Valid loops

#loop idlocationmotif
11/CA/24:27,1/CA/599:601NA
21/CA/37:41,1/CA/466:471NA
31/CA/50:52,1/CA/428:429NA
41/CA/58:62,1/CA/88:89NA
51/CA/63:69,1/CA/82:87NA
61/CA/109:113,1/CA/301:305NA
71/CA/113:116,1/CA/300:301NA
81/CA/149:152,1/CA/162:165NA
91/CA/177:180,1/CA/194:197NA
101/CA/270:272,1/CA/284:285NA
111/CA/311:317,1/CA/347:355NA
121/CA/363:366,1/CA/375:381NA
131/CA/389:391,1/CA/406:408NA
141/CA/411:413,1/CA/420:422NA
151/CA/439:441,1/CA/463:464NA
161/CA/443:447,1/CA/460:461NA
171/CA/447:448,1/CA/458:460NA
181/CA/481:482,1/CA/505:507NA
191/CA/562:568,1/CA/575:583NA
201/CA/616:622,1/CA/1104:1105NA
211/CA/624:626,1/CA/973:975NA
221/CA/627:631,1/CA/968:972NA
231/CA/660:663,1/CA/669:672NA
241/CA/868:869,1/CA/958:960NA
251/CA/871:874,1/CA/953:956NA
261/CA/874:878,1/CA/950:953NA
271/CA/885:888,1/CA/924:927NA
281/CA/892:899,1/CA/910:920NA
291/CA/985:990,1/CA/1014:1016NA
301/CA/990:994,1/CA/1010:1014NA
311/CA/1041:1045,1/CA/1073:1077NA
321/CA/1051:1053,1/CA/1066:1067NA
331/CA/1053:1057,1/CA/1062:1066NA
341/CA/1111:1118,1/CA/1129:1134NA
351/CA/1146:1151,1/CA/1627:1632NA
361/CA/1173:1175,1/CA/1464:1466NA
371/CA/1178:1179,1/CA/1459:1461NA
381/CA/1268:1270,1/CA/1440:1441NA
391/CA/1271:1275,1/CA/1437:1439NA
401/CA/1280:1281,1/CA/1426:1428NA
411/CA/1290:1293,1/CA/1322:1325NA
421/CA/1333:1334,1/CA/1417:1419NA
431/CA/1335:1337,1/CA/1415:1416NA
441/CA/1340:1342,1/CA/1383:1384NA
451/CA/1345:1348,1/CA/1377:1380NA
461/CA/1351:1355,1/CA/1368:1374NA
471/CA/1540:1545,1/CA/1566:1571NA
481/CA/1636:1641,1/CA/1760:1767NA
491/CA/1642:1644,1/CA/1757:1759NA
501/CA/1644:1647,1/CA/1753:1757NA
511/CA/1649:1652,1/CA/1748:1751NA
521/CA/1653:1656,1/CA/1744:1747NA
531/CA/1656:1658,1/CA/1743:1744NA
541/CA/1664:1667,1/CA/1734:1737NA
551/CA/1669:1672,1/CA/1729:1732NA
561/CA/1672:1674,1/CA/1727:1729NA
571/CA/1675:1678,1/CA/1723:1726NA
581/CA/1678:1682,1/CA/1719:1723NA
591/CA/1688:1690,1/CA/1711:1713NA
601/CA/1693:1695,1/CA/1706:1708NA
611/DA/7:8,1/DB/150:152NA
621/DA/13:15,1/DB/144:145NA
631/DA/27:28,1/DA/56:58NA
641/DA/32:38,1/DA/45:52NA
651/DA/82:89,1/DA/97:103NA
661/DA/125:127,1/DA/141:143NA
671/DA/159:160,1/DA/260:262NA
681/DA/161:164,1/DA/257:259NA
691/DA/169:170,1/DA/248:253NA
701/DA/176:179,1/DA/237:242NA
711/DA/185:186,1/DA/229:231NA
721/DA/189:191,1/DA/204:205NA
731/DA/328:332,1/DB/31:33NA
741/DA/336:339,1/DB/25:27NA
751/DA/376:379,1/DA/390:403NA
761/DA/404:410,1/DB/13:19NA
771/DA/429:431,1/DA/628:630NA
781/DA/460:462,1/DA/469:470NA
791/DA/511:512,1/DA/578:580NA
801/DA/517:525,1/DA/567:573NA
811/DA/531:534,1/DA/559:561NA
821/DA/537:538,1/DA/553:556NA
831/DA/594:597,1/DA/606:608NA
841/DA/668:670,1/DA/792:794NA
851/DA/679:683,1/DA/697:701NA
861/DA/725:726,1/DA/743:745NA
871/DA/726:728,1/DA/741:743NA
881/DA/755:757,1/DA/774:777NA
891/DA/758:763,1/DA/768:773NA
901/DA/803:805,1/DA/938:940NA
911/DA/805:809,1/DA/931:938NA
921/DA/833:834,1/DA/859:861NA
931/DA/834:839,1/DA/854:859NA
941/DA/869:872,1/DA/888:890NA
951/DA/873:875,1/DA/886:887NA
961/DA/907:909,1/DA/919:923NA
971/DA/954:956,1/DA/965:967NA
981/DA/969:970,1/DA/1111:1113NA
991/DA/982:984,1/DA/1100:1104NA
1001/DA/988:990,1/DA/1061:1063NA
1011/DA/991:998,1/DA/1052:1060NA
1021/DA/999:1001,1/DA/1050:1051NA
1031/DA/1001:1010,1/DA/1042:1050NA
1041/DA/1010:1013,1/DA/1039:1042NA
1051/DA/1013:1020,1/DA/1034:1039NA
1061/DA/1067:1071,1/DA/1089:1093NA
1071/DA/1072:1076,1/DA/1083:1088NA
1081/DA/1120:1122,1/DA/1136:1138NA
1091/DA/1167:1171,1/DA/1328:1332NA
1101/DA/1173:1180,1/DA/1325:1326NA
1111/DA/1180:1182,1/DA/1324:1325NA
1121/DA/1187:1206,1/DA/1298:1319NA
1131/DA/1207:1210,1/DA/1295:1297NA
1141/DA/1218:1226,1/DA/1283:1287NA
1151/DA/1234:1238,1/DA/1250:1254NA
1161/DA/1262:1266,1/DA/1275:1277NA
1171/DA/1376:1378,1/DA/1428:1431NA
1181/DA/1388:1394,1/DA/1415:1419NA
1191/DA/1394:1396,1/DA/1413:1415NA
1201/DA/1444:1451,1/DA/2353:2359NA
1211/DA/1492:1495,1/DA/1835:1836NA
1221/DA/1501:1505,1/DA/1513:1515NA
1231/DA/1532:1536,1/DA/1585:1590NA
1241/DA/1624:1630,1/DA/1811:1820NA
1251/DA/1645:1649,1/DA/1806:1810NA
1261/DA/1661:1663,1/DA/1786:1788NA
1271/DA/1665:1671,1/DA/1776:1784NA
1281/DA/1695:1698,1/DA/1748:1752NA
1291/DA/1698:1707,1/DA/1739:1748NA
1301/DA/1707:1711,1/DA/1735:1739NA
1311/DA/1711:1718,1/DA/1726:1735NA
1321/DA/1883:1889,1/DA/2346:2349NA
1331/DA/1895:1897,1/DA/2338:2340NA
1341/DA/1898:1901,1/DA/2336:2337NA
1351/DA/1901:1906,1/DA/2333:2336NA
1361/DA/1918:1923,1/DA/1928:1934NA
1371/DA/1940:1942,1/DA/2106:2108NA
1381/DA/1947:1948,1/DA/2098:2101NA
1391/DA/1965:1968,1/DA/2054:2057NA
1401/DA/1971:1976,1/DA/2046:2051NA
1411/DA/1981:1982,1/DA/2039:2041NA
1421/DA/1988:1991,1/DA/2030:2033NA
1431/DA/1994:1996,1/DA/2025:2027NA
1441/DA/2128:2130,1/DA/2322:2325NA
1451/DA/2156:2162,1/DA/2172:2180NA
1461/DA/2196:2199,1/DA/2245:2246NA
1471/DA/2200:2201,1/DA/2241:2244NA
1481/DA/2204:2206,1/DA/2237:2238NA
1491/DA/2206:2210,1/DA/2235:2237NA
1501/DA/2211:2217,1/DA/2228:2234NA
1511/DA/2276:2277,1/DA/2307:2310NA
1521/DA/2277:2288,1/DA/2304:2307NA
1531/DA/2391:2394,1/DA/2986:2988NA
1541/DA/2396:2398,1/DA/2981:2984NA
1551/DA/2409:2411,1/DA/2811:2812NA
1561/DA/2412:2413,1/DA/2807:2810NA
1571/DA/2423:2425,1/DA/2604:2607NA
1581/DA/2444:2445,1/DA/2501:2503NA
1591/DA/2451:2462,1/DA/2493:2495NA
1601/DA/2466:2469,1/DA/2476:2489NA
1611/DA/2666:2668,1/DA/2686:2690NA
1621/DA/2718:2721,1/DA/2735:2738NA
1631/DA/2823:2824,1/DA/2865:2867NA
1641/DA/2824:2826,1/DA/2863:2865NA
1651/DA/2826:2828,1/DA/2862:2863NA
1661/DA/2828:2831,1/DA/2857:2862NA
1671/DA/2835:2839,1/DA/2849:2853NA
1681/DA/2876:2877,1/DA/2949:2951NA
1691/DA/2879:2881,1/DA/2943:2947NA
1701/DA/2881:2882,1/DA/2940:2943NA
1711/DA/2889:2891,1/DA/2912:2914NA
1721/DA/2891:2892,1/DA/2909:2912NA
1731/DA/2918:2920,1/DA/2926:2928NA
1741/DA/2960:2961,1/DA/2970:2972NA
1751/DA/3003:3007,1/DA/3139:3145NA
1761/DA/3012:3014,1/DA/3040:3042NA
1771/DA/3019:3025,1/DA/3030:3035NA
1781/DA/3047:3051,1/DA/3091:3094NA
1791/DA/3054:3059,1/DA/3084:3088NA
1801/DA/3103:3107,1/DA/3127:3131NA
1811/DA/3164:3166,1/DA/3284:3286NA
1821/DA/3211:3214,1/DA/3219:3224NA
1831/DA/3233:3235,1/DA/3253:3254NA
1841/DA/3236:3238,1/DA/3249:3252NA
1851/DA/3300:3303,1/DA/3311:3314NA
1861/DA/3324:3325,1/DA/3381:3383NA
1871/DA/3332:3337,1/DA/3367:3371NA
1881/DA/3340:3345,1/DA/3360:3364NA
1891/DC/20:27,1/DC/52:58NA
1901/DC/28:31,1/DC/46:51NA
1911/DC/32:36,1/DC/41:45NA
1921/DC/70:78,1/DC/97:103NA

Problematic loops

#loop idProblemSequence
142, 44, 45, 46, 47, 48, 431, 432, 433
2142, 143, 145, 146, 147, 148, 149, 165, 166, 167, 168, 169, 170, 171, 172
3318, 319, 320, 323, 345, 346
4550, 551, 552, 553, 554, 555, 556, 558, 559, 586, 587, 588
51157, 1158, 1160, 1161, 1616, 1617, 1618, 1620, 1621
61276, 1277, 1278, 1279, 1429, 1430, 1431, 1432, 1433, 1434, 1436
728, 30, 54, 55, 56
8452, 453, 454, 476, 481, 482
9975, 976, 977, 982, 1104, 1105, 1106
101397, 1399, 1400, 1410, 1411, 1412
111400, 1401, 1403, 1408, 1409, 1410
122770, 2771, 2773, 2787, 2788
133062, 3063, 3065, 3076, 3077, 3078, 3079, 3080, 3081
143326, 3327, 3328, 3330, 3331, 3372, 3373, 3374, 3375, 3380
1544, 45, 58, 59, 60, 61, 62, 63, 64, 65, 66, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, 100

Valid loops

#loop idlocationmotif
11/CA/7:17NA
21/CA/154:160NA
31/CA/226:232NA
41/CA/275:281NA
51/CA/329:339NA
61/CA/368:373NA
71/CA/393:404NA
81/CA/414:419NA
91/CA/450:456NA
101/CA/491:496NA
111/CA/568:575NA
121/CA/663:669NA
131/CA/827:845NA
141/CA/899:910NA
151/CA/937:942NA
161/CA/997:1007NA
171/CA/1057:1062NA
181/CA/1084:1089NA
191/CA/1121:1126NA
201/CA/1233:1246NA
211/CA/1296:1301NA
221/CA/1309:1316NA
231/CA/1395:1403NA
241/CA/1501:1506NA
251/CA/1550:1561NA
261/CA/1592:1604NA
271/CA/1698:1703NA
281/CA/1778:1783NA
291/CB/13:22NA
301/CB/31:39NA
311/CB/52:60NA
321/DA/38:45NA
331/DA/69:74NA
341/DA/90:96NA
351/DA/132:136NA
361/DA/194:201NA
371/DA/216:224NA
381/DA/278:287NA
391/DA/303:312NA
401/DA/357:362NA
411/DA/382:387NA
421/DA/463:468NA
431/DA/543:548NA
441/DA/599:604NA
451/DA/640:649NA
461/DA/687:693NA
471/DA/707:712NA
481/DA/732:737NA
491/DA/763:768NA
501/DA/844:849NA
511/DA/876:885NA
521/DA/910:918NA
531/DA/957:964NA
541/DA/1076:1083NA
551/DA/1126:1132NA
561/DA/1148:1155NA
571/DA/1239:1249NA
581/DA/1267:1274NA
591/DA/1403:1408NA
601/DA/1462:1470NA
611/DA/1506:1512NA
621/DA/1544:1549NA
631/DA/1565:1574NA
641/DA/1599:1608NA
651/DA/1679:1689NA
661/DA/1719:1725NA
671/DA/1760:1765NA
681/DA/1792:1796NA
691/DA/1844:1851NA
701/DA/1862:1868NA
711/DA/1923:1928NA
721/DA/2008:2013NA
731/DA/2065:2071NA
741/DA/2110:2114NA
751/DA/2135:2145NA
761/DA/2220:2225NA
771/DA/2253:2263NA
781/DA/2292:2300NA
791/DA/2369:2378NA
801/DA/2470:2475NA
811/DA/2536:2543NA
821/DA/2568:2573NA
831/DA/2616:2624NA
841/DA/2633:2645NA
851/DA/2673:2681NA
861/DA/2693:2700NA
871/DA/2724:2732NA
881/DA/2744:2749NA
891/DA/2776:2784NA
901/DA/2840:2848NA
911/DA/2897:2904NA
921/DA/2920:2926NA
931/DA/2963:2968NA
941/DA/3025:3030NA
951/DA/3068:3073NA
961/DA/3110:3124NA
971/DA/3214:3219NA
981/DA/3240:3247NA
991/DA/3303:3311NA
1001/DA/3349:3356NA
1011/DB/47:56NA
1021/DB/109:113NA
1031/DB/123:130NA
1041/DC/36:41NA
1051/DC/85:90NA

Problematic loops

#loop idProblemSequence
1182, 183, 184, 185, 189, 190, 191, 192
21188, 1189, 1190, 1191, 1192, 1193, 1194, 1195, 1196, 1197
31358, 1359, 1364, 1365
41020, 1021, 1033, 1034
51346, 1347, 1357, 1358
61631, 1632, 1633, 1634, 1635, 1637, 1638, 1639, 1640
72164, 2165, 2166, 2167, 2169, 2170

Valid loops

#loop idlocationmotif
11/CA/41:42,1/CA/433:439,1/CA/464:466NA
21/CA/881:884,1/CA/928:937,1/CA/942:947NA
31/CA/1036:1040,1/CA/1078:1083,1/CA/1090:1095NA
41/CA/1161:1164,1/CA/1581:1587,1/CA/1609:1616NA
51/CA/1168:1171,1/CA/1468:1470,1/CA/1574:1577NA
61/CA/1180:1187,1/CA/1198:1209,1/CA/1454:1458NA
71/CA/1283:1289,1/CA/1326:1333,1/CA/1419:1424NA
81/CA/1293:1294,1/CA/1303:1308,1/CA/1317:1322NA
91/CA/1337:1338,1/CA/1386:1392,1/CA/1406:1415NA
101/CA/1470:1474,1/CA/1533:1540,1/CA/1571:1574NA
111/DA/186:189,1/DA/205:214,1/DA/226:229NA
121/DA/369:376,1/DA/403:404,1/DB/19:20NA
131/DA/814:820,1/DA/905:907,1/DA/923:926NA
141/DA/828:831,1/DA/863:867,1/DA/892:897NA
151/DA/1230:1232,1/DA/1256:1262,1/DA/1277:1279NA
161/DA/1479:1485,1/DA/1857:1860,1/DA/1870:1874NA
171/DA/1488:1491,1/DA/1837:1843,1/DA/1852:1854NA
181/DA/1526:1531,1/DA/1591:1595,1/DA/1612:1613NA
191/DA/2432:2435,1/DA/2512:2517,1/DA/2590:2597NA
201/DA/2529:2532,1/DA/2547:2563,1/DA/2578:2581NA
211/DA/2651:2653,1/DA/2754:2765,1/DA/2793:2798NA
221/DA/2664:2666,1/DA/2690:2692,1/DA/2701:2706NA
231/DA/2886:2889,1/DA/2914:2916,1/DA/2930:2936NA
241/DA/3299:3300,1/DA/3314:3320,1/DA/3387:3389NA
251/DC/9:14,1/DC/64:66,1/DC/107:109NA

Problematic loops

#loop idProblemSequence
1984, 985, 986, 987, 1064, 1067, 1093, 1094, 1100
21537, 1538, 1539, 1540, 1541, 1542, 1551, 1552, 1560, 1579, 1580, 1581, 1582, 1583, 1584
31630, 1631, 1640, 1641, 1645, 1810, 1811

Coloring options: