Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
HL_6B4V_0011/A/12:22No text annotation
Not in a motif group
homologous
HL_4LFB_001
HL_89881.2
HL_6B4V_0021/A/79:90No text annotation
Not in a motif group
HL_6B4V_0031/A/158:163GNRA
Not in a motif group
homologous
HL_4LFB_003
HL_42097.2
HL_6B4V_0041/A/186G:191ANo text annotation
Not in a motif group
homologous
HL_4LFB_004
HL_10278.1
HL_6B4V_0051/A/200:217No text annotation
Not in a motif group
HL_6B4V_0061/A/258:268No text annotation
Not in a motif group
HL_6B4V_0071/A/296:301GNRA
Not in a motif group
homologous
HL_4LFB_007
HL_42097.2
HL_6B4V_0081/A/320:333No text annotation
Not in a motif group
homologous
HL_4LFB_008
HL_81205.2
HL_6B4V_0091/A/342:347UNCG
Not in a motif group
homologous
HL_4LFB_009
HL_03562.2
HL_6B4V_0101/A/379:384GNRA
Not in a motif group
homologous
HL_5J7L_010
HL_42097.2
HL_6B4V_0111/A/419:424UNCG
Not in a motif group
homologous
HL_4LFB_011
HL_03562.2
HL_6B4V_0121/A/455:477No text annotation
Not in a motif group
HL_6B4V_0131/A/521:528No text annotation
Not in a motif group
homologous
HL_4LFB_013
NA
HL_6B4V_0141/A/617:623No text annotation
Not in a motif group
homologous
HL_4LFB_014
HL_26881.1
HL_6B4V_0151/A/689:698No text annotation
Not in a motif group
homologous
HL_4LFB_015
HL_12326.1
HL_6B4V_0161/A/726:731Other HL
Not in a motif group
homologous
HL_4LFB_016
HL_87030.2
HL_6B4V_0171/A/786:796No text annotation
Not in a motif group
homologous
HL_6CZR_088
HL_12326.1
HL_6B4V_0181/A/837:849No text annotation
Not in a motif group
HL_6B4V_0191/A/862:867GNRA
Not in a motif group
homologous
HL_4LFB_019
HL_42097.2
HL_6B4V_0201/A/897:902GNRA
Not in a motif group
homologous
HL_4LFB_020
HL_42097.2
HL_6B4V_0211/A/963:972No text annotation
Not in a motif group
homologous
HL_4LFB_021
NA
HL_6B4V_0221/A/1012:1017GNRA
Not in a motif group
homologous
HL_4LFB_022
HL_42097.2
HL_6B4V_0231/A/1076:1081GNRA
Not in a motif group
homologous
HL_4LFB_024
HL_42097.2
HL_6B4V_0241/A/1089:1096No text annotation
Not in a motif group
homologous
HL_4LFB_025
HL_71554.2
HL_6B4V_0251/A/1129:1143No text annotation
Not in a motif group
HL_6B4V_0261/A/1164:1172No text annotation
Not in a motif group
geometric
HL_7A0S_056
HL_84085.2
HL_6B4V_0271/A/1264:1271No text annotation
Not in a motif group
geometric
HL_4WF9_053
HL_09136.1
HL_6B4V_0281/A/1314:1323No text annotation
Not in a motif group
homologous
HL_4LFB_029
HL_89380.2
HL_6B4V_0291/A/1355:1367No text annotation
Not in a motif group
HL_6B4V_0301/A/1449:1454No text annotation
Not in a motif group
geometric
HL_1WZ2_007
HL_10278.1
HL_6B4V_0311/A/1515:1520No text annotation
Not in a motif group
homologous
HL_4LFB_032
NA
HL_6B4V_0321/B/59:68No text annotation
Not in a motif group
homologous
HL_7RQB_001
HL_99167.1
HL_6B4V_0331/B/87:95No text annotation
Not in a motif group
homologous
HL_7RQB_002
HL_96598.1
HL_6B4V_0341/B/123:128No text annotation
Not in a motif group
homologous
HL_5J7L_136
HL_75407.1
HL_6B4V_0351/B/137B:141BNo text annotation
Not in a motif group
homologous
HL_7RQB_004
HL_79921.3
HL_6B4V_0361/B/154:172No text annotation
Not in a motif group
HL_6B4V_0371/B/194:201No text annotation
Not in a motif group
geometric
HL_5J7L_139
HL_06192.2
HL_6B4V_0381/B/225:230No text annotation
Not in a motif group
homologous
HL_7RQB_007
HL_02862.2
HL_6B4V_0391/B/246:252No text annotation
Not in a motif group
homologous
HL_5J7L_141
HL_67216.7
HL_6B4V_0401/B/270J:270RNo text annotation
Not in a motif group
HL_6B4V_0411/B/305:312No text annotation
Not in a motif group
homologous
HL_7RQB_010
HL_89380.2
HL_6B4V_0421/B/327:335No text annotation
Not in a motif group
homologous
HL_5J7L_144
HL_08002.9
HL_6B4V_0431/B/382:392No text annotation
Not in a motif group
homologous
HL_7RQB_013
HL_91503.4
HL_6B4V_0441/B/410:417No text annotation
Not in a motif group
homologous
HL_7RQB_014
HL_96598.1
HL_6B4V_0451/B/462:467GNRA
Not in a motif group
homologous
HL_4WF9_015
HL_42097.2
HL_6B4V_0461/B/487:493No text annotation
Not in a motif group
homologous
HL_7RQB_016
HL_42097.2
HL_6B4V_0471/B/544:549No text annotation
Not in a motif group
geometric
HL_5U3G_001
HL_87030.2
HL_6B4V_0481/B/566:575No text annotation
Not in a motif group
geometric
HL_7A0S_018
HL_89380.2
HL_6B4V_0491/B/611:617No text annotation
Not in a motif group
homologous
HL_7RQB_019
HL_32369.1
HL_6B4V_0501/B/629:634GNRA
Not in a motif group
homologous
HL_5J7L_152
HL_42097.2
HL_6B4V_0511/B/641:647GNRA with one bulged base
Not in a motif group
homologous
HL_4WF9_021
HL_42097.2
HL_6B4V_0521/B/712:719No text annotation
Not in a motif group
homologous
HL_7RQB_022
HL_84085.2
HL_6B4V_0531/B/744:753No text annotation
Not in a motif group
homologous
HL_7RQB_023
HL_39334.6
HL_6B4V_0541/B/779:785No text annotation
Not in a motif group
homologous
HL_5J7L_156
HL_74322.1
HL_6B4V_0551/B/826:831No text annotation
Not in a motif group
homologous
HL_5J7L_157
HL_64365.1
HL_6B4V_0561/B/882:894No text annotation
Not in a motif group
HL_6B4V_0571/B/955:962No text annotation
Not in a motif group
homologous
HL_7RQB_027
HL_42097.2
HL_6B4V_0581/B/978:985No text annotation
Not in a motif group
homologous
HL_7RQB_028
HL_64430.2
HL_6B4V_0591/B/1055:1104No text annotation
Not in a motif group
HL_6B4V_0601/B/1169:1180No text annotation
Not in a motif group
HL_6B4V_0611/B/1222:1227No text annotation
Not in a motif group
homologous
HL_7RQB_032
HL_42097.2
HL_6B4V_0621/B/1281:1289No text annotation
Not in a motif group
homologous
HL_7RQB_033
HL_89380.2
HL_6B4V_0631/B/1324:1330No text annotation
Not in a motif group
homologous
HL_7RQB_034
HL_46680.1
HL_6B4V_0641/B/1363:1368No text annotation
Not in a motif group
homologous
HL_7RQB_035
HL_87030.2
HL_6B4V_0651/B/1389:1398No text annotation
Not in a motif group
homologous
HL_7RQB_036
HL_69023.2
HL_6B4V_0661/B/1451:1459No text annotation
Not in a motif group
geometric
HL_7RQB_037
HL_32426.1
HL_6B4V_0671/B/1492:1498No text annotation
Not in a motif group
homologous
HL_7RQB_038
HL_46680.1
HL_6B4V_0681/B/1533:1538No text annotation
Not in a motif group
HL_6B4V_0691/B/1565:1568No text annotation
Not in a motif group
homologous
HL_7RQB_039
HL_38927.2
HL_6B4V_0701/B/1612:1619No text annotation
Not in a motif group
homologous
HL_7RQB_040
HL_64430.2
HL_6B4V_0711/B/1630B:1635No text annotation
Not in a motif group
homologous
HL_7RQB_041
HL_01057.1
HL_6B4V_0721/B/1691:1696UNCG
Not in a motif group
geometric
HL_5J7L_175
HL_03562.2
HL_6B4V_0731/B/1727:1733No text annotation
Not in a motif group
homologous
HL_7RQB_043
HL_43656.2
HL_6B4V_0741/B/1777:1787No text annotation
Not in a motif group
homologous
HL_5J7L_178
HL_43613.5
HL_6B4V_0751/B/1806:1811No text annotation
Not in a motif group
homologous
HL_7RQB_046
HL_42097.2
HL_6B4V_0761/B/1864:1878No text annotation
Not in a motif group
homologous
HL_7RQB_047
HL_42097.2
HL_6B4V_0771/B/1909:1921No text annotation
Not in a motif group
homologous
HL_7RQB_048
NA
HL_6B4V_0781/B/1949:1957No text annotation
Not in a motif group
homologous
HL_4WF9_046
HL_51824.1
HL_6B4V_0791/B/2027:2036No text annotation
Not in a motif group
homologous
HL_7RQB_050
HL_90642.6
HL_6B4V_0801/B/2139:2152No text annotation
Not in a motif group
HL_6B4V_0811/B/2209:2215No text annotation
Not in a motif group
homologous
HL_7RQB_052
HL_98426.1
HL_6B4V_0821/B/2248:2256No text annotation
Not in a motif group
homologous
HL_7RQB_053
NA
HL_6B4V_0831/B/2264:2276No text annotation
Not in a motif group
homologous
HL_7RQB_054
HL_19870.6
HL_6B4V_0841/B/2302:2314No text annotation
Not in a motif group
HL_6B4V_0851/B/2324:2331No text annotation
Not in a motif group
homologous
HL_7RQB_056
HL_12078.2
HL_6B4V_0861/B/2355:2362No text annotation
Not in a motif group
homologous
HL_7RQB_057
HL_09136.1
HL_6B4V_0871/B/2374:2379No text annotation
Not in a motif group
homologous
HL_7RQB_058
HL_42097.2
HL_6B4V_0881/B/2404:2413No text annotation
Not in a motif group
homologous
HL_7A0S_058
HL_30784.2
HL_6B4V_0891/B/2471:2479No text annotation
Not in a motif group
homologous
HL_4WF9_056
HL_06192.2
HL_6B4V_0901/B/2528:2535No text annotation
Not in a motif group
homologous
HL_7RQB_061
HL_91104.1
HL_6B4V_0911/B/2551:2557No text annotation
Not in a motif group
homologous
HL_5J7L_195
NA
HL_6B4V_0921/B/2594:2599GNRA
Not in a motif group
homologous
HL_4WF9_059
HL_42097.2
HL_6B4V_0931/B/2658:2663GNRA
Not in a motif group
geometric
HL_1MZP_001
HL_42097.2
HL_6B4V_0941/B/2701:2706No text annotation
Not in a motif group
homologous
HL_7RQB_065
HL_53171.2
HL_6B4V_0951/B/2745:2759No text annotation
Not in a motif group
homologous
HL_7RQB_066
HL_56677.7
HL_6B4V_0961/B/2819:2827No text annotation
Not in a motif group
homologous
HL_5J7L_201
HL_27930.1
HL_6B4V_0971/B/2856:2861No text annotation
Not in a motif group
homologous
HL_7RQB_069
HL_42097.2
HL_6B4V_0981/C/38:44No text annotation
Not in a motif group
geometric
HL_5NFV_001
HL_76539.2
HL_6B4V_0991/C/85:91No text annotation
Not in a motif group
geometric
HL_7A0S_056
HL_84085.2
HL_6B4V_1001/D/31:39No text annotation
Not in a motif group
homologous
HL_4YCP_002
NA
HL_6B4V_1011/D/53:61No text annotation
Not in a motif group
homologous
HL_1H3E_004
NA
HL_6B4V_1021/EB/12:22No text annotation
Not in a motif group
homologous
HL_4LFB_001
HL_89881.2
HL_6B4V_1031/EB/79:90No text annotation
Not in a motif group
HL_6B4V_1041/EB/158:163GNRA
Not in a motif group
homologous
HL_4LFB_003
HL_42097.2
HL_6B4V_1051/EB/186G:191ANo text annotation
Not in a motif group
homologous
HL_4LFB_004
HL_10278.1
HL_6B4V_1061/EB/200:217No text annotation
Not in a motif group
HL_6B4V_1071/EB/258:268No text annotation
Not in a motif group
HL_6B4V_1081/EB/296:301GNRA
Not in a motif group
homologous
HL_4LFB_007
HL_42097.2
HL_6B4V_1091/EB/320:333No text annotation
Not in a motif group
homologous
HL_4LFB_008
HL_81205.2
HL_6B4V_1101/EB/342:347UNCG
Not in a motif group
homologous
HL_4LFB_009
HL_03562.2
HL_6B4V_1111/EB/379:384GNRA
Not in a motif group
homologous
HL_5J7L_010
HL_42097.2
HL_6B4V_1121/EB/419:424UNCG
Not in a motif group
homologous
HL_4LFB_011
HL_03562.2
HL_6B4V_1131/EB/455:477No text annotation
Not in a motif group
HL_6B4V_1141/EB/521:528No text annotation
Not in a motif group
homologous
HL_4LFB_013
NA
HL_6B4V_1151/EB/617:623No text annotation
Not in a motif group
homologous
HL_4LFB_014
HL_26881.1
HL_6B4V_1161/EB/689:698No text annotation
Not in a motif group
homologous
HL_4LFB_015
HL_12326.1
HL_6B4V_1171/EB/726:731Other HL
Not in a motif group
homologous
HL_4LFB_016
HL_87030.2
HL_6B4V_1181/EB/786:796No text annotation
Not in a motif group
homologous
HL_6CZR_088
HL_12326.1
HL_6B4V_1191/EB/837:849No text annotation
Not in a motif group
HL_6B4V_1201/EB/862:867GNRA
Not in a motif group
homologous
HL_4LFB_019
HL_42097.2
HL_6B4V_1211/EB/897:902GNRA
Not in a motif group
homologous
HL_4LFB_020
HL_42097.2
HL_6B4V_1221/EB/963:972No text annotation
Not in a motif group
homologous
HL_4LFB_021
NA
HL_6B4V_1231/EB/1012:1017GNRA
Not in a motif group
homologous
HL_4LFB_022
HL_42097.2
HL_6B4V_1241/EB/1076:1081GNRA
Not in a motif group
homologous
HL_4LFB_024
HL_42097.2
HL_6B4V_1251/EB/1089:1096No text annotation
Not in a motif group
homologous
HL_4LFB_025
HL_71554.2
HL_6B4V_1261/EB/1129:1143No text annotation
Not in a motif group
HL_6B4V_1271/EB/1164:1172No text annotation
Not in a motif group
geometric
HL_7A0S_056
HL_84085.2
HL_6B4V_1281/EB/1264:1271No text annotation
Not in a motif group
geometric
HL_4WF9_053
HL_09136.1
HL_6B4V_1291/EB/1314:1323No text annotation
Not in a motif group
homologous
HL_4LFB_029
HL_89380.2
HL_6B4V_1301/EB/1355:1367No text annotation
Not in a motif group
HL_6B4V_1311/EB/1449:1454No text annotation
Not in a motif group
geometric
HL_1WZ2_007
HL_10278.1
HL_6B4V_1321/EB/1515:1520No text annotation
Not in a motif group
homologous
HL_4LFB_032
NA
HL_6B4V_1331/FB/59:68No text annotation
Not in a motif group
homologous
HL_7RQB_001
HL_99167.1
HL_6B4V_1341/FB/87:95No text annotation
Not in a motif group
homologous
HL_7RQB_002
HL_96598.1
HL_6B4V_1351/FB/123:128No text annotation
Not in a motif group
homologous
HL_5J7L_136
HL_75407.1
HL_6B4V_1361/FB/137B:141BNo text annotation
Not in a motif group
homologous
HL_7RQB_004
HL_79921.3
HL_6B4V_1371/FB/154:172No text annotation
Not in a motif group
HL_6B4V_1381/FB/194:201No text annotation
Not in a motif group
homologous
HL_5J7L_139
HL_06192.2
HL_6B4V_1391/FB/225:230No text annotation
Not in a motif group
homologous
HL_7RQB_007
HL_02862.2
HL_6B4V_1401/FB/246:252No text annotation
Not in a motif group
homologous
HL_5J7L_141
HL_67216.7
HL_6B4V_1411/FB/270J:270RNo text annotation
Not in a motif group
HL_6B4V_1421/FB/305:312No text annotation
Not in a motif group
homologous
HL_7RQB_010
HL_89380.2
HL_6B4V_1431/FB/327:335No text annotation
Not in a motif group
homologous
HL_5J7L_144
HL_08002.9
HL_6B4V_1441/FB/382:392No text annotation
Not in a motif group
homologous
HL_7RQB_013
HL_91503.4
HL_6B4V_1451/FB/410:417No text annotation
Not in a motif group
homologous
HL_7RQB_014
HL_96598.1
HL_6B4V_1461/FB/462:467GNRA
Not in a motif group
homologous
HL_4WF9_015
HL_42097.2
HL_6B4V_1471/FB/487:493No text annotation
Not in a motif group
homologous
HL_7RQB_016
HL_42097.2
HL_6B4V_1481/FB/544:549No text annotation
Not in a motif group
geometric
HL_5U3G_001
HL_87030.2
HL_6B4V_1491/FB/566:575No text annotation
Not in a motif group
homologous
HL_7A0S_018
HL_89380.2
HL_6B4V_1501/FB/611:617No text annotation
Not in a motif group
homologous
HL_7RQB_019
HL_32369.1
HL_6B4V_1511/FB/629:634GNRA
Not in a motif group
homologous
HL_5J7L_152
HL_42097.2
HL_6B4V_1521/FB/641:647GNRA with one bulged base
Not in a motif group
homologous
HL_4WF9_021
HL_42097.2
HL_6B4V_1531/FB/712:719No text annotation
Not in a motif group
homologous
HL_7RQB_022
HL_84085.2
HL_6B4V_1541/FB/744:753No text annotation
Not in a motif group
homologous
HL_7RQB_023
HL_39334.6
HL_6B4V_1551/FB/779:785No text annotation
Not in a motif group
homologous
HL_5J7L_156
HL_74322.1
HL_6B4V_1561/FB/826:831No text annotation
Not in a motif group
homologous
HL_5J7L_157
HL_64365.1
HL_6B4V_1571/FB/882:894No text annotation
Not in a motif group
HL_6B4V_1581/FB/955:962No text annotation
Not in a motif group
homologous
HL_7RQB_027
HL_42097.2
HL_6B4V_1591/FB/978:985No text annotation
Not in a motif group
homologous
HL_7RQB_028
HL_64430.2
HL_6B4V_1601/FB/1055:1104No text annotation
Not in a motif group
HL_6B4V_1611/FB/1169:1180No text annotation
Not in a motif group
HL_6B4V_1621/FB/1222:1227No text annotation
Not in a motif group
homologous
HL_7RQB_032
HL_42097.2
HL_6B4V_1631/FB/1281:1289No text annotation
Not in a motif group
homologous
HL_7RQB_033
HL_89380.2
HL_6B4V_1641/FB/1324:1330No text annotation
Not in a motif group
homologous
HL_7RQB_034
HL_46680.1
HL_6B4V_1651/FB/1363:1368No text annotation
Not in a motif group
homologous
HL_7RQB_035
HL_87030.2
HL_6B4V_1661/FB/1389:1398No text annotation
Not in a motif group
homologous
HL_7RQB_036
HL_69023.2
HL_6B4V_1671/FB/1451:1459No text annotation
Not in a motif group
geometric
HL_7RQB_037
HL_32426.1
HL_6B4V_1681/FB/1492:1498No text annotation
Not in a motif group
homologous
HL_7RQB_038
HL_46680.1
HL_6B4V_1691/FB/1533:1538No text annotation
Not in a motif group
HL_6B4V_1701/FB/1565:1568No text annotation
Not in a motif group
homologous
HL_7RQB_039
HL_38927.2
HL_6B4V_1711/FB/1612:1619No text annotation
Not in a motif group
homologous
HL_7RQB_040
HL_64430.2
HL_6B4V_1721/FB/1630B:1635No text annotation
Not in a motif group
homologous
HL_7RQB_041
HL_01057.1
HL_6B4V_1731/FB/1691:1696UNCG
Not in a motif group
geometric
HL_5J7L_175
HL_03562.2
HL_6B4V_1741/FB/1727:1733No text annotation
Not in a motif group
homologous
HL_7RQB_043
HL_43656.2
HL_6B4V_1751/FB/1777:1787No text annotation
Not in a motif group
homologous
HL_5J7L_178
HL_43613.5
HL_6B4V_1761/FB/1806:1811No text annotation
Not in a motif group
homologous
HL_7RQB_046
HL_42097.2
HL_6B4V_1771/FB/1864:1878No text annotation
Not in a motif group
homologous
HL_7RQB_047
HL_42097.2
HL_6B4V_1781/FB/1909:1921No text annotation
Not in a motif group
homologous
HL_7RQB_048
NA
HL_6B4V_1791/FB/1949:1957No text annotation
Not in a motif group
homologous
HL_4WF9_046
HL_51824.1
HL_6B4V_1801/FB/2027:2036No text annotation
Not in a motif group
homologous
HL_7RQB_050
HL_90642.6
HL_6B4V_1811/FB/2139:2152No text annotation
Not in a motif group
HL_6B4V_1821/FB/2209:2215No text annotation
Not in a motif group
homologous
HL_7RQB_052
HL_98426.1
HL_6B4V_1831/FB/2248:2256No text annotation
Not in a motif group
homologous
HL_7RQB_053
NA
HL_6B4V_1841/FB/2264:2276No text annotation
Not in a motif group
homologous
HL_7RQB_054
HL_19870.6
HL_6B4V_1851/FB/2302:2314No text annotation
Not in a motif group
HL_6B4V_1861/FB/2324:2331No text annotation
Not in a motif group
homologous
HL_7RQB_056
HL_12078.2
HL_6B4V_1871/FB/2355:2362No text annotation
Not in a motif group
homologous
HL_7RQB_057
HL_09136.1
HL_6B4V_1881/FB/2374:2379No text annotation
Not in a motif group
homologous
HL_7RQB_058
HL_42097.2
HL_6B4V_1891/FB/2404:2413No text annotation
Not in a motif group
homologous
HL_7A0S_058
HL_30784.2
HL_6B4V_1901/FB/2471:2479No text annotation
Not in a motif group
homologous
HL_4WF9_056
HL_06192.2
HL_6B4V_1911/FB/2528:2535No text annotation
Not in a motif group
homologous
HL_7RQB_061
HL_91104.1
HL_6B4V_1921/FB/2551:2557No text annotation
Not in a motif group
homologous
HL_5J7L_195
NA
HL_6B4V_1931/FB/2594:2599GNRA
Not in a motif group
homologous
HL_4WF9_059
HL_42097.2
HL_6B4V_1941/FB/2658:2663GNRA
Not in a motif group
geometric
HL_1MZP_001
HL_42097.2
HL_6B4V_1951/FB/2701:2706No text annotation
Not in a motif group
homologous
HL_7RQB_065
HL_53171.2
HL_6B4V_1961/FB/2745:2759No text annotation
Not in a motif group
homologous
HL_7RQB_066
HL_56677.7
HL_6B4V_1971/FB/2819:2827No text annotation
Not in a motif group
homologous
HL_5J7L_201
HL_27930.1
HL_6B4V_1981/FB/2856:2861No text annotation
Not in a motif group
homologous
HL_7RQB_069
HL_42097.2
HL_6B4V_1991/GB/38:44No text annotation
Not in a motif group
geometric
HL_5NFV_001
HL_76539.2
HL_6B4V_2001/GB/85:91No text annotation
Not in a motif group
geometric
HL_7A0S_056
HL_84085.2
HL_6B4V_2011/HB/31:39No text annotation
Not in a motif group
homologous
HL_1H3E_002
NA
HL_6B4V_2021/HB/53:61No text annotation
Not in a motif group
homologous
HL_1H3E_004
NA
HL_6B4V_2031/IA/13:22No text annotation
Not in a motif group
homologous
HL_4LCK_001
NA
HL_6B4V_2041/IA/31:39No text annotation
Not in a motif group
homologous
HL_5E81_212
NA
HL_6B4V_2051/IA/51:63No text annotation
Not in a motif group
homologous
HL_5EL4_223
NA
HL_6B4V_2061/MC/13:22No text annotation
Not in a motif group
homologous
HL_4LCK_001
NA
HL_6B4V_2071/MC/31:39No text annotation
Not in a motif group
homologous
HL_5E81_212
NA
HL_6B4V_2081/MC/51:63No text annotation
Not in a motif group
homologous
HL_5EL4_223
NA

Problematic loops

No problematic loops

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
IL_6B4V_0011/A/30:32,
1/A/552:553
Single bulged G
Not in a motif group
homologous
IL_4LFB_001
IL_00225.3
IL_6B4V_0021/A/44:45,
1/A/396:398
Single bulged A
Not in a motif group
homologous
IL_4LFB_002
IL_37497.3
IL_6B4V_0031/A/47:52,
1/A/359:361
No text annotation
Not in a motif group
homologous
IL_4LFB_003
IL_11178.1
IL_6B4V_0041/A/54:56,
1/A/356:357
Minor groove platform
Not in a motif group
homologous
IL_4LFB_004
IL_93353.1
IL_6B4V_0051/A/63:66,
1/A/103:104
Multiple bulged bases
Not in a motif group
homologous
IL_5J7L_005
IL_76389.1
IL_6B4V_0061/A/67:69,
1/A/99:102
No text annotation
Not in a motif group
homologous
IL_4LFB_006
IL_95997.1
IL_6B4V_0071/A/129A:131,
1/A/231:232
Multiple bulged bases
Not in a motif group
homologous
IL_4LFB_007
IL_16396.2
IL_6B4V_0081/A/132:136,
1/A/227:230
No text annotation
Not in a motif group
homologous
IL_4LFB_008
IL_58764.3
IL_6B4V_0091/A/146:153,
1/A/168:176
No text annotation
Not in a motif group
IL_6B4V_0101/A/186A:186C,
1/A/191E:191G
No text annotation
Not in a motif group
homologous
IL_4LFB_010
IL_95997.1
IL_6B4V_0111/A/242:247,
1/A/277:284
Kink-turn with non-sequential stacking
Not in a motif group
homologous
IL_4LFB_011
IL_45067.2
IL_6B4V_0121/A/249:252,
1/A/274:275
No text annotation
Not in a motif group
homologous
IL_5J7L_015
IL_48100.2
IL_6B4V_0131/A/292:293,
1/A/304:308
C-loop
Not in a motif group
homologous
IL_6CZR_125
IL_37712.2
IL_6B4V_0141/A/371:375,
1/A/389:390
C-loop
Not in a motif group
homologous
IL_6CZR_127
IL_75255.1
IL_6B4V_0161/A/409:417,
1/A/426:433
No text annotation
Not in a motif group
homologous
IL_6CZR_129
IL_58819.1
IL_6B4V_0171/A/446:450,
1/A/483:488
6x5 Sarcin-Ricin; G-bulge
Not in a motif group
geometric
IL_4LFB_018
IL_88269.3
IL_6B4V_0181/A/450:455,
1/A/477:483
No text annotation
Not in a motif group
homologous
IL_4LFB_019
IL_11882.1
IL_6B4V_0191/A/504:511,
1/A/540:541
SSU/LSU pseudoknot
Not in a motif group
homologous
IL_4LFB_020
IL_15861.7
IL_6B4V_0201/A/514:521,
1/A/528:537
No text annotation
Not in a motif group
IL_6B4V_0211/A/569:575,
1/A/880:881
No text annotation
Not in a motif group
homologous
IL_4LFB_022
IL_69996.1
IL_6B4V_0221/A/580:584,
1/A/757:761
tSH-tHW-tHS
Not in a motif group
homologous
IL_4LFB_023
IL_17136.1
IL_6B4V_0231/A/594:596,
1/A/644:645
Major groove platform
Not in a motif group
homologous
IL_4LFB_024
IL_27635.2
IL_6B4V_0241/A/597:598,
1/A/640:643
Major groove minor groove platform; mini C-loop
Not in a motif group
homologous
IL_4LFB_025
IL_09061.6
IL_6B4V_0251/A/605:612,
1/A/628:633
No text annotation
Not in a motif group
homologous
IL_4LFB_026
IL_78349.1
IL_6B4V_0261/A/657:658,
1/A/747:749
Major groove platform
Not in a motif group
homologous
IL_4LFB_028
IL_27635.2
IL_6B4V_0271/A/662:666,
1/A/740:743
Tandem non-canonical cWW pairs
Not in a motif group
homologous
IL_4LFB_029
IL_71110.1
IL_6B4V_0281/A/673:678,
1/A/712:717
No text annotation
Not in a motif group
homologous
IL_5J7L_034
IL_04668.1
IL_6B4V_0291/A/683:688,
1/A/699:707
Kink-turn
Not in a motif group
homologous
IL_4LFB_031
IL_37722.1
IL_6B4V_0301/A/774:778,
1/A/804:805
Left turn
Not in a motif group
homologous
IL_4LFB_032
IL_29346.1
IL_6B4V_0311/A/779:783,
1/A/799:803
tSH-tHW-tHS
Not in a motif group
homologous
IL_4LFB_033
IL_17136.1
IL_6B4V_0321/A/887:894,
1/A/905:910
8x6 Sarcin-Ricin with inserted Y; G-bulge
Not in a motif group
homologous
IL_5J7L_038
IL_24606.2
IL_6B4V_0331/A/922:923,
1/A/1393:1395
Single bulged A
Not in a motif group
homologous
IL_4LFB_035
IL_37497.3
IL_6B4V_0341/A/925:927,
1/A/1390:1391
Single bulged G
Not in a motif group
homologous
IL_4LFB_036
IL_00225.3
IL_6B4V_0351/A/933:936,
1/A/1379:1384
No text annotation
Not in a motif group
homologous
IL_6CZR_149
IL_93211.1
IL_6B4V_0361/A/953:954,
1/A/1226:1228
Minor groove platform
Not in a motif group
homologous
IL_5J7L_042
IL_42622.2
IL_6B4V_0371/A/993:997,
1/A/1044:1045
Minor groove platform
Not in a motif group
homologous
IL_4LFB_039
IL_47078.1
IL_6B4V_0381/A/1047:1050,
1/A/1208:1210
No text annotation
Not in a motif group
geometric
IL_1Y27_001
IL_51629.2
IL_6B4V_0391/A/1050:1056,
1/A/1204:1208
No text annotation
Not in a motif group
IL_6B4V_0401/A/1057:1058,
1/A/1199:1203
Minor groove platform
Not in a motif group
homologous
IL_4LFB_045
IL_93353.1
IL_6B4V_0411/A/1060:1061,
1/A/1195:1197
Single bulged U
Not in a motif group
homologous
IL_6CZR_156
IL_83039.14
IL_6B4V_0421/A/1061:1063,
1/A/1193:1195
No text annotation
Not in a motif group
geometric
IL_4LFB_047
IL_95997.1
IL_6B4V_0431/A/1122:1128,
1/A/1144:1151
No text annotation
Not in a motif group
IL_6B4V_0441/A/1158:1163,
1/A/1173:1181
No text annotation
Not in a motif group
IL_6B4V_0451/A/1247:1253,
1/A/1284:1290
No text annotation
Not in a motif group
homologous
IL_4LFB_051
IL_09129.1
IL_6B4V_0461/A/1255:1258,
1/A/1277:1282
No text annotation
Not in a motif group
homologous
IL_6CZR_161
IL_75461.4
IL_6B4V_0471/A/1259:1263,
1/A/1272:1276
Triple sheared
Not in a motif group
homologous
IL_5J7L_056
IL_56467.8
IL_6B4V_0481/A/1303:1308,
1/A/1329:1334
No text annotation
Not in a motif group
geometric
IL_4LFB_055
IL_19954.2
IL_6B4V_0491/A/1399:1401,
1/A/1501:1504
No text annotation
Not in a motif group
geometric
IL_4V88_463
IL_36143.3
IL_6B4V_0501/A/1401:1405,
1/A/1496:1501
No text annotation
Not in a motif group
homologous
IL_4LFB_057
NA
IL_6B4V_0511/A/1405:1409,
1/A/1491:1496
No text annotation
Not in a motif group
IL_6B4V_0521/A/1412:1414,
1/A/1486:1488
No text annotation
Not in a motif group
homologous
IL_5J7L_061
IL_95997.1
IL_6B4V_0531/A/1416:1419,
1/A/1481:1484
Double sheared
Not in a motif group
homologous
IL_5J7L_062
IL_09705.9
IL_6B4V_0541/A/1431:1435,
1/A/1466:1469
UAA/GAN variation
Not in a motif group
homologous
IL_4LFB_062
IL_07235.1
IL_6B4V_0551/A/1435:1437,
1/A/1464:1466
No text annotation
Not in a motif group
geometric
IL_4LFB_063
IL_95997.1
IL_6B4V_0561/A/1440:1447,
1/A/1459:1461
Isolated basepair with bulged bases
Not in a motif group
homologous
IL_6CZR_172
IL_92788.2
IL_6B4V_0571/B/24:30,
1/B/510:516
Triple sheared with non-canonical cWW
Not in a motif group
geometric
IL_7RQB_001
IL_66414.6
IL_6B4V_0581/B/36:37,
1/B/442:444
Single bulged A
Not in a motif group
homologous
IL_7RQB_002
IL_37497.3
IL_6B4V_0591/B/41:45,
1/B/433:438
No text annotation
Not in a motif group
IL_6B4V_0601/B/81:85,
1/B/97:105
Kink-turn
Not in a motif group
homologous
IL_7RQB_004
IL_45067.2
IL_6B4V_0611/B/183:184,
1/B/212:214
Single stack bend
Not in a motif group
homologous
IL_7RQB_005
IL_76488.2
IL_6B4V_0621/B/188:194,
1/B/201:208
8x7 Sarcin-Ricin; G-bulge
Not in a motif group
homologous
IL_7RQB_006
IL_04346.7
IL_6B4V_0631/B/239:245,
1/B/253:258
7x6 Sarcin-Ricin; G-bulge
Not in a motif group
homologous
IL_7RQB_007
IL_76042.2
IL_6B4V_0651/B/272:273B,
1/B/363F:365
No text annotation
Not in a motif group
geometric
IL_6CZR_136
IL_05564.2
IL_6B4V_0661/B/273E:280,
1/B/360:363C
No text annotation
Not in a motif group
IL_6B4V_0671/B/280:284,
1/B/357:360
tSH-tHW
Not in a motif group
homologous
IL_7RQB_011
IL_04059.1
IL_6B4V_0681/B/288:290,
1/B/350:353
Isolated tHS basepair with bulges
Not in a motif group
homologous
IL_7RQB_012
IL_38958.7
IL_6B4V_0691/B/293:295,
1/B/343:347
No text annotation
Not in a motif group
homologous
IL_7RQB_013
IL_69440.1
IL_6B4V_0701/B/481:484,
1/B/496:509
No text annotation
Not in a motif group
geometric
IL_7RQB_014
IL_60992.6
IL_6B4V_0711/B/564:566,
1/B/575:577
No text annotation
Not in a motif group
homologous
IL_7RQB_015
IL_95997.1
IL_6B4V_0721/B/606:609B,
1/B/618B:622
AAA cross-strand stack
Not in a motif group
homologous
IL_7RQB_016
IL_17136.1
IL_6B4V_0731/B/672:674,
1/B/806:808
No text annotation
Not in a motif group
homologous
IL_7RQB_017
IL_95997.1
IL_6B4V_0741/B/674:678,
1/B/799:806
No text annotation
Not in a motif group
geometric
IL_7RQB_018
IL_17470.6
IL_6B4V_0751/B/697:698,
1/B/763:765
Single bulged A
Not in a motif group
geometric
IL_7A0S_016
IL_37497.3
IL_6B4V_0761/B/702:703,
1/B/728:730
Single bulged G
Not in a motif group
homologous
IL_4WF9_023
IL_00225.3
IL_6B4V_0771/B/703:707,
1/B/724:728
Triple sheared
Not in a motif group
geometric
IL_7RQB_021
IL_56467.8
IL_6B4V_0781/B/738:741,
1/B/756:758
Major groove platform with extra cWW
Not in a motif group
homologous
IL_7RQB_022
IL_05564.2
IL_6B4V_0791/B/775:777,
1/B/787:791
Multiple bulged bases
Not in a motif group
geometric
IL_7RQB_023
IL_90991.6
IL_6B4V_0801/B/837:838,
1/B/940:942
Single stack bend
Not in a motif group
homologous
IL_7RQB_024
IL_92001.1
IL_6B4V_0811/B/844:846,
1/B/931:934
Intercalated cWW
Not in a motif group
homologous
IL_7RQB_025
IL_52767.2
IL_6B4V_0821/B/846:850,
1/B/928:931
No text annotation
Not in a motif group
geometric
IL_7RQB_026
IL_94165.1
IL_6B4V_0831/B/858:862,
1/B/915:919
5x5 Sa