Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
HL_4WT1_0011/13/12:22No text annotation
Not in a motif group
homologous
HL_4LFB_001
HL_89881.2
HL_4WT1_0031/13/157:164No text annotation
Not in a motif group
HL_4WT1_0041/13/186F:191ANo text annotation
Not in a motif group
homologous
HL_6CZR_075
HL_10278.1
HL_4WT1_0051/13/200:217No text annotation
Not in a motif group
homologous
HL_6CZR_076
HL_34168.2
HL_4WT1_0061/13/259:267No text annotation
Not in a motif group
homologous
HL_4LFB_006
HL_69023.2
HL_4WT1_0071/13/296:301GNRA
Not in a motif group
homologous
HL_4LFB_007
HL_42097.2
HL_4WT1_0081/13/320:333No text annotation
Not in a motif group
homologous
HL_4LFB_008
HL_81205.2
HL_4WT1_0091/13/342:347No text annotation
Not in a motif group
homologous
HL_6CZR_080
HL_03562.2
HL_4WT1_0101/13/379:384GNRA
Not in a motif group
homologous
HL_5J7L_010
HL_42097.2
HL_4WT1_0111/13/419:424UNCG
Not in a motif group
homologous
HL_4LFB_011
HL_03562.2
HL_4WT1_0121/13/458:474No text annotation
Not in a motif group
homologous
HL_4LFB_012
HL_43656.2
HL_4WT1_0131/13/522:527No text annotation
Not in a motif group
geometric
HL_5J7L_143
HL_75407.1
HL_4WT1_0141/13/617:623No text annotation
Not in a motif group
homologous
HL_4LFB_014
HL_26881.1
HL_4WT1_0151/13/689:698No text annotation
Not in a motif group
homologous
HL_4LFB_015
HL_12326.1
HL_4WT1_0161/13/726:731Other HL
Not in a motif group
homologous
HL_4LFB_016
HL_87030.2
HL_4WT1_0171/13/786:796No text annotation
Not in a motif group
homologous
HL_4LFB_017
HL_12326.1
HL_4WT1_0181/13/838:848No text annotation
Not in a motif group
homologous
HL_6CZR_089
HL_53837.1
HL_4WT1_0191/13/862:867GNRA
Not in a motif group
homologous
HL_4LFB_019
HL_42097.2
HL_4WT1_0201/13/897:902GNRA
Not in a motif group
homologous
HL_5J7L_020
HL_42097.2
HL_4WT1_0211/13/963:972No text annotation
Not in a motif group
homologous
HL_4LFB_021
NA
HL_4WT1_0221/13/1012:1017GNRA
Not in a motif group
homologous
HL_4LFB_022
HL_42097.2
HL_4WT1_0231/13/1076:1081GNRA
Not in a motif group
homologous
HL_4LFB_024
HL_42097.2
HL_4WT1_0241/13/1089:1096No text annotation
Not in a motif group
homologous
HL_4LFB_025
HL_71554.2
HL_4WT1_0251/13/1134:1140No text annotation
Not in a motif group
homologous
HL_6CZR_097
NA
HL_4WT1_0261/13/1165:1171GNRA
Not in a motif group
homologous
HL_4LFB_027
HL_42097.2
HL_4WT1_0271/13/1265:1270Other HL
Not in a motif group
homologous
HL_4LFB_028
HL_42097.2
HL_4WT1_0281/13/1314:1323No text annotation
Not in a motif group
homologous
HL_4LFB_029
HL_89380.2
HL_4WT1_0291/13/1356:1366No text annotation
Not in a motif group
HL_4WT1_0301/13/1449:1454No text annotation
Not in a motif group
homologous
HL_6CZR_102
HL_49722.1
HL_4WT1_0311/13/1515:1520No text annotation
Not in a motif group
homologous
HL_6CZR_103
NA
HL_4WT1_0321/14/59:68No text annotation
Not in a motif group
homologous
HL_7RQB_001
HL_99167.1
HL_4WT1_0331/14/87:95No text annotation
Not in a motif group
homologous
HL_7RQB_002
HL_96598.1
HL_4WT1_0341/14/123:128No text annotation
Not in a motif group
homologous
HL_7RQB_003
HL_75407.1
HL_4WT1_0351/14/137A:141ANo text annotation
Not in a motif group
homologous
HL_7RQB_004
HL_79921.3
HL_4WT1_0371/14/194:201No text annotation
Not in a motif group
homologous
HL_5J7L_139
HL_06192.2
HL_4WT1_0381/14/225:230No text annotation
Not in a motif group
homologous
HL_7RQB_007
HL_02862.2
HL_4WT1_0391/14/246:252No text annotation
Not in a motif group
homologous
HL_7RQB_008
HL_67216.7
HL_4WT1_0401/14/270K:270NNo text annotation
Not in a motif group
HL_4WT1_0411/14/305:312No text annotation
Not in a motif group
homologous
HL_7RQB_010
HL_89380.2
HL_4WT1_0421/14/319:323No text annotation
Not in a motif group
homologous
HL_7RQB_011
HL_75407.1
HL_4WT1_0431/14/327:335No text annotation
Not in a motif group
homologous
HL_7RQB_012
HL_08002.9
HL_4WT1_0441/14/382:392No text annotation
Not in a motif group
homologous
HL_7RQB_013
HL_91503.4
HL_4WT1_0451/14/410:417No text annotation
Not in a motif group
homologous
HL_7RQB_014
HL_96598.1
HL_4WT1_0461/14/462:467No text annotation
Not in a motif group
homologous
HL_7RQB_015
HL_42097.2
HL_4WT1_0471/14/487:493No text annotation
Not in a motif group
homologous
HL_7RQB_016
HL_42097.2
HL_4WT1_0481/14/544:549GNRA
Not in a motif group
geometric
HL_4ENC_002
HL_42097.2
HL_4WT1_0491/14/566:575No text annotation
Not in a motif group
geometric
HL_7RQB_018
HL_89380.2
HL_4WT1_0501/14/611:617No text annotation
Not in a motif group
homologous
HL_7RQB_019
HL_32369.1
HL_4WT1_0511/14/629:634No text annotation
Not in a motif group
homologous
HL_7RQB_020
HL_42097.2
HL_4WT1_0521/14/641:647GNRA
Not in a motif group
geometric
HL_4V9F_045
HL_42097.2
HL_4WT1_0541/14/712:719No text annotation
Not in a motif group
homologous
HL_7RQB_022
HL_84085.2
HL_4WT1_0551/14/744:753No text annotation
Not in a motif group
homologous
HL_7RQB_023
HL_39334.6
HL_4WT1_0561/14/779:785No text annotation
Not in a motif group
homologous
HL_7A0S_023
HL_27930.1
HL_4WT1_0571/14/826:831No text annotation
Not in a motif group
homologous
HL_7RQB_025
HL_64365.1
HL_4WT1_0591/14/955:962No text annotation
Not in a motif group
geometric
HL_7RQB_027
HL_42097.2
HL_4WT1_0601/14/978:985No text annotation
Not in a motif group
homologous
HL_7RQB_028
HL_64430.2
HL_4WT1_0631/14/1169:1180No text annotation
Not in a motif group
HL_4WT1_0641/14/1223:1228No text annotation
Not in a motif group
homologous
HL_7RQB_032
HL_42097.2
HL_4WT1_0651/14/1281:1289No text annotation
Not in a motif group
homologous
HL_7RQB_033
HL_89380.2
HL_4WT1_0661/14/1324:1330No text annotation
Not in a motif group
homologous
HL_7RQB_034
HL_46680.1
HL_4WT1_0671/14/1363:1368Other HL
Not in a motif group
homologous
HL_5J7L_167
HL_87030.2
HL_4WT1_0681/14/1389:1398No text annotation
Not in a motif group
homologous
HL_7RQB_036
HL_69023.2
HL_4WT1_0691/14/1451:1459No text annotation
Not in a motif group
homologous
HL_7RQB_037
HL_32426.1
HL_4WT1_0701/14/1492:1498No text annotation
Not in a motif group
homologous
HL_7RQB_038
HL_46680.1
HL_4WT1_0711/14/1532:1539No text annotation
Not in a motif group
HL_4WT1_0721/14/1565:1568No text annotation
Not in a motif group
homologous
HL_7A0S_039
HL_38927.2
HL_4WT1_0731/14/1612:1619No text annotation
Not in a motif group
homologous
HL_7RQB_040
HL_64430.2
HL_4WT1_0741/14/1630A:1635No text annotation
Not in a motif group
homologous
HL_7RQB_041
HL_01057.1
HL_4WT1_0751/14/1691:1696No text annotation
Not in a motif group
homologous
HL_7RQB_042
HL_03562.2
HL_4WT1_0761/14/1727:1733No text annotation
Not in a motif group
HL_4WT1_0771/14/1752:1756No text annotation
Not in a motif group
homologous
HL_7RQB_044
HL_76539.2
HL_4WT1_0781/14/1777:1787No text annotation
Not in a motif group
homologous
HL_7RQB_045
HL_43613.5
HL_4WT1_0791/14/1806:1811No text annotation
Not in a motif group
homologous
HL_7RQB_046
HL_42097.2
HL_4WT1_0801/14/1864:1878No text annotation
Not in a motif group
homologous
HL_7RQB_047
HL_42097.2
HL_4WT1_0811/14/1910:1920No text annotation
Not in a motif group
geometric
HL_5TBW_049
HL_71924.2
HL_4WT1_0821/14/1949:1957No text annotation
Not in a motif group
homologous
HL_5J7L_182
HL_51824.1
HL_4WT1_0831/14/2027:2036No text annotation
Not in a motif group
homologous
HL_7RQB_050
HL_90642.6
HL_4WT1_0851/14/2209:2215No text annotation
Not in a motif group
homologous
HL_7RQB_052
HL_98426.1
HL_4WT1_0861/14/2248:2256No text annotation
Not in a motif group
homologous
HL_4WF9_049
HL_53171.2
HL_4WT1_0871/14/2264:2276No text annotation
Not in a motif group
homologous
HL_7RQB_054
HL_19870.6
HL_4WT1_0881/14/2302:2314No text annotation
Not in a motif group
HL_4WT1_0891/14/2324:2331No text annotation
Not in a motif group
homologous
HL_7RQB_056
HL_12078.2
HL_4WT1_0901/14/2355:2362No text annotation
Not in a motif group
homologous
HL_7RQB_057
HL_09136.1
HL_4WT1_0911/14/2374:2379GNRA
Not in a motif group
homologous
HL_5J7L_191
HL_42097.2
HL_4WT1_0921/14/2404:2413No text annotation
Not in a motif group
homologous
HL_7RQB_059
HL_30784.2
HL_4WT1_0941/14/2528:2535No text annotation
Not in a motif group
homologous
HL_7RQB_061
HL_91104.1
HL_4WT1_0951/14/2551:2557No text annotation
Not in a motif group
homologous
HL_4WF9_058
HL_43656.2
HL_4WT1_0961/14/2594:2599No text annotation
Not in a motif group
homologous
HL_7RQB_063
HL_42097.2
HL_4WT1_0971/14/2658:2663GNRA
Not in a motif group
geometric
HL_5B2T_003
HL_42097.2
HL_4WT1_0981/14/2701:2706No text annotation
Not in a motif group
homologous
HL_7RQB_065
HL_53171.2
HL_4WT1_0991/14/2745:2759No text annotation
Not in a motif group
homologous
HL_7A0S_065
HL_56677.7
HL_4WT1_1001/14/2819:2827No text annotation
Not in a motif group
homologous
HL_7RQB_068
HL_27930.1
HL_4WT1_1011/14/2856:2861No text annotation
Not in a motif group
homologous
HL_7RQB_069
HL_42097.2
HL_4WT1_1021/16/38:44No text annotation
Not in a motif group
geometric
HL_7RQB_070
HL_87939.1
HL_4WT1_1031/16/86:90GNRA
Not in a motif group
homologous
HL_4V9F_072
HL_42097.2
HL_4WT1_1041/1G/12:22No text annotation
Not in a motif group
homologous
HL_5J7L_001
HL_89881.2
HL_4WT1_1061/1G/158:163GNRA
Not in a motif group
homologous
HL_4LFB_003
HL_42097.2
HL_4WT1_1071/1G/186F:191ANo text annotation
Not in a motif group
homologous
HL_6CZR_075
HL_10278.1
HL_4WT1_1081/1G/201:216No text annotation
Not in a motif group
homologous
HL_4LFB_005
HL_91104.1
HL_4WT1_1091/1G/259:267No text annotation
Not in a motif group
homologous
HL_4LFB_006
HL_69023.2
HL_4WT1_1101/1G/296:301GNRA
Not in a motif group
homologous
HL_4LFB_007
HL_42097.2
HL_4WT1_1111/1G/320:333No text annotation
Not in a motif group
homologous
HL_4LFB_008
HL_81205.2
HL_4WT1_1121/1G/342:347UNCG
Not in a motif group
homologous
HL_4LFB_009
HL_03562.2
HL_4WT1_1131/1G/379:384GNRA
Not in a motif group
homologous
HL_4LFB_010
HL_42097.2
HL_4WT1_1141/1G/419:424No text annotation
Not in a motif group
homologous
HL_6CZR_082
HL_03562.2
HL_4WT1_1151/1G/457:475No text annotation
Not in a motif group
HL_4WT1_1161/1G/522:527No text annotation
Not in a motif group
geometric
HL_5J7L_143
HL_75407.1
HL_4WT1_1171/1G/617:623No text annotation
Not in a motif group
homologous
HL_4LFB_014
HL_26881.1
HL_4WT1_1181/1G/689:698No text annotation
Not in a motif group
homologous
HL_4LFB_015
HL_12326.1
HL_4WT1_1191/1G/726:731Other HL
Not in a motif group
homologous
HL_4LFB_016
HL_87030.2
HL_4WT1_1201/1G/786:796No text annotation
Not in a motif group
homologous
HL_4LFB_017
HL_12326.1
HL_4WT1_1211/1G/838:848No text annotation
Not in a motif group
HL_4WT1_1221/1G/862:867GNRA
Not in a motif group
homologous
HL_4LFB_019
HL_42097.2
HL_4WT1_1231/1G/897:902GNRA
Not in a motif group
homologous
HL_4LFB_020
HL_42097.2
HL_4WT1_1251/1G/1010:1019No text annotation
Not in a motif group
HL_4WT1_1271/1G/1076:1081GNRA
Not in a motif group
homologous
HL_5J7L_023
HL_42097.2
HL_4WT1_1281/1G/1089:1096No text annotation
Not in a motif group
homologous
HL_4LFB_025
HL_71554.2
HL_4WT1_1291/1G/1134:1140No text annotation
Not in a motif group
homologous
HL_6CZR_097
NA
HL_4WT1_1301/1G/1165:1171GNRA
Not in a motif group
homologous
HL_4LFB_027
HL_42097.2
HL_4WT1_1311/1G/1265:1270Other HL
Not in a motif group
homologous
HL_4LFB_028
HL_42097.2
HL_4WT1_1321/1G/1314:1323No text annotation
Not in a motif group
homologous
HL_4LFB_029
HL_89380.2
HL_4WT1_1331/1G/1356:1366No text annotation
Not in a motif group
homologous
HL_4LFB_030
HL_96366.1
HL_4WT1_1341/1G/1449:1454No text annotation
Not in a motif group
geometric
HL_5T16_002
HL_28980.1
HL_4WT1_1351/1G/1515:1520No text annotation
Not in a motif group
homologous
HL_6CZR_103
NA
HL_4WT1_1361/1H/59:68No text annotation
Not in a motif group
homologous
HL_7RQB_001
HL_99167.1
HL_4WT1_1371/1H/87:95No text annotation
Not in a motif group
homologous
HL_7RQB_002
HL_96598.1
HL_4WT1_1381/1H/123:128No text annotation
Not in a motif group
homologous
HL_7RQB_003
HL_75407.1
HL_4WT1_1391/1H/137A:141ANo text annotation
Not in a motif group
homologous
HL_7RQB_004
HL_79921.3
HL_4WT1_1401/1H/155:171No text annotation
Not in a motif group
geometric
HL_5J7L_143
HL_75407.1
HL_4WT1_1411/1H/194:201No text annotation
Not in a motif group
homologous
HL_7RQB_006
HL_06192.2
HL_4WT1_1421/1H/225:230No text annotation
Not in a motif group
homologous
HL_7A0S_007
HL_02862.2
HL_4WT1_1431/1H/246:252No text annotation
Not in a motif group
homologous
HL_7RQB_008
HL_67216.7
HL_4WT1_1441/1H/270J:270PNo text annotation
Not in a motif group
HL_4WT1_1451/1H/305:312No text annotation
Not in a motif group
homologous
HL_7RQB_010
HL_89380.2
HL_4WT1_1461/1H/319:323No text annotation
Not in a motif group
homologous
HL_7RQB_011
HL_75407.1
HL_4WT1_1471/1H/327:335No text annotation
Not in a motif group
homologous
HL_7RQB_012
HL_08002.9
HL_4WT1_1481/1H/382:392No text annotation
Not in a motif group
homologous
HL_7RQB_013
HL_91503.4
HL_4WT1_1491/1H/410:417No text annotation
Not in a motif group
homologous
HL_7RQB_014
HL_96598.1
HL_4WT1_1501/1H/462:467No text annotation
Not in a motif group
homologous
HL_7RQB_015
HL_42097.2
HL_4WT1_1511/1H/487:493No text annotation
Not in a motif group
homologous
HL_7RQB_016
HL_42097.2
HL_4WT1_1521/1H/544:549Other HL
Not in a motif group
geometric
HL_1G1X_005
HL_87030.2
HL_4WT1_1531/1H/566:575No text annotation
Not in a motif group
homologous
HL_7RQB_018
HL_89380.2
HL_4WT1_1541/1H/611:617No text annotation
Not in a motif group
homologous
HL_7A0S_019
HL_32369.1
HL_4WT1_1551/1H/629:634No text annotation
Not in a motif group
homologous
HL_7RQB_020
HL_42097.2
HL_4WT1_1561/1H/641:647No text annotation
Not in a motif group
homologous
HL_7RQB_021
HL_42097.2
HL_4WT1_1581/1H/712:719No text annotation
Not in a motif group
homologous
HL_7RQB_022
HL_84085.2
HL_4WT1_1591/1H/744:753No text annotation
Not in a motif group
homologous
HL_7RQB_023
HL_39334.6
HL_4WT1_1601/1H/779:785No text annotation
Not in a motif group
homologous
HL_7A0S_023
HL_27930.1
HL_4WT1_1611/1H/826:831No text annotation
Not in a motif group
homologous
HL_5J7L_157
HL_64365.1
HL_4WT1_1631/1H/955:962No text annotation
Not in a motif group
homologous
HL_7RQB_027
HL_42097.2
HL_4WT1_1641/1H/978:985No text annotation
Not in a motif group
homologous
HL_7RQB_028
HL_64430.2
HL_4WT1_1661/1H/1170:1179No text annotation
Not in a motif group
geometric
HL_4V9F_011
HL_75407.1
HL_4WT1_1671/1H/1223:1228No text annotation
Not in a motif group
homologous
HL_7RQB_032
HL_42097.2
HL_4WT1_1681/1H/1281:1289No text annotation
Not in a motif group
homologous
HL_7RQB_033
HL_89380.2
HL_4WT1_1691/1H/1324:1330No text annotation
Not in a motif group
homologous
HL_7RQB_034
HL_46680.1
HL_4WT1_1701/1H/1363:1368No text annotation
Not in a motif group
homologous
HL_7RQB_035
HL_87030.2
HL_4WT1_1711/1H/1389:1398No text annotation
Not in a motif group
homologous
HL_7RQB_036
HL_69023.2
HL_4WT1_1721/1H/1451:1459No text annotation
Not in a motif group
homologous
HL_7RQB_037
HL_32426.1
HL_4WT1_1731/1H/1492:1498No text annotation
Not in a motif group
homologous
HL_7RQB_038
HL_46680.1
HL_4WT1_1751/1H/1565:1568No text annotation
Not in a motif group
homologous
HL_7A0S_039
HL_38927.2
HL_4WT1_1761/1H/1612:1619No text annotation
Not in a motif group
homologous
HL_7RQB_040
HL_64430.2
HL_4WT1_1771/1H/1630A:1635No text annotation
Not in a motif group
homologous
HL_7RQB_041
HL_01057.1
HL_4WT1_1781/1H/1691:1696UNCG
Not in a motif group
geometric
HL_4WF9_040
HL_03562.2
HL_4WT1_1791/1H/1727:1733No text annotation
Not in a motif group
homologous
HL_7RQB_043
HL_43656.2
HL_4WT1_1801/1H/1752:1756No text annotation
Not in a motif group
homologous
HL_7RQB_044
HL_76539.2
HL_4WT1_1811/1H/1777:1787No text annotation
Not in a motif group
homologous
HL_7RQB_045
HL_43613.5
HL_4WT1_1821/1H/1806:1811No text annotation
Not in a motif group
homologous
HL_7RQB_046
HL_42097.2
HL_4WT1_1831/1H/1864:1878No text annotation
Not in a motif group
homologous
HL_7RQB_047
HL_42097.2
HL_4WT1_1841/1H/1910:1920No text annotation
Not in a motif group
geometric
HL_5TBW_049
HL_71924.2
HL_4WT1_1851/1H/1949:1957No text annotation
Not in a motif group
homologous
HL_7RQB_049
HL_51824.1
HL_4WT1_1861/1H/2027:2036No text annotation
Not in a motif group
homologous
HL_7RQB_050
HL_90642.6
HL_4WT1_1871/1H/2143:2148UNCG
Not in a motif group
homologous
HL_3U4M_001
HL_03562.2
HL_4WT1_1881/1H/2209:2215No text annotation
Not in a motif group
homologous
HL_7RQB_052
HL_98426.1
HL_4WT1_1891/1H/2248:2256No text annotation
Not in a motif group
homologous
HL_7RQB_053
NA
HL_4WT1_1901/1H/2264:2276No text annotation
Not in a motif group
homologous
HL_7RQB_054
HL_19870.6
HL_4WT1_1911/1H/2303:2313No text annotation
Not in a motif group
homologous
HL_5J7L_188
HL_11805.3
HL_4WT1_1921/1H/2324:2331No text annotation
Not in a motif group
homologous
HL_7RQB_056
HL_12078.2
HL_4WT1_1931/1H/2355:2362No text annotation
Not in a motif group
homologous
HL_7RQB_057
HL_09136.1
HL_4WT1_1941/1H/2374:2379No text annotation
Not in a motif group
homologous
HL_7RQB_058
HL_42097.2
HL_4WT1_1951/1H/2404:2413No text annotation
Not in a motif group
homologous
HL_7RQB_059
HL_30784.2
HL_4WT1_1961/1H/2471:2479No text annotation
Not in a motif group
geometric
HL_361D_002
HL_90617.2
HL_4WT1_1971/1H/2528:2535No text annotation
Not in a motif group
homologous
HL_7RQB_061
HL_91104.1
HL_4WT1_1981/1H/2551:2557No text annotation
Not in a motif group
homologous
HL_4WF9_058
HL_43656.2
HL_4WT1_1991/1H/2594:2599No text annotation
Not in a motif group
homologous
HL_7RQB_063
HL_42097.2
HL_4WT1_2001/1H/2658:2663No text annotation
Not in a motif group
geometric
HL_7RQB_064
HL_42097.2
HL_4WT1_2011/1H/2701:2706No text annotation
Not in a motif group
homologous
HL_7RQB_065
HL_53171.2
HL_4WT1_2021/1H/2745:2759No text annotation
Not in a motif group
homologous
HL_7RQB_066
HL_56677.7
HL_4WT1_2041/1H/2819:2827No text annotation
Not in a motif group
homologous
HL_7RQB_068
HL_27930.1
HL_4WT1_2051/1H/2856:2861No text annotation
Not in a motif group
homologous
HL_7RQB_069
HL_42097.2
HL_4WT1_2061/1J/38:44No text annotation
Not in a motif group
HL_4WT1_2071/1J/86:90No text annotation
Not in a motif group
HL_4WT1_2091/1K/30:40No text annotation
Not in a motif group
homologous
HL_1B23_002
NA
HL_4WT1_2101/1K/53:61No text annotation
Not in a motif group
homologous
HL_1SER_002
NA
HL_4WT1_2111/1L/12:23No text annotation
Not in a motif group
homologous
HL_1SER_001
NA
HL_4WT1_2121/1L/30:40No text annotation
Not in a motif group
homologous
HL_5IB8_208
NA
HL_4WT1_2131/1L/53:61T-loop with 2 stacked bulged bases
Not in a motif group
homologous
HL_1U0B_003
HL_71309.1
HL_4WT1_2141/2K/13:23No text annotation
Not in a motif group
homologous
HL_4TUE_033
HL_25462.2
HL_4WT1_2151/2K/32:40No text annotation
Not in a motif group
homologous
HL_5E81_212
NA
HL_4WT1_2161/2K/54:62No text annotation
Not in a motif group
homologous
HL_5E81_213
NA
HL_4WT1_2171/2L/13:23No text annotation
Not in a motif group
homologous
HL_1QF6_001
NA
HL_4WT1_2181/2L/32:40No text annotation
Not in a motif group
homologous
HL_5E81_212
NA
HL_4WT1_2191/2L/54:62No text annotation
Not in a motif group
homologous
HL_5E81_213
NA
HL_4WT1_2201/3K/11:24No text annotation
Not in a motif group
HL_4WT1_2221/3K/52:62No text annotation
Not in a motif group
homologous
HL_5EL4_223
NA
HL_4WT1_2231/3L/13:22No text annotation
Not in a motif group
homologous
HL_5E81_219
NA
HL_4WT1_2241/3L/31:39No text annotation
Not in a motif group
homologous
HL_5E81_220
NA
HL_4WT1_2251/3L/53:61T-loop with 2 stacked bulged bases
Not in a motif group
homologous
HL_5B63_004
HL_22280.1

Problematic loops

#loop idProblemSequence
HL_4WT1_002No text annotation
HL_4WT1_036No text annotation
HL_4WT1_053No text annotation
HL_4WT1_058No text annotation
HL_4WT1_061No text annotation
HL_4WT1_062No text annotation
HL_4WT1_084No text annotation
HL_4WT1_093No text annotation
HL_4WT1_105No text annotation
HL_4WT1_124No text annotation
HL_4WT1_126No text annotation
HL_4WT1_157No text annotation
HL_4WT1_162No text annotation
HL_4WT1_165No text annotation
HL_4WT1_174No text annotation
HL_4WT1_203No text annotation
HL_4WT1_208No text annotation
HL_4WT1_221No text annotation

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
IL_4WT1_0011/13/30:32,
1/13/552:553
Single bulged G
Not in a motif group
homologous
IL_4LFB_001
IL_00225.3
IL_4WT1_0021/13/44:45,
1/13/396:398
Single bulged A
Not in a motif group
homologous
IL_4LFB_002
IL_37497.3
IL_4WT1_0031/13/47:52,
1/13/359:361
No text annotation
Not in a motif group
homologous
IL_4LFB_003
IL_11178.1
IL_4WT1_0041/13/54:56,
1/13/356:357
Minor groove platform
Not in a motif group
homologous
IL_5J7L_004
IL_93353.1
IL_4WT1_0051/13/63:66,
1/13/103:104
Multiple bulged bases
Not in a motif group
homologous
IL_4LFB_005
IL_76389.1
IL_4WT1_0061/13/67:69,
1/13/99:102
No text annotation
Not in a motif group
geometric
IL_4LFB_006
IL_95997.1
IL_4WT1_0071/13/69:75,
1/13/95:99
Tandem non-canonical cWW pairs
Not in a motif group
geometric
IL_1D4R_001
IL_30621.3
IL_4WT1_0081/13/129:131,
1/13/231:232
Multiple bulged bases
Not in a motif group
homologous
IL_6CZR_119
IL_16396.2
IL_4WT1_0111/13/148:154,
1/13/167:174
tWH-tWH-tHW-tHW
Not in a motif group
homologous
IL_6CZR_121
IL_80604.2
IL_4WT1_0121/13/155:157,
1/13/164:166
No text annotation
Not in a motif group
geometric
IL_4V88_417
IL_95997.1
IL_4WT1_0131/13/184:186B,
1/13/191E:193
No text annotation
Not in a motif group
IL_4WT1_0141/13/186C:186E,
1/13/191B:191D
No text annotation
Not in a motif group
geometric
IL_4KR9_001
IL_51629.2
IL_4WT1_0151/13/242:247,
1/13/277:284
Kink-turn with non-sequential stacking
Not in a motif group
homologous
IL_6CZR_123
IL_45067.2
IL_4WT1_0161/13/249:252,
1/13/274:275
No text annotation
Not in a motif group
homologous
IL_4LFB_012
IL_48100.2
IL_4WT1_0171/13/292:293,
1/13/304:308
C-loop
Not in a motif group
homologous
IL_4LFB_013
IL_37712.2
IL_4WT1_0181/13/367:369,
1/13/392:393
Single bulged U
Not in a motif group
homologous
IL_5J7L_017
IL_83039.14
IL_4WT1_0191/13/371:375,
1/13/389:390
C-loop
Not in a motif group
homologous
IL_5J7L_018
IL_75255.1
IL_4WT1_0201/13/375:376,
1/13/387:389
Single bulged G
Not in a motif group
geometric
IL_5J7L_019
IL_00225.3
IL_4WT1_0221/13/409:416,
1/13/427:433
No text annotation
Not in a motif group
homologous
IL_4LFB_017
IL_28026.1
IL_4WT1_0231/13/446:450,
1/13/483:488
6x5 Sarcin-Ricin; G-bulge
Not in a motif group
homologous
IL_6CZR_130
IL_88269.3
IL_4WT1_0241/13/504:511,
1/13/540:541
SSU/LSU pseudoknot
Not in a motif group
homologous
IL_5J7L_024
IL_15861.7
IL_4WT1_0251/13/515:521,
1/13/528:536
No text annotation
Not in a motif group
geometric
IL_4V88_415
IL_55871.1
IL_4WT1_0261/13/569:575,
1/13/880:881
No text annotation
Not in a motif group
homologous
IL_5J7L_026
IL_69996.1
IL_4WT1_0271/13/580:584,
1/13/757:761
tSH-tHW-tHS
Not in a motif group
homologous
IL_6CZR_135
IL_17136.1
IL_4WT1_0291/13/594:596,
1/13/644:645
Major groove platform
Not in a motif group
homologous
IL_4LFB_024
IL_27635.2
IL_4WT1_0301/13/597:598,
1/13/640:643
Major groove minor groove platform; mini C-loop
Not in a motif group
homologous
IL_4LFB_025
IL_09061.6
IL_4WT1_0311/13/605:613,
1/13/627:633
No text annotation
Not in a motif group
homologous
IL_4LFB_026
IL_78349.1
IL_4WT1_0331/13/654:655,
1/13/751:754
Major groove platform; stack outside cWW
Not in a motif group
homologous
IL_5J7L_031
IL_50694.2
IL_4WT1_0341/13/657:658,
1/13/747:749
Major groove platform
Not in a motif group
homologous
IL_4LFB_028
IL_27635.2
IL_4WT1_0351/13/662:666,
1/13/740:743
Tandem non-canonical cWW pairs
Not in a motif group
homologous
IL_4LFB_029
IL_71110.1
IL_4WT1_0361/13/673:678,
1/13/712:717
No text annotation
Not in a motif group
homologous
IL_4LFB_030
IL_04668.1
IL_4WT1_0371/13/683:688,
1/13/699:707
Kink-turn
Not in a motif group
homologous
IL_4LFB_031
IL_37722.1
IL_4WT1_0381/13/774:778,
1/13/804:805
Left turn
Not in a motif group
homologous
IL_4LFB_032
IL_29346.1
IL_4WT1_0391/13/779:783,
1/13/799:803
tSH-tHW-tHS
Not in a motif group
homologous
IL_4LFB_033
IL_17136.1
IL_4WT1_0401/13/887:894,
1/13/905:910
8x6 Sarcin-Ricin with inserted Y; G-bulge
Not in a motif group
homologous
IL_4LFB_034
IL_24606.2
IL_4WT1_0411/13/922:923,
1/13/1393:1395
Single bulged A
Not in a motif group
homologous
IL_4LFB_035
IL_37497.3
IL_4WT1_0421/13/925:927,
1/13/1390:1391
Single bulged G
Not in a motif group
homologous
IL_4LFB_036
IL_00225.3
IL_4WT1_0431/13/933:935,
1/13/1380:1384
Minor groove platform
Not in a motif group
homologous
IL_4LFB_037
IL_47078.1
IL_4WT1_0441/13/953:954,
1/13/1226:1228
Minor groove platform
Not in a motif group
homologous
IL_4LFB_038
IL_42622.2
IL_4WT1_0451/13/993:997,
1/13/1044:1045
Minor groove platform
Not in a motif group
homologous
IL_4LFB_039
IL_47078.1
IL_4WT1_0471/13/1003:1006,
1/13/1023:1037
No text annotation
Not in a motif group
IL_4WT1_0481/13/1007:1009,
1/13/1020:1022
No text annotation
Not in a motif group
geometric
IL_4V9F_023
IL_95997.1
IL_4WT1_0491/13/1048:1050,
1/13/1208:1209
Single bulged U
Not in a motif group
homologous
IL_4LFB_042
IL_83039.14
IL_4WT1_0501/13/1052:1056,
1/13/1204:1206
Isolated cWS basepair
Not in a motif group
homologous
IL_4LFB_044
IL_76319.2
IL_4WT1_0511/13/1057:1058,
1/13/1199:1203
Minor groove platform
Not in a motif group
homologous
IL_5J7L_048
IL_93353.1
IL_4WT1_0521/13/1060:1061,
1/13/1195:1197
Single bulged U
Not in a motif group
homologous
IL_6CZR_156
IL_83039.14
IL_4WT1_0531/13/1061:1063,
1/13/1193:1195
No text annotation
Not in a motif group
geometric
IL_4LFB_047
IL_95997.1
IL_4WT1_0551/13/1124:1132,
1/13/1142:1149
No text annotation
Not in a motif group
IL_4WT1_0581/13/1247:1253,
1/13/1284:1290
No text annotation
Not in a motif group
homologous
IL_4LFB_051
IL_09129.1
IL_4WT1_0591/13/1255:1258,
1/13/1277:1282
No text annotation
Not in a motif group
homologous
IL_4LFB_052
IL_84205.1
IL_4WT1_0601/13/1259:1262,
1/13/1273:1276
Double sheared
Not in a motif group
geometric
IL_5J7L_256
IL_09705.9
IL_4WT1_0611/13/1303:1308,
1/13/1329:1334
No text annotation
Not in a motif group
homologous
IL_4LFB_055
IL_19954.2
IL_4WT1_0621/13/1399:1401,
1/13/1501:1504
No text annotation
Not in a motif group
geometric
IL_4V88_463
IL_36143.3
IL_4WT1_0631/13/1401:1404,
1/13/1497:1501
No text annotation
Not in a motif group
geometric
IL_4V88_464
IL_99670.1
IL_4WT1_0641/13/1405:1407,
1/13/1494:1496
No text annotation
Not in a motif group
geometric
IL_5MWI_004
IL_95997.1
IL_4WT1_0651/13/1407:1409,
1/13/1491:1494
Decoding loop related
Not in a motif group
geometric
IL_3C3Z_002
IL_64417.1
IL_4WT1_0661/13/1412:1414,
1/13/1486:1488
No text annotation
Not in a motif group
homologous
IL_5J7L_061
IL_95997.1
IL_4WT1_0671/13/1416:1419,
1/13/1481:1484
Double sheared
Not in a motif group
homologous
IL_5J7L_062
IL_09705.9
IL_4WT1_0681/13/1431:1435,
1/13/1466:1469
UAA/GAN variation
Not in a motif group
geometric
IL_4LFB_062
IL_07235.1
IL_4WT1_0691/13/1435:1437,
1/13/1464:1466
No text annotation
Not in a motif group
homologous
IL_4LFB_063
IL_95997.1
IL_4WT1_0701/13/1440:1447,
1/13/1459:1461
No text annotation
Not in a motif group
homologous
IL_4LFB_064
IL_92788.2
IL_4WT1_0711/14/24:30,
1/14/510:516
Triple sheared with non-canonical cWW
Not in a motif group
homologous
IL_7RQB_001
IL_66414.6
IL_4WT1_0721/14/36:37,
1/14/442:444
Single bulged A
Not in a motif group
homologous
IL_7A0S_002