | ➜ | 1/sN1/1083:1085,1/sN1/1095:1096 | NA | NA |
| 165 | ➜ | 1/sN1/1085:1086,1/sN1/1093:1095 | NA | NA |
| 166 | ➜ | 1/sN1/1119:1125,1/sN1/1141:1148 | NA | NA |
| 167 | ➜ | 1/sN1/1126:1129,1/sN1/1139:1140 | NA | NA |
| 168 | ➜ | 1/sN1/1155:1158,1/sN1/1172:1178 | NA | NA |
| 169 | ➜ | 1/sN1/1244:1250,1/sN1/1281:1287 | NA | NA |
| 170 | ➜ | 1/sN1/1252:1255,1/sN1/1274:1279 | NA | NA |
| 171 | ➜ | 1/sN1/1256:1259,1/sN1/1270:1273 | NA | NA |
| 172 | ➜ | 1/sN1/1300:1305,1/sN1/1326:1331 | NA | NA |
| 173 | ➜ | 1/sN1/1396:1398,1/sN1/1498:1501 | NA | NA |
| 174 | ➜ | 1/sN1/1398:1401,1/sN1/1494:1498 | NA | NA |
| 175 | ➜ | 1/sN1/1402:1404,1/sN1/1491:1493 | NA | NA |
| 176 | ➜ | 1/sN1/1404:1406,1/sN1/1488:1491 | NA | NA |
| 177 | ➜ | 1/sN1/1409:1411,1/sN1/1483:1485 | NA | NA |
| 178 | ➜ | 1/sN1/1413:1416,1/sN1/1478:1481 | NA | NA |
| 179 | ➜ | 1/sN1/1418:1420,1/sN1/1474:1476 | NA | NA |
| 180 | ➜ | 1/sN1/1424:1426,1/sN1/1468:1470 | NA | NA |
| 181 | ➜ | 1/sN1/1426:1432,1/sN1/1463:1468 | NA | NA |
| 182 | ➜ | 1/sN1/1436:1439,1/sN1/1457:1459 | NA | NA |
| 183 | ➜ | 1/sN1/1442:1445,1/sN1/1452:1454 | NA | NA |
| 184 | ➜ | 1/v/12:13,1/v/23:25 | NA | NA |
| 185 | ➜ | 1/v/51:53,1/v/63:65 | NA | NA |
Problematic loops
No problematic loops
Valid loops
| # | loop id | location | annotation | motif |
|---|---|---|---|---|
| 1 | ➜ | 1/AN1/37:38,1/AN1/473:480,1/AN1/508:509 | NA | NA |
| 2 | ➜ | 1/AN1/63:64,1/AN1/77:83,1/AN1/117:121 | NA | NA |
| 3 | ➜ | 1/AN1/681:687,1/AN1/771:773,1/AN1/789:792 | NA | NA |
| 4 | ➜ | 1/AN1/696:698,1/AN1/730:734,1/AN1/758:761 | NA | NA |
| 5 | ➜ | 1/AN1/1051:1054,1/AN1/1078:1087,1/AN1/1098:1102 | NA | NA |
| 6 | ➜ | 1/AN1/1293:1298,1/AN1/1623:1625,1/AN1/1637:1640 | NA | NA |
| 7 | ➜ | 1/AN1/1301:1304,1/AN1/1603:1609,1/AN1/1618:1620 | NA | NA |
| 8 | ➜ | 1/AN1/1339:1344,1/AN1/1377:1380,1/AN1/1397:1398 | NA | NA |
| 9 | ➜ | 1/AN1/2087:2089,1/AN1/2192:2196,1/AN1/2219:2224 | NA | NA |
| 10 | ➜ | 1/AN1/2278:2280,1/AN1/2380:2392,1/AN1/2416:2423 | NA | NA |
| 11 | ➜ | 1/AN1/2291:2295,1/AN1/2313:2319,1/AN1/2328:2333 | NA | NA |
| 12 | ➜ | 1/AN1/2513:2516,1/AN1/2541:2543,1/AN1/2557:2563 | NA | NA |
| 13 | ➜ | 1/AN1/2785:2788,1/AN1/2800:2802,1/AN1/2888:2890 | NA | NA |
| 14 | ➜ | 1/AN1/2810:2811,1/AN1/2827:2832,1/AN1/2878:2882 | NA | NA |
| 15 | ➜ | 1/B/8:14,1/B/66:67,1/B/104:107 | NA | NA |
| 16 | ➜ | 1/sN1/48:49,1/sN1/357:363,1/sN1/389:391 | NA | NA |
| 17 | ➜ | 1/sN1/583:585,1/sN1/648:651,1/sN1/751:752 | NA | NA |
| 18 | ➜ | 1/sN1/669:670,1/sN1/714:722,1/sN1/729:731 | NA | NA |
| 19 | ➜ | 1/sN1/823:826,1/sN1/854:858,1/sN1/865:871 | NA | NA |
| 20 | ➜ | 1/sN1/940:943,1/sN1/1232:1234,1/sN1/1334:1337 | NA | NA |
| 21 | ➜ | 1/sN1/952:959,1/sN1/970:981,1/sN1/1218:1222 | NA | NA |
| 22 | ➜ | 1/sN1/987:990,1/sN1/1042:1044,1/sN1/1207:1212 | NA | NA |
| 23 | ➜ | 1/sN1/1060:1065,1/sN1/1104:1110,1/sN1/1184:1190 | NA | NA |
| 24 | ➜ | 1/sN1/1070:1071,1/sN1/1080:1083,1/sN1/1096:1099 | NA | NA |
| 25 | ➜ | 1/sN1/1112:1115,1/sN1/1152:1155,1/sN1/1178:1182 | NA | NA |
| 26 | ➜ | 1/sN1/1234:1238,1/sN1/1293:1300,1/sN1/1331:1334 | NA | NA |
Problematic loops
No problematic loops
Coloring options: