Internal Loop Motif Atlas Release 3.88

#	Motif	Num Nts	Instances
1	IL_64928.1 View exemplar Basepair signature: cWW-cWW-cWW History status: New id, > 2 parents Isolated non-canonical cWW (257) Isolated near basepair (5) CC cWW (1)	6	263
2	IL_37497.8 View exemplar Basepair signature: cWW-L-cWW History status: Updated, 2 parents Single bulged A (119) Major groove intercalation (6)	5	125
3	IL_83039.18 View exemplar Basepair signature: cWW-L-cWW History status: Updated, 1 parent Single bulged U (118) Major groove intercalation (4)	5	122
4	IL_00225.5 View exemplar Basepair signature: cWW-L-cWW History status: Updated, 1 parent Single bulged G (44) Major groove intercalation (2) Stack outside cWW (1)	5	47
5	IL_61258.13 View exemplar Basepair signature: cWW-L-cWW History status: Exact match Single bulged C (39) Major groove intercalation (1)	5	40
6	IL_27635.5 View exemplar Basepair signature: cWW-cSH-cWW History status: Updated, 1 parent Major groove platform (38)	5	38
7	IL_09705.12 View exemplar Basepair signature: cWW-tSH-tHS-cWW History status: Updated, 1 parent Double sheared (32) Double sheared; A in syn (3)	8	35
8	IL_66171.1 View exemplar Basepair signature: cWW-cHW-cWW History status: New id, 2 parents Isolated cWH basepair (31) Other IL (1)	6	32
9	IL_70923.4 View exemplar Basepair signature: cWW-tSS-tSH-L-tHS-tHS-cWW History status: Updated, 1 parent Kink-turn (31)	12	31
10	IL_42622.6 View exemplar Basepair signature: cWW-cSH-cWW History status: Updated, 1 parent Minor groove platform (20)	5	27
11	IL_50694.3 View exemplar Basepair signature: cWW-tSH-cWW-L History status: Exact match Major groove platform; stack outside cWW (24)	6	27
12	IL_92880.1 View exemplar Basepair signature: cWW-cWW History status: New id, 1 parent Multiple bulged bases (8) Major groove outside cWW, minor groove, intercalation pocket (4) Basepair outside cWW (3) Major groove intercalation (2) Major groove outside cWW, intercalation pocket (1) Stack outside cWW (1)	4	24
13	IL_17136.3 View exemplar Basepair signature: cWW-tSH-tHW-tHS-cWW History status: Updated, 2 parents tSH-tHW-tHS (13) AAA cross-strand stack (4) UAA/GAN variation (1) UAA/GAN related (1)	10	23
14	IL_11389.1 View exemplar Basepair signature: cWW-L-cWW History status: New id, 2 parents Single stack bend (14) Single base bend (1)	5	22
15	IL_73915.1 View exemplar Basepair signature: cWW-L-R-cWW-cWW History status: New id, 1 parent Tandem non-canonical cWW pairs (14)	8	21
16	IL_67809.1 View exemplar Basepair signature: cWW-L-cWW History status: New id, 1 parent Single stack bend (13) Not an internal loop (1) Single stack bend with bulge (1)	5	21
17	IL_86432.1 View exemplar Basepair signature: cWW-cWW-cWW-cWW History status: New id, 1 parent Tandem non-canonical cWW pairs (21)	8	21
18	IL_89002.3 View exemplar Basepair signature: cWW-tWH-R-L-tHS-cWW History status: Exact match UAA/GAN (13)	9	20
19	IL_32955.1 View exemplar Basepair signature: cWW-cWW-cWW-cWW History status: New id, 2 parents Tandem non-canonical cWW pairs (13)	8	20
20	IL_59677.4 View exemplar Basepair signature: cWW-cWW History status: Updated, 2 parents Multiple bulged bases (5) Bulged stacked bases (5)	4	20
21	IL_27267.1 View exemplar Basepair signature: cWW-L-R-cWW History status: New id, 2 parents Isolated cWH basepair (2)	6	19
22	IL_99483.1 View exemplar Basepair signature: cWW-cWW History status: New id, 2 parents Multiple bulged bases (6) Basepair outside cWW, intercalation pocket (5) Intercalation pocket (1)	4	17
23	IL_64417.3 View exemplar Basepair signature: cWW-L-cWW History status: Updated, 2 parents Decoding loop related (12)	5	17
24	IL_24807.1 View exemplar Basepair signature: cWW-cWW History status: New id, > 2 parents Multiple bulged bases (9) Bulged stacked bases (1)	4	17
25	IL_09061.10 View exemplar Basepair signature: cWW-cWS-cSH-cWW History status: Updated, 1 parent Major groove minor groove platform; mini C-loop (13)	6	16
26	IL_63596.8 View exemplar Basepair signature: cWW-cWS-cSH-tWH-cWW-L History status: Updated, 1 parent C-loop (12)	7	15
27	IL_04346.8 View exemplar Basepair signature: cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW History status: Exact match 8x7 Sarcin-Ricin; G-bulge (13)	15	15
28	IL_80097.3 View exemplar Basepair signature: cWW-tHS-cWW History status: Updated, 2 parents Minor groove platform (11) Not an internal loop (1)	5	15
29	IL_45067.4 View exemplar Basepair signature: cWW-tSS-tSH-L-R-R-L-cWW-L History status: Updated, 1 parent Kink-turn (7) Kink-turn with non-sequential stacking (5)	12	14
30	IL_12554.1 View exemplar Basepair signature: cWW-cWW-cWW History status: New id, 1 parent Isolated non-canonical cWW (8)	6	14
31	IL_95716.1 View exemplar Basepair signature: cWW-tSH-tHS-tHS-cWW History status: New id, 2 parents Triple sheared (12)	10	14
32	IL_74602.1 View exemplar Basepair signature: cWW-cWW-cWW History status: New id, > 2 parents Isolated non-canonical cWW (2)	6	14
33	IL_93341.2 View exemplar Basepair signature: cWW-L-R-cSH-cSH-cWW History status: Updated, 1 parent 8-nt loop receptor (5)	8	13
34	IL_05564.4 View exemplar Basepair signature: cWW-cSH-cWW-cWW History status: Updated, 1 parent Major groove platform with extra cWW (7)	7	13
35	IL_45612.5 View exemplar Basepair signature: cWW-L-R-L-cWW-L History status: Updated, 1 parent	8	13
36	IL_04059.2 View exemplar Basepair signature: cWW-tWH-tHS-cWW History status: Exact match tSH-tHW (9) Other IL (1)	8	13
37	IL_71110.2 View exemplar Basepair signature: cWW-cWW-cWW-cWW History status: Updated, 2 parents Tandem non-canonical cWW pairs (8)	8	13
38	IL_68582.1 View exemplar Basepair signature: cWW-L-cWW History status: New id, > 2 parents Intercalated tWH (5) Stack and bulge (2) Intercalated cWW (2) Decoding loop related (1)	5	13
39	IL_54650.1 View exemplar Basepair signature: cWW-cWW-cWW History status: New id, 2 parents Isolated non-canonical cWW with bulges (4) Isolated non-canonical cWW (3)	6	12
40	IL_95601.5 View exemplar Basepair signature: cWW-L-cWW History status: Updated, 1 parent Major groove platform with intercalation (7) Minor groove platform (1) Major groove platform (1)	5	11
41	IL_64231.1 View exemplar Basepair signature: cWW-cWW-L-R-L-cWW History status: New id, > 2 parents Minor groove platform related (3) Tandem non-canonical cWW pairs (2) Decoding loop related (1) UAA/GAN variation (1) Multiple bulged bases with non-canonical cWW (1)	9	11
42	IL_27844.3 View exemplar Basepair signature: cWW-L-R-cWW History status: Updated, 1 parent Decoding loop related (1) Decoding loop with one bulged A (1) Other IL (1)	6	11
43	IL_53448.1 View exemplar Basepair signature: cWW-tWH-cSH-cWW History status: Exact match Receptor of 11-nt loop-receptor motif (11)	8	11
44	IL_88739.4 View exemplar Basepair signature: cWW-L-cWW History status: Exact match Major groove outside cWW, minor groove, intercalation pocket (6) Major groove minor groove platform; mini C-loop (1)	5	11
45	IL_66578.1 View exemplar Basepair signature: cWW-cWW History status: New id, 2 parents Multiple bulged bases (4) Stack outside cWW (2) Major groove platform outside cWW (2) Major groove outside cWW, minor groove, intercalation pocket (1)	4	11
46	IL_69229.1 View exemplar Basepair signature: cWW-tSS-tSH-L-tHS-cWW-cWW History status: New id, 1 parent Kink-turn (5)	12	11
47	IL_56185.1 View exemplar Basepair signature: cWW-cWW-cWW History status: New id, 2 parents Isolated non-canonical cWW (3) Self complementary (1)	6	10
48	IL_76223.4 View exemplar Basepair signature: cWW-cHH-cWW History status: Updated, 1 parent Major groove platform (6)	5	10
49	IL_47499.1 View exemplar Basepair signature: cWW-L-cWW-cWW History status: New id, 1 parent Major groove minor groove platform with extra cWW (6)	7	10
50	IL_38958.9 View exemplar Basepair signature: cWW-tHS-cWW History status: Updated, 1 parent Isolated tHS basepair with bulges (7)	6	10
51	IL_32711.1 View exemplar Basepair signature: cWW-cWW-cWW-cWW-cWW History status: New id, 1 parent	10	9
52	IL_35199.1 View exemplar Basepair signature: cWW-L-R-cWW-cWW History status: New id, 2 parents Tandem non-canonical cWW pairs (5)	8	9
53	IL_08257.1 View exemplar Basepair signature: cWW-L-R-tSH-tHS-cWW History status: New id, 2 parents Triple sheared (8) Triple sheared related (1)	10	9
54	IL_51265.2 View exemplar Basepair signature: cWW-tSS-tSH-L-tHS-cWW History status: Exact match Kink-turn from U4 (5) Kink-turn (3) Kink-turn from T-box riboswitch (1)	10	9
55	IL_77691.2 View exemplar Basepair signature: cWW-tSH-tHS-L-cWW History status: Exact match UAA/GAN variation (3) UAA/GAN related (2) UAA/GAN (1)	9	9
56	IL_76042.3 View exemplar Basepair signature: cWW-tSH-tHH-cSH-tWH-tHS-cWW History status: Exact match 7x6 Sarcin-Ricin; G-bulge (6) Sarcin-Ricin target in LSU H95; G-bulge (1)	13	9
57	IL_85666.1 View exemplar Basepair signature: cWW-cWW History status: New id, > 2 parents Multiple bulged bases (4) Minor groove platform (1) Major groove outside cWW, minor groove, intercalation pocket (1) Single bulged A (1)	4	9
58	IL_44546.2 View exemplar Basepair signature: cWW-cWW History status: Exact match Multiple bulged bases (5) Bulged stacked bases (1)	4	9
59	IL_58103.8 View exemplar Basepair signature: cWW-cSH-cWS-L-tSW-cWW History status: Updated, 1 parent Symmetric double minor groove platform (5) Minor groove platform (1)	8	9
60	IL_73554.1 View exemplar Basepair signature: cWW-cWS-cWW History status: New id, 1 parent Isolated cWS basepair (5)	6	9
61	IL_19389.6 View exemplar Basepair signature: cWW-L-cWW-cSH History status: Exact match Major groove platform with intercalated tWH (5) Other IL (1)	6	9
62	IL_48100.3 View exemplar Basepair signature: cWW-L-cWW History status: Updated, 1 parent 180 degree turn (1)	5	8
63	IL_67767.1 View exemplar Basepair signature: cWW-tWH-cWW-cSH-cWW History status: New id, 1 parent Receptor of 11-nt loop-receptor motif (2)	9	8
64	IL_75255.1 View exemplar Basepair signature: cWW-cSH-cWS-cSH-tWH-cWW History status: Exact match C-loop (8)	7	8
65	IL_93820.1 View exemplar Basepair signature: cWW-L-R-tSH-tHS-cWW History status: New id, 1 parent Triple sheared (6)	10	8
66	IL_21175.1 View exemplar Basepair signature: cWW-cWW-cWW History status: New id, 2 parents Isolated non-canonical cWW with bulges (3) Isolated non-canonical cWW (1) Isolated basepair with bulged bases (1)	6	8
67	IL_07235.3 View exemplar Basepair signature: cWW-tSH-L-tHS-cWW History status: Updated, 1 parent UAA/GAN variation (3) UAA/GAN (2)	9	8
68	IL_54997.8 View exemplar Basepair signature: cWW-tWW-cWW History status: Exact match Isolated tWW turn (5)	6	8
69	IL_15052.1 View exemplar Basepair signature: cWW-cSH-cWS-cWW History status: Exact match Minor groove platform (7)	6	7
70	IL_33104.1 View exemplar Basepair signature: cWW-L-R-cWW History status: New id, 2 parents Isolated near basepair (2)	6	7
71	IL_17470.7 View exemplar Basepair signature: cWW-tWW-L-R-tWH-L-cWW History status: Exact match tHW-tHW cross-strand stack (5)	11	7
72	IL_38186.2 View exemplar Basepair signature: cWW-cWW History status: Updated, 1 parent Major groove outside cWW, minor groove, intercalation pocket (2)	4	7
73	IL_22854.1 View exemplar Basepair signature: cWW-tSH-cWW-tHW-cWW-L-L-R-L History status: New id, no parents	13	7
74	IL_56455.5 View exemplar Basepair signature: cWW-tSH-tHW-L-R-L-R-L-R-tWH-tHS-cWW History status: Updated, 1 parent Bacterial 5S Loop E (5)	18	7
75	IL_15261.1 View exemplar Basepair signature: cWW-L-cWW-L-L-R-cSH History status: New id, 1 parent SSU/LSU pseudoknot (7)	10	7
76	IL_65969.4 View exemplar Basepair signature: cWW-tSH-L-R-tHH-tHS-cWW History status: Updated, 1 parent tSH-tSH-tHH-tHS (5)	12	7
77	IL_36718.1 View exemplar Basepair signature: cWW-cWH-cWW History status: New id, 1 parent Isolated cWH basepair (2) cWH basepair with bulged bases (1)	6	7
78	IL_59477.1 View exemplar Basepair signature: cWW-L-cWS-cWW History status: New id, 2 parents Other IL (1)	7	7
79	IL_30659.1 View exemplar Basepair signature: cWW-L-cWW-cWW History status: New id, 2 parents Minor groove platform with extra cWW (1)	7	7
80	IL_66414.7 View exemplar Basepair signature: cWW-L-R-tSH-tSH-tHS-cWW-cWW History status: Exact match Triple sheared with non-canonical cWW (6)	14	7
81	IL_16458.2 View exemplar Basepair signature: cWW-L-R-L-R-cSH-tWH-tHS-cWW History status: Exact match Sarcin-Ricin target in LSU H95; G-bulge (3) 7x6 Sarcin-Ricin with UU cWW pair; G-bulge (1) 8x6 Sarcin-Ricin with inserted A; G-bulge (1) 7x6 Sarcin-Ricin; G-bulge (1)	13	7
82	IL_25186.2 View exemplar Basepair signature: cWW-L-R-L-R-cWW-cWW History status: Updated, 1 parent	10	7
83	IL_58179.1 View exemplar Basepair signature: cWW-cWW-cWW-cWW History status: New id, 2 parents Tandem non-canonical cWW pairs (5)	8	7
84	IL_37712.2 View exemplar Basepair signature: cWW-L-cWW-L-L History status: Exact match C-loop (4) Major groove minor groove platform with tHH (3)	7	7
85	IL_60992.7 View exemplar Basepair signature: cWW-cWS-tSH-L-tHH-tWH-cWW-tSS-tSH-L-L History status: Exact match	16	6
86	IL_63450.4 View exemplar Basepair signature: cWW-cWW-cSH-cWW History status: Updated, 1 parent Major groove platform with extra pair (2)	7	6
87	IL_22491.1 View exemplar Basepair signature: cWW-L-R-L-cWW History status: New id, 2 parents	7	6
88	IL_47078.2 View exemplar Basepair signature: cWW-cWS-L-cWW-L History status: Updated, 1 parent Minor groove platform (5)	7	6
89	IL_36388.1 View exemplar Basepair signature: cWW-tHS-cWW History status: New id, 1 parent Minor groove platform (4)	5	6
90	IL_90538.5 View exemplar Basepair signature: cWW-tSS-tSS-tSH-L-tHS-R-cWW-L-L History status: Exact match Kink-turn (4)	13	6
91	IL_20089.1 View exemplar Basepair signature: cWW-L-cWW History status: New id, 2 parents Single stack bend (2)	5	6
92	IL_90991.8 View exemplar Basepair signature: cWW-cWW History status: Updated, 1 parent Multiple bulged bases (4)	4	6
93	IL_54678.6 View exemplar Basepair signature: cWW-cWW History status: Updated, 2 parents Other IL (1) Major groove platform with intercalation (1)	4	6
94	IL_71241.1 View exemplar Basepair signature: cWW-tSH-L-cWW-L History status: New id, 2 parents Isolated tHS basepair with bulges (3)	8	6
95	IL_04650.1 View exemplar Basepair signature: cWW-cSH-cWW-L-L-R-L History status: Exact match Minor groove platform (2)	9	6
96	IL_69145.2 View exemplar Basepair signature: cWW-L-R-L-cWW History status: Updated, 2 parents Pseudoknot (3)	7	6
97	IL_49767.7 View exemplar Basepair signature: cWW-cWW-tWH-L-tHS-cWW History status: Updated, 1 parent UAA/GAN with extra cWW (4)	11	6
98	IL_55178.2 View exemplar Basepair signature: cWW-cWW-tWW-cWW History status: Updated, 1 parent tWW and non-canonical cWW (1) Tandem non-canonical cWW pairs (1) Non canonical cWW and near pair (1) tWW and near cWH (1)	8	5
99	IL_17069.4 View exemplar Basepair signature: cWW-tSH-tHH-cSS-tWW-tHH-tSS-cWW History status: Exact match Kink-turn related (4)	13	5
100	IL_02509.2 View exemplar Basepair signature: cWW-tSW-cWS-cSH-tWH-R-R-cWW History status: Exact match C-loop with bulged stacked A's (3) C-loop (1)	9	5
101	IL_76636.1 View exemplar Basepair signature: cWW-L-R-cWW History status: New id, 1 parent	6	5
102	IL_65510.1 View exemplar Basepair signature: cWW-L-cWW-L-L-R-L History status: Exact match	9	5
103	IL_37842.1 View exemplar Basepair signature: cWW-L-R-L-R-L-cWW-cWW History status: New id, 2 parents Triple sheared related (2)	11	5
104	IL_12566.3 View exemplar Basepair signature: cWW-L-tHS-L-cWW-L History status: Exact match	9	5
105	IL_59221.1 View exemplar Basepair signature: cWW-L-cSW-cWW History status: New id, 2 parents Other IL (1)	7	5
106	IL_65718.1 View exemplar Basepair signature: cWW-cSH-cWS-cWW-cWW History status: New id, 1 parent	9	5
107	IL_54177.1 View exemplar Basepair signature: cWW-cSW-tWH-L-R-L-R-tHS-cWW History status: New id, 1 parent Kink-turn related (5)	13	5
108	IL_61438.1 View exemplar Basepair signature: cWW-L-cWW History status: New id, 1 parent	5	5
109	IL_57188.4 View exemplar Basepair signature: cWW-cSH-tWW-L-tWW-cWW-cSH History status: Exact match Kink-turn related (5)	11	5
110	IL_51880.1 View exemplar Basepair signature: cWW-tSS-tSH-L-R-R-L-cWW-L History status: New id, 2 parents Kink-turn (5)	12	5
111	IL_47263.2 View exemplar Basepair signature: cWW-tSH-cSH-cWW History status: Exact match Major groove platform with extra pair (5)	7	5
112	IL_45944.3 View exemplar Basepair signature: cWW-L-cWW-L-tWH-L-R-L History status: Exact match	11	5
113	IL_66080.1 View exemplar Basepair signature: cWW-cWW-tSH-L-cWW-L History status: New id, 1 parent	13	5
114	IL_88428.1 View exemplar Basepair signature: cWW-cWW-tSH-L-R-L-cWW History status: New id, 1 parent	11	5
115	IL_04638.2 View exemplar Basepair signature: cWW-tSH-tHW-tHS-cSH-cWW-L History status: Exact match tSH-tHS-tHW (2)	13	5
116	IL_38862.3 View exemplar Basepair signature: cWW-cSH-R-tWH-tHS-cWW History status: Updated, 1 parent tSH-tHW-tHS (2) 5x5 Sarcin-Ricin with intercalated A; G-bulge (1)	10	5
117	IL_62552.2 View exemplar Basepair signature: cWW-L-cWW-L-L-R-L History status: Updated, 1 parent	9	5
118	IL_16386.1 View exemplar Basepair signature: cWW-L-cWW History status: Exact match Intercalated cWS (1)	5	5
119	IL_71457.1 View exemplar Basepair signature: cWW-L-cWW-L-L-R-cSH History status: New id, 1 parent SSU/LSU pseudoknot (4)	10	5
120	IL_97255.1 View exemplar Basepair signature: cWW-tSH-L-cWW-L History status: New id, 1 parent Isolated basepair with bulged bases (3) Minor groove platform with extra cWW (1)	8	5
121	IL_02284.8 View exemplar Basepair signature: cWW-L-R-L-cWW History status: Updated, 2 parents Decoding loop related (1)	7	5
122	IL_32449.1 View exemplar Basepair signature: cWW-cWW-L-R-L-R-L-R-cWW History status: New id, 2 parents tSH-tHW-tHS-cWW (1) Double sheared; A in syn; two near cWW pairs (1) Triple sheared related (1)	12	5
123	IL_83162.7 View exemplar Basepair signature: cWW-tSH-L-tHH-L-cWW History status: Updated, 1 parent tHS double platform (2)	10	5
124	IL_04797.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-L-R-cWW History status: New id, 1 parent	14	4
125	IL_50715.2 View exemplar Basepair signature: cWW-tSH-tHH-L-R-L-R-cSH-tWW-cWW-L-L-L-R-L History status: Exact match	21	4
126	IL_29346.1 View exemplar Basepair signature: cWW-L-cWW-L-L History status: Exact match Left turn (3)	7	4
127	IL_46607.1 View exemplar Basepair signature: cWW-cWW-cWW-cWW History status: New id, 1 parent	8	4
128	IL_55953.3 View exemplar Basepair signature: cWW-tSH-tHS-R-L-L-R-cWW History status: Exact match	12	4
129	IL_35350.1 View exemplar Basepair signature: cWW-L-R-cWW History status: New id, 2 parents	6	4
130	IL_65653.1 View exemplar Basepair signature: cWW-tSW-tHW-tWW-tWH-cSH-L-L-tHS-L-cWW-L History status: Exact match	16	4
131	IL_80604.3 View exemplar Basepair signature: cWW-cWW-tWH-tWH-tHW-L-R-cWW History status: Updated, 1 parent tWH-tWH-tHW-tHW (3)	14	4
132	IL_53985.1 View exemplar Basepair signature: cWW-tSH-tSH-L-R-cWW-cWW History status: New id, 1 parent	12	4
133	IL_08296.4 View exemplar Basepair signature: cWW-L-tHS-L-cWW History status: Exact match	8	4
134	IL_99772.1 View exemplar Basepair signature: cWW-L-R-L-R-cWW History status: New id, 1 parent Non canonical cWW and near pair (1)	8	4
135	IL_75461.4 View exemplar Basepair signature: cWW-L-R-L-cWW History status: Exact match 180 degree turn (4)	7	4
136	IL_06136.1 View exemplar Basepair signature: cWW-tSH-tSH-tHS-tHS-cWW History status: Exact match Quadruple sheared (4)	12	4
137	IL_59344.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-cWW History status: New id, 2 parents Tandem non-canonical cWW pairs with near WC pairs (1) Triple sheared with non-canonical cWW (1)	12	4
138	IL_68506.1 View exemplar Basepair signature: cWW-cWW-tSH-tHW-tHW-L-R-L-cWW-cWW History status: Exact match	17	4
139	IL_23419.1 View exemplar Basepair signature: cWW-cWW History status: New id, 2 parents Minor groove platform (1)	4	4
140	IL_33912.1 View exemplar Basepair signature: cWW-L-R-L-cWW-L History status: Exact match	8	4
141	IL_88269.3 View exemplar Basepair signature: cWW-L-R-cSH-tWH-tHS-cWW History status: Exact match 6x5 Sarcin-Ricin; G-bulge (3) tSH-tHW-tWW (1)	11	4
142	IL_93830.3 View exemplar Basepair signature: cWW-cWW-L-R-cSH-R-tWH-tHS-cWW History status: Exact match 7x7 Sarcin-Ricin with intercalated A; G-bulge (3)	14	4
143	IL_18471.2 View exemplar Basepair signature: cWW-cSH-cWW-cWW History status: Exact match Major groove platform with extra cWW (2)	7	4
144	IL_36940.1 View exemplar Basepair signature: cWW-L-R-tHS-cWW History status: New id, 1 parent Other IL (1) tSH-tHW (1)	8	4
145	IL_76308.5 View exemplar Basepair signature: cWW-tSH-tHW-tHS-cWW-cWW History status: Updated, 1 parent tSH-tHW-tHS-cWW (4)	12	4
146	IL_49460.2 View exemplar Basepair signature: cWW-L-R-L-R-L-cWW-L History status: Exact match	10	4
147	IL_36973.7 View exemplar Basepair signature: cWW-tSH-L-R-L-R-L-R-cWW-cWW History status: Updated, 1 parent	14	4
148	IL_47959.1 View exemplar Basepair signature: cWW-L-R-L-R-cWW History status: New id, 1 parent Tandem non-canonical cWW pairs (1)	8	4
149	IL_76319.2 View exemplar Basepair signature: cWW-L-cWS-cWW History status: Exact match Isolated cWS basepair (2)	7	4
150	IL_92446.1 View exemplar Basepair signature: cWW-L-R-L-cWW History status: New id, 1 parent	7	4
151	IL_97697.1 View exemplar Basepair signature: cWW-L-R-L-R-L-cWW-L-L History status: Exact match Reverse turn (4)	11	4
152	IL_74697.2 View exemplar Basepair signature: cWW-cWW-L-R-L-cWW History status: Exact match Decoding loop related (1)	9	4
153	IL_14935.1 View exemplar Basepair signature: cWW-cWW-L-R-cWW-cWW History status: New id, 1 parent	10	3
154	IL_86932.1 View exemplar Basepair signature: cWW-L-R-L-R-cWW-cWW History status: New id, 1 parent	10	3
155	IL_95395.1 View exemplar Basepair signature: cWW-L-R-L-R-L-cWW History status: New id, 1 parent	9	3
156	IL_74733.1 View exemplar Basepair signature: cWW-tSH-tHH-cSH-tWH-tHS-cWW-L History status: New id, 1 parent 8x6 Sarcin-Ricin with inserted Y; G-bulge (2)	14	3
157	IL_05192.1 View exemplar Basepair signature: cWW-L-R-L-R-L-cWW History status: Exact match	9	3
158	IL_69440.2 View exemplar Basepair signature: cWW-L-R-cSH-cWW History status: Exact match	8	3
159	IL_26728.2 View exemplar Basepair signature: cWW-cSH-R-cSH-cWW-cWW History status: Exact match	9	3
160	IL_58960.1 View exemplar Basepair signature: cWW-L-cWW-L-tWW-L-R-L History status: Exact match	11	3
161	IL_90318.2 View exemplar Basepair signature: cWW-tSH-L-R-L-R-cWW History status: Exact match UAA/GAN with extra pair (2)	10	3
162	IL_19724.2 View exemplar Basepair signature: cWW-L-cWW-L-cSH History status: Exact match	7	3
163	IL_39753.1 View exemplar Basepair signature: cWW-L-R-tWH-L-R-L-cWW-cWW History status: Exact match tWH-tWH-tHW-tHW (1)	13	3
164	IL_48444.1 View exemplar Basepair signature: cWW-L-R-cWW-cWW History status: New id, 1 parent	8	3
165	IL_87284.1 View exemplar Basepair signature: cWW-tSH-tHW-tWH-tHS-cWW History status: Exact match tSH-tHW-tWH-tHS (3)	12	3
166	IL_26785.1 View exemplar Basepair signature: cWW-tSH-tHH-cSH-tWH-tHS-R-L-cWW-L-cWW History status: Exact match 10x8 Sarcin-Ricin; G-bulge (3)	18	3
167	IL_03350.1 View exemplar Basepair signature: cWW-tWH-cWW-L-L-cWW-L-L-L History status: New id, no parents Reverse kink-turn related (3)	13	3
168	IL_46691.1 View exemplar Basepair signature: cWW-L-cWW-L-L-R-L-R History status: New id, 1 parent	10	3
169	IL_63797.2 View exemplar Basepair signature: cWW-cWS-cWW History status: Exact match Major groove outside cWW, minor groove, intercalation pocket (1) Minor groove platform (1)	5	3
170	IL_70627.2 View exemplar Basepair signature: cWW-tWH-L-R-cWW History status: Exact match	8	3
171	IL_35728.2 View exemplar Basepair signature: cWW-L-R-tSH-tHW-tHH-tHS-cWW-cWW History status: Exact match 9x8 Sarcin-Ricin; G-bulge (1) tSH-tHW-tHH-tHS (1)	16	3
172	IL_74051.1 View exemplar Basepair signature: cWW-tSS-tSH-L-tHS-cWW-L History status: Exact match Kink-turn (1)	11	3
173	IL_19897.2 View exemplar Basepair signature: cWW-L-cWW-L-L-tWH-R-L History status: Updated, 1 parent	11	3
174	IL_67877.1 View exemplar Basepair signature: cWW-cWH-cWW-cWW History status: New id, 1 parent	7	3
175	IL_75283.2 View exemplar Basepair signature: cWW-tSS-L-R-L-tHS-L-cWW-L-tWH-tWH-L-L-R History status: Exact match	18	3
176	IL_17806.1 View exemplar Basepair signature: cWW-L-cWW-cWW History status: Exact match	7	3
177	IL_65851.2 View exemplar Basepair signature: cWW-L-R-tSH-tHW-tHS-cWW-cWW History status: Exact match tSH-tHW-tHS with extra cWW pairs (1)	14	3
178	IL_68444.1 View exemplar Basepair signature: cWW-cWW History status: New id, 1 parent Stack outside cWW (1)	4	3
179	IL_09129.1 View exemplar Basepair signature: cWW-tWH-tWH-L-R-L-R-tWW-cWW History status: Exact match	14	3
180	IL_27393.7 View exemplar Basepair signature: cWW-L-cWW-L-L-R History status: Exact match	8	3
181	IL_30542.4 View exemplar Basepair signature: cWW-L-R-L-cWW-L History status: Updated, 1 parent	8	3
182	IL_96303.1 View exemplar Basepair signature: cWW-cSH-tSW-tHW-cWW-L-L-R-L-R History status: Exact match	13	3
183	IL_91414.1 View exemplar Basepair signature: cWW-L-R-L-cWW History status: New id, 1 parent Minor groove platform with extra cWW (2)	7	3
184	IL_47298.1 View exemplar Basepair signature: cWW-L-R-L-cWW History status: Exact match	7	3
185	IL_68574.3 View exemplar Basepair signature: cWW-tHH-tHS-cWW History status: Exact match	8	3
186	IL_78349.2 View exemplar Basepair signature: cWW-tSH-L-R-L-R-L-R-L-cWW-L History status: Updated, 1 parent	14	3
187	IL_10207.2 View exemplar Basepair signature: cWW-L-R-L-cSH-cSW-L-R-L-cWW-cWW History status: Exact match Minor groove platform related (3)	13	3
188	IL_82426.4 View exemplar Basepair signature: cWW-cHW-R-L-cHW-cHW-cHW-L-cWW-R History status: Exact match Part of G-quadruplex (3)	14	3
189	IL_20624.1 View exemplar Basepair signature: cWW-L-cWW History status: New id, 1 parent Major groove platform (1) Major groove platform; stack outside cWW (1)	5	3
190	IL_34470.2 View exemplar Basepair signature: cWW-cWW-L-R-tSH-tHH-cSH-tWH-tHS-cWW History status: Exact match 9x8 Sarcin-Ricin with GA cWW pair; G-bulge (2) 9x9 Sarcin-Ricin with pseudoknotted region; G-bulge (1)	17	3
191	IL_64858.1 View exemplar Basepair signature: cWW-cHW-cWH-R-L-cWH-cHW-cHW-cWH-cWH-cHW-L-cWW-L-R-cWW-L-cWW History status: New id, no parents G-quadruplex (3)	22	3
192	IL_18472.2 View exemplar Basepair signature: cWW-L-R-L-cWW-L History status: Exact match Symmetric double minor groove platform (1)	8	3
193	IL_28026.2 View exemplar Basepair signature: cWW-tSH-tWH-cWH-tSS-tHW-tHH-cWW History status: Updated, 1 parent	14	3
194	IL_14177.1 View exemplar Basepair signature: cWW-L-R-cWW History status: Exact match	6	3
195	IL_34739.3 View exemplar Basepair signature: cWW-tWW-tWW-L-R-L-R-L-cWW-L-L-R-L-R-L-R-L-R History status: Exact match	20	3
196	IL_64879.2 View exemplar Basepair signature: cWW-L-R-tSH-L-R-L-cWW History status: Exact match Triple sheared related (2) Other IL (1)	11	3
197	IL_60192.2 View exemplar Basepair signature: cWW-tSH-tSH-tSS-tHS-L-R-cWW History status: Exact match Kink-turn from 23S H58 (1) Kink-turn (1)	12	3
198	IL_64900.1 View exemplar Basepair signature: cWW-cWW-tSS-tSH-L-tHS-R-cWW-L History status: Exact match Kink-turn (3)	14	3
199	IL_02349.4 View exemplar Basepair signature: cWW-tSH-tWH-cSH-tWH-tHS-cWW History status: Exact match 8x6 Sarcin-Ricin with bulged A; G-bulge (2)	13	3
200	IL_67474.5 View exemplar Basepair signature: cWW-L-cWW-L History status: Exact match 180 degree turn (3)	6	3
201	IL_22248.1 View exemplar Basepair signature: cWW-cWW-cSH-cWW-L History status: Exact match Other IL (1)	8	2
202	IL_69313.1 View exemplar Basepair signature: cWW-tWH-tHH-tHS-cWW History status: Exact match	10	2
203	IL_07703.1 View exemplar Basepair signature: cWW-tSH-cSH-tWH-cSH-cHW-cWH-cWW-cWW History status: Exact match	15	2
204	IL_26564.1 View exemplar Basepair signature: cWW-L-R-tWH-L-R-L-R-L-cWW History status: New id, 1 parent	13	2
205	IL_34822.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-cWW History status: Exact match	12	2
206	IL_44998.1 View exemplar Basepair signature: cWW-cWW-R-cWW-tSS-R-cWW-cWW-L-cWW-L-L-L-cWW-L-cSS-L-R-L-R History status: Exact match	25	2
207	IL_28976.1 View exemplar Basepair signature: cWW-L-cWW-cSH-R-cWW History status: New id, no parents	10	2
208	IL_37722.1 View exemplar Basepair signature: cWW-L-tSH-L-tHW-tHS-R-cWW-L History status: Exact match Kink-turn (1)	14	2
209	IL_46559.1 View exemplar Basepair signature: cWW-L-tHH-L-R-L-cWW-L-R History status: Exact match	12	2
210	IL_53762.1 View exemplar Basepair signature: cWW-tSH-tHH-L-R-L-R-L-R-L-R-L-R-L-R-L-cWW-L-cWW-L History status: Exact match	24	2
211	IL_83690.1 View exemplar Basepair signature: cWW-L-cWW History status: New id, 1 parent Major groove platform (1)	5	2
212	IL_48431.1 View exemplar Basepair signature: cWW-L-R-L-R-L-cWW History status: Exact match	9	2
213	IL_87034.1 View exemplar Basepair signature: cWW-L-cWW History status: Exact match	7	2
214	IL_07880.1 View exemplar Basepair signature: cWW-cSS-L-tWH-tHW-cWW-cWW History status: New id, 1 parent Kink-turn related (1)	11	2
215	IL_02999.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-cWW-cWW History status: New id, no parents	14	2
216	IL_74794.1 View exemplar Basepair signature: cWW-L-cWW-L-L History status: Exact match	7	2
217	IL_05435.1 View exemplar Basepair signature: cWW-cWW-cWW History status: New id, 1 parent	6	2
218	IL_84251.1 View exemplar Basepair signature: cWW-L-tHS-cWW History status: Exact match	7	2
219	IL_15174.1 View exemplar Basepair signature: cWW-L-R-L-R-L-cWW-cSS-cWW-L History status: Exact match	13	2
220	IL_42032.1 View exemplar Basepair signature: cWW-cSH-cWW-tWH-L-cWW-L-L History status: Exact match	11	2
221	IL_48554.1 View exemplar Basepair signature: cWW-L-R-L-R-cWW History status: New id, 1 parent	8	2
222	IL_77576.1 View exemplar Basepair signature: cWW-tSH-tHW-L-cWW-L-L-R History status: New id, no parents	10	2
223	IL_27086.1 View exemplar Basepair signature: cWW-tWW-L-tWW-cWW-L History status: Exact match	10	2
224	IL_80884.1 View exemplar Basepair signature: cWW-L-cWW-L-cWW-L-L History status: Exact match	10	2
225	IL_38319.1 View exemplar Basepair signature: cWW-cWW-L-R-cSH-cWW History status: New id, 1 parent	9	2
226	IL_93699.1 View exemplar Basepair signature: cWW-L-R-L-R-L-tHS-L-cWW-L History status: Exact match Kink-turn (1)	13	2
227	IL_15218.1 View exemplar Basepair signature: cWW-L-cWW-L-L-R-L-R-L-R-L History status: Exact match	13	2
228	IL_45735.1 View exemplar Basepair signature: cWW-tSH-L-R-L-tHH-cWW History status: New id, 1 parent tHS double platform (1)	11	2
229	IL_51799.1 View exemplar Basepair signature: cWW-L-cWW History status: New id, 2 parents Single bulged A (1)	5	2
230	IL_59302.1 View exemplar Basepair signature: cWW-L-R-L-cWW-L History status: Exact match	8	2
231	IL_74114.1 View exemplar Basepair signature: cWW-cWS-cWW-L-R History status: Exact match	8	2
232	IL_38394.1 View exemplar Basepair signature: cWW-tWH-cWW-L-L-R-L History status: Exact match Stack outside cWW (1)	10	2
233	IL_93760.1 View exemplar Basepair signature: cWW-tSH-L-R-L-cWW-L History status: New id, 2 parents	10	2
234	IL_33886.1 View exemplar Basepair signature: cWW-L-cWW-L-R-L-R-cWW History status: New id, no parents Kink-turn with embedded cWW pair (2)	11	2
235	IL_96141.3 View exemplar Basepair signature: cWW-L-R-tSH-L-R-cWW History status: Updated, 1 parent Triple sheared (2)	10	2
236	IL_74125.1 View exemplar Basepair signature: cWW-L-cWW-L History status: Exact match	6	2
237	IL_81522.1 View exemplar Basepair signature: cWW-cWS-L-cWW History status: Exact match Major groove minor groove platform with intercalation; mini C-loop (2)	6	2
238	IL_04332.1 View exemplar Basepair signature: cWW-L-R-L-cWW-L-L-R-L-R-L History status: New id, 1 parent	13	2
239	IL_38420.1 View exemplar Basepair signature: cWW-L-cWW History status: New id, 1 parent Other IL (1)	5	2
240	IL_62034.1 View exemplar Basepair signature: cWW-L-R-L-cWW History status: New id, 1 parent	7	2
241	IL_57343.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-cWW History status: Exact match	11	2
242	IL_64509.1 View exemplar Basepair signature: cWW-tWW-tWW-tSS-L-cWW History status: Exact match Kink-turn related (1)	11	2
243	IL_77870.1 View exemplar Basepair signature: cWW-L-R-L-tHS-L-cWW-L-cWW History status: Exact match	12	2
244	IL_18382.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-L-R-L-R-cWW History status: New id, no parents	16	2
245	IL_38634.5 View exemplar Basepair signature: cWW-cWH-L-R-cWW History status: Exact match cWH basepair and non-canonical AC (2)	8	2
246	IL_54702.1 View exemplar Basepair signature: cWW-L-R-L-R-L-cWW-L History status: New id, 1 parent	10	2
247	IL_62067.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-cWW History status: New id, 2 parents Other IL (2)	11	2
248	IL_33943.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-cWW History status: New id, no parents	12	2
249	IL_49366.1 View exemplar Basepair signature: cWW-L-cWW History status: New id, 1 parent Multiple bulged bases (1)	5	2
250	IL_53064.1 View exemplar Basepair signature: cWW-cWW-L-R-L-R-L-R-L-R-L-cWW-L History status: New id, 1 parent	16	2
251	IL_74284.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-cWW History status: Exact match	10	2
252	IL_91592.1 View exemplar Basepair signature: cWW-L-tHH-L-cWW-L-L History status: Exact match	10	2
253	IL_14135.1 View exemplar Basepair signature: cWW-tSH-tHH-cSH-tWH-tHS-cWW-L History status: New id, 1 parent 8x6 Sarcin-Ricin with inserted Y; G-bulge (1)	14	2
254	IL_06691.1 View exemplar Basepair signature: cWW-cWS-L-R-L-R-cWW-L History status: New id, 2 parents	10	2
255	IL_58032.1 View exemplar Basepair signature: cWW-tWH-cWW-L-L-R History status: Exact match Major groove platform; stack outside cWW (1)	8	2
256	IL_88613.1 View exemplar Basepair signature: cWW-L-R-tSW-tHH-cSH-tWH-tHS-cWW History status: Exact match	15	2
257	IL_10447.1 View exemplar Basepair signature: cWW-tWW-L-R-L-R-L-R-L-tHW-R-L-cWW History status: Exact match	17	2
258	IL_10484.1 View exemplar Basepair signature: cWW-tSH-tHS-cWW History status: Exact match Double sheared (2)	8	2
259	IL_46284.1 View exemplar Basepair signature: cWW-L-R-L-cWW-L-L History status: New id, 1 parent C-loop with extra cWW pair (1)	9	2
260	IL_53581.1 View exemplar Basepair signature: cWW-tWW-L-tWH-cSS-tSS-tWH-cSS-tWH-R-tSS-R-L-L-cWW-L-cWW History status: Exact match Kink-turn related (2)	22	2
261	IL_74684.1 View exemplar Basepair signature: cWW-L-cWW-L History status: Exact match	6	2
262	IL_22046.1 View exemplar Basepair signature: cWW-L-cWW-L-cWW-L History status: Exact match Other IL (1)	9	2
263	IL_62898.1 View exemplar Basepair signature: cWW-L-R-L-cWW History status: New id, 1 parent	7	2
264	IL_76458.1 View exemplar Basepair signature: cWW-cSH-L-cWW History status: Exact match Minor groove platform (1)	6	2
265	IL_95004.1 View exemplar Basepair signature: cWW-cWH-R-L-cWW-L-L History status: Exact match	9	2
266	IL_25495.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-cWW History status: New id, 1 parent	10	2
267	IL_44624.1 View exemplar Basepair signature: cWW-tWH-cWW-L-cWW-tSS-cSS-cWW-L History status: New id, no parents	14	2
268	IL_11347.1 View exemplar Basepair signature: cWW-L-R-L-cWW-L History status: Exact match	8	2
269	IL_53749.1 View exemplar Basepair signature: cWW-L-cWW-L-L-R-L-R-L History status: Exact match	10	2
270	IL_38969.1 View exemplar Basepair signature: cWW-L-R-L-cWW-L-L History status: Exact match Reverse kink-turn related (1)	9	1
271	IL_62984.1 View exemplar Basepair signature: cWW-tHS-tWH-cWH-cWW-L-L-cWW History status: New id, no parents	13	1
272	IL_76460.1 View exemplar Basepair signature: cWW-cWW-L-tHS-L-R-L-cWW-L-L-R-L-L-R-L-R-L-R History status: New id, no parents	22	1
273	IL_58809.1 View exemplar Basepair signature: cWW-tSS-L-R-L-R-L-R-L-cWW-L-L-R-L-R-L-L-R History status: Exact match Kink-turn related (1)	19	1
274	IL_73700.1 View exemplar Basepair signature: cWW-L-R-L-cWW-L-cWW-tHS-cWW History status: New id, no parents	13	1
275	IL_80287.1 View exemplar Basepair signature: cWW-tSH-tHH-L-tHS-cWW History status: New id, 1 parent	11	1
276	IL_99095.1 View exemplar Basepair signature: cWW-tSS-L-tSH-L-R-R-R-L-cWW-L-cWW History status: New id, no parents	16	1
277	IL_19516.1 View exemplar Basepair signature: cWW-L-R-L-R-L-cWW-L-cWW-L-L-L-R-L-R History status: Exact match Pseudoknot (1)	18	1
278	IL_93094.1 View exemplar Basepair signature: cWW-L-tHH-L-tHS-L-cWW History status: Exact match Reverse kink-turn (1)	11	1
279	IL_22252.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-L-R-L-cWW-L History status: Exact match Kink-turn related (1)	16	1
280	IL_39287.1 View exemplar Basepair signature: cWW-L-R-L-tSH-tSS-L-tHS-cWW-L-L History status: Exact match Kink-turn related (1)	15	1
281	IL_55917.1 View exemplar Basepair signature: cWW-L-cWW-L-L-R History status: New id, no parents	8	1
282	IL_51191.1 View exemplar Basepair signature: cWW-L-R-L-cWW-L-L History status: Exact match	9	1
283	IL_73759.1 View exemplar Basepair signature: cWW-cSH-tHS-cWH-cHW-cWW History status: Exact match Part of G-quadruplex (1)	9	1
284	IL_80412.1 View exemplar Basepair signature: cWW-tSW-L-cWW-L-L-R-L History status: Exact match	11	1
285	IL_99396.1 View exemplar Basepair signature: cWW-R-L-R-L-cHW-L-R-L-R-L-R-L-R-tWW-R-L-R-L-R-L-L-cWW-R-R-L-R-R-L-R-L-R-L-R History status: New id, no parents	38	1
286	IL_53787.1 View exemplar Basepair signature: cWW-L-cWW-L-L-R-L-R-L-R-L-R History status: Exact match Pseudoknot (1)	14	1
287	IL_61242.1 View exemplar Basepair signature: cWW-cWW-L-R-L-R-cWW History status: Exact match	10	1
288	IL_67780.1 View exemplar Basepair signature: cWW-cSH-L-R-L-L-R-L History status: New id, no parents	10	1
289	IL_84205.1 View exemplar Basepair signature: cWW-L-cWW History status: Exact match 180 degree turn (1)	5	1
290	IL_15107.1 View exemplar Basepair signature: cWW-R-L-R-L-R-L-R-L-R-L-R-L-L-L-cWW History status: New id, no parents	18	1
291	IL_70096.1 View exemplar Basepair signature: cWW-L-cWW-cWW History status: Exact match Kink-turn related (1)	7	1
292	IL_77045.1 View exemplar Basepair signature: cWW-L-tSW-L-tHW-cWW-L History status: New id, no parents Kink-turn (1)	11	1
293	IL_45488.1 View exemplar Basepair signature: cWW-cWW-L-R-tWH-L-R-cWW History status: Exact match	12	1
294	IL_59027.1 View exemplar Basepair signature: cWW-L-R-L-cWW-L-L History status: Exact match Kink-turn related (1)	9	1
295	IL_90346.1 View exemplar Basepair signature: cWW-L-R-L-cWW-L-L History status: Exact match	9	1
296	IL_19852.1 View exemplar Basepair signature: cWW-tWH-cWW-cWH-cWH-cWH History status: Exact match Part of G-quadruplex (1)	11	1
297	IL_29357.1 View exemplar Basepair signature: cWW-L-R-L-R-cWH-tHW-cSH-cWW-L-L-cWW-R-R History status: New id, no parents	18	1
298	IL_61249.1 View exemplar Basepair signature: cWW-L-R-L-R-tHS-cWW-cWW-tSH-tHS-cWW-cWW History status: New id, no parents	20	1
299	IL_93585.1 View exemplar Basepair signature: cWW-L-cWW-L-cWW-tWH-L-cSH-L History status: Exact match Kink-turn related (1)	11	1
300	IL_22821.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-L-cWW-L-L-R-L History status: Exact match Pseudoknot (1)	17	1
301	IL_33557.1 View exemplar Basepair signature: cWW-tHH-R-L-R-L-L-R-L-R-cWW History status: Exact match Kink-turn related (1)	14	1
302	IL_87290.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-L-R-L-R-L-R-L History status: Exact match Kink-turn related (1)	15	1
303	IL_95811.1 View exemplar Basepair signature: cWW-L-cWW-L-cWW-L-R-L History status: Exact match Vitamin B12 Aptamer (1)	11	1
304	IL_17765.1 View exemplar Basepair signature: cWW-tWH-cHW-L-tSS-cSS-cWW-R-L History status: Exact match	14	1
305	IL_51287.1 View exemplar Basepair signature: cWW-tSS-L-R-L-R-L-R-L-cWW-L-R-L-R-tHH-R-L-R-L-R-R-L-R-L-R-R-L-L-R-L-cWW History status: New id, no parents	35	1
306	IL_90348.1 View exemplar Basepair signature: cWW-cSW-L-cWW-L History status: Exact match	7	1
307	IL_12750.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-L-R-L-cWW History status: Exact match	15	1
308	IL_29826.1 View exemplar Basepair signature: cWW-tSH-tHH-L-R-L-R-cSH-R-R-L-R-L-R-L-R-L-R-L-cWW History status: New id, no parents	25	1
309	IL_84409.1 View exemplar Basepair signature: cWW-tSS-L-cWH-L-cSH-cHW-tWH-cSS-tWH-tSW-cWS-R-L-R-cSH-R-cWW-L History status: Exact match	23	1
310	IL_06083.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-L History status: New id, no parents	11	1
311	IL_33835.1 View exemplar Basepair signature: cWW-L-R-L-R-L-cWW History status: New id, no parents	9	1
312	IL_48600.1 View exemplar Basepair signature: cWW-L-cWW-cWW-R-L-tHS-cWW History status: New id, no parents	13	1
313	IL_70801.1 View exemplar Basepair signature: cWW-cWW-L-R-tWW-L-R-L-cWW History status: Exact match	13	1
314	IL_87495.1 View exemplar Basepair signature: cWW-R-L-R-L-L-L History status: New id, no parents	8	1
315	IL_95961.1 View exemplar Basepair signature: cWW-tSH-L-cWW-L History status: Exact match	8	1
316	IL_00087.1 View exemplar Basepair signature: cWW-L-R-tSH-L-cWS-R-L-R-L-R-cWW History status: New id, no parents	16	1
317	IL_81392.1 View exemplar Basepair signature: cWW-L-R-L-R-L-cWW-L-L-R-L History status: New id, no parents	13	1
318	IL_04105.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-L-cWW-L-L-R History status: Exact match	16	1
319	IL_13244.1 View exemplar Basepair signature: cWW-tSH-L-cWW-L-L-R-L-R-L-R-L-R-L-R-L-R-L-R-L-R-L-R-L-R-L-R-L-R History status: New id, no parents	32	1
320	IL_30441.1 View exemplar Basepair signature: cWW-cSH-tSW-tHW-cWW-L-L-R-L-L-R History status: Exact match	14	1
321	IL_47108.1 View exemplar Basepair signature: cWW-L-R-L-tHH-L-cWW History status: Exact match	9	1
322	IL_84665.1 View exemplar Basepair signature: cWW-L-cSW-cWW-L-L-R-L-R-L-R-L History status: Exact match	15	1
323	IL_23152.1 View exemplar Basepair signature: cWW-L-cWW-L-L-R-L-R-L History status: Exact match	11	1
324	IL_42778.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-cWW History status: New id, no parents	11	1
325	IL_48802.1 View exemplar Basepair signature: cWW-R-L-R-L-R-L-R-L-L-L-L-R History status: New id, no parents	14	1
326	IL_77827.1 View exemplar Basepair signature: cWW-tSS-R-L-L-R-L-cWW-tHH-L-R-L-R-L-R-L-R-L-R-L-cSH-R-R-L-R-L-R-cWW-R-cWW-R-L-R-L-R-L-R-R History status: Exact match	45	1
327	IL_88072.1 View exemplar Basepair signature: cWW-L-R-L-cWW-L-L-R-L-R-L History status: New id, 1 parent	13	1
328	IL_18200.1 View exemplar Basepair signature: cWW-L-R-tHW-tHW-L-R-L-R-cWW-cWW History status: New id, 1 parent	16	1
329	IL_36471.1 View exemplar Basepair signature: cWW-R-L-R-L-L-L History status: New id, 1 parent	8	1
330	IL_45896.1 View exemplar Basepair signature: cWW-cWW-cWW History status: New id, no parents	11	1
331	IL_13394.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-L-R-L-R-L-R-L-R-L-R-L-R History status: Exact match	21	1
332	IL_20245.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-L-R-L-R-L-cWW-L-L-R-L History status: Exact match	18	1
333	IL_85222.1 View exemplar Basepair signature: cWW-L-R-L-R-L-cWW-L-L History status: Exact match	11	1
334	IL_06300.1 View exemplar Basepair signature: cWW-L-R-L-R-L-cWW History status: Exact match	9	1
335	IL_15484.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-L-cWW-cSH History status: Exact match	14	1
336	IL_43140.1 View exemplar Basepair signature: cWW-L-cWW-cWH-L-L History status: Exact match	9	1
337	IL_49010.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-L-R-L-R-tWH-L-R-cWW History status: New id, no parents	20	1
338	IL_00559.1 View exemplar Basepair signature: cWW-cWW-L-cWW-L-L-R-L-R-L-R-L-R-L-R-L History status: Exact match	18	1
339	IL_52743.1 View exemplar Basepair signature: cWW-tSW-L-cSW-L-cWW-L History status: Exact match	10	1
340	IL_74184.1 View exemplar Basepair signature: cWW-L-tHS-L-cWW-L-L-L History status: Exact match	11	1
341	IL_81731.1 View exemplar Basepair signature: cWW-cWW-L-R-L-R-L-cWW-L-tWW-L-R-L History status: New id, no parents	17	1
342	IL_13874.1 View exemplar Basepair signature: cWW-cWH-tHS-cWW-cSH-cWH-cHW-cWW History status: New id, no parents	12	1
343	IL_20463.1 View exemplar Basepair signature: cWW-tSH-tHW-cSH-tHH-cWH-L-R-cWW-L-L-R History status: Exact match 7x11 Sarcin-Ricin with pseudoknotted region; G-bulge (1)	18	1
344	IL_85630.1 View exemplar Basepair signature: cWW-tSH-L-R-L-R-L-cWW-L-cWW-L History status: Exact match	15	1
345	IL_06463.1 View exemplar Basepair signature: cWW-L-tHS-tSW-tWH-cWH-cWW-L-cWW History status: New id, no parents	15	1
346	IL_16073.1 View exemplar Basepair signature: cWW-L-cWW-L-cWW-L-L-L-R History status: Exact match	12	1
347	IL_24499.1 View exemplar Basepair signature: cWW-cWS-L-R-L-R-cWW-L-cSH-L History status: Exact match	12	1
348	IL_44325.1 View exemplar Basepair signature: cWW-cWH-cWW-L History status: Exact match	6	1
349	IL_57881.1 View exemplar Basepair signature: cWW-L-cWW History status: New id, 1 parent Multiple bulged bases (1)	5	1
350	IL_64842.1 View exemplar Basepair signature: cWW-L-tWH-L-cWW-L-cSH History status: Exact match	10	1
351	IL_96371.1 View exemplar Basepair signature: cWW-tHH-cWW History status: Exact match	6	1
352	IL_01393.1 View exemplar Basepair signature: cWW-L-cWW-L-L History status: Exact match	6	1
353	IL_46020.1 View exemplar Basepair signature: cWW-cHW-cHW-cWW History status: New id, no parents	7	1
354	IL_31504.1 View exemplar Basepair signature: cWW-cWW-cWS-tSH-L-tWH-cWW-tSS-tSH-L-R-L History status: Exact match	18	1
355	IL_54737.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-L-R-L-R-L-R-L-R-L-R History status: New id, no parents	20	1
356	IL_85652.1 View exemplar Basepair signature: cWW-tSH-L-R-L-R-L-cWW-L History status: Exact match	12	1
357	IL_93889.1 View exemplar Basepair signature: cWW-R-tSH-L-cSH-L-L-R-L-R-L-R-L-R-L-R-L-L History status: New id, no parents	21	1
358	IL_44519.1 View exemplar Basepair signature: cWW-R-L-L-L-L-R-L-R-L-R-L-R-L-R-L-R-L-R-L-R-L-R History status: New id, no parents	24	1
359	IL_79147.1 View exemplar Basepair signature: cWW-L-R-L-R-tWH-L-R-L-cWW-L History status: New id, 1 parent	14	1
360	IL_97218.1 View exemplar Basepair signature: cWW-L-R-L-cSH-L-L-R-L-R-L-R-L-R-L-cWW-L-L History status: New id, no parents	21	1
361	IL_02203.1 View exemplar Basepair signature: cWW-cSW-cWW-cWW History status: New id, 1 parent	8	1
362	IL_46112.1 View exemplar Basepair signature: cWW-L-cWW-L-L-R-L History status: Exact match	9	1
363	IL_59724.1 View exemplar Basepair signature: cWW-L-R-L-R-cSH-tWH-tHS-R-L-cWW History status: Exact match 8x7 Sarcin-Ricin with CC bifurcated pair; G-bulge (1)	15	1
364	IL_83023.1 View exemplar Basepair signature: cWW-R-L-R-L-R-L-L-L-L History status: New id, 1 parent	11	1
365	IL_91920.1 View exemplar Basepair signature: cWW-cWW-tHH-cWW History status: Exact match	8	1
366	IL_32357.1 View exemplar Basepair signature: cWW-L-cWW-cWW History status: New id, 1 parent	7	1
367	IL_38882.1 View exemplar Basepair signature: cWW-L-R-tSS-R-L-tSH-R-L-cWW-R-L-R-L-cWW History status: Exact match	18	1
368	IL_54896.1 View exemplar Basepair signature: cWW-L-R-L-cWW-L-L-R-L-R History status: Exact match	12	1
369	IL_62654.1 View exemplar Basepair signature: cWW-tSH-tHH-tHS-cWW History status: Exact match tSH-tHH-tHS (1)	10	1
370	IL_94351.1 View exemplar Basepair signature: cWW-L-R-L-R-L-tHS-cWW History status: Exact match	11	1
371	IL_79846.1 View exemplar Basepair signature: cWW-R-L-L-tWH-cWW-L-L-L-R-L-R-cSH-L-L History status: New id, no parents	19	1
372	IL_19048.1 View exemplar Basepair signature: cWW-L-R-L-R-L-cSH-L-R-cWW-cWW History status: Exact match	14	1
373	IL_28030.1 View exemplar Basepair signature: cWW-cSW-cWW-cWW History status: New id, no parents	6	1
374	IL_04736.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-cWW History status: Exact match	12	1
375	IL_14882.1 View exemplar Basepair signature: cWW-tSH-L-cWW-L-L-R-L History status: New id, 1 parent	11	1
376	IL_47972.1 View exemplar Basepair signature: cWW-L-R-L-cWW-L History status: Exact match	8	1
377	IL_07612.1 View exemplar Basepair signature: cWW-cWS-tHS-cWH-R-L-cWW-L History status: New id, 1 parent	9	1
378	IL_16665.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-cWW History status: Exact match	11	1
379	IL_34780.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-cWW-cWW-cWW History status: Exact match Kink-turn (1)	16	1
380	IL_73662.1 View exemplar Basepair signature: cWW-L-cWW-L-L-R-L-R-L-R History status: Exact match	12	1
381	IL_88948.1 View exemplar Basepair signature: cWW-tSH-tWW-tHS-cWW History status: New id, 1 parent	10	1
382	IL_28564.1 View exemplar Basepair signature: cWW-L-R-L-cWW History status: Exact match	7	1
383	IL_46461.1 View exemplar Basepair signature: cWW-L-tHH-L-tHS-L-cWW-L-L-L-L-R-L-R-tSW-R-R-L-R-L-R-L-R History status: Exact match	28	1
384	IL_60448.1 View exemplar Basepair signature: cWW-L-cWW-L-R-L-tWH-L-tHS-L-R-L-cWW-L-R History status: New id, no parents	20	1

Coloring options:
Nucleotide numbers

New id, no parents 45; Updated, 1 parent 39; Exact match 187; New id, 1 parent 68; Updated, 2 parents 9; New id, 2 parents 30; New id, > 2 parents 6;

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