4V9P Internal, Hairpin and 3-way Junction Loop Motifs
Valid loops
3D | Loop id | Location | Annotation; motif group | Mapped info |
---|---|---|---|---|
HL_4V9P_001 | 1/AA/59:68 | No text annotation Not in a motif group | homologous HL_5J7L_134 HL_18177.1 | |
HL_4V9P_002 | 1/AA/87:95 | No text annotation Not in a motif group | homologous HL_5J7L_135 HL_84193.1 | |
HL_4V9P_003 | 1/AA/123:128 | No text annotation Not in a motif group | homologous HL_4WF9_003 HL_75407.1 | |
HL_4V9P_004 | 1/AA/136:143 | No text annotation Not in a motif group | ||
HL_4V9P_005 | 1/AA/158:168 | No text annotation Not in a motif group | homologous HL_5J7L_138 HL_81820.1 | |
HL_4V9P_006 | 1/AA/194:201 | No text annotation Not in a motif group | homologous HL_5J7L_139 HL_06192.2 | |
HL_4V9P_007 | 1/AA/225:230 | No text annotation Not in a motif group | homologous HL_5J7L_140 HL_27930.1 | |
HL_4V9P_008 | 1/AA/246:252 | No text annotation Not in a motif group | homologous HL_5J7L_141 HL_67216.7 | |
HL_4V9P_009 | 1/AA/305:312 | T-loop with 1 bulged base Not in a motif group | homologous HL_5J7L_142 HL_89380.2 | |
HL_4V9P_010 | 1/AA/319:323 | No text annotation Not in a motif group | homologous HL_5J7L_143 HL_75407.1 | |
HL_4V9P_011 | 1/AA/327:335 | No text annotation Not in a motif group | homologous HL_5J7L_144 HL_08002.8 | |
HL_4V9P_012 | 1/AA/382:392 | No text annotation Not in a motif group | homologous HL_5J7L_145 HL_91503.4 | |
HL_4V9P_013 | 1/AA/410:417 | No text annotation Not in a motif group | homologous HL_5J7L_146 HL_96598.1 | |
HL_4V9P_014 | 1/AA/462:467 | No text annotation Not in a motif group | homologous HL_7RQB_015 HL_42097.1 | |
HL_4V9P_015 | 1/AA/487:493 | No text annotation Not in a motif group | homologous HL_5J7L_148 HL_42097.1 | |
HL_4V9P_016 | 1/AA/543:550 | No text annotation Not in a motif group | homologous HL_5J7L_149 HL_79531.1 | |
HL_4V9P_017 | 1/AA/566:575 | T-loop with 2 stacked bulged bases Not in a motif group | geometric HL_5J7L_150 HL_89380.2 | |
HL_4V9P_018 | 1/AA/611:617 | No text annotation Not in a motif group | homologous HL_5J7L_151 HL_90617.2 | |
HL_4V9P_019 | 1/AA/629:634 | GNRA Not in a motif group | homologous HL_5J7L_152 HL_42097.1 | |
HL_4V9P_020 | 1/AA/641:647 | No text annotation Not in a motif group | homologous HL_5J7L_153 HL_77805.2 | |
HL_4V9P_021 | 1/AA/712:719 | No text annotation Not in a motif group | homologous HL_5J7L_154 HL_84085.2 | |
HL_4V9P_022 | 1/AA/744:753 | No text annotation Not in a motif group | homologous HL_4WF9_023 HL_39334.6 | |
HL_4V9P_023 | 1/AA/779:785 | No text annotation Not in a motif group | homologous HL_7A0S_023 HL_27930.1 | |
HL_4V9P_024 | 1/AA/826:831 | No text annotation Not in a motif group | homologous HL_7RQB_025 HL_64365.1 | |
HL_4V9P_026 | 1/AA/955:962 | GNRA Not in a motif group | homologous HL_4WF9_027 HL_42097.1 | |
HL_4V9P_027 | 1/AA/978:985 | No text annotation Not in a motif group | homologous HL_7A0S_027 HL_64430.2 | |
HL_4V9P_028 | 1/AA/1064:1074 | No text annotation Not in a motif group | homologous HL_6PRV_001 HL_07145.1 | |
HL_4V9P_029 | 1/AA/1092:1099 | No text annotation Not in a motif group | homologous HL_6PRV_002 HL_84085.2 | |
HL_4V9P_030 | 1/AA/1172:1177 | No text annotation Not in a motif group | ||
HL_4V9P_031 | 1/AA/1222:1227 | Other HL Not in a motif group | homologous HL_5J7L_164 HL_87030.2 | |
HL_4V9P_032 | 1/AA/1281:1289 | T-loop with 2 stacked bulged bases Not in a motif group | homologous HL_5J7L_165 HL_89380.2 | |
HL_4V9P_033 | 1/AA/1324:1330 | No text annotation Not in a motif group | homologous HL_5J7L_166 HL_46680.1 | |
HL_4V9P_034 | 1/AA/1363:1368 | Other HL Not in a motif group | homologous HL_5J7L_167 HL_87030.2 | |
HL_4V9P_035 | 1/AA/1389:1398 | No text annotation Not in a motif group | homologous HL_5J7L_168 HL_69023.2 | |
HL_4V9P_036 | 1/AA/1451:1459 | No text annotation Not in a motif group | geometric HL_5J7L_169 HL_53837.1 | |
HL_4V9P_037 | 1/AA/1492:1498 | No text annotation Not in a motif group | homologous HL_5J7L_170 HL_46680.1 | |
HL_4V9P_038 | 1/AA/1531:1540 | No text annotation Not in a motif group | ||
HL_4V9P_039 | 1/AA/1565:1568 | No text annotation Not in a motif group | homologous HL_7RQB_039 HL_38927.2 | |
HL_4V9P_040 | 1/AA/1612:1619 | No text annotation Not in a motif group | homologous HL_7RQB_040 HL_64430.2 | |
HL_4V9P_041 | 1/AA/1630:1636 | GNRA with one bulged base Not in a motif group | homologous HL_5J7L_174 HL_42097.1 | |
HL_4V9P_042 | 1/AA/1691:1696 | UNCG Not in a motif group | homologous HL_5J7L_175 HL_03562.2 | |
HL_4V9P_043 | 1/AA/1724:1736 | No text annotation Not in a motif group | ||
HL_4V9P_044 | 1/AA/1752:1756 | No text annotation Not in a motif group | homologous HL_5J7L_177 HL_76539.2 | |
HL_4V9P_045 | 1/AA/1777:1787 | No text annotation Not in a motif group | homologous HL_4WF9_043 HL_43613.5 | |
HL_4V9P_046 | 1/AA/1806:1811 | No text annotation Not in a motif group | homologous HL_5J7L_179 HL_42097.1 | |
HL_4V9P_047 | 1/AA/1868:1873 | No text annotation Not in a motif group | ||
HL_4V9P_048 | 1/AA/1910:1920 | No text annotation Not in a motif group | geometric HL_5TBW_049 HL_71924.2 | |
HL_4V9P_049 | 1/AA/1949:1957 | No text annotation Not in a motif group | homologous HL_5J7L_182 HL_51824.1 | |
HL_4V9P_050 | 1/AA/2027:2036 | No text annotation Not in a motif group | homologous HL_4WF9_047 HL_90642.6 | |
HL_4V9P_052 | 1/AA/2209:2215 | No text annotation Not in a motif group | homologous HL_5J7L_185 HL_16845.6 | |
HL_4V9P_053 | 1/AA/2248:2256 | No text annotation Not in a motif group | homologous HL_5J7L_186 NA | |
HL_4V9P_054 | 1/AA/2264:2276 | No text annotation Not in a motif group | homologous HL_5J7L_187 HL_19870.6 | |
HL_4V9P_055 | 1/AA/2303:2313 | No text annotation Not in a motif group | homologous HL_5J7L_188 HL_11805.3 | |
HL_4V9P_056 | 1/AA/2324:2331 | No text annotation Not in a motif group | homologous HL_5J7L_189 HL_12078.2 | |
HL_4V9P_057 | 1/AA/2356:2361 | Other HL Not in a motif group | homologous HL_5J7L_190 HL_87030.2 | |
HL_4V9P_058 | 1/AA/2374:2379 | GNRA Not in a motif group | homologous HL_5J7L_191 HL_42097.1 | |
HL_4V9P_059 | 1/AA/2404:2413 | No text annotation Not in a motif group | homologous HL_5J7L_192 HL_30784.2 | |
HL_4V9P_060 | 1/AA/2471:2479 | No text annotation Not in a motif group | homologous HL_5J7L_193 HL_06192.2 | |
HL_4V9P_061 | 1/AA/2528:2535 | No text annotation Not in a motif group | homologous HL_4WF9_057 HL_88526.2 | |
HL_4V9P_062 | 1/AA/2551:2557 | No text annotation Not in a motif group | homologous HL_4WF9_058 HL_43656.2 | |
HL_4V9P_063 | 1/AA/2594:2599 | GNRA Not in a motif group | homologous HL_5J7L_196 HL_42097.1 | |
HL_4V9P_064 | 1/AA/2658:2663 | No text annotation Not in a motif group | geometric HL_7RQB_064 HL_42097.1 | |
HL_4V9P_065 | 1/AA/2701:2706 | Ribsomal LSU H95 Not in a motif group | homologous HL_5J7L_198 HL_46680.1 | |
HL_4V9P_066 | 1/AA/2745:2759 | No text annotation Not in a motif group | homologous HL_5J7L_199 HL_56677.7 | |
HL_4V9P_067 | 1/AA/2796:2799 | No text annotation Not in a motif group | geometric HL_5F9R_002 HL_38927.2 | |
HL_4V9P_068 | 1/AA/2819:2827 | No text annotation Not in a motif group | homologous HL_5J7L_201 HL_27930.1 | |
HL_4V9P_069 | 1/AA/2856:2861 | No text annotation Not in a motif group | homologous HL_7A0S_068 HL_42097.1 | |
HL_4V9P_070 | 1/AB/38:44 | No text annotation Not in a motif group | homologous HL_7RQB_070 HL_87939.1 | |
HL_4V9P_071 | 1/AB/86:90 | No text annotation Not in a motif group | homologous HL_5J7L_204 HL_38927.2 | |
HL_4V9P_072 | 1/BA/12:22 | No text annotation Not in a motif group | homologous HL_4LFB_001 HL_89881.2 | |
HL_4V9P_074 | 1/BA/158:163 | GNRA Not in a motif group | homologous HL_5J7L_003 HL_42097.1 | |
HL_4V9P_075 | 1/BA/186:191 | GNRA Not in a motif group | homologous HL_5J7L_004 HL_42097.1 | |
HL_4V9P_077 | 1/BA/259:267 | No text annotation Not in a motif group | homologous HL_5J7L_006 HL_69023.2 | |
HL_4V9P_078 | 1/BA/296:301 | GNRA Not in a motif group | homologous HL_5J7L_007 HL_42097.1 | |
HL_4V9P_079 | 1/BA/320:333 | No text annotation Not in a motif group | homologous HL_5J7L_008 HL_81205.2 | |
HL_4V9P_080 | 1/BA/342:347 | UNCG Not in a motif group | homologous HL_5J7L_009 HL_03562.2 | |
HL_4V9P_081 | 1/BA/379:384 | GNRA Not in a motif group | homologous HL_5J7L_010 HL_42097.1 | |
HL_4V9P_082 | 1/BA/419:424 | UNCG Not in a motif group | homologous HL_4LFB_011 HL_03562.2 | |
HL_4V9P_084 | 1/BA/522:527 | No text annotation Not in a motif group | geometric HL_5J7L_143 HL_75407.1 | |
HL_4V9P_085 | 1/BA/617:623 | No text annotation Not in a motif group | homologous HL_5J7L_014 HL_26881.1 | |
HL_4V9P_086 | 1/BA/689:698 | No text annotation Not in a motif group | homologous HL_5J7L_015 HL_12326.1 | |
HL_4V9P_087 | 1/BA/726:731 | Other HL Not in a motif group | homologous HL_5J7L_016 HL_87030.2 | |
HL_4V9P_088 | 1/BA/786:796 | No text annotation Not in a motif group | homologous HL_5J7L_017 HL_12326.1 | |
HL_4V9P_090 | 1/BA/862:867 | GNRA Not in a motif group | homologous HL_5J7L_019 HL_42097.1 | |
HL_4V9P_091 | 1/BA/897:902 | GNRA Not in a motif group | homologous HL_5J7L_020 HL_42097.1 | |
HL_4V9P_092 | 1/BA/963:972 | No text annotation Not in a motif group | homologous HL_5J7L_021 NA | |
HL_4V9P_093 | 1/BA/1012:1017 | GNRA Not in a motif group | homologous HL_4LFB_022 HL_42097.1 | |
HL_4V9P_094 | 1/BA/1076:1081 | GNRA Not in a motif group | homologous HL_5J7L_023 HL_42097.1 | |
HL_4V9P_095 | 1/BA/1089:1096 | No text annotation Not in a motif group | homologous HL_4LFB_025 HL_71554.2 | |
HL_4V9P_096 | 1/BA/1133:1141 | No text annotation Not in a motif group | geometric HL_5TBW_021 HL_33817.1 | |
HL_4V9P_098 | 1/BA/1265:1270 | GNRA Not in a motif group | homologous HL_5J7L_027 HL_42097.1 | |
HL_4V9P_099 | 1/BA/1314:1323 | No text annotation Not in a motif group | homologous HL_4LFB_029 HL_89380.2 | |
HL_4V9P_100 | 1/BA/1356:1366 | No text annotation Not in a motif group | homologous HL_4LFB_030 HL_96366.1 | |
HL_4V9P_101 | 1/BA/1449:1454 | UNCG Not in a motif group | homologous HL_4LFB_031 HL_03562.2 | |
HL_4V9P_102 | 1/BA/1515:1520 | No text annotation Not in a motif group | homologous HL_5J7L_031 NA | |
HL_4V9P_103 | 1/CA/59:68 | No text annotation Not in a motif group | homologous HL_5J7L_134 HL_18177.1 | |
HL_4V9P_104 | 1/CA/87:95 | No text annotation Not in a motif group | homologous HL_5J7L_135 HL_84193.1 | |
HL_4V9P_105 | 1/CA/123:128 | No text annotation Not in a motif group | homologous HL_4WF9_003 HL_75407.1 | |
HL_4V9P_106 | 1/CA/136:143 | No text annotation Not in a motif group | ||
HL_4V9P_107 | 1/CA/158:168 | No text annotation Not in a motif group | homologous HL_5J7L_138 HL_81820.1 | |
HL_4V9P_108 | 1/CA/194:201 | No text annotation Not in a motif group | homologous HL_7RQB_006 HL_06192.2 | |
HL_4V9P_109 | 1/CA/225:230 | No text annotation Not in a motif group | homologous HL_5J7L_140 HL_27930.1 | |
HL_4V9P_110 | 1/CA/246:252 | No text annotation Not in a motif group | homologous HL_5J7L_141 HL_67216.7 | |
HL_4V9P_111 | 1/CA/305:312 | T-loop with 1 bulged base Not in a motif group | homologous HL_5J7L_142 HL_89380.2 | |
HL_4V9P_112 | 1/CA/319:323 | No text annotation Not in a motif group | homologous HL_5J7L_143 HL_75407.1 | |
HL_4V9P_113 | 1/CA/327:335 | No text annotation Not in a motif group | homologous HL_5J7L_144 HL_08002.8 | |
HL_4V9P_114 | 1/CA/382:392 | No text annotation Not in a motif group | homologous HL_5J7L_145 HL_91503.4 | |
HL_4V9P_115 | 1/CA/410:417 | No text annotation Not in a motif group | homologous HL_5J7L_146 HL_96598.1 | |
HL_4V9P_116 | 1/CA/462:467 | No text annotation Not in a motif group | homologous HL_7RQB_015 HL_42097.1 | |
HL_4V9P_117 | 1/CA/487:493 | No text annotation Not in a motif group | homologous HL_5J7L_148 HL_42097.1 | |
HL_4V9P_118 | 1/CA/543:550 | No text annotation Not in a motif group | geometric HL_4V9F_003 HL_52841.1 | |
HL_4V9P_119 | 1/CA/566:575 | T-loop with 2 stacked bulged bases Not in a motif group | geometric HL_5J7L_150 HL_89380.2 | |
HL_4V9P_120 | 1/CA/611:617 | No text annotation Not in a motif group | homologous HL_5J7L_151 HL_90617.2 | |
HL_4V9P_121 | 1/CA/629:634 | GNRA Not in a motif group | homologous HL_5J7L_152 HL_42097.1 | |
HL_4V9P_122 | 1/CA/641:647 | No text annotation Not in a motif group | homologous HL_5J7L_153 HL_77805.2 | |
HL_4V9P_123 | 1/CA/712:719 | No text annotation Not in a motif group | homologous HL_5J7L_154 HL_84085.2 | |
HL_4V9P_124 | 1/CA/744:753 | No text annotation Not in a motif group | homologous HL_4WF9_023 HL_39334.6 | |
HL_4V9P_125 | 1/CA/779:785 | No text annotation Not in a motif group | homologous HL_7A0S_023 HL_27930.1 | |
HL_4V9P_126 | 1/CA/826:831 | No text annotation Not in a motif group | homologous HL_5J7L_157 HL_64365.1 | |
HL_4V9P_128 | 1/CA/955:962 | GNRA Not in a motif group | homologous HL_4WF9_027 HL_42097.1 | |
HL_4V9P_129 | 1/CA/978:985 | No text annotation Not in a motif group | homologous HL_7A0S_027 HL_64430.2 | |
HL_4V9P_130 | 1/CA/1064:1074 | No text annotation Not in a motif group | homologous HL_6PRV_001 HL_07145.1 | |
HL_4V9P_131 | 1/CA/1092:1099 | No text annotation Not in a motif group | homologous HL_6PRV_002 HL_84085.2 | |
HL_4V9P_132 | 1/CA/1172:1177 | No text annotation Not in a motif group | geometric HL_4V88_198 HL_56691.2 | |
HL_4V9P_133 | 1/CA/1222:1227 | Other HL Not in a motif group | homologous HL_5J7L_164 HL_87030.2 | |
HL_4V9P_134 | 1/CA/1281:1289 | T-loop with 2 stacked bulged bases Not in a motif group | homologous HL_5J7L_165 HL_89380.2 | |
HL_4V9P_135 | 1/CA/1324:1330 | No text annotation Not in a motif group | homologous HL_5J7L_166 HL_46680.1 | |
HL_4V9P_136 | 1/CA/1363:1368 | Other HL Not in a motif group | homologous HL_5J7L_167 HL_87030.2 | |
HL_4V9P_137 | 1/CA/1389:1398 | No text annotation Not in a motif group | homologous HL_5J7L_168 HL_69023.2 | |
HL_4V9P_138 | 1/CA/1451:1459 | No text annotation Not in a motif group | geometric HL_6U8D_003 HL_89098.1 | |
HL_4V9P_139 | 1/CA/1492:1498 | No text annotation Not in a motif group | homologous HL_5J7L_170 HL_46680.1 | |
HL_4V9P_140 | 1/CA/1533:1538 | UNCG Not in a motif group | homologous HL_5J7L_171 HL_03562.2 | |
HL_4V9P_141 | 1/CA/1565:1568 | No text annotation Not in a motif group | homologous HL_7A0S_039 HL_38927.2 | |
HL_4V9P_142 | 1/CA/1612:1619 | No text annotation Not in a motif group | homologous HL_4WF9_038 HL_64430.2 | |
HL_4V9P_143 | 1/CA/1630:1636 | GNRA with one bulged base Not in a motif group | homologous HL_5J7L_174 HL_42097.1 | |
HL_4V9P_144 | 1/CA/1691:1696 | UNCG Not in a motif group | homologous HL_5J7L_175 HL_03562.2 | |
HL_4V9P_145 | 1/CA/1720:1740 | No text annotation Not in a motif group | ||
HL_4V9P_146 | 1/CA/1752:1756 | No text annotation Not in a motif group | homologous HL_5J7L_177 HL_76539.2 | |
HL_4V9P_147 | 1/CA/1777:1787 | No text annotation Not in a motif group | homologous HL_5J7L_178 HL_43613.5 | |
HL_4V9P_148 | 1/CA/1806:1811 | No text annotation Not in a motif group | homologous HL_5J7L_179 HL_42097.1 | |
HL_4V9P_149 | 1/CA/1868:1873 | Other HL Not in a motif group | homologous HL_5J7L_180 HL_42097.1 | |
HL_4V9P_150 | 1/CA/1910:1920 | No text annotation Not in a motif group | geometric HL_5TBW_049 HL_71924.2 | |
HL_4V9P_151 | 1/CA/1949:1957 | No text annotation Not in a motif group | homologous HL_7RQB_049 HL_51824.1 | |
HL_4V9P_152 | 1/CA/2027:2036 | No text annotation Not in a motif group | homologous HL_4WF9_047 HL_90642.6 | |
HL_4V9P_154 | 1/CA/2209:2215 | No text annotation Not in a motif group | homologous HL_5J7L_185 HL_16845.6 | |
HL_4V9P_155 | 1/CA/2248:2256 | No text annotation Not in a motif group | homologous HL_7RQB_053 NA | |
HL_4V9P_156 | 1/CA/2264:2276 | No text annotation Not in a motif group | homologous HL_5J7L_187 HL_19870.6 | |
HL_4V9P_157 | 1/CA/2303:2313 | No text annotation Not in a motif group | homologous HL_7RQB_055 HL_11805.3 | |
HL_4V9P_158 | 1/CA/2324:2331 | No text annotation Not in a motif group | homologous HL_5J7L_189 HL_12078.2 | |
HL_4V9P_159 | 1/CA/2356:2361 | Other HL Not in a motif group | homologous HL_5J7L_190 HL_87030.2 | |
HL_4V9P_160 | 1/CA/2374:2379 | GNRA Not in a motif group | homologous HL_5J7L_191 HL_42097.1 | |
HL_4V9P_161 | 1/CA/2404:2413 | No text annotation Not in a motif group | homologous HL_5J7L_192 HL_30784.2 | |
HL_4V9P_162 | 1/CA/2471:2479 | No text annotation Not in a motif group | homologous HL_5J7L_193 HL_06192.2 | |
HL_4V9P_163 | 1/CA/2528:2535 | No text annotation Not in a motif group | homologous HL_5J7L_194 HL_88526.2 | |
HL_4V9P_164 | 1/CA/2551:2557 | No text annotation Not in a motif group | homologous HL_4WF9_058 HL_43656.2 | |
HL_4V9P_165 | 1/CA/2594:2599 | GNRA Not in a motif group | homologous HL_5J7L_196 HL_42097.1 | |
HL_4V9P_166 | 1/CA/2658:2663 | No text annotation Not in a motif group | homologous HL_7RQB_064 HL_42097.1 | |
HL_4V9P_167 | 1/CA/2701:2706 | Ribsomal LSU H95 Not in a motif group | homologous HL_5J7L_198 HL_46680.1 | |
HL_4V9P_168 | 1/CA/2745:2759 | No text annotation Not in a motif group | homologous HL_5J7L_199 HL_56677.7 | |
HL_4V9P_169 | 1/CA/2796:2799 | No text annotation Not in a motif group | geometric HL_4V88_192 HL_53837.1 | |
HL_4V9P_170 | 1/CA/2819:2827 | No text annotation Not in a motif group | homologous HL_5J7L_201 HL_27930.1 | |
HL_4V9P_171 | 1/CA/2856:2861 | No text annotation Not in a motif group | homologous HL_7A0S_068 HL_42097.1 | |
HL_4V9P_172 | 1/CB/38:44 | No text annotation Not in a motif group | homologous HL_7RQB_070 HL_87939.1 | |
HL_4V9P_173 | 1/CB/86:90 | No text annotation Not in a motif group | homologous HL_5J7L_204 HL_38927.2 | |
HL_4V9P_174 | 1/DA/12:22 | No text annotation Not in a motif group | homologous HL_5J7L_001 HL_89881.2 | |
HL_4V9P_175 | 1/DA/76:93 | No text annotation Not in a motif group | ||
HL_4V9P_176 | 1/DA/158:163 | GNRA Not in a motif group | homologous HL_5J7L_003 HL_42097.1 | |
HL_4V9P_177 | 1/DA/186:191 | GNRA Not in a motif group | homologous HL_5J7L_004 HL_42097.1 | |
HL_4V9P_178 | 1/DA/207:212 | No text annotation Not in a motif group | ||
HL_4V9P_179 | 1/DA/259:267 | No text annotation Not in a motif group | homologous HL_5J7L_006 HL_69023.2 | |
HL_4V9P_180 | 1/DA/295:302 | No text annotation Not in a motif group | geometric HL_7A0S_056 HL_84085.2 | |
HL_4V9P_181 | 1/DA/320:333 | No text annotation Not in a motif group | homologous HL_5J7L_008 HL_81205.2 | |
HL_4V9P_182 | 1/DA/342:347 | UNCG Not in a motif group | homologous HL_5J7L_009 HL_03562.2 | |
HL_4V9P_183 | 1/DA/379:384 | GNRA Not in a motif group | homologous HL_5J7L_010 HL_42097.1 | |
HL_4V9P_184 | 1/DA/419:424 | UNCG Not in a motif group | homologous HL_4LFB_011 HL_03562.2 | |
HL_4V9P_185 | 1/DA/459:473 | No text annotation Not in a motif group | ||
HL_4V9P_186 | 1/DA/522:527 | No text annotation Not in a motif group | geometric HL_4WF9_003 HL_75407.1 | |
HL_4V9P_187 | 1/DA/617:623 | No text annotation Not in a motif group | homologous HL_4LFB_014 HL_26881.1 | |
HL_4V9P_188 | 1/DA/689:698 | No text annotation Not in a motif group | homologous HL_5J7L_015 HL_12326.1 | |
HL_4V9P_189 | 1/DA/726:731 | Other HL Not in a motif group | homologous HL_5J7L_016 HL_87030.2 | |
HL_4V9P_190 | 1/DA/786:796 | No text annotation Not in a motif group | homologous HL_5J7L_017 HL_12326.1 | |
HL_4V9P_191 | 1/DA/840:846 | No text annotation Not in a motif group | ||
HL_4V9P_192 | 1/DA/862:867 | GNRA Not in a motif group | homologous HL_4LFB_019 HL_42097.1 | |
HL_4V9P_193 | 1/DA/897:902 | GNRA Not in a motif group | homologous HL_4LFB_020 HL_42097.1 | |
HL_4V9P_194 | 1/DA/963:972 | No text annotation Not in a motif group | homologous HL_5J7L_021 NA | |
HL_4V9P_195 | 1/DA/1012:1017 | GNRA Not in a motif group | homologous HL_4LFB_022 HL_42097.1 | |
HL_4V9P_196 | 1/DA/1028:1033 | No text annotation Not in a motif group | geometric HL_4YAZ_004 HL_56691.2 | |
HL_4V9P_197 | 1/DA/1076:1081 | GNRA Not in a motif group | homologous HL_5J7L_023 HL_42097.1 | |
HL_4V9P_198 | 1/DA/1089:1096 | No text annotation Not in a motif group | homologous HL_4LFB_025 HL_71554.2 | |
HL_4V9P_199 | 1/DA/1134:1140 | No text annotation Not in a motif group | homologous HL_5J7L_025 HL_03562.2 | |
HL_4V9P_200 | 1/DA/1165:1171 | No text annotation Not in a motif group | homologous HL_5J7L_026 HL_90617.2 | |
HL_4V9P_201 | 1/DA/1265:1270 | GNRA Not in a motif group | homologous HL_5J7L_027 HL_42097.1 | |
HL_4V9P_202 | 1/DA/1314:1323 | No text annotation Not in a motif group | homologous HL_4LFB_029 HL_89380.2 | |
HL_4V9P_203 | 1/DA/1356:1366 | No text annotation Not in a motif group | homologous HL_4LFB_030 HL_96366.1 | |
HL_4V9P_204 | 1/DA/1449:1454 | UNCG Not in a motif group | homologous HL_4LFB_031 HL_03562.2 | |
HL_4V9P_205 | 1/DA/1515:1520 | No text annotation Not in a motif group | homologous HL_6CZR_103 NA | |
HL_4V9P_206 | 1/EA/59:68 | No text annotation Not in a motif group | homologous HL_5J7L_134 HL_18177.1 | |
HL_4V9P_207 | 1/EA/87:95 | No text annotation Not in a motif group | homologous HL_5J7L_135 HL_84193.1 | |
HL_4V9P_208 | 1/EA/123:128 | No text annotation Not in a motif group | homologous HL_4WF9_003 HL_75407.1 | |
HL_4V9P_209 | 1/EA/136:143 | No text annotation Not in a motif group | ||
HL_4V9P_210 | 1/EA/158:168 | No text annotation Not in a motif group | homologous HL_5J7L_138 HL_81820.1 | |
HL_4V9P_211 | 1/EA/194:201 | No text annotation Not in a motif group | geometric HL_5J7L_139 HL_06192.2 | |
HL_4V9P_212 | 1/EA/225:230 | No text annotation Not in a motif group | homologous HL_5J7L_140 HL_27930.1 | |
HL_4V9P_213 | 1/EA/246:252 | No text annotation Not in a motif group | homologous HL_7RQB_008 HL_67216.7 | |
HL_4V9P_214 | 1/EA/305:312 | T-loop with 1 bulged base Not in a motif group | homologous HL_5J7L_142 HL_89380.2 | |
HL_4V9P_215 | 1/EA/319:323 | No text annotation Not in a motif group | homologous HL_5J7L_143 HL_75407.1 | |
HL_4V9P_216 | 1/EA/327:335 | No text annotation Not in a motif group | homologous HL_4WF9_012 HL_08002.8 | |
HL_4V9P_217 | 1/EA/382:392 | No text annotation Not in a motif group | homologous HL_5J7L_145 HL_91503.4 | |
HL_4V9P_218 | 1/EA/410:417 | No text annotation Not in a motif group | homologous HL_5J7L_146 HL_96598.1 | |
HL_4V9P_219 | 1/EA/462:467 | No text annotation Not in a motif group | homologous HL_7RQB_015 HL_42097.1 | |
HL_4V9P_220 | 1/EA/487:493 | No text annotation Not in a motif group | homologous HL_5J7L_148 HL_42097.1 | |
HL_4V9P_221 | 1/EA/543:550 | No text annotation Not in a motif group | geometric HL_5J7L_149 HL_79531.1 | |
HL_4V9P_222 | 1/EA/566:575 | T-loop with 2 stacked bulged bases Not in a motif group | geometric HL_5J7L_150 HL_89380.2 | |
HL_4V9P_223 | 1/EA/611:617 | No text annotation Not in a motif group | homologous HL_5J7L_151 HL_90617.2 | |
HL_4V9P_224 | 1/EA/629:634 | GNRA Not in a motif group | homologous HL_5J7L_152 HL_42097.1 | |
HL_4V9P_225 | 1/EA/641:647 | No text annotation Not in a motif group | homologous HL_5J7L_153 HL_77805.2 | |
HL_4V9P_226 | 1/EA/712:719 | No text annotation Not in a motif group | homologous HL_5J7L_154 HL_84085.2 | |
HL_4V9P_227 | 1/EA/744:753 | No text annotation Not in a motif group | homologous HL_7A0S_022 HL_39334.6 | |
HL_4V9P_228 | 1/EA/779:785 | No text annotation Not in a motif group | homologous HL_7A0S_023 HL_27930.1 | |
HL_4V9P_229 | 1/EA/826:831 | No text annotation Not in a motif group | homologous HL_5J7L_157 HL_64365.1 | |
HL_4V9P_231 | 1/EA/955:962 | GNRA Not in a motif group | homologous HL_4WF9_027 HL_42097.1 | |
HL_4V9P_232 | 1/EA/978:985 | No text annotation Not in a motif group | homologous HL_5J7L_160 HL_64430.2 | |
HL_4V9P_233 | 1/EA/1064:1074 | No text annotation Not in a motif group | homologous HL_6PRV_001 HL_07145.1 | |
HL_4V9P_234 | 1/EA/1092:1099 | No text annotation Not in a motif group | homologous HL_6PRV_002 HL_84085.2 | |
HL_4V9P_235 | 1/EA/1172:1177 | No text annotation Not in a motif group | geometric HL_4V88_198 HL_56691.2 | |
HL_4V9P_236 | 1/EA/1222:1227 | Other HL Not in a motif group | homologous HL_5J7L_164 HL_87030.2 | |
HL_4V9P_237 | 1/EA/1281:1289 | T-loop with 2 stacked bulged bases Not in a motif group | homologous HL_5J7L_165 HL_89380.2 | |
HL_4V9P_238 | 1/EA/1324:1330 | No text annotation Not in a motif group | homologous HL_5J7L_166 HL_46680.1 | |
HL_4V9P_239 | 1/EA/1363:1368 | Other HL Not in a motif group | homologous HL_5J7L_167 HL_87030.2 | |
HL_4V9P_240 | 1/EA/1389:1398 | No text annotation Not in a motif group | homologous HL_5J7L_168 HL_69023.2 | |
HL_4V9P_241 | 1/EA/1451:1459 | No text annotation Not in a motif group | geometric HL_5J7L_169 HL_53837.1 | |
HL_4V9P_242 | 1/EA/1492:1498 | No text annotation Not in a motif group | homologous HL_5J7L_170 HL_46680.1 | |
HL_4V9P_243 | 1/EA/1533:1538 | UNCG Not in a motif group | homologous HL_5J7L_171 HL_03562.2 | |
HL_4V9P_244 | 1/EA/1565:1568 | No text annotation Not in a motif group | homologous HL_7RQB_039 HL_38927.2 | |
HL_4V9P_245 | 1/EA/1612:1619 | No text annotation Not in a motif group | homologous HL_4WF9_038 HL_64430.2 | |
HL_4V9P_246 | 1/EA/1630:1636 | GNRA with one bulged base Not in a motif group | homologous HL_5J7L_174 HL_42097.1 | |
HL_4V9P_247 | 1/EA/1691:1696 | UNCG Not in a motif group | homologous HL_5J7L_175 HL_03562.2 | |
HL_4V9P_248 | 1/EA/1728:1731 | No text annotation Not in a motif group | geometric HL_5J7L_176 HL_98426.1 | |
HL_4V9P_249 | 1/EA/1752:1756 | No text annotation Not in a motif group | homologous HL_5J7L_177 HL_76539.2 | |
HL_4V9P_250 | 1/EA/1777:1787 | No text annotation Not in a motif group | homologous HL_5J7L_178 HL_43613.5 | |
HL_4V9P_251 | 1/EA/1806:1811 | No text annotation Not in a motif group | homologous HL_5J7L_179 HL_42097.1 | |
HL_4V9P_252 | 1/EA/1868:1873 | Other HL Not in a motif group | homologous HL_5J7L_180 HL_42097.1 | |
HL_4V9P_253 | 1/EA/1910:1920 | No text annotation Not in a motif group | geometric HL_5TBW_049 HL_71924.2 | |
HL_4V9P_254 | 1/EA/1949:1957 | No text annotation Not in a motif group | homologous HL_4WF9_046 HL_51824.1 | |
HL_4V9P_255 | 1/EA/2027:2036 | No text annotation Not in a motif group | homologous HL_4WF9_047 HL_90642.6 | |
HL_4V9P_257 | 1/EA/2209:2215 | No text annotation Not in a motif group | homologous HL_5J7L_185 HL_16845.6 | |
HL_4V9P_258 | 1/EA/2248:2256 | No text annotation Not in a motif group | homologous HL_7RQB_053 NA | |
HL_4V9P_259 | 1/EA/2264:2276 | No text annotation Not in a motif group | homologous HL_5J7L_187 HL_19870.6 | |
HL_4V9P_260 | 1/EA/2303:2313 | No text annotation Not in a motif group | homologous HL_5J7L_188 HL_11805.3 | |
HL_4V9P_261 | 1/EA/2324:2331 | No text annotation Not in a motif group | homologous HL_5J7L_189 HL_12078.2 | |
HL_4V9P_262 | 1/EA/2356:2361 | Other HL Not in a motif group | homologous HL_5J7L_190 HL_87030.2 | |
HL_4V9P_263 | 1/EA/2374:2379 | GNRA Not in a motif group | homologous HL_5J7L_191 HL_42097.1 | |
HL_4V9P_264 | 1/EA/2404:2413 | No text annotation Not in a motif group | homologous HL_5J7L_192 HL_30784.2 | |
HL_4V9P_265 | 1/EA/2471:2479 | No text annotation Not in a motif group | homologous HL_5J7L_193 HL_06192.2 | |
HL_4V9P_266 | 1/EA/2528:2535 | No text annotation Not in a motif group | homologous HL_5J7L_194 HL_88526.2 | |
HL_4V9P_267 | 1/EA/2551:2557 | No text annotation Not in a motif group | homologous HL_4WF9_058 HL_43656.2 | |
HL_4V9P_268 | 1/EA/2594:2599 | GNRA Not in a motif group | homologous HL_5J7L_196 HL_42097.1 | |
HL_4V9P_269 | 1/EA/2658:2663 | No text annotation Not in a motif group | homologous HL_7RQB_064 HL_42097.1 | |
HL_4V9P_270 | 1/EA/2701:2706 | Ribsomal LSU H95 Not in a motif group | homologous HL_5J7L_198 HL_46680.1 | |
HL_4V9P_271 | 1/EA/2745:2759 | No text annotation Not in a motif group | homologous HL_5J7L_199 HL_56677.7 | |
HL_4V9P_272 | 1/EA/2796:2799 | No text annotation Not in a motif group | geometric HL_5TBW_068 HL_98426.1 | |
HL_4V9P_273 | 1/EA/2819:2827 | No text annotation Not in a motif group | homologous HL_5J7L_201 HL_27930.1 | |
HL_4V9P_274 | 1/EA/2856:2861 | No text annotation Not in a motif group | homologous HL_7A0S_068 HL_42097.1 | |
HL_4V9P_275 | 1/EB/38:44 | No text annotation Not in a motif group | homologous HL_7RQB_070 HL_87939.1 | |
HL_4V9P_276 | 1/EB/86:90 | No text annotation Not in a motif group | homologous HL_5J7L_204 HL_38927.2 | |
HL_4V9P_277 | 1/FA/12:22 | No text annotation Not in a motif group | homologous HL_5J7L_001 HL_89881.2 | |
HL_4V9P_279 | 1/FA/158:163 | GNRA Not in a motif group | homologous HL_5J7L_003 HL_42097.1 | |
HL_4V9P_280 | 1/FA/186:191 | GNRA Not in a motif group | homologous HL_5J7L_004 HL_42097.1 | |
HL_4V9P_281 | 1/FA/207:212 | No text annotation Not in a motif group | ||
HL_4V9P_282 | 1/FA/259:267 | No text annotation Not in a motif group | homologous HL_5J7L_006 HL_69023.2 | |
HL_4V9P_283 | 1/FA/296:301 | GNRA Not in a motif group | homologous HL_4LFB_007 HL_42097.1 | |
HL_4V9P_284 | 1/FA/320:333 | No text annotation Not in a motif group | homologous HL_5J7L_008 HL_81205.2 | |
HL_4V9P_285 | 1/FA/342:347 | UNCG Not in a motif group | homologous HL_5J7L_009 HL_03562.2 | |
HL_4V9P_286 | 1/FA/379:384 | GNRA Not in a motif group | homologous HL_5J7L_010 HL_42097.1 | |
HL_4V9P_287 | 1/FA/419:424 | UNCG Not in a motif group | homologous HL_4LFB_011 HL_03562.2 | |
HL_4V9P_288 | 1/FA/459:473 | No text annotation Not in a motif group | ||
HL_4V9P_289 | 1/FA/522:527 | No text annotation Not in a motif group | geometric HL_4YAZ_004 HL_56691.2 | |
HL_4V9P_290 | 1/FA/617:623 | No text annotation Not in a motif group | homologous HL_5J7L_014 HL_26881.1 | |
HL_4V9P_291 | 1/FA/689:698 | No text annotation Not in a motif group | homologous HL_5J7L_015 HL_12326.1 | |
HL_4V9P_292 | 1/FA/726:731 | Other HL Not in a motif group | homologous HL_5J7L_016 HL_87030.2 | |
HL_4V9P_293 | 1/FA/786:796 | No text annotation Not in a motif group | homologous HL_4LFB_017 HL_12326.1 | |
HL_4V9P_295 | 1/FA/862:867 | GNRA Not in a motif group | homologous HL_5J7L_019 HL_42097.1 | |
HL_4V9P_296 | 1/FA/897:902 | GNRA Not in a motif group | homologous HL_5J7L_020 HL_42097.1 | |
HL_4V9P_297 | 1/FA/963:972 | No text annotation Not in a motif group | homologous HL_5J7L_021 NA | |
HL_4V9P_298 | 1/FA/1012:1017 | GNRA Not in a motif group | homologous HL_4LFB_022 HL_42097.1 | |
HL_4V9P_299 | 1/FA/1028:1033 | No text annotation Not in a motif group | geometric HL_1WZ2_007 HL_10278.1 | |
HL_4V9P_300 | 1/FA/1076:1081 | GNRA Not in a motif group | homologous HL_4LFB_024 HL_42097.1 | |
HL_4V9P_301 | 1/FA/1089:1096 | No text annotation Not in a motif group | homologous HL_4LFB_025 HL_71554.2 | |
HL_4V9P_302 | 1/FA/1134:1140 | No text annotation Not in a motif group | homologous HL_5J7L_025 HL_03562.2 | |
HL_4V9P_303 | 1/FA/1165:1171 | No text annotation Not in a motif group | homologous HL_5J7L_026 HL_90617.2 | |
HL_4V9P_304 | 1/FA/1265:1270 | GNRA Not in a motif group | homologous HL_5J7L_027 HL_42097.1 | |
HL_4V9P_305 | 1/FA/1314:1323 | No text annotation Not in a motif group | homologous HL_4LFB_029 HL_89380.2 | |
HL_4V9P_306 | 1/FA/1356:1366 | No text annotation Not in a motif group | homologous HL_4LFB_030 HL_96366.1 | |
HL_4V9P_307 | 1/FA/1449:1454 | UNCG Not in a motif group | homologous HL_4LFB_031 HL_03562.2 | |
HL_4V9P_308 | 1/FA/1515:1520 | No text annotation Not in a motif group | homologous HL_4LFB_032 NA | |
HL_4V9P_309 | 1/GA/59:68 | No text annotation Not in a motif group | homologous HL_5J7L_134 HL_18177.1 | |
HL_4V9P_310 | 1/GA/87:95 | No text annotation Not in a motif group | homologous HL_5J7L_135 HL_84193.1 | |
HL_4V9P_311 | 1/GA/123:128 | No text annotation Not in a motif group | homologous HL_5J7L_136 HL_75407.1 | |
HL_4V9P_312 | 1/GA/136:143 | No text annotation Not in a motif group | ||
HL_4V9P_313 | 1/GA/158:168 | No text annotation Not in a motif group | homologous HL_5J7L_138 HL_81820.1 | |
HL_4V9P_314 | 1/GA/194:201 | No text annotation Not in a motif group | geometric HL_5J7L_139 HL_06192.2 | |
HL_4V9P_315 | 1/GA/225:230 | No text annotation Not in a motif group | homologous HL_5J7L_140 HL_27930.1 | |
HL_4V9P_316 | 1/GA/246:252 | No text annotation Not in a motif group | homologous HL_5J7L_141 HL_67216.7 | |
HL_4V9P_317 | 1/GA/305:312 | T-loop with 1 bulged base Not in a motif group | homologous HL_5J7L_142 HL_89380.2 | |
HL_4V9P_318 | 1/GA/319:323 | No text annotation Not in a motif group | homologous HL_5J7L_143 HL_75407.1 | |
HL_4V9P_319 | 1/GA/327:335 | No text annotation Not in a motif group | homologous HL_7RQB_012 HL_08002.8 | |
HL_4V9P_320 | 1/GA/382:392 | No text annotation Not in a motif group | homologous HL_5J7L_145 HL_91503.4 | |
HL_4V9P_321 | 1/GA/410:417 | No text annotation Not in a motif group | homologous HL_5J7L_146 HL_96598.1 | |
HL_4V9P_322 | 1/GA/462:467 | GNRA Not in a motif group | homologous HL_5J7L_147 HL_42097.1 | |
HL_4V9P_323 | 1/GA/487:493 | No text annotation Not in a motif group | homologous HL_5J7L_148 HL_42097.1 | |
HL_4V9P_324 | 1/GA/543:550 | No text annotation Not in a motif group | geometric HL_4V9F_003 HL_52841.1 | |
HL_4V9P_325 | 1/GA/566:575 | T-loop with 2 stacked bulged bases Not in a motif group | geometric HL_5J7L_150 HL_89380.2 | |
HL_4V9P_326 | 1/GA/611:617 | No text annotation Not in a motif group | homologous HL_5J7L_151 HL_90617.2 | |
HL_4V9P_327 | 1/GA/629:634 | GNRA Not in a motif group | homologous HL_5J7L_152 HL_42097.1 | |
HL_4V9P_328 | 1/GA/641:647 | No text annotation Not in a motif group | homologous HL_5J7L_153 HL_77805.2 | |
HL_4V9P_329 | 1/GA/712:719 | No text annotation Not in a motif group | homologous HL_5J7L_154 HL_84085.2 | |
HL_4V9P_330 | 1/GA/744:753 | No text annotation Not in a motif group | homologous HL_4WF9_023 HL_39334.6 | |
HL_4V9P_331 | 1/GA/779:785 | No text annotation Not in a motif group | homologous HL_7A0S_023 HL_27930.1 | |
HL_4V9P_332 | 1/GA/826:831 | No text annotation Not in a motif group | homologous HL_7RQB_025 HL_64365.1 | |
HL_4V9P_334 | 1/GA/955:962 | GNRA Not in a motif group | homologous HL_4WF9_027 HL_42097.1 | |
HL_4V9P_335 | 1/GA/978:985 | No text annotation Not in a motif group | homologous HL_7A0S_027 HL_64430.2 | |
HL_4V9P_336 | 1/GA/1063:1075 | No text annotation Not in a motif group | ||
HL_4V9P_337 | 1/GA/1092:1099 | No text annotation Not in a motif group | homologous HL_7RQB_030 NA | |
HL_4V9P_338 | 1/GA/1168:1181 | No text annotation Not in a motif group | ||
HL_4V9P_339 | 1/GA/1222:1227 | Other HL Not in a motif group | homologous HL_5J7L_164 HL_87030.2 | |
HL_4V9P_340 | 1/GA/1281:1289 | T-loop with 2 stacked bulged bases Not in a motif group | homologous HL_5J7L_165 HL_89380.2 | |
HL_4V9P_341 | 1/GA/1324:1330 | No text annotation Not in a motif group | homologous HL_5J7L_166 HL_46680.1 | |
HL_4V9P_342 | 1/GA/1363:1368 | Other HL Not in a motif group | homologous HL_5J7L_167 HL_87030.2 | |
HL_4V9P_343 | 1/GA/1389:1398 | No text annotation Not in a motif group | homologous HL_5J7L_168 HL_69023.2 | |
HL_4V9P_344 | 1/GA/1451:1459 | No text annotation Not in a motif group | homologous HL_5J7L_169 HL_53837.1 | |
HL_4V9P_345 | 1/GA/1492:1498 | No text annotation Not in a motif group | homologous HL_5J7L_170 HL_46680.1 | |
HL_4V9P_346 | 1/GA/1533:1538 | UNCG Not in a motif group | homologous HL_5J7L_171 HL_03562.2 | |
HL_4V9P_347 | 1/GA/1565:1568 | No text annotation Not in a motif group | homologous HL_7RQB_039 HL_38927.2 | |
HL_4V9P_348 | 1/GA/1612:1619 | No text annotation Not in a motif group | homologous HL_7RQB_040 HL_64430.2 | |
HL_4V9P_349 | 1/GA/1630:1636 | GNRA with one bulged base Not in a motif group | homologous HL_5J7L_174 HL_42097.1 | |
HL_4V9P_350 | 1/GA/1691:1696 | UNCG Not in a motif group | geometric HL_4LFB_011 HL_03562.2 | |
HL_4V9P_351 | 1/GA/1727:1733 | No text annotation Not in a motif group | ||
HL_4V9P_352 | 1/GA/1752:1756 | No text annotation Not in a motif group | homologous HL_5J7L_177 HL_76539.2 | |
HL_4V9P_353 | 1/GA/1777:1787 | No text annotation Not in a motif group | homologous HL_4WF9_043 HL_43613.5 | |
HL_4V9P_354 | 1/GA/1806:1811 | No text annotation Not in a motif group | homologous HL_5J7L_179 HL_42097.1 | |
HL_4V9P_355 | 1/GA/1868:1873 | No text annotation Not in a motif group | ||
HL_4V9P_356 | 1/GA/1910:1920 | No text annotation Not in a motif group | geometric HL_5TBW_049 HL_71924.2 | |
HL_4V9P_357 | 1/GA/1949:1957 | No text annotation Not in a motif group | homologous HL_5J7L_182 HL_51824.1 | |
HL_4V9P_358 | 1/GA/2027:2036 | No text annotation Not in a motif group | homologous HL_4WF9_047 HL_90642.6 | |
HL_4V9P_360 | 1/GA/2209:2215 | No text annotation Not in a motif group | homologous HL_5J7L_185 HL_16845.6 | |
HL_4V9P_361 | 1/GA/2248:2256 | No text annotation Not in a motif group | homologous HL_5J7L_186 NA | |
HL_4V9P_362 | 1/GA/2264:2276 | No text annotation Not in a motif group | homologous HL_7RQB_054 HL_19870.6 | |
HL_4V9P_363 | 1/GA/2303:2313 | No text annotation Not in a motif group | homologous HL_5J7L_188 HL_11805.3 | |
HL_4V9P_364 | 1/GA/2324:2331 | No text annotation Not in a motif group | homologous HL_5J7L_189 HL_12078.2 | |
HL_4V9P_365 | 1/GA/2356:2361 | Other HL Not in a motif group | homologous HL_5J7L_190 HL_87030.2 | |
HL_4V9P_366 | 1/GA/2374:2379 | GNRA Not in a motif group | homologous HL_5J7L_191 HL_42097.1 | |
HL_4V9P_367 | 1/GA/2404:2413 | No text annotation Not in a motif group | homologous HL_5J7L_192 HL_30784.2 | |
HL_4V9P_368 | 1/GA/2471:2479 | No text annotation Not in a motif group | homologous HL_5J7L_193 HL_06192.2 | |
HL_4V9P_369 | 1/GA/2528:2535 | No text annotation Not in a motif group | homologous HL_5J7L_194 HL_88526.2 | |
HL_4V9P_370 | 1/GA/2551:2557 | No text annotation Not in a motif group | homologous HL_4WF9_058 HL_43656.2 | |
HL_4V9P_371 | 1/GA/2594:2599 | GNRA Not in a motif group | homologous HL_5J7L_196 HL_42097.1 | |
HL_4V9P_372 | 1/GA/2658:2663 | No text annotation Not in a motif group | homologous HL_7RQB_064 HL_42097.1 | |
HL_4V9P_373 | 1/GA/2701:2706 | Ribsomal LSU H95 Not in a motif group | homologous HL_5J7L_198 HL_46680.1 | |
HL_4V9P_374 | 1/GA/2745:2759 | No text annotation Not in a motif group | homologous HL_5J7L_199 HL_56677.7 | |
HL_4V9P_375 | 1/GA/2796:2799 | No text annotation Not in a motif group | geometric HL_5B2T_002 HL_38927.2 | |
HL_4V9P_376 | 1/GA/2819:2827 | No text annotation Not in a motif group | homologous HL_5J7L_201 HL_27930.1 | |
HL_4V9P_377 | 1/GA/2856:2861 | Other HL Not in a motif group | homologous HL_5J7L_202 HL_42097.1 | |
HL_4V9P_378 | 1/GB/38:44 | No text annotation Not in a motif group | homologous HL_5J7L_203 HL_87939.1 | |
HL_4V9P_379 | 1/GB/86:90 | No text annotation Not in a motif group | homologous HL_5J7L_204 HL_38927.2 | |
HL_4V9P_380 | 1/HA/12:22 | No text annotation Not in a motif group | homologous HL_4LFB_001 HL_89881.2 | |
HL_4V9P_381 | 1/HA/78:91 | No text annotation Not in a motif group | ||
HL_4V9P_382 | 1/HA/158:163 | GNRA Not in a motif group | homologous HL_4LFB_003 HL_42097.1 | |
HL_4V9P_383 | 1/HA/186:191 | GNRA Not in a motif group | homologous HL_5J7L_004 HL_42097.1 | |
HL_4V9P_384 | 1/HA/207:212 | UNCG Not in a motif group | homologous HL_5J7L_005 HL_03562.2 | |
HL_4V9P_385 | 1/HA/259:267 | No text annotation Not in a motif group | homologous HL_5J7L_006 HL_69023.2 | |
HL_4V9P_386 | 1/HA/296:301 | GNRA Not in a motif group | homologous HL_5J7L_007 HL_42097.1 | |
HL_4V9P_387 | 1/HA/320:333 | No text annotation Not in a motif group | homologous HL_5J7L_008 HL_81205.2 | |
HL_4V9P_388 | 1/HA/342:347 | UNCG Not in a motif group | homologous HL_5J7L_009 HL_03562.2 | |
HL_4V9P_389 | 1/HA/379:384 | GNRA Not in a motif group | homologous HL_5J7L_010 HL_42097.1 | |
HL_4V9P_390 | 1/HA/419:424 | UNCG Not in a motif group | homologous HL_5J7L_011 HL_03562.2 | |
HL_4V9P_391 | 1/HA/462:470 | No text annotation Not in a motif group | geometric HL_5J7L_012 HL_84085.2 | |
HL_4V9P_392 | 1/HA/522:527 | No text annotation Not in a motif group | geometric HL_4WF9_003 HL_75407.1 | |
HL_4V9P_393 | 1/HA/617:623 | No text annotation Not in a motif group | homologous HL_5J7L_014 HL_26881.1 | |
HL_4V9P_394 | 1/HA/689:698 | No text annotation Not in a motif group | homologous HL_5J7L_015 HL_12326.1 | |
HL_4V9P_395 | 1/HA/726:731 | Other HL Not in a motif group | homologous HL_5J7L_016 HL_87030.2 | |
HL_4V9P_396 | 1/HA/786:796 | No text annotation Not in a motif group | homologous HL_5J7L_017 HL_12326.1 | |
HL_4V9P_398 | 1/HA/862:867 | GNRA Not in a motif group | homologous HL_5J7L_019 HL_42097.1 | |
HL_4V9P_399 | 1/HA/897:902 | GNRA Not in a motif group | homologous HL_5J7L_020 HL_42097.1 | |
HL_4V9P_400 | 1/HA/963:972 | No text annotation Not in a motif group | homologous HL_5J7L_021 NA | |
HL_4V9P_401 | 1/HA/1009:1020 | No text annotation Not in a motif group | ||
HL_4V9P_402 | 1/HA/1076:1081 | GNRA Not in a motif group | homologous HL_5J7L_023 HL_42097.1 | |
HL_4V9P_403 | 1/HA/1089:1096 | No text annotation Not in a motif group | homologous HL_4LFB_025 HL_71554.2 | |
HL_4V9P_404 | 1/HA/1133:1141 | No text annotation Not in a motif group | geometric HL_5TBW_021 HL_33817.1 | |
HL_4V9P_405 | 1/HA/1165:1171 | No text annotation Not in a motif group | homologous HL_5J7L_026 HL_90617.2 | |
HL_4V9P_406 | 1/HA/1265:1270 | GNRA Not in a motif group | homologous HL_5J7L_027 HL_42097.1 | |
HL_4V9P_407 | 1/HA/1314:1323 | No text annotation Not in a motif group | geometric HL_5J7L_028 HL_89380.2 | |
HL_4V9P_408 | 1/HA/1356:1366 | No text annotation Not in a motif group | homologous HL_4LFB_030 HL_96366.1 | |
HL_4V9P_409 | 1/HA/1449:1454 | No text annotation Not in a motif group | geometric HL_2Y9H_003 HL_16173.1 | |
HL_4V9P_410 | 1/HA/1515:1520 | No text annotation Not in a motif group | homologous HL_6CZR_103 NA |
Problematic loops
# | loop id | Problem | Sequence |
---|---|---|---|
HL_4V9P_025 | No text annotation | ||
HL_4V9P_051 | No text annotation | ||
HL_4V9P_073 | No text annotation | ||
HL_4V9P_076 | UNCG | ||
HL_4V9P_083 | No text annotation | ||
HL_4V9P_089 | No text annotation | ||
HL_4V9P_097 | No text annotation | ||
HL_4V9P_127 | No text annotation | ||
HL_4V9P_153 | No text annotation | ||
HL_4V9P_230 | No text annotation | ||
HL_4V9P_256 | No text annotation | ||
HL_4V9P_278 | No text annotation | ||
HL_4V9P_294 | No text annotation | ||
HL_4V9P_333 | No text annotation | ||
HL_4V9P_359 | No text annotation | ||
HL_4V9P_397 | No text annotation |
Valid loops
3D | Loop id | Location | Annotation; motif group | Mapped info |
---|---|---|---|---|
IL_4V9P_001 | 1/AA/24:30, 1/AA/510:516 | Triple sheared with non-canonical cWW Not in a motif group | homologous IL_5J7L_245 IL_66414.6 | |
IL_4V9P_002 | 1/AA/36:37, 1/AA/442:444 | Single bulged A Not in a motif group | homologous IL_5J7L_246 IL_37497.2 | |
IL_4V9P_003 | 1/AA/43:44, 1/AA/434:436 | Minor groove platform Not in a motif group | homologous IL_5J7L_247 IL_42622.2 | |
IL_4V9P_004 | 1/AA/81:85, 1/AA/97:105 | No text annotation Not in a motif group | homologous IL_5J7L_248 IL_93699.1 | |
IL_4V9P_006 | 1/AA/183:184, 1/AA/212:214 | Single stack bend Not in a motif group | homologous IL_5J7L_249 IL_76488.2 | |
IL_4V9P_007 | 1/AA/188:194, 1/AA/201:208 | 8x7 Sarcin-Ricin; G-bulge Not in a motif group | geometric IL_5J7L_250 IL_04346.7 | |
IL_4V9P_008 | 1/AA/239:245, 1/AA/253:258 | 7x6 Sarcin-Ricin; G-bulge Not in a motif group | homologous IL_5J7L_251 IL_76042.2 | |
IL_4V9P_009 | 1/AA/269:271, 1/AA/366:370 | No text annotation Not in a motif group | homologous IL_5J7L_252 IL_47972.1 | |
IL_4V9P_010 | 1/AA/274:281, 1/AA/359:363 | No text annotation Not in a motif group | homologous IL_5J7L_253 IL_77870.1 | |
IL_4V9P_012 | 1/AA/293:295, 1/AA/343:347 | No text annotation Not in a motif group | homologous IL_5J7L_254 IL_69440.1 | |
IL_4V9P_013 | 1/AA/481:484, 1/AA/496:509 | No text annotation Not in a motif group | homologous IL_5J7L_255 IL_60992.6 | |
IL_4V9P_014 | 1/AA/536:539, 1/AA/554:557 | Double sheared Not in a motif group | homologous IL_5J7L_256 IL_09705.9 | |
IL_4V9P_015 | 1/AA/564:566, 1/AA/575:577 | No text annotation Not in a motif group | homologous IL_5J7L_257 IL_95997.1 | |
IL_4V9P_016 | 1/AA/606:610, 1/AA/618:622 | AAA cross-strand stack Not in a motif group | homologous IL_5J7L_258 IL_17136.1 | |
IL_4V9P_017 | 1/AA/672:674, 1/AA/806:808 | No text annotation Not in a motif group | homologous IL_7RQB_017 IL_95997.1 | |
IL_4V9P_018 | 1/AA/674:678, 1/AA/799:806 | tHW-tHW cross-strand stack Not in a motif group | geometric IL_5J7L_260 IL_17470.6 | |
IL_4V9P_020 | 1/AA/697:698, 1/AA/763:765 | Single bulged A Not in a motif group | homologous IL_5J7L_261 IL_37497.2 | |
IL_4V9P_021 | 1/AA/702:703, 1/AA/728:730 | Single bulged G Not in a motif group | homologous IL_5J7L_262 IL_00225.2 | |
IL_4V9P_022 | 1/AA/703:707, 1/AA/724:728 | Triple sheared Not in a motif group | geometric IL_4WF9_024 IL_56467.8 | |
IL_4V9P_023 | 1/AA/738:740, 1/AA/757:758 | Major groove platform Not in a motif group | homologous IL_5J7L_264 IL_27635.1 | |
IL_4V9P_024 | 1/AA/775:777, 1/AA/787:791 | Multiple bulged bases Not in a motif group | homologous IL_7RQB_023 IL_90991.6 | |
IL_4V9P_025 | 1/AA/837:838, 1/AA/940:942 | Single stack bend Not in a motif group | homologous IL_4WF9_028 IL_92001.1 | |
IL_4V9P_026 | 1/AA/844:847, 1/AA/933:934 | Other IL Not in a motif group | homologous IL_5J7L_267 IL_92001.1 | |
IL_4V9P_027 | 1/AA/847:848, 1/AA/930:933 | Stack outside cWW Not in a motif group | geometric IL_5J7L_268 IL_37629.1 | |
IL_4V9P_028 | 1/AA/850:851, 1/AA/926:928 | Single stack bend Not in a motif group | homologous IL_5J7L_269 IL_76488.2 | |
IL_4V9P_029 | 1/AA/856:862, 1/AA/915:921 | 7x7 Sarcin-Ricin with intercalated A; G-bulge Not in a motif group | homologous IL_5J7L_270 IL_93830.3 | |
IL_4V9P_030 | 1/AA/862:863, 1/AA/913:915 | Single bulged G Not in a motif group | geometric IL_5J7L_271 IL_00225.2 | |
IL_4V9P_031 | 1/AA/864:868, 1/AA/909:912 | C-loop Not in a motif group | homologous IL_5J7L_272 IL_63596.6 | |
IL_4V9P_032 | 1/AA/870:872, 1/AA/905:907 | No text annotation Not in a motif group | homologous IL_5J7L_273 IL_95997.1 | |
IL_4V9P_033 | 1/AA/875:879, 1/AA/898:902 | Triple sheared Not in a motif group | homologous IL_5J7L_274 IL_56467.8 | |
IL_4V9P_034 | 1/AA/880:881, 1/AA/895:897 | No text annotation Not in a motif group | homologous IL_5J7L_275 NA | |
IL_4V9P_035 | 1/AA/994:996, 1/AA/1159:1160 | Single bulged C Not in a motif group | homologous IL_5J7L_276 IL_61258.12 | |
IL_4V9P_036 | 1/AA/998:1002, 1/AA/1153:1157 | UAA/GAN Not in a motif group | homologous IL_4WF9_036 IL_89002.2 | |
IL_4V9P_037 | 1/AA/1004:1011, 1/AA/1150:1151 | SSU/LSU pseudoknot Not in a motif group | geometric IL_5J7L_278 IL_15861.7 | |
IL_4V9P_038 | 1/AA/1011:1013, 1/AA/1149:1150 | Single bulged U Not in a motif group | homologous IL_5J7L_279 IL_83039.13 | |
IL_4V9P_039 | 1/AA/1018:1024, 1/AA/1140:1144 | No text annotation Not in a motif group | geometric IL_4WF9_039 IL_57188.3 | |
IL_4V9P_040 | 1/AA/1024:1030, 1/AA/1124:1140 | No text annotation Not in a motif group | geometric IL_5J7L_281 IL_50715.1 | |
IL_4V9P_041 | 1/AA/1031:1034, 1/AA/1121:1123 | Isolated non-canonical cWW with bulges Not in a motif group | homologous IL_5J7L_282 IL_82068.2 | |
IL_4V9P_042 | 1/AA/1038:1041, 1/AA/1114:1117 | Tandem non-canonical cWW pairs Not in a motif group | homologous IL_5J7L_283 IL_30621.2 | |
IL_4V9P_043 | 1/AA/1043:1051, 1/AA/1108:1112 | Kink-turn Not in a motif group | homologous IL_5J7L_284 IL_90538.4 | |
IL_4V9P_044 | 1/AA/1059:1062, 1/AA/1076:1079 | No text annotation Not in a motif group | homologous IL_5J7L_285 IL_23544.2 | |
IL_4V9P_045 | 1/AA/1087:1090, 1/AA/1101:1102 | No text annotation Not in a motif group | homologous IL_6PRV_002 NA | |
IL_4V9P_047 | 1/AA/1196:1198, 1/AA/1247:1250 | Isolated cWS basepair Not in a motif group | homologous IL_5J7L_286 IL_52767.2 | |
IL_4V9P_048 | 1/AA/1202:1206, 1/AA/1240:1243 | No text annotation Not in a motif group | homologous IL_5J7L_287 IL_91920.1 | |
IL_4V9P_049 | 1/AA/1208:1215, 1/AA/1234:1238 | Kink-turn Not in a motif group | homologous IL_5J7L_288 IL_70923.2 | |
IL_4V9P_050 | 1/AA/1262:1269, 1/AA/2011:2017 | 8x7 Sarcin-Ricin; G-bulge Not in a motif group | homologous IL_5J7L_289 IL_04346.7 | |
IL_4V9P_051 | 1/AA/1310:1313, 1/AA/1603:1604 | Major groove platform; stack outside cWW Not in a motif group | homologous IL_7RQB_050 IL_50694.2 | |
IL_4V9P_052 | 1/AA/1319:1323, 1/AA/1331:1333 | C-loop Not in a motif group | homologous IL_5J7L_291 IL_63596.6 | |
IL_4V9P_053 | 1/AA/1351:1355, 1/AA/1376:1380 | UAA/GAN Not in a motif group | homologous IL_5J7L_292 IL_89002.2 | |
IL_4V9P_054 | 1/AA/1357:1361, 1/AA/1370:1374 | tSH-tHW-tHS Not in a motif group | homologous IL_5J7L_293 IL_17136.1 | |
IL_4V9P_055 | 1/AA/1415:1416, 1/AA/1582:1587 | No text annotation Not in a motif group | homologous IL_5J7L_294 IL_90348.1 | |
IL_4V9P_056 | 1/AA/1417:1421, 1/AA/1577:1581 | UAA/GAN Not in a motif group | homologous IL_5J7L_295 IL_89002.2 | |
IL_4V9P_057 | 1/AA/1432:1435, 1/AA/1557:1561 | Tandem non-canonical cWW pairs Not in a motif group | homologous IL_5J7L_296 IL_55178.1 | |
IL_4V9P_058 | 1/AA/1437:1440, 1/AA/1551:1555 | tSH-tHW Not in a motif group | homologous IL_5J7L_297 IL_04059.1 | |
IL_4V9P_059 | 1/AA/1450:1451, 1/AA/1459:1461 | Single bulged U Not in a motif group | homologous IL_5J7L_298 IL_83039.13 | |
IL_4V9P_060 | 1/AA/1468:1471, 1/AA/1520:1524 | No text annotation Not in a motif group | homologous IL_5J7L_299 IL_68574.2 | |
IL_4V9P_061 | 1/AA/1474:1479, 1/AA/1512:1517 | No text annotation Not in a motif group | ||
IL_4V9P_062 | 1/AA/1481:1482, 1/AA/1507:1510 | No text annotation Not in a motif group | homologous IL_5J7L_301 IL_67474.4 | |
IL_4V9P_063 | 1/AA/1489:1491, 1/AA/1499:1500 | Single bulged A Not in a motif group | homologous IL_5J7L_302 IL_37497.2 | |
IL_4V9P_064 | 1/AA/1526:1529, 1/AA/1542:1546 | UAA/GAN variation Not in a motif group | homologous IL_5J7L_303 IL_07235.1 | |
IL_4V9P_065 | 1/AA/1651:1656, 1/AA/2004:2006 | No text annotation Not in a motif group | homologous IL_5J7L_304 IL_12566.2 | |
IL_4V9P_066 | 1/AA/1663:1665, 1/AA/1995:1997 | Isolated tWW turn Not in a motif group | homologous IL_5J7L_305 IL_54997.7 | |
IL_4V9P_067 | 1/AA/1666:1669, 1/AA/1993:1994 | Major groove platform; stack outside cWW Not in a motif group | geometric IL_7RQB_066 IL_50694.2 | |
IL_4V9P_068 | 1/AA/1669:1674, 1/AA/1990:1993 | Intercalated tWH Not in a motif group | homologous IL_5J7L_307 IL_82842.2 | |
IL_4V9P_069 | 1/AA/1686:1691, 1/AA/1696:1702 | tSH-tSH-tHH-tHS Not in a motif group | geometric IL_5J7L_308 IL_65969.2 | |
IL_4V9P_070 | 1/AA/1712:1718, 1/AA/1742:1746 | 6x5 Sarcin-Ricin; G-bulge Not in a motif group | homologous IL_5J7L_309 IL_88269.3 | |
IL_4V9P_071 | 1/AA/1720:1724, 1/AA/1736:1740 | Triple sheared Not in a motif group | geometric IL_5J7L_310 IL_56467.8 | |
IL_4V9P_072 | 1/AA/1770:1771, 1/AA/1980:1982 | Single bulged A Not in a motif group | homologous IL_5J7L_312 IL_37497.2 | |
IL_4V9P_073 | 1/AA/1798:1804, 1/AA/1813:1821 | Kink-turn related Not in a motif group | homologous IL_5J7L_313 IL_17069.3 | |
IL_4V9P_074 | 1/AA/1837:1840, 1/AA/1902:1903 | Major groove outside cWW, minor groove, intercalation pocket Not in a motif group | homologous IL_5J7L_314 IL_88739.1 | |
IL_4V9P_075 | 1/AA/1841:1842, 1/AA/1898:1901 | Major groove outside cWW, minor groove, intercalation pocket Not in a motif group | homologous IL_5J7L_315 IL_16396.2 | |
IL_4V9P_076 | 1/AA/1846:1849, 1/AA/1893:1894 | Minor groove platform Not in a motif group | homologous IL_7RQB_073 IL_88739.1 | |
IL_4V9P_077 | 1/AA/1864:1867, 1/AA/1874:1878 | UAA/GAN related Not in a motif group | homologous IL_5J7L_317 IL_77691.1 | |
IL_4V9P_078 | 1/AA/1933:1934, 1/AA/1964:1967 | Multiple bulged bases Not in a motif group | homologous IL_5J7L_318 IL_59677.2 | |
IL_4V9P_079 | 1/AA/1934:1945, 1/AA/1961:1964 | No text annotation Not in a motif group | geometric IL_7A0S_072 IL_81589.2 | |
IL_4V9P_080 | 1/AA/2050:2052, 1/AA/2617:2618 | Major groove platform Not in a motif group | homologous IL_5J7L_320 IL_27635.1 | |
IL_4V9P_082 | 1/AA/2054:2056, 1/AA/2612:2615 | No text annotation Not in a motif group | homologous IL_5J7L_321 IL_54678.5 | |
IL_4V9P_083 | 1/AA/2067:2069, 1/AA/2442:2443 | Single bulged U Not in a motif group | homologous IL_7A0S_075 IL_83039.13 | |
IL_4V9P_084 | 1/AA/2070:2071, 1/AA/2438:2441 | Minor groove platform Not in a motif group | homologous IL_7RQB_081 IL_42622.2 | |
IL_4V9P_085 | 1/AA/2081:2083, 1/AA/2236:2239 | Isolated tHS basepair with bulges Not in a motif group | homologous IL_5J7L_325 IL_38958.7 | |
IL_4V9P_086 | 1/AA/2085:2087, 1/AA/2232:2234 | No text annotation Not in a motif group | homologous IL_7A0S_078 IL_95997.1 | |
IL_4V9P_087 | 1/AA/2202:2204, 1/AA/2220:2221 | Single bulged U Not in a motif group | homologous IL_5J7L_331 IL_83039.13 | |
IL_4V9P_088 | 1/AA/2350:2353, 1/AA/2364:2367 | Double sheared Not in a motif group | homologous IL_5J7L_333 IL_09705.9 | |
IL_4V9P_089 | 1/AA/2401:2403, 1/AA/2414:2415 | No text annotation Not in a motif group | ||
IL_4V9P_090 | 1/AA/2453:2454, 1/AA/2498:2500 | Single stack bend Not in a motif group | geometric IL_4WF9_089 IL_76488.2 | |
IL_4V9P_091 | 1/AA/2454:2455, 1/AA/2496:2498 | Major groove platform Not in a motif group | homologous IL_7RQB_092 IL_27635.1 | |
IL_4V9P_092 | 1/AA/2457:2459, 1/AA/2493:2494 | Major groove platform Not in a motif group | geometric IL_4WF9_091 IL_27635.1 | |
IL_4V9P_093 | 1/AA/2459:2461, 1/AA/2489:2493 | Major groove minor groove platform with extra cWW Not in a motif group | homologous IL_5J7L_337 IL_92788.2 | |
IL_4V9P_094 | 1/AA/2466:2470, 1/AA/2480:2484 | Triple sheared Not in a motif group | homologous IL_5J7L_338 IL_56467.8 | |
IL_4V9P_095 | 1/AA/2507:2508, 1/AA/2580:2582 | Major groove platform Not in a motif group | homologous IL_7RQB_096 IL_76223.2 | |
IL_4V9P_096 | 1/AA/2510:2512, 1/AA/2574:2578 | Isolated non-canonical cWW with bulges Not in a motif group | geometric IL_5J7L_340 IL_90933.2 | |
IL_4V9P_097 | 1/AA/2512:2513, 1/AA/2571:2574 | No text annotation Not in a motif group | homologous IL_5J7L_341 IL_71530.2 | |
IL_4V9P_098 | 1/AA/2520:2522, 1/AA/2543:2545 | No text annotation Not in a motif group | geometric IL_2ZNI_001 IL_51629.2 | |
IL_4V9P_099 | 1/AA/2522:2523, 1/AA/2540:2543 | Minor groove platform with intercalation Not in a motif group | homologous IL_5J7L_342 IL_95601.3 | |
IL_4V9P_101 | 1/AA/2591:2592, 1/AA/2601:2603 | Single bulged A Not in a motif group | homologous IL_5J7L_344 IL_37497.2 | |
IL_4V9P_102 | 1/AA/2636:2640, 1/AA/2774:2782 | No text annotation Not in a motif group | homologous IL_5J7L_345 IL_04638.1 | |
IL_4V9P_103 | 1/AA/2652:2658, 1/AA/2663:2668 | Sarcin-Ricin target in LSU H95; G-bulge Not in a motif group | homologous IL_5J7L_346 IL_16458.1 | |
IL_4V9P_104 | 1/AA/2680:2684, 1/AA/2725:2727 | C-loop Not in a motif group | homologous IL_5J7L_347 IL_63596.6 | |
IL_4V9P_105 | 1/AA/2687:2691, 1/AA/2718:2722 | No text annotation Not in a motif group | homologous IL_5J7L_348 IL_08296.3 | |
IL_4V9P_106 | 1/AA/2695:2696, 1/AA/2711:2714 | Multiple bulged bases Not in a motif group | homologous IL_5J7L_349 IL_71530.2 | |
IL_4V9P_107 | 1/AA/2737:2742, 1/AA/2762:2767 | UAA/GAN with extra cWW Not in a motif group | homologous IL_5J7L_350 IL_49767.5 | |
IL_4V9P_108 | 1/AA/2795:2796, 1/AA/2799:2801 | Single bulged A Not in a motif group | geometric IL_7RQB_019 IL_37497.2 | |
IL_4V9P_109 | 1/AA/2806:2811, 1/AA/2889:2892 | No text annotation Not in a motif group | homologous IL_5J7L_351 IL_49460.2 | |
IL_4V9P_110 | 1/AA/2838:2839, 1/AA/2878:2880 | Major groove intercalation Not in a motif group | homologous IL_5J7L_352 IL_16396.2 | |
IL_4V9P_111 | 1/AA/2843:2846, 1/AA/2870:2874 | Multiple bulged bases with non-canonical cWW Not in a motif group | homologous IL_5J7L_353 IL_58764.3 | |
IL_4V9P_112 | 1/AA/2847:2852, 1/AA/2865:2869 | No text annotation Not in a motif group | homologous IL_5J7L_354 IL_83162.5 | |
IL_4V9P_113 | 1/AB/17:18, 1/AB/65:67 | Major groove intercalation Not in a motif group | homologous IL_5J7L_355 IL_37497.2 | |
IL_4V9P_114 | 1/AB/23:28, 1/AB/56:60 | No text annotation Not in a motif group | homologous IL_5J7L_356 IL_18472.2 | |
IL_4V9P_115 | 1/AB/30:31, 1/AB/51:54 | No text annotation Not in a motif group | ||
IL_4V9P_116 | 1/AB/34:38, 1/AB/44:48 | Symmetric double minor groove platform Not in a motif group | geometric IL_5J7L_358 IL_58103.6 | |
IL_4V9P_117 | 1/AB/71:79, 1/AB/97:105 | Bacterial 5S Loop E Not in a motif group | homologous IL_5J7L_359 IL_56455.3 | |
IL_4V9P_118 | 1/BA/30:32, 1/BA/552:553 | Single bulged G Not in a motif group | homologous IL_5J7L_001 IL_00225.2 | |
IL_4V9P_119 | 1/BA/44:45, 1/BA/396:398 | Single bulged A Not in a motif group | homologous IL_5J7L_002 IL_37497.2 | |
IL_4V9P_120 | 1/BA/47:52, 1/BA/359:361 | No text annotation Not in a motif group | homologous IL_5J7L_003 IL_11178.1 | |
IL_4V9P_121 | 1/BA/54:56, 1/BA/356:357 | Minor groove platform Not in a motif group | homologous IL_4LFB_004 IL_93353.1 | |
IL_4V9P_122 | 1/BA/63:66, 1/BA/103:104 | Multiple bulged bases Not in a motif group | homologous IL_5J7L_005 IL_76389.1 | |
IL_4V9P_123 | 1/BA/67:69, 1/BA/99:102 | Minor groove platform with extra cWW Not in a motif group | geometric IL_5J7L_006 IL_65006.1 | |
IL_4V9P_125 | 1/BA/75:76, 1/BA/93:95 | Major groove intercalation Not in a motif group | geometric IL_5J7L_352 IL_16396.2 | |
IL_4V9P_126 | 1/BA/128:131, 1/BA/231:233 | Isolated non-canonical cWW with bulges Not in a motif group | homologous IL_5J7L_009 IL_82068.2 | |
IL_4V9P_127 | 1/BA/132:136, 1/BA/227:230 | Minor groove platform related Not in a motif group | homologous IL_5J7L_010 IL_58764.3 | |
IL_4V9P_128 | 1/BA/144:146, 1/BA/176:178 | Isolated cWH basepair Not in a motif group | homologous IL_5J7L_011 IL_51629.2 | |
IL_4V9P_129 | 1/BA/147:153, 1/BA/168:175 | tWH-tWH-tHW-tHW Not in a motif group | homologous IL_5J7L_012 IL_80604.2 | |
IL_4V9P_130 | 1/BA/200:202, 1/BA/215:217 | No text annotation Not in a motif group | geometric IL_1Z7F_002 IL_95997.1 | |
IL_4V9P_132 | 1/BA/242:247, 1/BA/277:284 | Kink-turn with non-sequential stacking Not in a motif group | homologous IL_5J7L_014 IL_45067.2 | |
IL_4V9P_133 | 1/BA/249:252, 1/BA/274:275 | No text annotation Not in a motif group | homologous IL_5J7L_015 IL_48100.2 | |
IL_4V9P_134 | 1/BA/292:293, 1/BA/304:308 | C-loop Not in a motif group | homologous IL_6CZR_125 IL_37712.2 | |
IL_4V9P_135 | 1/BA/367:369, 1/BA/392:393 | Single bulged U Not in a motif group | homologous IL_5J7L_017 IL_83039.13 | |
IL_4V9P_136 | 1/BA/371:375, 1/BA/389:390 | C-loop Not in a motif group | homologous IL_5J7L_018 IL_75255.1 | |
IL_4V9P_137 | 1/BA/375:376, 1/BA/387:389 | Single bulged G Not in a motif group | geometric IL_5J7L_019 IL_00225.2 | |
IL_4V9P_138 | 1/BA/409:416, 1/BA/427:433 | No text annotation Not in a motif group | homologous IL_4LFB_017 IL_28026.1 | |
IL_4V9P_140 | 1/BA/446:450, 1/BA/483:488 | tSH-tHW-tWW Not in a motif group | geometric IL_5J7L_022 IL_88269.3 | |
IL_4V9P_141 | 1/BA/450:454, 1/BA/479:483 | No text annotation Not in a motif group | ||
IL_4V9P_142 | 1/BA/454:455, 1/BA/477:479 | No text annotation Not in a motif group | ||
IL_4V9P_143 | 1/BA/459:462, 1/BA/470:473 | No text annotation Not in a motif group | ||
IL_4V9P_144 | 1/BA/504:511, 1/BA/540:541 | SSU/LSU pseudoknot Not in a motif group | homologous IL_5J7L_024 IL_15861.7 | |
IL_4V9P_145 | 1/BA/515:521, 1/BA/528:536 | No text annotation Not in a motif group | geometric IL_4V88_415 IL_55871.1 | |
IL_4V9P_146 | 1/BA/569:575, 1/BA/880:881 | No text annotation Not in a motif group | homologous IL_4LFB_022 IL_69996.1 | |
IL_4V9P_147 | 1/BA/580:584, 1/BA/757:761 | tSH-tHW-tHS Not in a motif group | homologous IL_5J7L_027 IL_17136.1 | |
IL_4V9P_148 | 1/BA/594:596, 1/BA/644:645 | Major groove platform Not in a motif group | homologous IL_5J7L_028 IL_27635.1 | |
IL_4V9P_149 | 1/BA/597:598, 1/BA/640:643 | Major groove minor groove platform; mini C-loop Not in a motif group | homologous IL_5J7L_029 IL_09061.6 | |
IL_4V9P_150 | 1/BA/605:612, 1/BA/628:633 | No text annotation Not in a motif group | homologous IL_5J7L_030 IL_78349.1 | |
IL_4V9P_151 | 1/BA/654:655, 1/BA/751:754 | Major groove platform; stack outside cWW Not in a motif group | homologous IL_4LFB_027 IL_50694.2 | |
IL_4V9P_152 | 1/BA/658:659, 1/BA/746:748 | Single stack bend Not in a motif group | homologous IL_5J7L_032 IL_76488.2 | |
IL_4V9P_153 | 1/BA/662:666, 1/BA/740:743 | Tandem non-canonical cWW pairs Not in a motif group | homologous IL_5J7L_033 IL_71110.1 | |
IL_4V9P_154 | 1/BA/680:684, 1/BA/706:710 | No text annotation Not in a motif group | ||
IL_4V9P_155 | 1/BA/684:688, 1/BA/699:706 | Kink-turn Not in a motif group | geometric IL_7A0S_004 IL_45067.2 | |
IL_4V9P_156 | 1/BA/774:778, 1/BA/804:805 | Left turn Not in a motif group | homologous IL_5J7L_036 IL_29346.1 | |
IL_4V9P_157 | 1/BA/778:783, 1/BA/799:804 | No text annotation Not in a motif group | ||
IL_4V9P_158 | 1/BA/887:894, 1/BA/905:910 | 8x6 Sarcin-Ricin with inserted Y; G-bulge Not in a motif group | homologous IL_5J7L_038 IL_24606.2 | |
IL_4V9P_159 | 1/BA/922:923, 1/BA/1393:1395 | Single bulged A Not in a motif group | homologous IL_4LFB_035 IL_37497.2 | |
IL_4V9P_160 | 1/BA/925:927, 1/BA/1390:1391 | Single bulged G Not in a motif group | homologous IL_4LFB_036 IL_00225.2 | |
IL_4V9P_161 | 1/BA/933:935, 1/BA/1380:1384 | Minor groove platform Not in a motif group | homologous IL_5J7L_041 IL_47078.1 | |
IL_4V9P_162 | 1/BA/953:954, 1/BA/1226:1228 | Minor groove platform Not in a motif group | homologous IL_5J7L_042 IL_42622.2 | |
IL_4V9P_163 | 1/BA/993:997, 1/BA/1044:1045 | Minor groove platform Not in a motif group | homologous IL_5J7L_043 IL_47078.1 | |
IL_4V9P_164 | 1/BA/998:999, 1/BA/1041:1043 | Single stack bend Not in a motif group | homologous IL_5J7L_044 IL_76488.2 | |
IL_4V9P_165 | 1/BA/1003:1006, 1/BA/1023:1037 | No text annotation Not in a motif group | ||
IL_4V9P_166 | 1/BA/1048:1050, 1/BA/1208:1209 | Single bulged U Not in a motif group | homologous IL_5J7L_046 IL_83039.13 | |
IL_4V9P_167 | 1/BA/1052:1056, 1/BA/1204:1206 | Isolated cWS basepair Not in a motif group | homologous IL_4LFB_044 IL_76319.2 | |
IL_4V9P_168 | 1/BA/1057:1058, 1/BA/1199:1203 | Minor groove platform Not in a motif group | homologous IL_5J7L_048 IL_93353.1 | |
IL_4V9P_169 | 1/BA/1060:1061, 1/BA/1195:1197 | Single bulged A Not in a motif group | homologous IL_5J7L_049 IL_37497.2 | |
IL_4V9P_170 | 1/BA/1061:1063, 1/BA/1193:1195 | No text annotation Not in a motif group | geometric IL_5J7L_050 IL_95997.1 | |
IL_4V9P_171 | 1/BA/1122:1128, 1/BA/1144:1151 | No text annotation Not in a motif group | ||
IL_4V9P_172 | 1/BA/1129:1133, 1/BA/1141:1143 | No text annotation Not in a motif group | ||
IL_4V9P_173 | 1/BA/1158:1161, 1/BA/1175:1181 | No text annotation Not in a motif group | homologous IL_4LFB_050 IL_42032.1 | |
IL_4V9P_174 | 1/BA/1247:1253, 1/BA/1284:1290 | No text annotation Not in a motif group | homologous IL_5J7L_054 IL_09129.1 | |
IL_4V9P_175 | 1/BA/1255:1258, 1/BA/1277:1282 | No text annotation Not in a motif group | homologous IL_5J7L_055 IL_75461.4 | |
IL_4V9P_176 | 1/BA/1259:1263, 1/BA/1272:1276 | Triple sheared Not in a motif group | homologous IL_5J7L_056 IL_56467.8 | |
IL_4V9P_177 | 1/BA/1303:1308, 1/BA/1329:1334 | No text annotation Not in a motif group | homologous IL_5J7L_057 IL_19954.2 | |
IL_4V9P_178 | 1/BA/1399:1401, 1/BA/1501:1504 | No text annotation Not in a motif group | homologous IL_5J7L_058 IL_36143.3 | |
IL_4V9P_179 | 1/BA/1401:1404, 1/BA/1497:1501 | No text annotation Not in a motif group | geometric IL_4V88_464 IL_99670.1 | |
IL_4V9P_180 | 1/BA/1405:1407, 1/BA/1494:1496 | No text annotation Not in a motif group | geometric IL_4V88_465 IL_95997.1 | |
IL_4V9P_181 | 1/BA/1407:1409, 1/BA/1491:1494 | Decoding loop related Not in a motif group | geometric IL_3C3Z_002 IL_64417.1 | |
IL_4V9P_182 | 1/BA/1412:1414, 1/BA/1486:1488 | No text annotation Not in a motif group | homologous IL_5J7L_061 IL_95997.1 | |
IL_4V9P_183 | 1/BA/1416:1419, 1/BA/1481:1484 | Double sheared Not in a motif group | homologous IL_5J7L_062 IL_09705.9 | |
IL_4V9P_184 | 1/BA/1430:1435, 1/BA/1466:1470 | Triple sheared related Not in a motif group | homologous IL_5J7L_063 IL_64879.2 | |
IL_4V9P_185 | 1/BA/1440:1442, 1/BA/1460:1461 | Minor groove platform Not in a motif group | homologous IL_5J7L_064 IL_42622.2 | |
IL_4V9P_187 | 1/CA/24:30, 1/CA/510:516 | Triple sheared with non-canonical cWW Not in a motif group | homologous IL_5J7L_245 IL_66414.6 | |
IL_4V9P_188 | 1/CA/36:37, 1/CA/442:444 | Single bulged A Not in a motif group | homologous IL_5J7L_246 IL_37497.2 | |
IL_4V9P_189 | 1/CA/43:44, 1/CA/434:436 | Minor groove platform Not in a motif group | homologous IL_5J7L_247 IL_42622.2 | |
IL_4V9P_190 | 1/CA/81:85, 1/CA/97:105 | No text annotation Not in a motif group | homologous IL_5J7L_248 IL_93699.1 | |
IL_4V9P_191 | 1/CA/183:184, 1/CA/212:214 | Single stack bend Not in a motif group | homologous IL_5J7L_249 IL_76488.2 | |
IL_4V9P_192 | 1/CA/188:194, 1/CA/201:208 | 8x7 Sarcin-Ricin; G-bulge Not in a motif group | geometric IL_5J7L_250 IL_04346.7 | |
IL_4V9P_193 | 1/CA/239:245, 1/CA/253:258 | 7x6 Sarcin-Ricin; G-bulge Not in a motif group | homologous IL_5J7L_251 IL_76042.2 | |
IL_4V9P_194 | 1/CA/269:271, 1/CA/366:370 | No text annotation Not in a motif group | homologous IL_5J7L_252 IL_47972.1 | |
IL_4V9P_195 | 1/CA/274:281, 1/CA/359:363 | No text annotation Not in a motif group | homologous IL_5J7L_253 IL_77870.1 | |
IL_4V9P_196 | 1/CA/293:295, 1/CA/343:347 | No text annotation Not in a motif group | homologous IL_5J7L_254 IL_69440.1 | |
IL_4V9P_197 | 1/CA/481:484, 1/CA/496:509 | No text annotation Not in a motif group | homologous IL_5J7L_255 IL_60992.6 | |
IL_4V9P_198 | 1/CA/536:539, 1/CA/554:557 | Double sheared Not in a motif group | homologous IL_5J7L_256 IL_09705.9 | |
IL_4V9P_200 | 1/CA/564:566, 1/CA/575:577 | No text annotation Not in a motif group | homologous IL_5J7L_257 IL_95997.1 | |
IL_4V9P_201 | 1/CA/606:610, 1/CA/618:622 | AAA cross-strand stack Not in a motif group | homologous IL_5J7L_258 IL_17136.1 | |
IL_4V9P_202 | 1/CA/672:674, 1/CA/806:808 | No text annotation Not in a motif group | homologous IL_7RQB_017 IL_95997.1 | |
IL_4V9P_203 | 1/CA/674:678, 1/CA/799:806 | tHW-tHW cross-strand stack Not in a motif group | geometric IL_5J7L_260 IL_17470.6 | |
IL_4V9P_204 | 1/CA/697:698, 1/CA/763:765 | Single bulged A Not in a motif group | homologous IL_5J7L_261 IL_37497.2 | |
IL_4V9P_205 | 1/CA/702:703, 1/CA/728:730 | Single bulged G Not in a motif group | geometric IL_5J7L_262 IL_00225.2 | |
IL_4V9P_206 | 1/CA/703:707, 1/CA/724:728 | Triple sheared Not in a motif group | homologous IL_5J7L_263 IL_56467.8 | |
IL_4V9P_207 | 1/CA/738:740, 1/CA/757:758 | Major groove platform Not in a motif group | homologous IL_5J7L_264 IL_27635.1 | |
IL_4V9P_208 | 1/CA/775:777, 1/CA/787:791 | Multiple bulged bases Not in a motif group | homologous IL_5J7L_265 IL_90991.6 | |
IL_4V9P_209 | 1/CA/844:847, 1/CA/933:934 | Other IL Not in a motif group | homologous IL_5J7L_267 IL_92001.1 | |
IL_4V9P_210 | 1/CA/847:848, 1/CA/930:933 | Stack outside cWW Not in a motif group | geometric IL_5J7L_268 IL_37629.1 | |
IL_4V9P_211 | 1/CA/850:851, 1/CA/926:928 | Single stack bend Not in a motif group | homologous IL_5J7L_269 IL_76488.2 | |
IL_4V9P_212 | 1/CA/856:862, 1/CA/915:921 | 7x7 Sarcin-Ricin with intercalated A; G-bulge Not in a motif group | geometric IL_5J7L_270 IL_93830.3 | |
IL_4V9P_213 | 1/CA/862:863, 1/CA/913:915 | Single bulged G Not in a motif group | homologous IL_5J7L_271 IL_00225.2 | |
IL_4V9P_214 | 1/CA/864:868, 1/CA/909:912 | C-loop Not in a motif group | homologous IL_5J7L_272 IL_63596.6 | |
IL_4V9P_215 | 1/CA/870:872, 1/CA/905:907 | No text annotation Not in a motif group | homologous IL_5J7L_273 IL_95997.1 | |
IL_4V9P_216 | 1/CA/875:879, 1/CA/898:902 | Triple sheared Not in a motif group | homologous IL_5J7L_274 IL_56467.8 | |
IL_4V9P_217 | 1/CA/880:882, 1/CA/894:897 | No text annotation Not in a motif group | ||
IL_4V9P_218 | 1/CA/994:996, 1/CA/1159:1160 | Single bulged C Not in a motif group | homologous IL_5J7L_276 IL_61258.12 | |
IL_4V9P_219 | 1/CA/998:1002, 1/CA/1153:1157 | UAA/GAN Not in a motif group | homologous IL_7RQB_036 IL_89002.2 | |
IL_4V9P_220 | 1/CA/1004:1011, 1/CA/1150:1151 | SSU/LSU pseudoknot Not in a motif group | homologous IL_5J7L_278 IL_15861.7 | |
IL_4V9P_221 | 1/CA/1011:1013, 1/CA/1149:1150 | Single bulged U Not in a motif group | geometric IL_5J7L_279 IL_83039.13 | |
IL_4V9P_222 | 1/CA/1018:1024, 1/CA/1140:1144 | No text annotation Not in a motif group | homologous IL_4WF9_039 IL_57188.3 | |
IL_4V9P_223 | 1/CA/1024:1030, 1/CA/1124:1140 | No text annotation Not in a motif group | geometric IL_5J7L_281 IL_50715.1 | |
IL_4V9P_224 | 1/CA/1031:1034, 1/CA/1121:1123 | Isolated non-canonical cWW with bulges Not in a motif group | homologous IL_7RQB_041 IL_82068.2 | |
IL_4V9P_225 | 1/CA/1038:1041, 1/CA/1114:1117 | Tandem non-canonical cWW pairs Not in a motif group | homologous IL_5J7L_283 IL_30621.2 | |
IL_4V9P_226 | 1/CA/1043:1051, 1/CA/1108:1112 | Kink-turn Not in a motif group | homologous IL_5J7L_284 IL_90538.4 | |
IL_4V9P_227 | 1/CA/1059:1062, 1/CA/1076:1079 | No text annotation Not in a motif group | homologous IL_5J7L_285 IL_23544.2 | |
IL_4V9P_228 | 1/CA/1087:1090, 1/CA/1101:1102 | No text annotation Not in a motif group | homologous IL_6PRV_002 NA | |
IL_4V9P_229 | 1/CA/1196:1198, 1/CA/1247:1250 | Isolated cWS basepair Not in a motif group | homologous IL_5J7L_286 IL_52767.2 | |
IL_4V9P_230 | 1/CA/1202:1206, 1/CA/1240:1243 | No text annotation Not in a motif group | homologous IL_5J7L_287 IL_91920.1 | |
IL_4V9P_231 | 1/CA/1208:1215, 1/CA/1234:1238 | Kink-turn Not in a motif group | homologous IL_5J7L_288 IL_70923.2 | |
IL_4V9P_232 | 1/CA/1262:1269, 1/CA/2011:2017 | 8x7 Sarcin-Ricin; G-bulge Not in a motif group | homologous IL_5J7L_289 IL_04346.7 | |
IL_4V9P_233 | 1/CA/1310:1313, 1/CA/1603:1604 | Major groove platform; stack outside cWW Not in a motif group | homologous IL_7RQB_050 IL_50694.2 | |
IL_4V9P_234 | 1/CA/1319:1323, 1/CA/1331:1333 | C-loop Not in a motif group | homologous IL_5J7L_291 IL_63596.6 | |
IL_4V9P_235 | 1/CA/1351:1355, 1/CA/1376:1380 | UAA/GAN Not in a motif group | homologous IL_5J7L_292 IL_89002.2 | |
IL_4V9P_236 | 1/CA/1357:1361, 1/CA/1370:1374 | tSH-tHW-tHS Not in a motif group | homologous IL_5J7L_293 IL_17136.1 | |
IL_4V9P_237 | 1/CA/1415:1416, 1/CA/1582:1587 | No text annotation Not in a motif group | homologous IL_5J7L_294 IL_90348.1 | |
IL_4V9P_238 | 1/CA/1417:1421, 1/CA/1577:1581 | UAA/GAN Not in a motif group | homologous IL_5J7L_295 IL_89002.2 | |
IL_4V9P_239 | 1/CA/1432:1435, 1/CA/1557:1561 | Tandem non-canonical cWW pairs Not in a motif group | homologous IL_5J7L_296 IL_55178.1 | |
IL_4V9P_240 | 1/CA/1437:1440, 1/CA/1551:1555 | tSH-tHW Not in a motif group | homologous IL_5J7L_297 IL_04059.1 | |
IL_4V9P_241 | 1/CA/1450:1451, 1/CA/1459:1461 | Single bulged U Not in a motif group | homologous IL_5J7L_298 IL_83039.13 | |
IL_4V9P_242 | 1/CA/1468:1471, 1/CA/1520:1524 | No text annotation Not in a motif group | homologous IL_5J7L_299 IL_68574.2 | |
IL_4V9P_243 | 1/CA/1474:1479, 1/CA/1512:1517 | No text annotation Not in a motif group | ||
IL_4V9P_244 | 1/CA/1481:1482, 1/CA/1507:1510 | No text annotation Not in a motif group | homologous IL_5J7L_301 IL_67474.4 | |
IL_4V9P_245 | 1/CA/1482:1484, 1/CA/1505:1507 | No text annotation Not in a motif group | geometric IL_6OL3_002 IL_95997.1 | |
IL_4V9P_246 | 1/CA/1489:1491, 1/CA/1499:1500 | Single bulged A Not in a motif group | homologous IL_5J7L_302 IL_37497.2 | |
IL_4V9P_247 | 1/CA/1526:1529, 1/CA/1542:1546 | UAA/GAN variation Not in a motif group | homologous IL_5J7L_303 IL_07235.1 | |
IL_4V9P_248 | 1/CA/1651:1656, 1/CA/2004:2006 | No text annotation Not in a motif group | homologous IL_5J7L_304 IL_12566.2 | |
IL_4V9P_249 | 1/CA/1663:1665, 1/CA/1995:1997 | Isolated tWW turn Not in a motif group | homologous IL_5J7L_305 IL_54997.7 | |
IL_4V9P_250 | 1/CA/1666:1669, 1/CA/1993:1994 | Major groove platform; stack outside cWW Not in a motif group | geometric IL_7RQB_066 IL_50694.2 | |
IL_4V9P_251 | 1/CA/1669:1674, 1/CA/1990:1993 | Intercalated tWH Not in a motif group | homologous IL_5J7L_307 IL_82842.2 | |
IL_4V9P_252 | 1/CA/1686:1691, 1/CA/1696:1702 | tSH-tSH-tHH-tHS Not in a motif group | geometric IL_5J7L_308 IL_65969.2 | |
IL_4V9P_253 | 1/CA/1712:1718, 1/CA/1742:1746 | 6x5 Sarcin-Ricin; G-bulge Not in a motif group | homologous IL_5J7L_309 IL_88269.3 | |
IL_4V9P_254 | 1/CA/1770:1771, 1/CA/1980:1982 | Single bulged A Not in a motif group | homologous IL_5J7L_312 IL_37497.2 | |
IL_4V9P_255 | 1/CA/1798:1804, 1/CA/1813:1821 | Kink-turn related Not in a motif group | homologous IL_5J7L_313 IL_17069.3 | |
IL_4V9P_256 | 1/CA/1837:1840, 1/CA/1902:1903 | Major groove outside cWW, minor groove, intercalation pocket Not in a motif group | homologous IL_5J7L_314 IL_88739.1 | |
IL_4V9P_257 | 1/CA/1841:1842, 1/CA/1898:1901 | Major groove outside cWW, minor groove, intercalation pocket Not in a motif group | homologous IL_5J7L_315 IL_16396.2 | |
IL_4V9P_258 | 1/CA/1846:1849, 1/CA/1893:1894 | Minor groove platform Not in a motif group | homologous IL_7RQB_073 IL_88739.1 | |
IL_4V9P_259 | 1/CA/1864:1867, 1/CA/1874:1878 | UAA/GAN Not in a motif group | homologous IL_4WF9_075 IL_77691.1 | |
IL_4V9P_260 | 1/CA/1933:1934, 1/CA/1964:1967 | Multiple bulged bases Not in a motif group | homologous IL_7RQB_076 IL_59677.2 | |
IL_4V9P_261 | 1/CA/1934:1945, 1/CA/1961:1964 | No text annotation Not in a motif group | geometric IL_4V9F_071 IL_81589.2 | |
IL_4V9P_262 | 1/CA/2050:2052, 1/CA/2617:2618 | Major groove platform Not in a motif group | homologous IL_5J7L_320 IL_27635.1 | |
IL_4V9P_263 | 1/CA/2054:2056, 1/CA/2612:2615 | No text annotation Not in a motif group | homologous IL_5J7L_321 IL_54678.5 | |
IL_4V9P_264 | 1/CA/2067:2069, 1/CA/2442:2443 | Single bulged U Not in a motif group | homologous IL_7A0S_075 IL_83039.13 | |
IL_4V9P_265 | 1/CA/2070:2071, 1/CA/2438:2441 | Minor groove platform Not in a motif group | homologous IL_4WF9_081 IL_42622.2 | |
IL_4V9P_266 | 1/CA/2081:2083, 1/CA/2236:2239 | Isolated tHS basepair with bulges Not in a motif group | homologous IL_5J7L_325 IL_38958.7 | |
IL_4V9P_267 | 1/CA/2085:2087, 1/CA/2232:2234 | No text annotation Not in a motif group | homologous IL_5J7L_326 IL_95997.1 | |
IL_4V9P_268 | 1/CA/2100:2103, 1/CA/2186:2189 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_402D_001 IL_30621.2 | |
IL_4V9P_269 | 1/CA/2202:2204, 1/CA/2220:2221 | Single bulged U Not in a motif group | homologous IL_5J7L_331 IL_83039.13 | |
IL_4V9P_270 | 1/CA/2350:2353, 1/CA/2364:2367 | Double sheared Not in a motif group | homologous IL_5J7L_333 IL_09705.9 | |
IL_4V9P_271 | 1/CA/2401:2403, 1/CA/2414:2415 | No text annotation Not in a motif group | ||
IL_4V9P_272 | 1/CA/2453:2454, 1/CA/2498:2500 | Single stack bend Not in a motif group | geometric IL_4WF9_089 IL_76488.2 | |
IL_4V9P_273 | 1/CA/2454:2455, 1/CA/2496:2498 | Major groove platform Not in a motif group | homologous IL_7RQB_092 IL_27635.1 | |
IL_4V9P_274 | 1/CA/2457:2459, 1/CA/2493:2494 | Major groove platform Not in a motif group | geometric IL_7A0S_085 IL_27635.1 | |
IL_4V9P_275 | 1/CA/2459:2461, 1/CA/2489:2493 | Major groove minor groove platform with extra cWW Not in a motif group | homologous IL_5J7L_337 IL_92788.2 | |
IL_4V9P_276 | 1/CA/2466:2470, 1/CA/2480:2484 | Triple sheared Not in a motif group | homologous IL_5J7L_338 IL_56467.8 | |
IL_4V9P_277 | 1/CA/2507:2508, 1/CA/2580:2582 | Major groove platform Not in a motif group | homologous IL_7RQB_096 IL_76223.2 | |
IL_4V9P_278 | 1/CA/2510:2512, 1/CA/2574:2578 | Isolated non-canonical cWW with bulges Not in a motif group | homologous IL_5J7L_340 IL_90933.2 | |
IL_4V9P_279 | 1/CA/2512:2513, 1/CA/2571:2574 | No text annotation Not in a motif group | geometric IL_5J7L_341 IL_71530.2 | |
IL_4V9P_280 | 1/CA/2522:2523, 1/CA/2540:2543 | Minor groove platform with intercalation Not in a motif group | homologous IL_5J7L_342 IL_95601.3 | |
IL_4V9P_282 | 1/CA/2591:2592, 1/CA/2601:2603 | Single bulged A Not in a motif group | homologous IL_5J7L_344 IL_37497.2 | |
IL_4V9P_283 | 1/CA/2636:2640, 1/CA/2774:2782 | No text annotation Not in a motif group | homologous IL_5J7L_345 IL_04638.1 | |
IL_4V9P_284 | 1/CA/2652:2658, 1/CA/2663:2668 | Sarcin-Ricin target in LSU H95; G-bulge Not in a motif group | geometric IL_7RQB_103 IL_16458.1 | |
IL_4V9P_285 | 1/CA/2680:2684, 1/CA/2725:2727 | C-loop Not in a motif group | homologous IL_5J7L_347 IL_63596.6 | |
IL_4V9P_286 | 1/CA/2687:2691, 1/CA/2718:2722 | No text annotation Not in a motif group | homologous IL_5J7L_348 IL_08296.3 | |
IL_4V9P_287 | 1/CA/2695:2696, 1/CA/2711:2714 | Multiple bulged bases Not in a motif group | homologous IL_5J7L_349 IL_71530.2 | |
IL_4V9P_288 | 1/CA/2737:2742, 1/CA/2762:2767 | UAA/GAN with extra cWW Not in a motif group | homologous IL_5J7L_350 IL_49767.5 | |
IL_4V9P_289 | 1/CA/2795:2796, 1/CA/2799:2801 | Single bulged A Not in a motif group | geometric IL_4WF9_022 IL_37497.2 | |
IL_4V9P_290 | 1/CA/2806:2811, 1/CA/2889:2892 | No text annotation Not in a motif group | homologous IL_5J7L_351 IL_49460.2 | |
IL_4V9P_291 | 1/CA/2838:2839, 1/CA/2878:2880 | Major groove intercalation Not in a motif group | homologous IL_5J7L_352 IL_16396.2 | |
IL_4V9P_292 | 1/CA/2843:2846, 1/CA/2870:2874 | Multiple bulged bases with non-canonical cWW Not in a motif group | homologous IL_5J7L_353 IL_58764.3 | |
IL_4V9P_293 | 1/CA/2847:2852, 1/CA/2865:2869 | No text annotation Not in a motif group | homologous IL_5J7L_354 IL_83162.5 | |
IL_4V9P_294 | 1/CB/17:18, 1/CB/65:67 | Major groove intercalation Not in a motif group | homologous IL_5J7L_355 IL_37497.2 | |
IL_4V9P_295 | 1/CB/23:28, 1/CB/56:60 | No text annotation Not in a motif group | homologous IL_5J7L_356 IL_18472.2 | |
IL_4V9P_296 | 1/CB/30:31, 1/CB/51:54 | Major groove minor groove platform; mini C-loop Not in a motif group | homologous IL_4V9F_103 IL_09061.6 | |
IL_4V9P_297 | 1/CB/34:38, 1/CB/44:48 | Symmetric double minor groove platform Not in a motif group | geometric IL_5J7L_358 IL_58103.6 | |
IL_4V9P_298 | 1/CB/71:79, 1/CB/97:105 | Bacterial 5S Loop E Not in a motif group | homologous IL_5J7L_359 IL_56455.3 | |
IL_4V9P_299 | 1/DA/30:32, 1/DA/552:553 | Single bulged G Not in a motif group | homologous IL_5J7L_001 IL_00225.2 | |
IL_4V9P_300 | 1/DA/44:45, 1/DA/396:398 | Single bulged A Not in a motif group | homologous IL_5J7L_002 IL_37497.2 | |
IL_4V9P_301 | 1/DA/47:52, 1/DA/359:361 | No text annotation Not in a motif group | homologous IL_5J7L_003 IL_11178.1 | |
IL_4V9P_302 | 1/DA/54:56, 1/DA/356:357 | Minor groove platform Not in a motif group | homologous IL_4LFB_004 IL_93353.1 | |
IL_4V9P_303 | 1/DA/63:66, 1/DA/103:104 | Multiple bulged bases Not in a motif group | homologous IL_5J7L_005 IL_76389.1 | |
IL_4V9P_304 | 1/DA/67:69, 1/DA/99:102 | Minor groove platform with extra cWW Not in a motif group | geometric IL_5J7L_006 IL_65006.1 | |
IL_4V9P_305 | 1/DA/69:73, 1/DA/97:99 | No text annotation Not in a motif group | ||
IL_4V9P_306 | 1/DA/75:76, 1/DA/93:95 | Single bulged G Not in a motif group | geometric IL_7A0S_099 IL_00225.2 | |
IL_4V9P_307 | 1/DA/128:131, 1/DA/231:233 | Isolated non-canonical cWW with bulges Not in a motif group | homologous IL_5J7L_009 IL_82068.2 | |
IL_4V9P_308 | 1/DA/132:136, 1/DA/227:230 | Minor groove platform related Not in a motif group | homologous IL_5J7L_010 IL_58764.3 | |
IL_4V9P_309 | 1/DA/144:146, 1/DA/176:178 | Isolated cWH basepair Not in a motif group | homologous IL_5J7L_011 IL_51629.2 | |
IL_4V9P_310 | 1/DA/147:153, 1/DA/168:175 | tWH-tWH-tHW-tHW Not in a motif group | homologous IL_5J7L_012 IL_80604.2 | |
IL_4V9P_311 | 1/DA/203:206, 1/DA/213:214 | Minor groove platform Not in a motif group | geometric IL_3RW6_003 IL_93353.1 | |
IL_4V9P_312 | 1/DA/242:247, 1/DA/277:284 | Kink-turn with non-sequential stacking Not in a motif group | homologous IL_5J7L_014 IL_45067.2 | |
IL_4V9P_313 | 1/DA/249:252, 1/DA/274:275 | No text annotation Not in a motif group | homologous IL_5J7L_015 IL_48100.2 | |
IL_4V9P_314 | 1/DA/292:293, 1/DA/304:308 | C-loop Not in a motif group | homologous IL_6CZR_125 IL_37712.2 | |
IL_4V9P_315 | 1/DA/367:369, 1/DA/392:393 | Single bulged U Not in a motif group | homologous IL_4LFB_014 IL_83039.13 | |
IL_4V9P_316 | 1/DA/371:375, 1/DA/389:390 | C-loop Not in a motif group | homologous IL_5J7L_018 IL_75255.1 | |
IL_4V9P_317 | 1/DA/375:376, 1/DA/387:389 | Single bulged G Not in a motif group | geometric IL_5J7L_019 IL_00225.2 | |
IL_4V9P_318 | 1/DA/409:416, 1/DA/427:433 | No text annotation Not in a motif group | homologous IL_4LFB_017 IL_28026.1 | |
IL_4V9P_319 | 1/DA/440:442, 1/DA/492:497 | No text annotation Not in a motif group | homologous IL_5J7L_021 IL_22248.1 | |
IL_4V9P_320 | 1/DA/456:458, 1/DA/474:476 | No text annotation Not in a motif group | geometric IL_4KR9_001 IL_51629.2 | |
IL_4V9P_321 | 1/DA/504:511, 1/DA/540:541 | SSU/LSU pseudoknot Not in a motif group | homologous IL_5J7L_024 IL_15861.7 | |
IL_4V9P_322 | 1/DA/515:521, 1/DA/528:536 | No text annotation Not in a motif group | geometric IL_4V88_415 IL_55871.1 | |
IL_4V9P_323 | 1/DA/569:575, 1/DA/880:881 | No text annotation Not in a motif group | homologous IL_4LFB_022 IL_69996.1 | |
IL_4V9P_324 | 1/DA/580:584, 1/DA/757:761 | tSH-tHW-tHS Not in a motif group | homologous IL_5J7L_027 IL_17136.1 | |
IL_4V9P_325 | 1/DA/594:596, 1/DA/644:645 | Major groove platform Not in a motif group | homologous IL_5J7L_028 IL_27635.1 | |
IL_4V9P_326 | 1/DA/597:598, 1/DA/640:643 | Major groove minor groove platform; mini C-loop Not in a motif group | homologous IL_5J7L_029 IL_09061.6 | |
IL_4V9P_327 | 1/DA/605:612, 1/DA/628:633 | No text annotation Not in a motif group | homologous IL_5J7L_030 IL_78349.1 | |
IL_4V9P_328 | 1/DA/654:655, 1/DA/751:754 | Major groove platform; stack outside cWW Not in a motif group | homologous IL_4LFB_027 IL_50694.2 | |
IL_4V9P_329 | 1/DA/658:659, 1/DA/746:748 | Single stack bend Not in a motif group | homologous IL_5J7L_032 IL_76488.2 | |
IL_4V9P_330 | 1/DA/662:666, 1/DA/740:743 | Tandem non-canonical cWW pairs Not in a motif group | homologous IL_5J7L_033 IL_71110.1 | |
IL_4V9P_331 | 1/DA/673:678, 1/DA/712:717 | No text annotation Not in a motif group | homologous IL_4LFB_030 IL_04668.1 | |
IL_4V9P_332 | 1/DA/684:688, 1/DA/699:706 | Kink-turn Not in a motif group | homologous IL_5J7L_035 IL_45067.2 | |
IL_4V9P_333 | 1/DA/774:778, 1/DA/804:805 | Left turn Not in a motif group | homologous IL_5J7L_036 IL_29346.1 | |
IL_4V9P_334 | 1/DA/779:783, 1/DA/799:803 | tSH-tHW-tHS Not in a motif group | homologous IL_5J7L_037 IL_17136.1 | |
IL_4V9P_335 | 1/DA/835:837, 1/DA/849:851 | Isolated cWH basepair Not in a motif group | geometric IL_4J50_001 IL_51629.2 | |
IL_4V9P_336 | 1/DA/887:894, 1/DA/905:910 | 8x6 Sarcin-Ricin with inserted Y; G-bulge Not in a motif group | homologous IL_5J7L_038 IL_24606.2 | |
IL_4V9P_337 | 1/DA/922:923, 1/DA/1393:1395 | Single bulged A Not in a motif group | homologous IL_5J7L_039 IL_37497.2 | |
IL_4V9P_338 | 1/DA/925:927, 1/DA/1390:1391 | Single bulged G Not in a motif group | homologous IL_5J7L_040 IL_00225.2 | |
IL_4V9P_339 | 1/DA/933:935, 1/DA/1380:1384 | Minor groove platform Not in a motif group | homologous IL_4LFB_037 IL_47078.1 | |
IL_4V9P_340 | 1/DA/953:954, 1/DA/1226:1228 | No text annotation Not in a motif group | homologous IL_6CZR_150 NA | |
IL_4V9P_341 | 1/DA/993:997, 1/DA/1044:1045 | Minor groove platform Not in a motif group | homologous IL_5J7L_043 IL_47078.1 | |
IL_4V9P_342 | 1/DA/998:999, 1/DA/1041:1043 | Single stack bend Not in a motif group | homologous IL_5J7L_044 IL_76488.2 | |
IL_4V9P_343 | 1/DA/1007:1009, 1/DA/1020:1022 | Isolated cWH basepair Not in a motif group | geometric IL_4KQ0_003 IL_51629.2 | |
IL_4V9P_344 | 1/DA/1048:1050, 1/DA/1208:1209 | Single bulged U Not in a motif group | homologous IL_5J7L_046 IL_83039.13 | |
IL_4V9P_345 | 1/DA/1052:1056, 1/DA/1204:1206 | Isolated cWS basepair Not in a motif group | homologous IL_4LFB_044 IL_76319.2 | |
IL_4V9P_346 | 1/DA/1057:1058, 1/DA/1199:1203 | Minor groove platform Not in a motif group | homologous IL_5J7L_048 IL_93353.1 | |
IL_4V9P_347 | 1/DA/1060:1061, 1/DA/1195:1197 | Single bulged A Not in a motif group | homologous IL_5J7L_049 IL_37497.2 | |
IL_4V9P_348 | 1/DA/1061:1063, 1/DA/1193:1195 | No text annotation Not in a motif group | geometric IL_5J7L_050 IL_95997.1 | |
IL_4V9P_349 | 1/DA/1122:1128, 1/DA/1144:1151 | No text annotation Not in a motif group | ||
IL_4V9P_350 | 1/DA/1129:1133, 1/DA/1141:1143 | No text annotation Not in a motif group | ||
IL_4V9P_351 | 1/DA/1158:1161, 1/DA/1175:1181 | No text annotation Not in a motif group | homologous IL_4LFB_050 IL_42032.1 | |
IL_4V9P_352 | 1/DA/1247:1253, 1/DA/1284:1290 | No text annotation Not in a motif group | homologous IL_5J7L_054 IL_09129.1 | |
IL_4V9P_353 | 1/DA/1255:1258, 1/DA/1277:1282 | No text annotation Not in a motif group | homologous IL_5J7L_055 IL_75461.4 | |
IL_4V9P_354 | 1/DA/1259:1263, 1/DA/1272:1276 | Triple sheared Not in a motif group | homologous IL_5J7L_056 IL_56467.8 | |
IL_4V9P_355 | 1/DA/1303:1308, 1/DA/1329:1334 | No text annotation Not in a motif group | homologous IL_5J7L_057 IL_19954.2 | |
IL_4V9P_357 | 1/DA/1399:1401, 1/DA/1501:1504 | No text annotation Not in a motif group | homologous IL_5J7L_058 IL_36143.3 | |
IL_4V9P_358 | 1/DA/1401:1404, 1/DA/1497:1501 | No text annotation Not in a motif group | geometric IL_4V88_464 IL_99670.1 | |
IL_4V9P_359 | 1/DA/1405:1407, 1/DA/1494:1496 | No text annotation Not in a motif group | geometric IL_4V9F_017 IL_95997.1 | |
IL_4V9P_360 | 1/DA/1407:1409, 1/DA/1491:1494 | Decoding loop related Not in a motif group | geometric IL_3C3Z_002 IL_64417.1 | |
IL_4V9P_361 | 1/DA/1412:1414, 1/DA/1486:1488 | No text annotation Not in a motif group | homologous IL_5J7L_061 IL_95997.1 | |
IL_4V9P_362 | 1/DA/1416:1419, 1/DA/1481:1484 | Double sheared Not in a motif group | homologous IL_5J7L_062 IL_09705.9 | |
IL_4V9P_363 | 1/DA/1430:1435, 1/DA/1466:1470 | Triple sheared related Not in a motif group | homologous IL_5J7L_063 IL_64879.2 | |
IL_4V9P_364 | 1/DA/1440:1442, 1/DA/1460:1461 | Minor groove platform Not in a motif group | homologous IL_5J7L_064 IL_42622.2 | |
IL_4V9P_365 | 1/DA/1445:1448, 1/DA/1455:1457 | No text annotation Not in a motif group | homologous IL_5J7L_065 IL_02284.5 | |
IL_4V9P_366 | 1/EA/24:30, 1/EA/510:516 | Triple sheared with non-canonical cWW Not in a motif group | homologous IL_5J7L_245 IL_66414.6 | |
IL_4V9P_367 | 1/EA/36:37, 1/EA/442:444 | Single bulged A Not in a motif group | homologous IL_5J7L_246 IL_37497.2 | |
IL_4V9P_368 | 1/EA/43:44, 1/EA/434:436 | Minor groove platform Not in a motif group | homologous IL_5J7L_247 IL_42622.2 | |
IL_4V9P_369 | 1/EA/81:85, 1/EA/97:105 | No text annotation Not in a motif group | homologous IL_5J7L_248 IL_93699.1 | |
IL_4V9P_370 | 1/EA/183:184, 1/EA/212:214 | Single stack bend Not in a motif group | homologous IL_5J7L_249 IL_76488.2 | |
IL_4V9P_371 | 1/EA/188:194, 1/EA/201:208 | 8x7 Sarcin-Ricin; G-bulge Not in a motif group | homologous IL_5J7L_250 IL_04346.7 | |
IL_4V9P_372 | 1/EA/239:245, 1/EA/253:258 | 7x6 Sarcin-Ricin; G-bulge Not in a motif group | homologous IL_5J7L_251 IL_76042.2 | |
IL_4V9P_373 | 1/EA/269:271, 1/EA/366:370 | No text annotation Not in a motif group | homologous IL_5J7L_252 IL_47972.1 | |
IL_4V9P_374 | 1/EA/274:282, 1/EA/358:363 | No text annotation Not in a motif group | ||
IL_4V9P_375 | 1/EA/293:295, 1/EA/343:347 | No text annotation Not in a motif group | homologous IL_5J7L_254 IL_69440.1 | |
IL_4V9P_376 | 1/EA/481:484, 1/EA/496:509 | No text annotation Not in a motif group | homologous IL_5J7L_255 IL_60992.6 | |
IL_4V9P_377 | 1/EA/536:539, 1/EA/554:557 | Double sheared Not in a motif group | homologous IL_5J7L_256 IL_09705.9 | |
IL_4V9P_379 | 1/EA/564:566, 1/EA/575:577 | No text annotation Not in a motif group | homologous IL_5J7L_257 IL_95997.1 | |
IL_4V9P_380 | 1/EA/606:610, 1/EA/618:622 | AAA cross-strand stack Not in a motif group | homologous IL_5J7L_258 IL_17136.1 | |
IL_4V9P_381 | 1/EA/672:674, 1/EA/806:808 | No text annotation Not in a motif group | geometric IL_7RQB_017 IL_95997.1 | |
IL_4V9P_382 | 1/EA/674:678, 1/EA/799:806 | tHW-tHW cross-strand stack Not in a motif group | homologous IL_5J7L_260 IL_17470.6 | |
IL_4V9P_383 | 1/EA/697:698, 1/EA/763:765 | Single bulged A Not in a motif group | homologous IL_5J7L_261 IL_37497.2 | |
IL_4V9P_384 | 1/EA/702:703, 1/EA/728:730 | Single bulged G Not in a motif group | homologous IL_5J7L_262 IL_00225.2 | |
IL_4V9P_385 | 1/EA/703:707, 1/EA/724:728 | Triple sheared Not in a motif group | geometric IL_5J7L_263 IL_56467.8 | |
IL_4V9P_386 | 1/EA/738:740, 1/EA/757:758 | Major groove platform Not in a motif group | homologous IL_5J7L_264 IL_27635.1 | |
IL_4V9P_387 | 1/EA/775:777, 1/EA/787:791 | Multiple bulged bases Not in a motif group | homologous IL_5J7L_265 IL_90991.6 | |
IL_4V9P_388 | 1/EA/844:847, 1/EA/933:934 | Other IL Not in a motif group | geometric IL_5J7L_267 IL_92001.1 | |
IL_4V9P_389 | 1/EA/847:848, 1/EA/930:933 | Stack outside cWW Not in a motif group | homologous IL_5J7L_268 IL_37629.1 | |
IL_4V9P_390 | 1/EA/850:851, 1/EA/926:928 | Single stack bend Not in a motif group | homologous IL_5J7L_269 IL_76488.2 | |
IL_4V9P_391 | 1/EA/856:862, 1/EA/915:921 | 7x7 Sarcin-Ricin with intercalated A; G-bulge Not in a motif group | geometric IL_5J7L_270 IL_93830.3 | |
IL_4V9P_392 | 1/EA/862:863, 1/EA/913:915 | Single bulged G Not in a motif group | homologous IL_5J7L_271 IL_00225.2 | |
IL_4V9P_393 | 1/EA/864:868, 1/EA/909:912 | C-loop Not in a motif group | homologous IL_5J7L_272 IL_63596.6 | |
IL_4V9P_394 | 1/EA/870:872, 1/EA/905:907 | No text annotation Not in a motif group | homologous IL_5J7L_273 IL_95997.1 | |
IL_4V9P_395 | 1/EA/875:879, 1/EA/898:902 | No text annotation Not in a motif group | ||
IL_4V9P_396 | 1/EA/994:996, 1/EA/1159:1160 | Single bulged C Not in a motif group | homologous IL_5J7L_276 IL_61258.12 | |
IL_4V9P_397 | 1/EA/998:1002, 1/EA/1153:1157 | UAA/GAN Not in a motif group | homologous IL_4WF9_036 IL_89002.2 | |
IL_4V9P_398 | 1/EA/1004:1011, 1/EA/1150:1151 | SSU/LSU pseudoknot Not in a motif group | homologous IL_5J7L_278 IL_15861.7 | |
IL_4V9P_399 | 1/EA/1011:1013, 1/EA/1149:1150 | Single bulged U Not in a motif group | geometric IL_5J7L_279 IL_83039.13 | |
IL_4V9P_400 | 1/EA/1018:1024, 1/EA/1140:1144 | No text annotation Not in a motif group | homologous IL_4WF9_039 IL_57188.3 | |
IL_4V9P_401 | 1/EA/1024:1030, 1/EA/1124:1140 | No text annotation Not in a motif group | geometric IL_5J7L_281 IL_50715.1 | |
IL_4V9P_402 | 1/EA/1031:1034, 1/EA/1121:1123 | Isolated non-canonical cWW with bulges Not in a motif group | homologous IL_5J7L_282 IL_82068.2 | |
IL_4V9P_403 | 1/EA/1038:1041, 1/EA/1114:1117 | Tandem non-canonical cWW pairs Not in a motif group | homologous IL_5J7L_283 IL_30621.2 | |
IL_4V9P_404 | 1/EA/1043:1051, 1/EA/1108:1112 | Kink-turn Not in a motif group | homologous IL_5J7L_284 IL_90538.4 | |
IL_4V9P_406 | 1/EA/1059:1062, 1/EA/1076:1079 | No text annotation Not in a motif group | homologous IL_5J7L_285 IL_23544.2 | |
IL_4V9P_407 | 1/EA/1087:1090, 1/EA/1101:1102 | No text annotation Not in a motif group | homologous IL_6PRV_002 NA | |
IL_4V9P_408 | 1/EA/1168:1170, 1/EA/1179:1181 | No text annotation Not in a motif group | homologous IL_4WF9_043 NA | |
IL_4V9P_409 | 1/EA/1196:1198, 1/EA/1247:1250 | Isolated cWS basepair Not in a motif group | homologous IL_5J7L_286 IL_52767.2 | |
IL_4V9P_410 | 1/EA/1202:1206, 1/EA/1240:1243 | No text annotation Not in a motif group | homologous IL_5J7L_287 IL_91920.1 | |
IL_4V9P_411 | 1/EA/1208:1215, 1/EA/1234:1238 | Kink-turn Not in a motif group | homologous IL_5J7L_288 IL_70923.2 | |
IL_4V9P_412 | 1/EA/1262:1269, 1/EA/2011:2017 | 8x7 Sarcin-Ricin; G-bulge Not in a motif group | homologous IL_5J7L_289 IL_04346.7 | |
IL_4V9P_413 | 1/EA/1310:1313, 1/EA/1603:1604 | Major groove platform; stack outside cWW Not in a motif group | homologous IL_7RQB_050 IL_50694.2 | |
IL_4V9P_414 | 1/EA/1319:1323, 1/EA/1331:1333 | C-loop Not in a motif group | homologous IL_5J7L_291 IL_63596.6 | |
IL_4V9P_415 | 1/EA/1351:1355, 1/EA/1376:1380 | UAA/GAN Not in a motif group | homologous IL_5J7L_292 IL_89002.2 | |
IL_4V9P_416 | 1/EA/1357:1361, 1/EA/1370:1374 | tSH-tHW-tHS Not in a motif group | homologous IL_5J7L_293 IL_17136.1 | |
IL_4V9P_417 | 1/EA/1415:1416, 1/EA/1582:1587 | No text annotation Not in a motif group | homologous IL_5J7L_294 IL_90348.1 | |
IL_4V9P_418 | 1/EA/1417:1421, 1/EA/1577:1581 | UAA/GAN Not in a motif group | homologous IL_5J7L_295 IL_89002.2 | |
IL_4V9P_419 | 1/EA/1432:1435, 1/EA/1557:1561 | Tandem non-canonical cWW pairs Not in a motif group | homologous IL_5J7L_296 IL_55178.1 | |
IL_4V9P_420 | 1/EA/1437:1440, 1/EA/1551:1555 | tSH-tHW Not in a motif group | homologous IL_5J7L_297 IL_04059.1 | |
IL_4V9P_421 | 1/EA/1450:1451, 1/EA/1459:1461 | Single bulged U Not in a motif group | homologous IL_5J7L_298 IL_83039.13 | |
IL_4V9P_422 | 1/EA/1468:1471, 1/EA/1520:1524 | No text annotation Not in a motif group | homologous IL_5J7L_299 IL_68574.2 | |
IL_4V9P_423 | 1/EA/1474:1478, 1/EA/1513:1517 | tSH-tHW-tHS Not in a motif group | homologous IL_5J7L_300 IL_38862.1 | |
IL_4V9P_424 | 1/EA/1481:1483, 1/EA/1506:1510 | No text annotation Not in a motif group | ||
IL_4V9P_425 | 1/EA/1489:1491, 1/EA/1499:1500 | Single bulged A Not in a motif group | homologous IL_5J7L_302 IL_37497.2 | |
IL_4V9P_426 | 1/EA/1526:1529, 1/EA/1542:1546 | UAA/GAN variation Not in a motif group | homologous IL_5J7L_303 IL_07235.1 | |
IL_4V9P_427 | 1/EA/1651:1656, 1/EA/2004:2006 | No text annotation Not in a motif group | homologous IL_5J7L_304 IL_12566.2 | |
IL_4V9P_428 | 1/EA/1663:1665, 1/EA/1995:1997 | Isolated tWW turn Not in a motif group | homologous IL_5J7L_305 IL_54997.7 | |
IL_4V9P_429 | 1/EA/1666:1669, 1/EA/1993:1994 | Major groove platform; stack outside cWW Not in a motif group | geometric IL_7RQB_066 IL_50694.2 | |
IL_4V9P_430 | 1/EA/1669:1674, 1/EA/1990:1993 | Intercalated tWH Not in a motif group | homologous IL_5J7L_307 IL_82842.2 | |
IL_4V9P_431 | 1/EA/1686:1691, 1/EA/1696:1702 | tSH-tSH-tHH-tHS Not in a motif group | geometric IL_7RQB_068 IL_65969.2 | |
IL_4V9P_432 | 1/EA/1712:1718, 1/EA/1742:1746 | 6x5 Sarcin-Ricin; G-bulge Not in a motif group | homologous IL_5J7L_309 IL_88269.3 | |
IL_4V9P_433 | 1/EA/1720:1724, 1/EA/1736:1740 | UAA/GAN variation Not in a motif group | geometric IL_2R8S_006 IL_17136.1 | |
IL_4V9P_434 | 1/EA/1727:1728, 1/EA/1731:1733 | Single bulged C Not in a motif group | homologous IL_5J7L_311 IL_61258.12 | |
IL_4V9P_435 | 1/EA/1770:1771, 1/EA/1980:1982 | Single bulged A Not in a motif group | homologous IL_5J7L_312 IL_37497.2 | |
IL_4V9P_436 | 1/EA/1798:1804, 1/EA/1813:1821 | Kink-turn related Not in a motif group | homologous IL_5J7L_313 IL_17069.3 | |
IL_4V9P_437 | 1/EA/1837:1840, 1/EA/1902:1903 | Major groove outside cWW, minor groove, intercalation pocket Not in a motif group | homologous IL_5J7L_314 IL_88739.1 | |
IL_4V9P_438 | 1/EA/1841:1842, 1/EA/1898:1901 | Major groove outside cWW, minor groove, intercalation pocket Not in a motif group | homologous IL_5J7L_315 IL_16396.2 | |
IL_4V9P_439 | 1/EA/1846:1849, 1/EA/1893:1894 | Minor groove platform Not in a motif group | homologous IL_7RQB_073 IL_88739.1 | |
IL_4V9P_440 | 1/EA/1864:1867, 1/EA/1874:1878 | UAA/GAN related Not in a motif group | homologous IL_5J7L_317 IL_77691.1 | |
IL_4V9P_441 | 1/EA/1933:1934, 1/EA/1964:1967 | Multiple bulged bases Not in a motif group | geometric IL_5J7L_318 IL_59677.2 | |
IL_4V9P_442 | 1/EA/1934:1945, 1/EA/1961:1964 | No text annotation Not in a motif group | homologous IL_7A0S_072 IL_81589.2 | |
IL_4V9P_443 | 1/EA/2050:2052, 1/EA/2617:2618 | Major groove platform Not in a motif group | homologous IL_5J7L_320 IL_27635.1 | |
IL_4V9P_444 | 1/EA/2054:2056, 1/EA/2612:2615 | No text annotation Not in a motif group | homologous IL_5J7L_321 IL_54678.5 | |
IL_4V9P_445 | 1/EA/2067:2069, 1/EA/2442:2443 | Single bulged U Not in a motif group | homologous IL_7A0S_075 IL_83039.13 | |
IL_4V9P_446 | 1/EA/2070:2071, 1/EA/2438:2441 | Minor groove platform Not in a motif group | homologous IL_5J7L_324 IL_42622.2 | |
IL_4V9P_447 | 1/EA/2081:2083, 1/EA/2236:2239 | Isolated tHS basepair with bulges Not in a motif group | homologous IL_5J7L_325 IL_38958.7 | |
IL_4V9P_448 | 1/EA/2085:2087, 1/EA/2232:2234 | No text annotation Not in a motif group | homologous IL_5J7L_326 IL_95997.1 | |
IL_4V9P_449 | 1/EA/2202:2204, 1/EA/2220:2221 | Single bulged U Not in a motif group | homologous IL_5J7L_331 IL_83039.13 | |
IL_4V9P_450 | 1/EA/2350:2353, 1/EA/2364:2367 | Double sheared Not in a motif group | homologous IL_5J7L_333 IL_09705.9 | |
IL_4V9P_451 | 1/EA/2401:2403, 1/EA/2414:2415 | Single bulged U Not in a motif group | geometric IL_5LYS_008 IL_83039.13 | |
IL_4V9P_452 | 1/EA/2453:2454, 1/EA/2498:2500 | Single stack bend Not in a motif group | geometric IL_4WF9_089 IL_76488.2 | |
IL_4V9P_453 | 1/EA/2454:2455, 1/EA/2496:2498 | Major groove platform Not in a motif group | homologous IL_7RQB_092 IL_27635.1 | |
IL_4V9P_454 | 1/EA/2457:2459, 1/EA/2493:2494 | Major groove platform Not in a motif group | geometric IL_7A0S_085 IL_27635.1 | |
IL_4V9P_455 | 1/EA/2459:2461, 1/EA/2489:2493 | Major groove minor groove platform with extra cWW Not in a motif group | homologous IL_5J7L_337 IL_92788.2 | |
IL_4V9P_456 | 1/EA/2466:2470, 1/EA/2480:2484 | Triple sheared Not in a motif group | homologous IL_5J7L_338 IL_56467.8 | |
IL_4V9P_457 | 1/EA/2507:2508, 1/EA/2580:2582 | Major groove platform Not in a motif group | homologous IL_4WF9_094 IL_76223.2 | |
IL_4V9P_458 | 1/EA/2510:2512, 1/EA/2574:2578 | Isolated non-canonical cWW with bulges Not in a motif group | homologous IL_5J7L_340 IL_90933.2 | |
IL_4V9P_459 | 1/EA/2512:2513, 1/EA/2571:2574 | No text annotation Not in a motif group | geometric IL_5J7L_341 IL_71530.2 | |
IL_4V9P_460 | 1/EA/2522:2523, 1/EA/2540:2543 | Minor groove platform with intercalation Not in a motif group | homologous IL_5J7L_342 IL_95601.3 | |
IL_4V9P_461 | 1/EA/2591:2592, 1/EA/2601:2603 | Single bulged A Not in a motif group | homologous IL_5J7L_344 IL_37497.2 | |
IL_4V9P_462 | 1/EA/2636:2640, 1/EA/2774:2782 | No text annotation Not in a motif group | homologous IL_5J7L_345 IL_04638.1 | |
IL_4V9P_463 | 1/EA/2652:2658, 1/EA/2663:2668 | Sarcin-Ricin target in LSU H95; G-bulge Not in a motif group | geometric IL_5J7L_346 IL_16458.1 | |
IL_4V9P_464 | 1/EA/2680:2684, 1/EA/2725:2727 | C-loop Not in a motif group | homologous IL_5J7L_347 IL_63596.6 | |
IL_4V9P_465 | 1/EA/2687:2691, 1/EA/2718:2722 | No text annotation Not in a motif group | homologous IL_5J7L_348 IL_08296.3 | |
IL_4V9P_466 | 1/EA/2695:2696, 1/EA/2711:2714 | Multiple bulged bases Not in a motif group | homologous IL_4WF9_103 IL_71530.2 | |
IL_4V9P_467 | 1/EA/2737:2742, 1/EA/2762:2767 | UAA/GAN with extra cWW Not in a motif group | homologous IL_5J7L_350 IL_49767.5 | |
IL_4V9P_468 | 1/EA/2795:2796, 1/EA/2799:2801 | Single bulged A Not in a motif group | geometric IL_7RQB_019 IL_37497.2 | |
IL_4V9P_469 | 1/EA/2806:2811, 1/EA/2889:2892 | No text annotation Not in a motif group | homologous IL_5J7L_351 IL_49460.2 | |
IL_4V9P_470 | 1/EA/2838:2839, 1/EA/2878:2880 | Major groove intercalation Not in a motif group | homologous IL_5J7L_352 IL_16396.2 | |
IL_4V9P_471 | 1/EA/2843:2846, 1/EA/2870:2874 | Multiple bulged bases with non-canonical cWW Not in a motif group | homologous IL_5J7L_353 IL_58764.3 | |
IL_4V9P_472 | 1/EA/2847:2852, 1/EA/2865:2869 | No text annotation Not in a motif group | homologous IL_5J7L_354 IL_83162.5 | |
IL_4V9P_473 | 1/EB/17:18, 1/EB/65:67 | Major groove intercalation Not in a motif group | homologous IL_5J7L_355 IL_37497.2 | |
IL_4V9P_474 | 1/EB/23:28, 1/EB/56:60 | No text annotation Not in a motif group | homologous IL_5J7L_356 IL_18472.2 | |
IL_4V9P_475 | 1/EB/30:31, 1/EB/51:54 | Major groove minor groove platform; mini C-loop Not in a motif group | homologous IL_5J7L_357 IL_09061.6 | |
IL_4V9P_477 | 1/EB/34:38, 1/EB/44:48 | Symmetric double minor groove platform Not in a motif group | geometric IL_5J7L_358 IL_58103.6 | |
IL_4V9P_478 | 1/EB/71:79, 1/EB/97:105 | Bacterial 5S Loop E Not in a motif group | homologous IL_5J7L_359 IL_56455.3 | |
IL_4V9P_479 | 1/FA/30:32, 1/FA/552:553 | Single bulged G Not in a motif group | homologous IL_4LFB_001 IL_00225.2 | |
IL_4V9P_480 | 1/FA/44:45, 1/FA/396:398 | Single bulged A Not in a motif group | homologous IL_5J7L_002 IL_37497.2 | |
IL_4V9P_481 | 1/FA/47:52, 1/FA/359:361 | No text annotation Not in a motif group | homologous IL_5J7L_003 IL_11178.1 | |
IL_4V9P_482 | 1/FA/54:56, 1/FA/356:357 | Minor groove platform Not in a motif group | homologous IL_4LFB_004 IL_93353.1 | |
IL_4V9P_483 | 1/FA/63:66, 1/FA/103:104 | Multiple bulged bases Not in a motif group | homologous IL_5J7L_005 IL_76389.1 | |
IL_4V9P_484 | 1/FA/67:69, 1/FA/99:102 | No text annotation Not in a motif group | ||
IL_4V9P_485 | 1/FA/69:73, 1/FA/97:99 | No text annotation Not in a motif group | ||
IL_4V9P_486 | 1/FA/75:76, 1/FA/93:95 | Major groove intercalation Not in a motif group | geometric IL_5J7L_352 IL_16396.2 | |
IL_4V9P_488 | 1/FA/128:131, 1/FA/231:233 | Isolated non-canonical cWW with bulges Not in a motif group | homologous IL_5J7L_009 IL_82068.2 | |
IL_4V9P_489 | 1/FA/132:136, 1/FA/227:230 | Minor groove platform related Not in a motif group | homologous IL_5J7L_010 IL_58764.3 | |
IL_4V9P_490 | 1/FA/144:146, 1/FA/176:178 | Isolated cWH basepair Not in a motif group | homologous IL_5J7L_011 IL_51629.2 | |
IL_4V9P_491 | 1/FA/147:153, 1/FA/168:175 | tWH-tWH-tHW-tHW Not in a motif group | homologous IL_5J7L_012 IL_80604.2 | |
IL_4V9P_492 | 1/FA/203:206, 1/FA/213:214 | Minor groove platform Not in a motif group | geometric IL_3RW6_003 IL_93353.1 | |
IL_4V9P_493 | 1/FA/242:247, 1/FA/277:284 | Kink-turn with non-sequential stacking Not in a motif group | homologous IL_5J7L_014 IL_45067.2 | |
IL_4V9P_494 | 1/FA/249:252, 1/FA/274:275 | No text annotation Not in a motif group | homologous IL_5J7L_015 IL_48100.2 | |
IL_4V9P_495 | 1/FA/292:293, 1/FA/304:308 | C-loop Not in a motif group | homologous IL_5J7L_016 IL_37712.2 | |
IL_4V9P_496 | 1/FA/367:369, 1/FA/392:393 | Single bulged U Not in a motif group | homologous IL_5J7L_017 IL_83039.13 | |
IL_4V9P_497 | 1/FA/371:375, 1/FA/389:390 | C-loop Not in a motif group | homologous IL_5J7L_018 IL_75255.1 | |
IL_4V9P_498 | 1/FA/375:376, 1/FA/387:389 | Single bulged G Not in a motif group | geometric IL_5J7L_019 IL_00225.2 | |
IL_4V9P_499 | 1/FA/409:416, 1/FA/427:433 | No text annotation Not in a motif group | homologous IL_4LFB_017 IL_28026.1 | |
IL_4V9P_500 | 1/FA/440:442, 1/FA/492:497 | No text annotation Not in a motif group | homologous IL_5J7L_021 IL_22248.1 | |
IL_4V9P_501 | 1/FA/446:450, 1/FA/483:488 | tSH-tHW-tWW Not in a motif group | geometric IL_5J7L_022 IL_88269.3 | |
IL_4V9P_502 | 1/FA/450:455, 1/FA/477:483 | No text annotation Not in a motif group | homologous IL_5J7L_023 IL_70801.1 | |
IL_4V9P_503 | 1/FA/504:511, 1/FA/540:541 | SSU/LSU pseudoknot Not in a motif group | homologous IL_4LFB_020 IL_15861.7 | |
IL_4V9P_504 | 1/FA/515:521, 1/FA/528:536 | No text annotation Not in a motif group | geometric IL_4V88_415 IL_55871.1 | |
IL_4V9P_505 | 1/FA/569:575, 1/FA/880:881 | No text annotation Not in a motif group | homologous IL_4LFB_022 IL_69996.1 | |
IL_4V9P_506 | 1/FA/580:584, 1/FA/757:761 | tSH-tHW-tHS Not in a motif group | homologous IL_5J7L_027 IL_17136.1 | |
IL_4V9P_507 | 1/FA/594:596, 1/FA/644:645 | Major groove platform Not in a motif group | homologous IL_5J7L_028 IL_27635.1 | |
IL_4V9P_508 | 1/FA/597:598, 1/FA/640:643 | Major groove minor groove platform; mini C-loop Not in a motif group | homologous IL_5J7L_029 IL_09061.6 | |
IL_4V9P_509 | 1/FA/605:612, 1/FA/628:633 | No text annotation Not in a motif group | homologous IL_5J7L_030 IL_78349.1 | |
IL_4V9P_510 | 1/FA/654:655, 1/FA/751:754 | Major groove platform; stack outside cWW Not in a motif group | homologous IL_4LFB_027 IL_50694.2 | |
IL_4V9P_511 | 1/FA/658:660, 1/FA/745:748 | No text annotation Not in a motif group | geometric IL_4P3T_002 IL_46796.1 | |
IL_4V9P_512 | 1/FA/662:666, 1/FA/740:743 | Tandem non-canonical cWW pairs Not in a motif group | homologous IL_5J7L_033 IL_71110.1 | |
IL_4V9P_513 | 1/FA/684:688, 1/FA/699:706 | Kink-turn Not in a motif group | homologous IL_5J7L_035 IL_45067.2 | |
IL_4V9P_514 | 1/FA/774:778, 1/FA/804:805 | Left turn Not in a motif group | homologous IL_5J7L_036 IL_29346.1 | |
IL_4V9P_515 | 1/FA/779:783, 1/FA/799:803 | tSH-tHW-tHS Not in a motif group | homologous IL_5J7L_037 IL_17136.1 | |
IL_4V9P_516 | 1/FA/887:894, 1/FA/905:910 | 8x6 Sarcin-Ricin with inserted Y; G-bulge Not in a motif group | homologous IL_5J7L_038 IL_24606.2 | |
IL_4V9P_517 | 1/FA/922:923, 1/FA/1393:1395 | Single bulged A Not in a motif group | homologous IL_5J7L_039 IL_37497.2 | |
IL_4V9P_518 | 1/FA/925:927, 1/FA/1390:1391 | Single bulged G Not in a motif group | homologous IL_4LFB_036 IL_00225.2 | |
IL_4V9P_519 | 1/FA/933:935, 1/FA/1380:1384 | Minor groove platform Not in a motif group | homologous IL_4LFB_037 IL_47078.1 | |
IL_4V9P_520 | 1/FA/953:954, 1/FA/1226:1228 | No text annotation Not in a motif group | homologous IL_6CZR_150 NA | |
IL_4V9P_521 | 1/FA/993:997, 1/FA/1044:1045 | Minor groove platform Not in a motif group | homologous IL_5J7L_043 IL_47078.1 | |
IL_4V9P_522 | 1/FA/998:999, 1/FA/1041:1043 | Single stack bend Not in a motif group | homologous IL_5J7L_044 IL_76488.2 | |
IL_4V9P_523 | 1/FA/1048:1050, 1/FA/1208:1209 | Single bulged U Not in a motif group | homologous IL_5J7L_046 IL_83039.13 | |
IL_4V9P_524 | 1/FA/1052:1056, 1/FA/1204:1206 | Isolated cWS basepair Not in a motif group | homologous IL_4LFB_044 IL_76319.2 | |
IL_4V9P_525 | 1/FA/1057:1058, 1/FA/1199:1203 | Minor groove platform Not in a motif group | homologous IL_5J7L_048 IL_93353.1 | |
IL_4V9P_526 | 1/FA/1060:1061, 1/FA/1195:1197 | Single bulged A Not in a motif group | geometric IL_5J7L_049 IL_37497.2 | |
IL_4V9P_527 | 1/FA/1061:1063, 1/FA/1193:1195 | No text annotation Not in a motif group | homologous IL_5J7L_050 IL_95997.1 | |
IL_4V9P_529 | 1/FA/1124:1128, 1/FA/1144:1149 | No text annotation Not in a motif group | geometric IL_5J7L_051 IL_93211.1 | |
IL_4V9P_530 | 1/FA/1129:1132, 1/FA/1142:1143 | Minor groove platform Not in a motif group | homologous IL_5J7L_052 IL_15052.1 | |
IL_4V9P_531 | 1/FA/1158:1161, 1/FA/1175:1181 | No text annotation Not in a motif group | homologous IL_4LFB_050 IL_42032.1 | |
IL_4V9P_532 | 1/FA/1247:1253, 1/FA/1284:1290 | No text annotation Not in a motif group | homologous IL_5J7L_054 IL_09129.1 | |
IL_4V9P_533 | 1/FA/1255:1258, 1/FA/1277:1282 | No text annotation Not in a motif group | homologous IL_5J7L_055 IL_75461.4 | |
IL_4V9P_534 | 1/FA/1259:1263, 1/FA/1272:1276 | Triple sheared Not in a motif group | homologous IL_5J7L_056 IL_56467.8 | |
IL_4V9P_535 | 1/FA/1303:1308, 1/FA/1329:1334 | No text annotation Not in a motif group | geometric IL_5J7L_057 IL_19954.2 | |
IL_4V9P_537 | 1/FA/1399:1401, 1/FA/1501:1504 | No text annotation Not in a motif group | homologous IL_5J7L_058 IL_36143.3 | |
IL_4V9P_538 | 1/FA/1401:1404, 1/FA/1497:1501 | No text annotation Not in a motif group | geometric IL_4V88_464 IL_99670.1 | |
IL_4V9P_539 | 1/FA/1405:1407, 1/FA/1494:1496 | No text annotation Not in a motif group | geometric IL_5VCI_002 IL_95997.1 | |
IL_4V9P_540 | 1/FA/1407:1409, 1/FA/1491:1494 | Decoding loop related Not in a motif group | geometric IL_3C3Z_002 IL_64417.1 | |
IL_4V9P_541 | 1/FA/1412:1414, 1/FA/1486:1488 | No text annotation Not in a motif group | homologous IL_5J7L_061 IL_95997.1 | |
IL_4V9P_542 | 1/FA/1416:1419, 1/FA/1481:1484 | Double sheared Not in a motif group | homologous IL_5J7L_062 IL_09705.9 | |
IL_4V9P_543 | 1/FA/1430:1435, 1/FA/1466:1470 | Triple sheared related Not in a motif group | homologous IL_5J7L_063 IL_64879.2 | |
IL_4V9P_544 | 1/FA/1440:1442, 1/FA/1460:1461 | Minor groove platform Not in a motif group | homologous IL_5J7L_064 IL_42622.2 | |
IL_4V9P_545 | 1/FA/1445:1448, 1/FA/1455:1457 | No text annotation Not in a motif group | homologous IL_5J7L_065 IL_02284.5 | |
IL_4V9P_546 | 1/GA/24:30, 1/GA/510:516 | Triple sheared with non-canonical cWW Not in a motif group | homologous IL_7RQB_001 IL_66414.6 | |
IL_4V9P_547 | 1/GA/36:37, 1/GA/442:444 | Single bulged A Not in a motif group | homologous IL_5J7L_246 IL_37497.2 | |
IL_4V9P_548 | 1/GA/43:44, 1/GA/434:436 | Minor groove platform Not in a motif group | homologous IL_5J7L_247 IL_42622.2 | |
IL_4V9P_549 | 1/GA/81:85, 1/GA/97:105 | No text annotation Not in a motif group | ||
IL_4V9P_551 | 1/GA/183:184, 1/GA/212:214 | Single stack bend Not in a motif group | homologous IL_5J7L_249 IL_76488.2 | |
IL_4V9P_552 | 1/GA/188:194, 1/GA/201:208 | 8x7 Sarcin-Ricin; G-bulge Not in a motif group | homologous IL_5J7L_250 IL_04346.7 | |
IL_4V9P_553 | 1/GA/239:245, 1/GA/253:258 | 7x6 Sarcin-Ricin; G-bulge Not in a motif group | homologous IL_5J7L_251 IL_76042.2 | |
IL_4V9P_554 | 1/GA/269:271, 1/GA/366:370 | No text annotation Not in a motif group | homologous IL_5J7L_252 IL_47972.1 | |
IL_4V9P_555 | 1/GA/274:282, 1/GA/358:363 | No text annotation Not in a motif group | ||
IL_4V9P_556 | 1/GA/293:295, 1/GA/343:347 | No text annotation Not in a motif group | homologous IL_5J7L_254 IL_69440.1 | |
IL_4V9P_557 | 1/GA/481:484, 1/GA/496:509 | No text annotation Not in a motif group | homologous IL_5J7L_255 IL_60992.6 | |
IL_4V9P_558 | 1/GA/536:539, 1/GA/554:557 | Double sheared Not in a motif group | homologous IL_5J7L_256 IL_09705.9 | |
IL_4V9P_560 | 1/GA/564:566, 1/GA/575:577 | No text annotation Not in a motif group | homologous IL_5J7L_257 IL_95997.1 | |
IL_4V9P_561 | 1/GA/606:610, 1/GA/618:622 | AAA cross-strand stack Not in a motif group | homologous IL_5J7L_258 IL_17136.1 | |
IL_4V9P_562 | 1/GA/672:674, 1/GA/806:808 | No text annotation Not in a motif group | geometric IL_7RQB_017 IL_95997.1 | |
IL_4V9P_563 | 1/GA/674:678, 1/GA/799:806 | tHW-tHW cross-strand stack Not in a motif group | homologous IL_5J7L_260 IL_17470.6 | |
IL_4V9P_564 | 1/GA/697:698, 1/GA/763:765 | Single bulged A Not in a motif group | homologous IL_5J7L_261 IL_37497.2 | |
IL_4V9P_565 | 1/GA/702:703, 1/GA/728:730 | Single bulged G Not in a motif group | geometric IL_5J7L_262 IL_00225.2 | |
IL_4V9P_566 | 1/GA/703:707, 1/GA/724:728 | Triple sheared Not in a motif group | homologous IL_4WF9_024 IL_56467.8 | |
IL_4V9P_567 | 1/GA/738:740, 1/GA/757:758 | Major groove platform Not in a motif group | homologous IL_5J7L_264 IL_27635.1 | |
IL_4V9P_568 | 1/GA/775:777, 1/GA/787:791 | Multiple bulged bases Not in a motif group | geometric IL_4V9F_030 IL_90991.6 | |
IL_4V9P_570 | 1/GA/837:838, 1/GA/940:942 | Single stack bend Not in a motif group | homologous IL_5J7L_266 IL_92001.1 | |
IL_4V9P_571 | 1/GA/844:847, 1/GA/933:934 | Other IL Not in a motif group | geometric IL_5J7L_267 IL_92001.1 | |
IL_4V9P_572 | 1/GA/847:848, 1/GA/930:933 | Stack outside cWW Not in a motif group | homologous IL_5J7L_268 IL_37629.1 | |
IL_4V9P_573 | 1/GA/850:851, 1/GA/926:928 | Single stack bend Not in a motif group | homologous IL_5J7L_269 IL_76488.2 | |
IL_4V9P_574 | 1/GA/856:862, 1/GA/915:921 | 7x7 Sarcin-Ricin with intercalated A; G-bulge Not in a motif group | homologous IL_5J7L_270 IL_93830.3 | |
IL_4V9P_575 | 1/GA/862:863, 1/GA/913:915 | Minor groove platform Not in a motif group | geometric IL_7TZS_003 IL_42622.2 | |
IL_4V9P_576 | 1/GA/864:868, 1/GA/909:912 | C-loop Not in a motif group | homologous IL_5J7L_272 IL_63596.6 | |
IL_4V9P_577 | 1/GA/870:872, 1/GA/905:907 | No text annotation Not in a motif group | homologous IL_5J7L_273 IL_95997.1 | |
IL_4V9P_578 | 1/GA/875:879, 1/GA/898:902 | Triple sheared Not in a motif group | homologous IL_5J7L_274 IL_56467.8 | |
IL_4V9P_579 | 1/GA/879:882, 1/GA/894:898 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_4V88_429 IL_30621.2 | |
IL_4V9P_580 | 1/GA/994:996, 1/GA/1159:1160 | Single bulged C Not in a motif group | homologous IL_5J7L_276 IL_61258.12 | |
IL_4V9P_581 | 1/GA/998:1002, 1/GA/1153:1157 | UAA/GAN Not in a motif group | homologous IL_5J7L_277 IL_89002.2 | |
IL_4V9P_582 | 1/GA/1004:1011, 1/GA/1150:1151 | SSU/LSU pseudoknot Not in a motif group | geometric IL_5J7L_278 IL_15861.7 | |
IL_4V9P_583 | 1/GA/1011:1013, 1/GA/1149:1150 | Single bulged U Not in a motif group | homologous IL_5J7L_279 IL_83039.13 | |
IL_4V9P_584 | 1/GA/1018:1024, 1/GA/1140:1144 | No text annotation Not in a motif group | geometric IL_5J7L_280 IL_57188.3 | |
IL_4V9P_585 | 1/GA/1024:1030, 1/GA/1124:1140 | No text annotation Not in a motif group | geometric IL_5J7L_281 IL_50715.1 | |
IL_4V9P_586 | 1/GA/1031:1034, 1/GA/1121:1123 | Isolated non-canonical cWW with bulges Not in a motif group | homologous IL_5J7L_282 IL_82068.2 | |
IL_4V9P_587 | 1/GA/1038:1041, 1/GA/1114:1117 | Tandem non-canonical cWW pairs Not in a motif group | homologous IL_5J7L_283 IL_30621.2 | |
IL_4V9P_588 | 1/GA/1043:1051, 1/GA/1108:1112 | Kink-turn Not in a motif group | homologous IL_5J7L_284 IL_90538.4 | |
IL_4V9P_589 | 1/GA/1059:1063, 1/GA/1075:1079 | No text annotation Not in a motif group | geometric IL_4V9F_043 IL_30542.3 | |
IL_4V9P_590 | 1/GA/1087:1090, 1/GA/1101:1102 | Major groove platform Not in a motif group | geometric IL_4V9F_044 IL_27635.1 | |
IL_4V9P_591 | 1/GA/1196:1198, 1/GA/1247:1250 | Isolated cWS basepair Not in a motif group | homologous IL_5J7L_286 IL_52767.2 | |
IL_4V9P_592 | 1/GA/1202:1206, 1/GA/1240:1243 | No text annotation Not in a motif group | homologous IL_5J7L_287 IL_91920.1 | |
IL_4V9P_593 | 1/GA/1208:1215, 1/GA/1234:1238 | Kink-turn Not in a motif group | homologous IL_5J7L_288 IL_70923.2 | |
IL_4V9P_594 | 1/GA/1262:1269, 1/GA/2011:2017 | 8x7 Sarcin-Ricin; G-bulge Not in a motif group | homologous IL_5J7L_289 IL_04346.7 | |
IL_4V9P_595 | 1/GA/1310:1313, 1/GA/1603:1604 | Major groove platform; stack outside cWW Not in a motif group | homologous IL_7RQB_050 IL_50694.2 | |
IL_4V9P_596 | 1/GA/1319:1323, 1/GA/1331:1333 | C-loop Not in a motif group | homologous IL_5J7L_291 IL_63596.6 | |
IL_4V9P_597 | 1/GA/1351:1355, 1/GA/1376:1380 | UAA/GAN Not in a motif group | homologous IL_5J7L_292 IL_89002.2 | |
IL_4V9P_598 | 1/GA/1357:1361, 1/GA/1370:1374 | tSH-tHW-tHS Not in a motif group | homologous IL_5J7L_293 IL_17136.1 | |
IL_4V9P_599 | 1/GA/1415:1416, 1/GA/1582:1587 | No text annotation Not in a motif group | homologous IL_5J7L_294 IL_90348.1 | |
IL_4V9P_600 | 1/GA/1417:1421, 1/GA/1577:1581 | UAA/GAN Not in a motif group | homologous IL_5J7L_295 IL_89002.2 | |
IL_4V9P_601 | 1/GA/1432:1435, 1/GA/1557:1561 | Tandem non-canonical cWW pairs Not in a motif group | homologous IL_5J7L_296 IL_55178.1 | |
IL_4V9P_602 | 1/GA/1437:1440, 1/GA/1551:1555 | tSH-tHW Not in a motif group | homologous IL_5J7L_297 IL_04059.1 | |
IL_4V9P_603 | 1/GA/1450:1451, 1/GA/1459:1461 | Single bulged U Not in a motif group | geometric IL_5J7L_298 IL_83039.13 | |
IL_4V9P_604 | 1/GA/1467:1471, 1/GA/1520:1525 | tSH-tHH-tHS Not in a motif group | geometric IL_4V9F_056 IL_62654.1 | |
IL_4V9P_605 | 1/GA/1474:1479, 1/GA/1512:1517 | No text annotation Not in a motif group | ||
IL_4V9P_606 | 1/GA/1481:1483, 1/GA/1506:1510 | No text annotation Not in a motif group | ||
IL_4V9P_607 | 1/GA/1489:1491, 1/GA/1499:1500 | Single bulged A Not in a motif group | homologous IL_5J7L_302 IL_37497.2 | |
IL_4V9P_608 | 1/GA/1526:1529, 1/GA/1542:1546 | UAA/GAN variation Not in a motif group | homologous IL_5J7L_303 IL_07235.1 | |
IL_4V9P_609 | 1/GA/1651:1656, 1/GA/2004:2006 | No text annotation Not in a motif group | homologous IL_5J7L_304 IL_12566.2 | |
IL_4V9P_610 | 1/GA/1663:1665, 1/GA/1995:1997 | Isolated tWW turn Not in a motif group | homologous IL_5J7L_305 IL_54997.7 | |
IL_4V9P_611 | 1/GA/1666:1669, 1/GA/1993:1994 | Major groove platform; stack outside cWW Not in a motif group | geometric IL_7RQB_066 IL_50694.2 | |
IL_4V9P_612 | 1/GA/1669:1674, 1/GA/1990:1993 | Intercalated tWH Not in a motif group | homologous IL_5J7L_307 IL_82842.2 | |
IL_4V9P_613 | 1/GA/1686:1691, 1/GA/1696:1702 | tSH-tSH-tHH-tHS Not in a motif group | homologous IL_5J7L_308 IL_65969.2 | |
IL_4V9P_614 | 1/GA/1712:1718, 1/GA/1742:1746 | 6x5 Sarcin-Ricin; G-bulge Not in a motif group | homologous IL_5J7L_309 IL_88269.3 | |
IL_4V9P_615 | 1/GA/1720:1724, 1/GA/1736:1740 | Triple sheared Not in a motif group | homologous IL_5J7L_310 IL_56467.8 | |
IL_4V9P_616 | 1/GA/1770:1771, 1/GA/1980:1982 | Single bulged A Not in a motif group | homologous IL_4WF9_068 IL_37497.2 | |
IL_4V9P_617 | 1/GA/1798:1804, 1/GA/1813:1821 | Kink-turn related Not in a motif group | homologous IL_5J7L_313 IL_17069.3 | |
IL_4V9P_618 | 1/GA/1837:1840, 1/GA/1902:1903 | Major groove outside cWW, minor groove, intercalation pocket Not in a motif group | homologous IL_5J7L_314 IL_88739.1 | |
IL_4V9P_619 | 1/GA/1841:1842, 1/GA/1898:1901 | Major groove outside cWW, minor groove, intercalation pocket Not in a motif group | homologous IL_5J7L_315 IL_16396.2 | |
IL_4V9P_620 | 1/GA/1846:1849, 1/GA/1893:1894 | Minor groove platform Not in a motif group | homologous IL_7RQB_073 IL_88739.1 | |
IL_4V9P_621 | 1/GA/1864:1868, 1/GA/1873:1878 | No text annotation Not in a motif group | ||
IL_4V9P_622 | 1/GA/1933:1934, 1/GA/1964:1967 | Multiple bulged bases Not in a motif group | geometric IL_5J7L_318 IL_59677.2 | |
IL_4V9P_623 | 1/GA/1934:1945, 1/GA/1961:1964 | No text annotation Not in a motif group | homologous IL_7A0S_072 IL_81589.2 | |
IL_4V9P_624 | 1/GA/2050:2052, 1/GA/2617:2618 | Major groove platform Not in a motif group | homologous IL_7RQB_078 IL_27635.1 | |
IL_4V9P_625 | 1/GA/2054:2056, 1/GA/2612:2615 | No text annotation Not in a motif group | ||
IL_4V9P_626 | 1/GA/2067:2069, 1/GA/2442:2443 | Single bulged U Not in a motif group | homologous IL_7A0S_075 IL_83039.13 | |
IL_4V9P_627 | 1/GA/2070:2071, 1/GA/2438:2441 | Minor groove platform Not in a motif group | homologous IL_4WF9_081 IL_42622.2 | |
IL_4V9P_628 | 1/GA/2081:2083, 1/GA/2236:2239 | Isolated tHS basepair with bulges Not in a motif group | homologous IL_5J7L_325 IL_38958.7 | |
IL_4V9P_629 | 1/GA/2085:2087, 1/GA/2232:2234 | No text annotation Not in a motif group | homologous IL_5J7L_326 IL_95997.1 | |
IL_4V9P_630 | 1/GA/2098:2100, 1/GA/2189:2191 | No text annotation Not in a motif group | geometric IL_5UNE_004 IL_95997.1 | |
IL_4V9P_631 | 1/GA/2202:2204, 1/GA/2220:2221 | Single bulged U Not in a motif group | homologous IL_5J7L_331 IL_83039.13 | |
IL_4V9P_632 | 1/GA/2350:2353, 1/GA/2364:2367 | Double sheared Not in a motif group | homologous IL_5J7L_333 IL_09705.9 | |
IL_4V9P_633 | 1/GA/2401:2403, 1/GA/2414:2415 | No text annotation Not in a motif group | ||
IL_4V9P_634 | 1/GA/2453:2454, 1/GA/2498:2500 | Single stack bend Not in a motif group | geometric IL_4WF9_089 IL_76488.2 | |
IL_4V9P_635 | 1/GA/2454:2455, 1/GA/2496:2498 | Major groove platform Not in a motif group | homologous IL_7RQB_092 IL_27635.1 | |
IL_4V9P_636 | 1/GA/2457:2459, 1/GA/2493:2494 | Major groove platform Not in a motif group | geometric IL_7A0S_085 IL_27635.1 | |
IL_4V9P_637 | 1/GA/2459:2462, 1/GA/2488:2493 | No text annotation Not in a motif group | ||
IL_4V9P_638 | 1/GA/2466:2470, 1/GA/2480:2484 | Triple sheared Not in a motif group | homologous IL_5J7L_338 IL_56467.8 | |
IL_4V9P_639 | 1/GA/2507:2508, 1/GA/2580:2582 | Major groove platform Not in a motif group | homologous IL_7RQB_096 IL_76223.2 | |
IL_4V9P_640 | 1/GA/2510:2512, 1/GA/2574:2578 | Isolated non-canonical cWW with bulges Not in a motif group | homologous IL_5J7L_340 IL_90933.2 | |
IL_4V9P_641 | 1/GA/2512:2513, 1/GA/2571:2574 | No text annotation Not in a motif group | geometric IL_5J7L_341 IL_71530.2 | |
IL_4V9P_642 | 1/GA/2522:2523, 1/GA/2540:2543 | Minor groove platform with intercalation Not in a motif group | homologous IL_5J7L_342 IL_95601.3 | |
IL_4V9P_644 | 1/GA/2591:2592, 1/GA/2601:2603 | Single bulged A Not in a motif group | homologous IL_5J7L_344 IL_37497.2 | |
IL_4V9P_646 | 1/GA/2636:2640, 1/GA/2774:2782 | No text annotation Not in a motif group | homologous IL_5J7L_345 IL_04638.1 | |
IL_4V9P_647 | 1/GA/2652:2658, 1/GA/2663:2668 | Sarcin-Ricin target in LSU H95; G-bulge Not in a motif group | geometric IL_5J7L_346 IL_16458.1 | |
IL_4V9P_648 | 1/GA/2680:2684, 1/GA/2725:2727 | C-loop Not in a motif group | homologous IL_5J7L_347 IL_63596.6 | |
IL_4V9P_649 | 1/GA/2687:2691, 1/GA/2718:2722 | No text annotation Not in a motif group | homologous IL_5J7L_348 IL_08296.3 | |
IL_4V9P_650 | 1/GA/2695:2696, 1/GA/2711:2714 | Multiple bulged bases Not in a motif group | homologous IL_5J7L_349 IL_71530.2 | |
IL_4V9P_651 | 1/GA/2737:2742, 1/GA/2762:2767 | UAA/GAN with extra cWW Not in a motif group | homologous IL_5J7L_350 IL_49767.5 | |
IL_4V9P_652 | 1/GA/2795:2796, 1/GA/2799:2801 | Single bulged A Not in a motif group | geometric IL_7RQB_019 IL_37497.2 | |
IL_4V9P_653 | 1/GA/2806:2811, 1/GA/2889:2892 | No text annotation Not in a motif group | homologous IL_5J7L_351 IL_49460.2 | |
IL_4V9P_654 | 1/GA/2838:2839, 1/GA/2878:2880 | Major groove intercalation Not in a motif group | homologous IL_5J7L_352 IL_16396.2 | |
IL_4V9P_655 | 1/GA/2843:2846, 1/GA/2870:2874 | Multiple bulged bases with non-canonical cWW Not in a motif group | homologous IL_5J7L_353 IL_58764.3 | |
IL_4V9P_656 | 1/GA/2847:2852, 1/GA/2865:2869 | No text annotation Not in a motif group | homologous IL_5J7L_354 IL_83162.5 | |
IL_4V9P_657 | 1/GB/17:18, 1/GB/65:67 | Major groove intercalation Not in a motif group | homologous IL_5J7L_355 IL_37497.2 | |
IL_4V9P_658 | 1/GB/23:28, 1/GB/56:60 | No text annotation Not in a motif group | homologous IL_5J7L_356 IL_18472.2 | |
IL_4V9P_659 | 1/GB/30:31, 1/GB/51:54 | Major groove minor groove platform; mini C-loop Not in a motif group | homologous IL_4V9F_103 IL_09061.6 | |
IL_4V9P_660 | 1/GB/34:38, 1/GB/44:48 | Symmetric double minor groove platform Not in a motif group | geometric IL_5J7L_358 IL_58103.6 | |
IL_4V9P_661 | 1/GB/71:79, 1/GB/97:105 | Bacterial 5S Loop E Not in a motif group | homologous IL_5J7L_359 IL_56455.3 | |
IL_4V9P_662 | 1/HA/30:32, 1/HA/552:553 | Single bulged G Not in a motif group | homologous IL_5J7L_001 IL_00225.2 | |
IL_4V9P_663 | 1/HA/44:45, 1/HA/396:398 | Single bulged A Not in a motif group | homologous IL_5J7L_002 IL_37497.2 | |
IL_4V9P_664 | 1/HA/47:52, 1/HA/359:361 | No text annotation Not in a motif group | homologous IL_5J7L_003 IL_11178.1 | |
IL_4V9P_665 | 1/HA/54:56, 1/HA/356:357 | Minor groove platform Not in a motif group | homologous IL_4LFB_004 IL_93353.1 | |
IL_4V9P_666 | 1/HA/63:66, 1/HA/103:104 | Multiple bulged bases Not in a motif group | homologous IL_5J7L_005 IL_76389.1 | |
IL_4V9P_667 | 1/HA/67:69, 1/HA/99:102 | Minor groove platform with extra cWW Not in a motif group | geometric IL_5J7L_006 IL_65006.1 | |
IL_4V9P_668 | 1/HA/69:73, 1/HA/97:99 | No text annotation Not in a motif group | ||
IL_4V9P_669 | 1/HA/75:76, 1/HA/93:95 | Major groove intercalation Not in a motif group | geometric IL_5J7L_352 IL_16396.2 | |
IL_4V9P_670 | 1/HA/76:78, 1/HA/91:93 | No text annotation Not in a motif group | geometric IL_4P3U_007 IL_95997.1 | |
IL_4V9P_671 | 1/HA/128:131, 1/HA/231:233 | Isolated non-canonical cWW with bulges Not in a motif group | homologous IL_5J7L_009 IL_82068.2 | |
IL_4V9P_672 | 1/HA/132:136, 1/HA/227:230 | Minor groove platform related Not in a motif group | homologous IL_5J7L_010 IL_58764.3 | |
IL_4V9P_673 | 1/HA/144:146, 1/HA/176:178 | Isolated cWH basepair Not in a motif group | homologous IL_5J7L_011 IL_51629.2 | |
IL_4V9P_674 | 1/HA/147:153, 1/HA/168:175 | tWH-tWH-tHW-tHW Not in a motif group | homologous IL_5J7L_012 IL_80604.2 | |
IL_4V9P_675 | 1/HA/203:206, 1/HA/213:214 | No text annotation Not in a motif group | ||
IL_4V9P_676 | 1/HA/242:247, 1/HA/277:284 | Kink-turn with non-sequential stacking Not in a motif group | homologous IL_5J7L_014 IL_45067.2 | |
IL_4V9P_677 | 1/HA/249:252, 1/HA/274:275 | No text annotation Not in a motif group | homologous IL_5J7L_015 IL_48100.2 | |
IL_4V9P_678 | 1/HA/292:293, 1/HA/304:308 | C-loop Not in a motif group | homologous IL_6CZR_125 IL_37712.2 | |
IL_4V9P_679 | 1/HA/367:369, 1/HA/392:393 | Single bulged U Not in a motif group | homologous IL_4LFB_014 IL_83039.13 | |
IL_4V9P_680 | 1/HA/371:375, 1/HA/389:390 | C-loop Not in a motif group | homologous IL_5J7L_018 IL_75255.1 | |
IL_4V9P_681 | 1/HA/375:376, 1/HA/387:389 | Single bulged G Not in a motif group | geometric IL_5J7L_019 IL_00225.2 | |
IL_4V9P_682 | 1/HA/409:416, 1/HA/427:433 | No text annotation Not in a motif group | homologous IL_4LFB_017 IL_28026.1 | |
IL_4V9P_683 | 1/HA/440:442, 1/HA/492:497 | No text annotation Not in a motif group | homologous IL_5J7L_021 IL_22248.1 | |
IL_4V9P_684 | 1/HA/446:450, 1/HA/483:488 | tSH-tHW-tWW Not in a motif group | homologous IL_5J7L_022 IL_88269.3 | |
IL_4V9P_685 | 1/HA/450:455, 1/HA/477:483 | No text annotation Not in a motif group | geometric IL_5J7L_023 IL_70801.1 | |
IL_4V9P_687 | 1/HA/504:511, 1/HA/540:541 | SSU/LSU pseudoknot Not in a motif group | homologous IL_5J7L_024 IL_15861.7 | |
IL_4V9P_688 | 1/HA/515:521, 1/HA/528:536 | No text annotation Not in a motif group | geometric IL_4V88_415 IL_55871.1 | |
IL_4V9P_689 | 1/HA/569:575, 1/HA/880:881 | No text annotation Not in a motif group | homologous IL_4LFB_022 IL_69996.1 | |
IL_4V9P_690 | 1/HA/580:584, 1/HA/757:761 | tSH-tHW-tHS Not in a motif group | homologous IL_5J7L_027 IL_17136.1 | |
IL_4V9P_691 | 1/HA/594:596, 1/HA/644:645 | Major groove platform Not in a motif group | homologous IL_5J7L_028 IL_27635.1 | |
IL_4V9P_692 | 1/HA/597:598, 1/HA/640:643 | Major groove minor groove platform; mini C-loop Not in a motif group | homologous IL_5J7L_029 IL_09061.6 | |
IL_4V9P_693 | 1/HA/605:612, 1/HA/628:633 | No text annotation Not in a motif group | homologous IL_5J7L_030 IL_78349.1 | |
IL_4V9P_694 | 1/HA/654:655, 1/HA/751:754 | Major groove platform; stack outside cWW Not in a motif group | homologous IL_4LFB_027 IL_50694.2 | |
IL_4V9P_695 | 1/HA/658:659, 1/HA/746:748 | Single stack bend Not in a motif group | homologous IL_5J7L_032 IL_76488.2 | |
IL_4V9P_696 | 1/HA/662:666, 1/HA/740:743 | Tandem non-canonical cWW pairs Not in a motif group | homologous IL_5J7L_033 IL_71110.1 | |
IL_4V9P_697 | 1/HA/673:678, 1/HA/712:717 | No text annotation Not in a motif group | homologous IL_5J7L_034 IL_04668.1 | |
IL_4V9P_698 | 1/HA/684:688, 1/HA/699:706 | Kink-turn Not in a motif group | homologous IL_5J7L_035 IL_45067.2 | |
IL_4V9P_699 | 1/HA/774:778, 1/HA/804:805 | Left turn Not in a motif group | homologous IL_4LFB_032 IL_29346.1 | |
IL_4V9P_700 | 1/HA/779:783, 1/HA/799:803 | tSH-tHW-tHS Not in a motif group | homologous IL_4LFB_033 IL_17136.1 | |
IL_4V9P_701 | 1/HA/887:894, 1/HA/905:910 | 8x6 Sarcin-Ricin with inserted Y; G-bulge Not in a motif group | homologous IL_5J7L_038 IL_24606.2 | |
IL_4V9P_702 | 1/HA/922:923, 1/HA/1393:1395 | Single bulged A Not in a motif group | homologous IL_4LFB_035 IL_37497.2 | |
IL_4V9P_703 | 1/HA/925:927, 1/HA/1390:1391 | Single bulged G Not in a motif group | homologous IL_5J7L_040 IL_00225.2 | |
IL_4V9P_704 | 1/HA/933:935, 1/HA/1380:1384 | Minor groove platform Not in a motif group | homologous IL_5J7L_041 IL_47078.1 | |
IL_4V9P_705 | 1/HA/953:954, 1/HA/1226:1228 | No text annotation Not in a motif group | homologous IL_6CZR_150 NA | |
IL_4V9P_706 | 1/HA/993:997, 1/HA/1044:1045 | Minor groove platform Not in a motif group | geometric IL_5J7L_043 IL_47078.1 | |
IL_4V9P_707 | 1/HA/998:999, 1/HA/1041:1043 | Single stack bend Not in a motif group | geometric IL_5J7L_044 IL_76488.2 | |
IL_4V9P_708 | 1/HA/999:1002, 1/HA/1037:1041 | No text annotation Not in a motif group | ||
IL_4V9P_709 | 1/HA/1002:1006, 1/HA/1023:1037 | No text annotation Not in a motif group | ||
IL_4V9P_711 | 1/HA/1048:1050, 1/HA/1208:1209 | Single bulged U Not in a motif group | homologous IL_5J7L_046 IL_83039.13 | |
IL_4V9P_712 | 1/HA/1052:1057, 1/HA/1203:1206 | No text annotation Not in a motif group | ||
IL_4V9P_713 | 1/HA/1057:1058, 1/HA/1199:1203 | Minor groove platform Not in a motif group | geometric IL_5J7L_048 IL_93353.1 | |
IL_4V9P_714 | 1/HA/1060:1061, 1/HA/1195:1197 | Single bulged A Not in a motif group | homologous IL_5J7L_049 IL_37497.2 | |
IL_4V9P_715 | 1/HA/1061:1063, 1/HA/1193:1195 | No text annotation Not in a motif group | geometric IL_5J7L_050 IL_95997.1 | |
IL_4V9P_717 | 1/HA/1124:1128, 1/HA/1144:1149 | No text annotation Not in a motif group | geometric IL_5J7L_051 IL_93211.1 | |
IL_4V9P_718 | 1/HA/1129:1133, 1/HA/1141:1143 | No text annotation Not in a motif group | ||
IL_4V9P_719 | 1/HA/1158:1161, 1/HA/1175:1181 | No text annotation Not in a motif group | geometric IL_4LFB_050 IL_42032.1 | |
IL_4V9P_720 | 1/HA/1247:1253, 1/HA/1284:1290 | No text annotation Not in a motif group | homologous IL_5J7L_054 IL_09129.1 | |
IL_4V9P_721 | 1/HA/1255:1258, 1/HA/1277:1282 | No text annotation Not in a motif group | homologous IL_5J7L_055 IL_75461.4 | |
IL_4V9P_722 | 1/HA/1259:1263, 1/HA/1272:1276 | Triple sheared Not in a motif group | homologous IL_5J7L_056 IL_56467.8 | |
IL_4V9P_724 | 1/HA/1399:1401, 1/HA/1501:1504 | No text annotation Not in a motif group | geometric IL_5J7L_058 IL_36143.3 | |
IL_4V9P_725 | 1/HA/1401:1404, 1/HA/1497:1501 | No text annotation Not in a motif group | geometric IL_4V88_464 IL_99670.1 | |
IL_4V9P_726 | 1/HA/1404:1407, 1/HA/1494:1497 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_4K27_001 IL_30621.2 | |
IL_4V9P_727 | 1/HA/1407:1409, 1/HA/1491:1494 | Not an internal loop Not in a motif group | geometric IL_5VCI_005 IL_82842.2 | |
IL_4V9P_728 | 1/HA/1412:1414, 1/HA/1486:1488 | No text annotation Not in a motif group | homologous IL_5J7L_061 IL_95997.1 | |
IL_4V9P_729 | 1/HA/1416:1419, 1/HA/1481:1484 | Double sheared Not in a motif group | homologous IL_5J7L_062 IL_09705.9 | |
IL_4V9P_730 | 1/HA/1430:1435, 1/HA/1466:1470 | Triple sheared related Not in a motif group | homologous IL_5J7L_063 IL_64879.2 | |
IL_4V9P_731 | 1/HA/1440:1442, 1/HA/1460:1461 | Minor groove platform Not in a motif group | homologous IL_5J7L_064 IL_42622.2 | |
IL_4V9P_732 | 1/HA/1445:1448, 1/HA/1455:1457 | No text annotation Not in a motif group | homologous IL_5J7L_065 IL_02284.5 |
Problematic loops
# | loop id | Problem | Sequence |
---|---|---|---|
IL_4V9P_005 | No text annotation | ||
IL_4V9P_011 | No text annotation | ||
IL_4V9P_019 | No text annotation | ||
IL_4V9P_046 | No text annotation | ||
IL_4V9P_081 | No text annotation | ||
IL_4V9P_100 | No text annotation | ||
IL_4V9P_124 | No text annotation | ||
IL_4V9P_131 | Minor groove platform | ||
IL_4V9P_139 | No text annotation | ||
IL_4V9P_186 | No text annotation | ||
IL_4V9P_199 | No text annotation | ||
IL_4V9P_281 | No text annotation | ||
IL_4V9P_356 | UU cWW | ||
IL_4V9P_378 | No text annotation | ||
IL_4V9P_405 | UU cWW | ||
IL_4V9P_476 | No text annotation | ||
IL_4V9P_487 | Tandem non-canonical cWW pairs | ||
IL_4V9P_528 | No text annotation | ||
IL_4V9P_536 | No text annotation | ||
IL_4V9P_550 | No text annotation | ||
IL_4V9P_559 | No text annotation | ||
IL_4V9P_569 | No text annotation | ||
IL_4V9P_643 | No text annotation | ||
IL_4V9P_645 | UU cWW | ||
IL_4V9P_686 | No text annotation | ||
IL_4V9P_710 | Isolated cWS basepair | ||
IL_4V9P_716 | No text annotation | ||
IL_4V9P_723 | No text annotation |
Valid loops
3D | Loop id | Location | Annotation; motif group | Mapped info |
---|---|---|---|---|
J3_4V9P_001 | 1/AA/683:689, 1/AA/773:775, 1/AA/791:794 | No text annotation Not in a motif group | ||
J3_4V9P_002 | 1/AA/698:700, 1/AA/732:736, 1/AA/760:763 | No text annotation Not in a motif group | ||
J3_4V9P_003 | 1/AA/1055:1057, 1/AA/1081:1087, 1/AA/1102:1104 | No text annotation Not in a motif group | ||
J3_4V9P_004 | 1/AA/1298:1303, 1/AA/1625:1627, 1/AA/1639:1642 | No text annotation Not in a motif group | homologous J3_5J7L_041 NA | |
J3_4V9P_005 | 1/AA/1306:1309, 1/AA/1605:1611, 1/AA/1620:1622 | No text annotation Not in a motif group | homologous J3_7A0S_007 NA | |
J3_4V9P_006 | 1/AA/2091:2093, 1/AA/2196:2200, 1/AA/2223:2228 | No text annotation Not in a motif group | homologous J3_5J7L_044 NA | |
J3_4V9P_007 | 1/AA/2295:2299, 1/AA/2317:2323, 1/AA/2332:2337 | No text annotation Not in a motif group | ||
J3_4V9P_008 | 1/AA/2517:2520, 1/AA/2545:2547, 1/AA/2561:2567 | No text annotation Not in a motif group | ||
J3_4V9P_009 | 1/AA/2812:2815, 1/AA/2831:2836, 1/AA/2882:2888 | No text annotation Not in a motif group | ||
J3_4V9P_010 | 1/AB/10:16, 1/AB/68:70, 1/AB/106:110 | No text annotation Not in a motif group | homologous J3_5J7L_049 NA | |
J3_4V9P_011 | 1/BA/826:829, 1/BA/857:861, 1/BA/868:874 | No text annotation Not in a motif group | homologous J3_5J7L_004 NA | |
J3_4V9P_012 | 1/BA/936:939, 1/BA/1344:1350, 1/BA/1372:1379 | No text annotation Not in a motif group | homologous J3_4LFB_002 NA | |
J3_4V9P_013 | 1/BA/943:946, 1/BA/1235:1237, 1/BA/1337:1340 | No text annotation Not in a motif group | ||
J3_4V9P_014 | 1/BA/955:962, 1/BA/973:984, 1/BA/1221:1225 | No text annotation Not in a motif group | ||
J3_4V9P_015 | 1/BA/990:993, 1/BA/1045:1047, 1/BA/1210:1215 | No text annotation Not in a motif group | ||
J3_4V9P_016 | 1/BA/1063:1068, 1/BA/1107:1113, 1/BA/1187:1193 | No text annotation Not in a motif group | ||
J3_4V9P_017 | 1/BA/1116:1118, 1/BA/1155:1158, 1/BA/1181:1184 | No text annotation Not in a motif group | ||
J3_4V9P_018 | 1/BA/1237:1241, 1/BA/1296:1303, 1/BA/1334:1337 | No text annotation Not in a motif group | ||
J3_4V9P_019 | 1/CA/683:689, 1/CA/773:775, 1/CA/791:794 | No text annotation Not in a motif group | ||
J3_4V9P_020 | 1/CA/698:700, 1/CA/732:736, 1/CA/760:763 | No text annotation Not in a motif group | ||
J3_4V9P_021 | 1/CA/1055:1057, 1/CA/1081:1087, 1/CA/1102:1104 | No text annotation Not in a motif group | ||
J3_4V9P_022 | 1/CA/1298:1303, 1/CA/1625:1627, 1/CA/1639:1642 | No text annotation Not in a motif group | homologous J3_5J7L_041 NA | |
J3_4V9P_023 | 1/CA/1306:1309, 1/CA/1605:1611, 1/CA/1620:1622 | No text annotation Not in a motif group | homologous J3_7A0S_007 NA | |
J3_4V9P_024 | 1/CA/2091:2093, 1/CA/2196:2200, 1/CA/2223:2228 | No text annotation Not in a motif group | homologous J3_5J7L_044 NA | |
J3_4V9P_025 | 1/CA/2295:2299, 1/CA/2317:2323, 1/CA/2332:2337 | No text annotation Not in a motif group | ||
J3_4V9P_026 | 1/CA/2517:2520, 1/CA/2545:2547, 1/CA/2561:2567 | No text annotation Not in a motif group | homologous J3_5J7L_046 NA | |
J3_4V9P_027 | 1/CA/2812:2815, 1/CA/2831:2836, 1/CA/2882:2888 | No text annotation Not in a motif group | ||
J3_4V9P_028 | 1/CB/10:16, 1/CB/68:70, 1/CB/106:110 | No text annotation Not in a motif group | homologous J3_5J7L_049 NA | |
J3_4V9P_029 | 1/DA/826:829, 1/DA/857:861, 1/DA/868:874 | No text annotation Not in a motif group | homologous J3_5J7L_004 NA | |
J3_4V9P_030 | 1/DA/936:939, 1/DA/1344:1350, 1/DA/1372:1379 | No text annotation Not in a motif group | homologous J3_4LFB_002 NA | |
J3_4V9P_031 | 1/DA/943:946, 1/DA/1235:1237, 1/DA/1337:1340 | No text annotation Not in a motif group | ||
J3_4V9P_032 | 1/DA/955:962, 1/DA/973:984, 1/DA/1221:1225 | No text annotation Not in a motif group | ||
J3_4V9P_033 | 1/DA/990:993, 1/DA/1045:1047, 1/DA/1210:1215 | No text annotation Not in a motif group | ||
J3_4V9P_034 | 1/DA/1003:1007, 1/DA/1022:1028, 1/DA/1033:1037 | No text annotation Not in a motif group | ||
J3_4V9P_035 | 1/DA/1063:1068, 1/DA/1107:1113, 1/DA/1187:1193 | No text annotation Not in a motif group | ||
J3_4V9P_036 | 1/DA/1116:1118, 1/DA/1155:1158, 1/DA/1181:1184 | No text annotation Not in a motif group | ||
J3_4V9P_037 | 1/DA/1237:1241, 1/DA/1296:1303, 1/DA/1334:1337 | No text annotation Not in a motif group | ||
J3_4V9P_038 | 1/EA/683:689, 1/EA/773:775, 1/EA/791:794 | No text annotation Not in a motif group | ||
J3_4V9P_039 | 1/EA/698:700, 1/EA/732:736, 1/EA/760:763 | No text annotation Not in a motif group | ||
J3_4V9P_040 | 1/EA/1055:1057, 1/EA/1081:1087, 1/EA/1102:1104 | No text annotation Not in a motif group | ||
J3_4V9P_041 | 1/EA/1298:1303, 1/EA/1625:1627, 1/EA/1639:1642 | No text annotation Not in a motif group | homologous J3_5J7L_041 NA | |
J3_4V9P_042 | 1/EA/1306:1309, 1/EA/1605:1611, 1/EA/1620:1622 | No text annotation Not in a motif group | homologous J3_7A0S_007 NA | |
J3_4V9P_043 | 1/EA/2091:2093, 1/EA/2196:2200, 1/EA/2223:2228 | No text annotation Not in a motif group | homologous J3_5J7L_044 NA | |
J3_4V9P_044 | 1/EA/2295:2299, 1/EA/2317:2323, 1/EA/2332:2337 | No text annotation Not in a motif group | ||
J3_4V9P_045 | 1/EA/2517:2520, 1/EA/2545:2547, 1/EA/2561:2567 | No text annotation Not in a motif group | homologous J3_5J7L_046 NA | |
J3_4V9P_046 | 1/EA/2812:2815, 1/EA/2831:2836, 1/EA/2882:2888 | No text annotation Not in a motif group | ||
J3_4V9P_047 | 1/EB/10:16, 1/EB/68:70, 1/EB/106:110 | No text annotation Not in a motif group | homologous J3_5J7L_049 NA | |
J3_4V9P_048 | 1/FA/826:829, 1/FA/857:861, 1/FA/868:874 | No text annotation Not in a motif group | homologous J3_5J7L_004 NA | |
J3_4V9P_049 | 1/FA/936:939, 1/FA/1344:1350, 1/FA/1372:1379 | No text annotation Not in a motif group | homologous J3_4LFB_002 NA | |
J3_4V9P_050 | 1/FA/943:946, 1/FA/1235:1237, 1/FA/1337:1340 | No text annotation Not in a motif group | ||
J3_4V9P_051 | 1/FA/955:962, 1/FA/973:984, 1/FA/1221:1225 | No text annotation Not in a motif group | ||
J3_4V9P_052 | 1/FA/990:993, 1/FA/1045:1047, 1/FA/1210:1215 | No text annotation Not in a motif group | ||
J3_4V9P_053 | 1/FA/1003:1006, 1/FA/1023:1027, 1/FA/1034:1037 | No text annotation Not in a motif group | ||
J3_4V9P_054 | 1/FA/1063:1068, 1/FA/1107:1113, 1/FA/1187:1193 | No text annotation Not in a motif group | ||
J3_4V9P_055 | 1/FA/1116:1118, 1/FA/1155:1158, 1/FA/1181:1184 | No text annotation Not in a motif group | ||
J3_4V9P_056 | 1/FA/1237:1241, 1/FA/1296:1303, 1/FA/1334:1337 | No text annotation Not in a motif group | homologous J3_4LFB_009 NA | |
J3_4V9P_057 | 1/GA/683:689, 1/GA/773:775, 1/GA/791:794 | No text annotation Not in a motif group | homologous J3_5J7L_038 NA | |
J3_4V9P_058 | 1/GA/698:700, 1/GA/732:736, 1/GA/760:763 | No text annotation Not in a motif group | ||
J3_4V9P_059 | 1/GA/1055:1057, 1/GA/1081:1087, 1/GA/1102:1104 | No text annotation Not in a motif group | homologous J3_5J7L_040 NA | |
J3_4V9P_060 | 1/GA/1298:1303, 1/GA/1625:1627, 1/GA/1639:1642 | No text annotation Not in a motif group | homologous J3_5J7L_041 NA | |
J3_4V9P_061 | 1/GA/1306:1309, 1/GA/1605:1611, 1/GA/1620:1622 | No text annotation Not in a motif group | homologous J3_7A0S_007 NA | |
J3_4V9P_062 | 1/GA/2091:2093, 1/GA/2196:2200, 1/GA/2223:2228 | No text annotation Not in a motif group | homologous J3_5J7L_044 NA | |
J3_4V9P_063 | 1/GA/2295:2299, 1/GA/2317:2323, 1/GA/2332:2337 | No text annotation Not in a motif group | ||
J3_4V9P_064 | 1/GA/2517:2520, 1/GA/2545:2547, 1/GA/2561:2567 | No text annotation Not in a motif group | homologous J3_5J7L_046 NA | |
J3_4V9P_065 | 1/GA/2812:2815, 1/GA/2831:2836, 1/GA/2882:2888 | No text annotation Not in a motif group | ||
J3_4V9P_066 | 1/GB/10:16, 1/GB/68:70, 1/GB/106:110 | No text annotation Not in a motif group | homologous J3_5J7L_049 NA | |
J3_4V9P_067 | 1/HA/826:829, 1/HA/857:861, 1/HA/868:874 | No text annotation Not in a motif group | homologous J3_5J7L_004 NA | |
J3_4V9P_068 | 1/HA/936:939, 1/HA/1344:1350, 1/HA/1372:1379 | No text annotation Not in a motif group | homologous J3_4LFB_002 NA | |
J3_4V9P_069 | 1/HA/943:946, 1/HA/1235:1237, 1/HA/1337:1340 | No text annotation Not in a motif group | homologous J3_5J7L_005 NA | |
J3_4V9P_070 | 1/HA/955:962, 1/HA/973:984, 1/HA/1221:1225 | No text annotation Not in a motif group | ||
J3_4V9P_071 | 1/HA/990:993, 1/HA/1045:1047, 1/HA/1210:1215 | No text annotation Not in a motif group | homologous J3_5J7L_007 NA | |
J3_4V9P_072 | 1/HA/1063:1068, 1/HA/1107:1113, 1/HA/1187:1193 | No text annotation Not in a motif group | ||
J3_4V9P_073 | 1/HA/1116:1118, 1/HA/1155:1158, 1/HA/1181:1184 | No text annotation Not in a motif group | homologous J3_5J7L_010 NA |
Problematic loops
No problematic loops
Coloring options: