7TOR Internal, Hairpin and 3-way Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_7TOR_001 | 1/A18S/7:17 | No text annotation Not in a motif group | geometric HL_4V88_186 HL_89881.2 | |
| HL_7TOR_002 | 1/A18S/69:80 | No text annotation Not in a motif group | ||
| HL_7TOR_003 | 1/A18S/156:162 | No text annotation Not in a motif group | geometric HL_5TBW_006 HL_98984.2 | |
| HL_7TOR_004 | 1/A18S/197:202 | No text annotation Not in a motif group | geometric HL_7RQB_047 HL_42097.2 | |
| HL_7TOR_005 | 1/A18S/288:295 | T-loop with 1 bulged base Not in a motif group | geometric HL_4V88_191 HL_27930.1 | |
| HL_7TOR_007 | 1/A18S/377:387 | No text annotation Not in a motif group | ||
| HL_7TOR_008 | 1/A18S/416:421 | No text annotation Not in a motif group | geometric HL_4V88_194 HL_50142.2 | |
| HL_7TOR_009 | 1/A18S/441:452 | No text annotation Not in a motif group | geometric HL_4V88_195 HL_84288.1 | |
| HL_7TOR_010 | 1/A18S/462:467 | UNCG Not in a motif group | geometric HL_2HW8_001 HL_03562.2 | |
| HL_7TOR_011 | 1/A18S/498:504 | No text annotation Not in a motif group | geometric HL_5NFV_001 HL_76539.2 | |
| HL_7TOR_012 | 1/A18S/539:544 | No text annotation Not in a motif group | geometric HL_5J7L_179 HL_42097.2 | |
| HL_7TOR_013 | 1/A18S/569:581 | No text annotation Not in a motif group | geometric HL_4V88_199 HL_06285.2 | |
| HL_7TOR_014 | 1/A18S/618:623 | Other HL Not in a motif group | geometric HL_4V88_200 HL_53845.1 | |
| HL_7TOR_015 | 1/A18S/820:828 | No text annotation Not in a motif group | geometric HL_4V88_203 HL_46766.2 | |
| HL_7TOR_016 | 1/A18S/833:841 | No text annotation Not in a motif group | ||
| HL_7TOR_017 | 1/A18S/885:901 | No text annotation Not in a motif group | ||
| HL_7TOR_018 | 1/A18S/957:966 | No text annotation Not in a motif group | geometric HL_4V88_206 HL_12326.1 | |
| HL_7TOR_019 | 1/A18S/994:999 | Other HL Not in a motif group | geometric HL_4V88_207 HL_87030.2 | |
| HL_7TOR_020 | 1/A18S/1054:1064 | No text annotation Not in a motif group | geometric HL_4LFB_017 HL_12326.1 | |
| HL_7TOR_021 | 1/A18S/1114:1119 | No text annotation Not in a motif group | ||
| HL_7TOR_022 | 1/A18S/1141:1146 | Other HL Not in a motif group | geometric HL_4V88_210 HL_42097.2 | |
| HL_7TOR_023 | 1/A18S/1178:1183 | GNRA Not in a motif group | geometric HL_3LQX_001 HL_42097.2 | |
| HL_7TOR_024 | 1/A18S/1245:1254 | No text annotation Not in a motif group | geometric HL_4WF9_011 HL_75407.1 | |
| HL_7TOR_025 | 1/A18S/1295:1304 | No text annotation Not in a motif group | homologous HL_8C3A_218 HL_53597.2 | |
| HL_7TOR_026 | 1/A18S/1353:1358 | GNRA Not in a motif group | geometric HL_5J7L_027 HL_42097.2 | |
| HL_7TOR_027 | 1/A18S/1366:1373 | No text annotation Not in a motif group | geometric HL_4LFB_025 HL_71554.2 | |
| HL_7TOR_028 | 1/A18S/1416:1424 | No text annotation Not in a motif group | ||
| HL_7TOR_029 | 1/A18S/1460:1466 | No text annotation Not in a motif group | geometric HL_1F1T_001 HL_67216.7 | |
| HL_7TOR_030 | 1/A18S/1565:1570 | GNRA Not in a motif group | geometric HL_4V9F_015 HL_42097.2 | |
| HL_7TOR_031 | 1/A18S/1614:1625 | No text annotation Not in a motif group | geometric HL_4V88_219 HL_22554.1 | |
| HL_7TOR_032 | 1/A18S/1658:1666 | No text annotation Not in a motif group | geometric HL_4V88_220 HL_60812.1 | |
| HL_7TOR_033 | 1/A18S/1847:1852 | No text annotation Not in a motif group | geometric HL_5NFV_001 HL_76539.2 | |
| HL_7TOR_034 | 1/A28S/37:44 | No text annotation Not in a motif group | homologous HL_8C3A_001 HL_06192.2 | |
| HL_7TOR_035 | 1/A28S/68:73 | No text annotation Not in a motif group | homologous HL_8C3A_002 HL_02862.2 | |
| HL_7TOR_036 | 1/A28S/89:95 | No text annotation Not in a motif group | homologous HL_8C3A_003 HL_67216.7 | |
| HL_7TOR_037 | 1/A28S/131:137 | No text annotation Not in a motif group | geometric HL_1WZ2_007 HL_10278.1 | |
| HL_7TOR_038 | 1/A28S/204:211 | No text annotation Not in a motif group | homologous HL_8C3A_005 HL_89380.2 | |
| HL_7TOR_039 | 1/A28S/222:226 | No text annotation Not in a motif group | homologous HL_8C3A_006 HL_98984.2 | |
| HL_7TOR_040 | 1/A28S/230:238 | No text annotation Not in a motif group | homologous HL_8C3A_007 HL_08002.9 | |
| HL_7TOR_041 | 1/A28S/289:298 | No text annotation Not in a motif group | homologous HL_8C3A_008 HL_71554.2 | |
| HL_7TOR_042 | 1/A28S/314:323 | No text annotation Not in a motif group | homologous HL_8C3A_009 HL_12078.2 | |
| HL_7TOR_043 | 1/A28S/368:373 | No text annotation Not in a motif group | homologous HL_8C3A_010 HL_42097.2 | |
| HL_7TOR_044 | 1/A28S/393:398 | No text annotation Not in a motif group | homologous HL_8C3A_011 HL_42097.2 | |
| HL_7TOR_045 | 1/A28S/521:641 | No text annotation Not in a motif group | ||
| HL_7TOR_046 | 1/A28S/758:905 | No text annotation Not in a motif group | geometric HL_7RQB_011 HL_75407.1 | |
| HL_7TOR_047 | 1/A28S/962:970 | No text annotation Not in a motif group | geometric HL_4WF9_011 HL_75407.1 | |
| HL_7TOR_048 | 1/A28S/988:1066 | No text annotation Not in a motif group | ||
| HL_7TOR_049 | 1/A28S/1178:1183 | No text annotation Not in a motif group | ||
| HL_7TOR_050 | 1/A28S/1317:1326 | No text annotation Not in a motif group | homologous HL_8C3A_014 HL_89380.2 | |
| HL_7TOR_051 | 1/A28S/1364:1373 | No text annotation Not in a motif group | geometric HL_2Y8W_001 HL_01057.1 | |
| HL_7TOR_052 | 1/A28S/1389:1394 | No text annotation Not in a motif group | homologous HL_8C3A_016 HL_42097.2 | |
| HL_7TOR_053 | 1/A28S/1436:1448 | No text annotation Not in a motif group | geometric HL_2Y8W_001 HL_01057.1 | |
| HL_7TOR_054 | 1/A28S/1479:1486 | No text annotation Not in a motif group | ||
| HL_7TOR_055 | 1/A28S/1561:1566 | No text annotation Not in a motif group | homologous HL_8C3A_019 HL_42097.2 | |
| HL_7TOR_056 | 1/A28S/1593:1602 | No text annotation Not in a motif group | homologous HL_8C3A_020 HL_39334.6 | |
| HL_7TOR_057 | 1/A28S/1627:1635 | No text annotation Not in a motif group | homologous HL_8C3A_021 HL_33817.1 | |
| HL_7TOR_058 | 1/A28S/1675:1680 | No text annotation Not in a motif group | homologous HL_8C3A_022 HL_96598.1 | |
| HL_7TOR_059 | 1/A28S/1761:1772 | No text annotation Not in a motif group | ||
| HL_7TOR_060 | 1/A28S/1816:1823 | No text annotation Not in a motif group | ||
| HL_7TOR_061 | 1/A28S/1864:1870 | No text annotation Not in a motif group | homologous HL_8C3A_025 HL_42097.2 | |
| HL_7TOR_062 | 1/A28S/1886:1893 | No text annotation Not in a motif group | homologous HL_8C3A_026 HL_64430.2 | |
| HL_7TOR_063 | 1/A28S/1973:1993 | No text annotation Not in a motif group | ||
| HL_7TOR_064 | 1/A28S/2001:2016 | No text annotation Not in a motif group | ||
| HL_7TOR_065 | 1/A28S/2087:2270 | No text annotation Not in a motif group | ||
| HL_7TOR_066 | 1/A28S/2317:2322 | No text annotation Not in a motif group | homologous HL_8C3A_030 HL_42097.2 | |
| HL_7TOR_067 | 1/A28S/2376:2384 | No text annotation Not in a motif group | homologous HL_8C3A_031 HL_89380.2 | |
| HL_7TOR_068 | 1/A28S/2420:2426 | No text annotation Not in a motif group | homologous HL_8C3A_032 HL_46680.1 | |
| HL_7TOR_069 | 1/A28S/2458:2463 | No text annotation Not in a motif group | homologous HL_8C3A_033 HL_76539.2 | |
| HL_7TOR_070 | 1/A28S/2487:2491 | No text annotation Not in a motif group | ||
| HL_7TOR_071 | 1/A28S/2523:2532 | No text annotation Not in a motif group | homologous HL_8C3A_035 HL_69023.2 | |
| HL_7TOR_072 | 1/A28S/2561:2566 | Other HL Not in a motif group | geometric HL_6UFH_004 HL_42097.2 | |
| HL_7TOR_073 | 1/A28S/2578:2583 | No text annotation Not in a motif group | homologous HL_8C3A_036 HL_42097.2 | |
| HL_7TOR_074 | 1/A28S/2624:2632 | No text annotation Not in a motif group | homologous HL_8C3A_037 HL_60812.1 | |
| HL_7TOR_075 | 1/A28S/2664:2670 | No text annotation Not in a motif group | homologous HL_8C3A_038 HL_86373.2 | |
| HL_7TOR_076 | 1/A28S/2705:2710 | No text annotation Not in a motif group | geometric HL_5NFV_001 HL_76539.2 | |
| HL_7TOR_077 | 1/A28S/2738:2742 | No text annotation Not in a motif group | homologous HL_8C3A_040 HL_49678.1 | |
| HL_7TOR_078 | 1/A28S/2792:2799 | No text annotation Not in a motif group | homologous HL_8C3A_041 HL_64430.2 | |
| HL_7TOR_079 | 1/A28S/2810:2816 | No text annotation Not in a motif group | homologous HL_8C3A_042 HL_42097.2 | |
| HL_7TOR_080 | 1/A28S/2872:2877 | No text annotation Not in a motif group | homologous HL_8C3A_043 HL_03562.2 | |
| HL_7TOR_081 | 1/A28S/2900:3599 | No text annotation Not in a motif group | ||
| HL_7TOR_082 | 1/A28S/3614:3618 | No text annotation Not in a motif group | homologous HL_8C3A_045 HL_28980.1 | |
| HL_7TOR_083 | 1/A28S/3639:3649 | No text annotation Not in a motif group | homologous HL_8C3A_046 HL_43613.5 | |
| HL_7TOR_084 | 1/A28S/3668:3674 | No text annotation Not in a motif group | homologous HL_8C3A_047 HL_42097.2 | |
| HL_7TOR_085 | 1/A28S/3724:3729 | No text annotation Not in a motif group | homologous HL_8C3A_048 HL_42097.2 | |
| HL_7TOR_086 | 1/A28S/3757:3767 | No text annotation Not in a motif group | homologous HL_8C3A_049 HL_71924.2 | |
| HL_7TOR_087 | 1/A28S/3796:3804 | No text annotation Not in a motif group | homologous HL_8C3A_050 HL_51824.1 | |
| HL_7TOR_088 | 1/A28S/3873:3882 | No text annotation Not in a motif group | homologous HL_8C3A_051 HL_90642.6 | |
| HL_7TOR_089 | 1/A28S/3975:4036 | No text annotation Not in a motif group | ||
| HL_7TOR_090 | 1/A28S/4099:4110 | No text annotation Not in a motif group | ||
| HL_7TOR_091 | 1/A28S/4193:4201 | No text annotation Not in a motif group | homologous HL_8C3A_055 HL_53171.2 | |
| HL_7TOR_092 | 1/A28S/4210:4222 | No text annotation Not in a motif group | homologous HL_8C3A_056 HL_19870.6 | |
| HL_7TOR_093 | 1/A28S/4250:4258 | No text annotation Not in a motif group | homologous HL_8C3A_057 HL_76406.4 | |
| HL_7TOR_094 | 1/A28S/4270:4277 | No text annotation Not in a motif group | homologous HL_8C3A_058 HL_12078.2 | |
| HL_7TOR_095 | 1/A28S/4301:4309 | No text annotation Not in a motif group | homologous HL_8C3A_059 HL_92229.2 | |
| HL_7TOR_096 | 1/A28S/4321:4326 | No text annotation Not in a motif group | homologous HL_8C3A_060 HL_42097.2 | |
| HL_7TOR_097 | 1/A28S/4352:4362 | No text annotation Not in a motif group | geometric HL_2ZZM_002 HL_23083.1 | |
| HL_7TOR_098 | 1/A28S/4417:4425 | No text annotation Not in a motif group | homologous HL_8C3A_062 HL_06192.2 | |
| HL_7TOR_099 | 1/A28S/4474:4481 | No text annotation Not in a motif group | homologous HL_8C3A_063 HL_91104.1 | |
| HL_7TOR_100 | 1/A28S/4497:4503 | No text annotation Not in a motif group | homologous HL_8C3A_064 HL_43656.2 | |
| HL_7TOR_101 | 1/A28S/4540:4545 | No text annotation Not in a motif group | homologous HL_8C3A_065 HL_42097.2 | |
| HL_7TOR_102 | 1/A28S/4603:4608 | No text annotation Not in a motif group | geometric HL_7A0S_063 HL_42097.2 | |
| HL_7TOR_103 | 1/A28S/4646:4651 | No text annotation Not in a motif group | homologous HL_8C3A_067 HL_46680.1 | |
| HL_7TOR_104 | 1/A28S/4688:4702 | No text annotation Not in a motif group | homologous HL_8C3A_068 HL_56677.7 | |
| HL_7TOR_105 | 1/A28S/4775:4860 | No text annotation Not in a motif group | ||
| HL_7TOR_106 | 1/A28S/4906:4915 | No text annotation Not in a motif group | geometric HL_5NFV_001 HL_76539.2 | |
| HL_7TOR_107 | 1/A28S/4975:4983 | No text annotation Not in a motif group | homologous HL_8C3A_071 HL_27930.1 | |
| HL_7TOR_108 | 1/A28S/5020:5029 | No text annotation Not in a motif group | ||
| HL_7TOR_109 | 1/A58S/47:56 | No text annotation Not in a motif group | geometric HL_7A0S_001 HL_99167.1 | |
| HL_7TOR_110 | 1/A58S/68:90 | No text annotation Not in a motif group | ||
| HL_7TOR_111 | 1/A58S/107:112 | No text annotation Not in a motif group | geometric HL_5TBW_006 HL_98984.2 | |
| HL_7TOR_112 | 1/A58S/121:129 | No text annotation Not in a motif group | geometric HL_5J7L_151 HL_90617.2 | |
| HL_7TOR_113 | 1/A5S/36:41 | No text annotation Not in a motif group | homologous HL_5J7L_203 HL_87939.1 | |
| HL_7TOR_114 | 1/A5S/86:91 | GNRA Not in a motif group | homologous HL_4V9F_072 HL_42097.2 | |
| HL_7TOR_115 | 1/ETRN/13:22 | No text annotation Not in a motif group | geometric HL_4V9F_003 HL_52841.1 | |
| HL_7TOR_116 | 1/ETRN/31:39 | No text annotation Not in a motif group | geometric HL_4WF9_004 HL_84085.2 | |
| HL_7TOR_117 | 1/ETRN/53:61 | T-loop with 1 bulged base Not in a motif group | geometric HL_4V9F_010 HL_89380.2 | |
| HL_7TOR_118 | 1/PTRN/13:22 | No text annotation Not in a motif group | geometric HL_4TUE_033 HL_25462.2 | |
| HL_7TOR_119 | 1/PTRN/31:39 | tRNA anticodon loop Not in a motif group | geometric HL_4TUE_034 HL_53597.2 | |
| HL_7TOR_120 | 1/PTRN/53:61 | T-loop with 2 stacked bulged bases Not in a motif group | geometric HL_4V9Q_215 HL_22280.1 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_7TOR_006 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_7TOR_001 | 1/A18S/23:25, 1/A18S/649:651 | No text annotation Not in a motif group | geometric IL_4WF9_042 IL_95997.1 | |
| IL_7TOR_002 | 1/A18S/34:36, 1/A18S/519:521 | No text annotation Not in a motif group | geometric IL_6IA2_002 IL_95997.1 | |
| IL_7TOR_003 | 1/A18S/37:40, 1/A18S/514:518 | Double sheared Not in a motif group | geometric IL_4WF9_016 IL_09705.9 | |
| IL_7TOR_004 | 1/A18S/41:47, 1/A18S/479:481 | No text annotation Not in a motif group | geometric IL_4V88_387 IL_33912.1 | |
| IL_7TOR_005 | 1/A18S/49:51, 1/A18S/476:477 | Minor groove platform Not in a motif group | geometric IL_4V88_388 IL_93353.1 | |
| IL_7TOR_006 | 1/A18S/57:62, 1/A18S/86:88 | No text annotation Not in a motif group | geometric IL_4V88_389 IL_95004.1 | |
| IL_7TOR_007 | 1/A18S/63:68, 1/A18S/81:85 | No text annotation Not in a motif group | geometric IL_4V88_390 IL_77691.1 | |
| IL_7TOR_008 | 1/A18S/108:110, 1/A18S/351:353 | No text annotation Not in a motif group | geometric IL_1T0E_002 IL_95997.1 | |
| IL_7TOR_009 | 1/A18S/110:115, 1/A18S/348:351 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_1MFQ_004 IL_30621.3 | |
| IL_7TOR_010 | 1/A18S/116:121, 1/A18S/343:347 | No text annotation Not in a motif group | geometric IL_4V88_393 IL_64181.2 | |
| IL_7TOR_012 | 1/A18S/145:151, 1/A18S/167:174 | tWH-tWH-tHW-tHW Not in a motif group | geometric IL_4V88_394 IL_80604.2 | |
| IL_7TOR_013 | 1/A18S/152:154, 1/A18S/164:166 | Isolated cWH basepair Not in a motif group | geometric IL_3R1C_032 IL_51629.2 | |
| IL_7TOR_014 | 1/A18S/188:192, 1/A18S/207:211 | Triple sheared Not in a motif group | geometric IL_5J7L_338 IL_56467.8 | |
| IL_7TOR_015 | 1/A18S/216:219, 1/A18S/302:309 | No text annotation Not in a motif group | ||
| IL_7TOR_016 | 1/A18S/223:288, 1/A18S/295:298 | No text annotation Not in a motif group | ||
| IL_7TOR_017 | 1/A18S/312:314, 1/A18S/336:337 | Single bulged A Not in a motif group | geometric IL_4V88_399 IL_37497.3 | |
| IL_7TOR_018 | 1/A18S/317:320, 1/A18S/331:333 | Other IL Not in a motif group | geometric IL_5TBW_064 IL_84698.1 | |
| IL_7TOR_019 | 1/A18S/359:364, 1/A18S/396:403 | Kink-turn with non-sequential stacking Not in a motif group | geometric IL_5J7L_014 IL_45067.2 | |
| IL_7TOR_020 | 1/A18S/366:371, 1/A18S/393:394 | No text annotation Not in a motif group | geometric IL_5Y58_001 IL_48100.2 | |
| IL_7TOR_021 | 1/A18S/411:413, 1/A18S/424:429 | No text annotation Not in a motif group | geometric IL_4V88_404 IL_11347.1 | |
| IL_7TOR_022 | 1/A18S/437:439, 1/A18S/454:456 | Isolated cWH basepair Not in a motif group | geometric IL_4V88_405 IL_51629.2 | |
| IL_7TOR_023 | 1/A18S/459:461, 1/A18S/468:470 | Isolated near basepair Not in a motif group | geometric IL_3NJ7_004 IL_52767.2 | |
| IL_7TOR_024 | 1/A18S/487:489, 1/A18S/511:512 | Single bulged U Not in a motif group | geometric IL_4LFB_014 IL_83039.14 | |
| IL_7TOR_025 | 1/A18S/491:495, 1/A18S/508:509 | C-loop Not in a motif group | geometric IL_5J7L_018 IL_75255.1 | |
| IL_7TOR_026 | 1/A18S/495:496, 1/A18S/506:508 | Single bulged G Not in a motif group | geometric IL_5J7L_019 IL_00225.3 | |
| IL_7TOR_027 | 1/A18S/529:530, 1/A18S/554:556 | Single bulged A Not in a motif group | geometric IL_6WPI_001 IL_37497.3 | |
| IL_7TOR_028 | 1/A18S/535:538, 1/A18S/545:549 | No text annotation Not in a motif group | ||
| IL_7TOR_029 | 1/A18S/563:565, 1/A18S/585:592 | No text annotation Not in a motif group | homologous IL_8C3A_420 IL_55023.1 | |
| IL_7TOR_030 | 1/A18S/566:569, 1/A18S/581:584 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_6JDV_001 IL_30621.3 | |
| IL_7TOR_031 | 1/A18S/599:608, 1/A18S/635:637 | No text annotation Not in a motif group | ||
| IL_7TOR_032 | 1/A18S/611:617, 1/A18S/624:632 | No text annotation Not in a motif group | geometric IL_4V88_415 IL_55871.1 | |
| IL_7TOR_033 | 1/A18S/663:665, 1/A18S/1162:1164 | No text annotation Not in a motif group | geometric IL_1Y27_001 IL_51629.2 | |
| IL_7TOR_034 | 1/A18S/665:671, 1/A18S/1161:1162 | No text annotation Not in a motif group | geometric IL_5J7L_026 IL_69996.1 | |
| IL_7TOR_035 | 1/A18S/673:675, 1/A18S/1030:1032 | CC cWW Not in a motif group | geometric IL_4E59_001 IL_95997.1 | |
| IL_7TOR_036 | 1/A18S/676:680, 1/A18S/1025:1029 | tSH-tHW-tHS Not in a motif group | geometric IL_5J7L_027 IL_17136.1 | |
| IL_7TOR_037 | 1/A18S/692:695, 1/A18S/731:734 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_5EW4_002 IL_30621.3 | |
| IL_7TOR_038 | 1/A18S/745:749, 1/A18S/794:796 | Not an internal loop Not in a motif group | geometric IL_5VCI_005 IL_82842.2 | |
| IL_7TOR_039 | 1/A18S/752:754, 1/A18S/790:791 | No text annotation Not in a motif group | ||
| IL_7TOR_040 | 1/A18S/802:803, 1/A18S/860:863 | Major groove minor groove platform; mini C-loop Not in a motif group | geometric IL_4V88_423 IL_09061.6 | |
| IL_7TOR_041 | 1/A18S/805:807, 1/A18S/856:858 | No text annotation Not in a motif group | geometric IL_4KNQ_003 IL_95997.1 | |
| IL_7TOR_042 | 1/A18S/807:816, 1/A18S/848:856 | No text annotation Not in a motif group | ||
| IL_7TOR_043 | 1/A18S/874:876, 1/A18S/910:912 | No text annotation Not in a motif group | geometric IL_4V88_417 IL_95997.1 | |
| IL_7TOR_044 | 1/A18S/877:879, 1/A18S/907:909 | No text annotation Not in a motif group | geometric IL_5TBW_042 IL_95997.1 | |
| IL_7TOR_045 | 1/A18S/922:923, 1/A18S/1019:1022 | Major groove platform; stack outside cWW Not in a motif group | geometric IL_6N5P_003 IL_50694.2 | |
| IL_7TOR_046 | 1/A18S/924:927, 1/A18S/1014:1018 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_4V88_429 IL_30621.3 | |
| IL_7TOR_047 | 1/A18S/928:931, 1/A18S/1010:1013 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_4V88_430 IL_30621.3 | |
| IL_7TOR_048 | 1/A18S/931:935, 1/A18S/1007:1010 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_4V88_431 IL_30621.3 | |
| IL_7TOR_049 | 1/A18S/942:945, 1/A18S/981:984 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_4V88_432 IL_30621.3 | |
| IL_7TOR_050 | 1/A18S/952:956, 1/A18S/967:974 | Kink-turn Not in a motif group | geometric IL_7A0S_004 IL_45067.2 | |
| IL_7TOR_051 | 1/A18S/1042:1047, 1/A18S/1071:1073 | Other IL Not in a motif group | geometric IL_4V88_435 IL_22046.1 | |
| IL_7TOR_052 | 1/A18S/1047:1051, 1/A18S/1067:1071 | tSH-tHW-tHS Not in a motif group | geometric IL_4V88_436 IL_17136.1 | |
| IL_7TOR_053 | 1/A18S/1091:1093, 1/A18S/1152:1158 | No text annotation Not in a motif group | geometric IL_4V88_437 IL_19557.3 | |
| IL_7TOR_054 | 1/A18S/1098:1101, 1/A18S/1131:1134 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_4V88_438 IL_30621.3 | |
| IL_7TOR_055 | 1/A18S/1101:1103, 1/A18S/1129:1131 | No text annotation Not in a motif group | geometric IL_1YZ9_002 IL_95997.1 | |
| IL_7TOR_056 | 1/A18S/1108:1110, 1/A18S/1123:1124 | Minor groove platform Not in a motif group | geometric IL_4V88_412 IL_93353.1 | |
| IL_7TOR_057 | 1/A18S/1168:1175, 1/A18S/1186:1191 | 8x6 Sarcin-Ricin with inserted Y; G-bulge Not in a motif group | geometric IL_4LFB_034 IL_24606.2 | |
| IL_7TOR_058 | 1/A18S/1203:1204, 1/A18S/1694:1696 | Single bulged A Not in a motif group | geometric IL_5J7L_039 IL_37497.3 | |
| IL_7TOR_059 | 1/A18S/1206:1208, 1/A18S/1691:1692 | Single bulged G Not in a motif group | geometric IL_6CZR_148 IL_00225.3 | |
| IL_7TOR_060 | 1/A18S/1214:1217, 1/A18S/1681:1685 | C-loop Not in a motif group | geometric IL_4V88_443 IL_63596.6 | |
| IL_7TOR_061 | 1/A18S/1230:1232, 1/A18S/1526:1528 | No text annotation Not in a motif group | geometric IL_4V88_444 IL_95997.1 | |
| IL_7TOR_062 | 1/A18S/1235:1236, 1/A18S/1521:1523 | Minor groove platform Not in a motif group | geometric IL_4V88_445 IL_42622.2 | |
| IL_7TOR_063 | 1/A18S/1270:1272, 1/A18S/1510:1512 | No text annotation Not in a motif group | geometric IL_4E48_005 IL_95997.1 | |
| IL_7TOR_064 | 1/A18S/1280:1287, 1/A18S/1314:1317 | No text annotation Not in a motif group | ||
| IL_7TOR_065 | 1/A18S/1287:1290, 1/A18S/1309:1314 | No text annotation Not in a motif group | ||
| IL_7TOR_066 | 1/A18S/1291:1294, 1/A18S/1305:1308 | No text annotation Not in a motif group | ||
| IL_7TOR_067 | 1/A18S/1325:1327, 1/A18S/1502:1503 | Single bulged U Not in a motif group | geometric IL_4V88_449 IL_83039.14 | |
| IL_7TOR_068 | 1/A18S/1328:1333, 1/A18S/1498:1501 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_4V88_473 IL_30621.3 | |
| IL_7TOR_069 | 1/A18S/1333:1335, 1/A18S/1492:1498 | Minor groove platform with extra cWW Not in a motif group | geometric IL_4V88_451 IL_92788.2 | |
| IL_7TOR_070 | 1/A18S/1337:1338, 1/A18S/1488:1490 | Single bulged A Not in a motif group | geometric IL_4V88_452 IL_37497.3 | |
| IL_7TOR_071 | 1/A18S/1347:1349, 1/A18S/1380:1382 | No text annotation Not in a motif group | geometric IL_7A0S_042 IL_51629.2 | |
| IL_7TOR_072 | 1/A18S/1363:1365, 1/A18S/1374:1375 | Minor groove platform Not in a motif group | geometric IL_5TBW_039 IL_42622.2 | |
| IL_7TOR_073 | 1/A18S/1395:1399, 1/A18S/1447:1450 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_5EW4_002 IL_30621.3 | |
| IL_7TOR_074 | 1/A18S/1402:1405, 1/A18S/1441:1444 | Minor groove platform Not in a motif group | geometric IL_4V88_456 IL_76458.1 | |
| IL_7TOR_075 | 1/A18S/1412:1413, 1/A18S/1427:1429 | Single bulged G Not in a motif group | geometric IL_5J7L_019 IL_00225.3 | |
| IL_7TOR_076 | 1/A18S/1537:1539, 1/A18S/1594:1596 | No text annotation Not in a motif group | geometric IL_4E48_005 IL_95997.1 | |
| IL_7TOR_077 | 1/A18S/1550:1558, 1/A18S/1577:1582 | No text annotation Not in a motif group | geometric IL_5J7L_055 IL_75461.4 | |
| IL_7TOR_078 | 1/A18S/1560:1562, 1/A18S/1573:1575 | No text annotation Not in a motif group | geometric IL_5AOX_001 IL_95997.1 | |
| IL_7TOR_079 | 1/A18S/1604:1610, 1/A18S/1629:1635 | No text annotation Not in a motif group | homologous IL_8C3A_469 IL_10092.1 | |
| IL_7TOR_080 | 1/A18S/1700:1702, 1/A18S/1833:1836 | No text annotation Not in a motif group | geometric IL_4V88_463 IL_36143.3 | |
| IL_7TOR_081 | 1/A18S/1702:1705, 1/A18S/1829:1833 | No text annotation Not in a motif group | geometric IL_4V88_464 IL_99670.1 | |
| IL_7TOR_082 | 1/A18S/1706:1708, 1/A18S/1826:1828 | No text annotation Not in a motif group | geometric IL_5VCI_002 IL_95997.1 | |
| IL_7TOR_083 | 1/A18S/1708:1711, 1/A18S/1822:1826 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_1JID_002 IL_30621.3 | |
| IL_7TOR_084 | 1/A18S/1714:1716, 1/A18S/1817:1819 | No text annotation Not in a motif group | geometric IL_4V88_419 IL_95997.1 | |
| IL_7TOR_085 | 1/A18S/1717:1720, 1/A18S/1813:1816 | Double sheared Not in a motif group | geometric IL_4V88_468 IL_09705.9 | |
| IL_7TOR_086 | 1/A18S/1720:1723, 1/A18S/1811:1813 | Isolated cWS basepair Not in a motif group | geometric IL_4TS2_003 IL_52767.2 | |
| IL_7TOR_087 | 1/A18S/1729:1731, 1/A18S/1803:1805 | No text annotation Not in a motif group | geometric IL_5TBW_016 IL_51629.2 | |
| IL_7TOR_088 | 1/A18S/1733:1736, 1/A18S/1798:1801 | Double sheared Not in a motif group | geometric IL_4V88_471 IL_09705.9 | |
| IL_7TOR_089 | 1/A18S/1739:1741, 1/A18S/1793:1795 | No text annotation Not in a motif group | geometric IL_3SZX_002 IL_95997.1 | |
| IL_7TOR_090 | 1/A18S/1742:1746, 1/A18S/1788:1792 | Triple sheared Not in a motif group | geometric IL_7RQB_075 IL_56467.8 | |
| IL_7TOR_091 | 1/A18S/1750:1751, 1/A18S/1782:1784 | No text annotation Not in a motif group | ||
| IL_7TOR_092 | 1/A18S/1751:1753, 1/A18S/1779:1782 | No text annotation Not in a motif group | ||
| IL_7TOR_093 | 1/A28S/6:7, 1/A58S/149:151 | No text annotation Not in a motif group | homologous IL_8C3A_002 IL_61258.12 | |
| IL_7TOR_094 | 1/A28S/11:14, 1/A58S/143:145 | UG cWW Not in a motif group | geometric IL_4LFB_061 IL_95997.1 | |
| IL_7TOR_095 | 1/A28S/16:18, 1/A58S/139:141 | No text annotation Not in a motif group | geometric IL_1Y27_001 IL_51629.2 | |
| IL_7TOR_096 | 1/A28S/26:27, 1/A28S/55:57 | No text annotation Not in a motif group | homologous IL_8C3A_004 IL_76488.2 | |
| IL_7TOR_097 | 1/A28S/30:37, 1/A28S/44:52 | 9x8 Sarcin-Ricin; G-bulge Not in a motif group | geometric IL_4WF9_008 IL_35728.2 | |
| IL_7TOR_098 | 1/A28S/81:88, 1/A28S/96:102 | No text annotation Not in a motif group | homologous IL_8C3A_006 IL_88613.1 | |
| IL_7TOR_099 | 1/A28S/118:121, 1/A28S/152:153 | Major groove outside cWW, minor groove, intercalation pocket Not in a motif group | geometric IL_1U9S_003 IL_69996.1 | |
| IL_7TOR_100 | 1/A28S/121:122, 1/A28S/147:152 | No text annotation Not in a motif group | homologous IL_8C3A_007 IL_19724.2 | |
| IL_7TOR_101 | 1/A28S/125:126, 1/A28S/142:144 | Single bulged C Not in a motif group | geometric IL_1DQF_001 IL_61258.12 | |
| IL_7TOR_102 | 1/A28S/168:173, 1/A28S/263:267 | No text annotation Not in a motif group | ||
| IL_7TOR_103 | 1/A28S/180:189, 1/A28S/252:256 | No text annotation Not in a motif group | ||
| IL_7TOR_104 | 1/A28S/195:196, 1/A28S/244:246 | Single bulged C Not in a motif group | geometric IL_1S03_006 IL_61258.12 | |
| IL_7TOR_105 | 1/A28S/199:201, 1/A28S/214:215 | No text annotation Not in a motif group | homologous IL_8C3A_013 IL_83039.14 | |
| IL_7TOR_106 | 1/A28S/339:342, 1/A58S/32:33 | Minor groove platform Not in a motif group | geometric IL_7RQB_073 IL_88739.1 | |
| IL_7TOR_107 | 1/A28S/348:350, 1/A58S/25:26 | No text annotation Not in a motif group | homologous IL_8C3A_014 IL_37497.3 | |
| IL_7TOR_108 | 1/A28S/387:390, 1/A28S/401:414 | No text annotation Not in a motif group | homologous IL_8C3A_015 IL_60992.6 | |
| IL_7TOR_109 | 1/A28S/415:421, 1/A58S/13:19 | No text annotation Not in a motif group | homologous IL_8C3A_016 IL_66414.6 | |
| IL_7TOR_110 | 1/A28S/443:446, 1/A28S/1300:1304 | No text annotation Not in a motif group | geometric IL_6AZ4_001 IL_69145.1 | |
| IL_7TOR_111 | 1/A28S/448:450, 1/A28S/1297:1298 | No text annotation Not in a motif group | ||
| IL_7TOR_112 | 1/A28S/459:460, 1/A28S/695:697 | No text annotation Not in a motif group | ||
| IL_7TOR_113 | 1/A28S/461:464, 1/A28S/691:694 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_4WF9_109 IL_30621.3 | |
| IL_7TOR_114 | 1/A28S/466:472, 1/A28S/682:689 | No text annotation Not in a motif group | ||
| IL_7TOR_115 | 1/A28S/481:482, 1/A28S/672:673 | Single bulged C Not in a motif group | geometric IL_4WF9_035 IL_61258.12 | |
| IL_7TOR_116 | 1/A28S/482:485, 1/A28S/671:672 | Multiple bulged bases Not in a motif group | geometric IL_6JXM_001 IL_69996.1 | |
| IL_7TOR_117 | 1/A28S/487:488, 1/A28S/665:669 | Multiple bulged bases Not in a motif group | geometric IL_1R3E_002 IL_59677.2 | |
| IL_7TOR_118 | 1/A28S/491:493, 1/A28S/661:662 | Single bulged U Not in a motif group | geometric IL_4WF9_030 IL_83039.14 | |
| IL_7TOR_119 | 1/A28S/497:499, 1/A28S/656:657 | Single bulged C Not in a motif group | geometric IL_3SNP_003 IL_61258.12 | |
| IL_7TOR_120 | 1/A28S/508:510, 1/A28S/649:650 | Single bulged A Not in a motif group | geometric IL_4V88_409 IL_37497.3 | |
| IL_7TOR_121 | 1/A28S/511:515, 1/A28S/646:648 | No text annotation Not in a motif group | ||
| IL_7TOR_122 | 1/A28S/519:521, 1/A28S/641:642 | Single stack bend Not in a motif group | geometric IL_5TBW_375 IL_76488.2 | |
| IL_7TOR_123 | 1/A28S/709:710, 1/A28S/1286:1288 | Single bulged G Not in a motif group | geometric IL_4LFB_036 IL_00225.3 | |
| IL_7TOR_124 | 1/A28S/723:724, 1/A28S/942:945 | Multiple bulged bases Not in a motif group | geometric IL_7V9E_001 IL_59677.2 | |
| IL_7TOR_125 | 1/A28S/727:731, 1/A28S/938:939 | No text annotation Not in a motif group | ||
| IL_7TOR_126 | 1/A28S/732:735, 1/A28S/928:937 | No text annotation Not in a motif group | ||
| IL_7TOR_127 | 1/A28S/737:739, 1/A28S/923:926 | No text annotation Not in a motif group | geometric IL_5J7L_341 IL_71530.2 | |
| IL_7TOR_128 | 1/A28S/745:753, 1/A28S/910:919 | No text annotation Not in a motif group | ||
| IL_7TOR_129 | 1/A28S/1077:1081, 1/A28S/1218:1234 | No text annotation Not in a motif group | ||
| IL_7TOR_130 | 1/A28S/1082:1084, 1/A28S/1213:1217 | Isolated near basepair Not in a motif group | geometric IL_7A0S_030 IL_52767.2 | |
| IL_7TOR_131 | 1/A28S/1086:1087, 1/A28S/1209:1211 | Single bulged C Not in a motif group | geometric IL_3W3S_001 IL_61258.12 | |
| IL_7TOR_132 | 1/A28S/1097:1098, 1/A28S/1197:1199 | Single stack bend Not in a motif group | geometric IL_5J7L_249 IL_76488.2 | |
| IL_7TOR_133 | 1/A28S/1099:1168, 1/A28S/1193:1196 | No text annotation Not in a motif group | ||
| IL_7TOR_134 | 1/A28S/1173:1175, 1/A28S/1186:1188 | Isolated cWH basepair Not in a motif group | geometric IL_3W3S_003 IL_51629.2 | |
| IL_7TOR_135 | 1/A28S/1357:1360, 1/A28S/1379:1382 | No text annotation Not in a motif group | ||
| IL_7TOR_136 | 1/A28S/1360:1361, 1/A28S/1376:1379 | Multiple bulged bases Not in a motif group | geometric IL_7V9E_001 IL_59677.2 | |
| IL_7TOR_137 | 1/A28S/1425:1429, 1/A28S/1455:1460 | Triple sheared related Not in a motif group | geometric IL_4V9F_018 IL_64879.2 | |
| IL_7TOR_138 | 1/A28S/1431:1434, 1/A28S/1450:1453 | Double sheared Not in a motif group | geometric IL_4LFB_060 IL_09705.9 | |
| IL_7TOR_139 | 1/A28S/1467:1468, 1/A28S/1496:1498 | No text annotation Not in a motif group | homologous IL_8C3A_026 IL_37497.3 | |
| IL_7TOR_140 | 1/A28S/1474:1476, 1/A28S/1489:1490 | Single stack bend Not in a motif group | geometric IL_5J7L_249 IL_76488.2 | |
| IL_7TOR_141 | 1/A28S/1520:1522, 1/A28S/1655:1657 | No text annotation Not in a motif group | homologous IL_8C3A_029 IL_95997.1 | |
| IL_7TOR_142 | 1/A28S/1522:1526, 1/A28S/1648:1655 | No text annotation Not in a motif group | geometric IL_5TBW_028 IL_17470.6 | |
| IL_7TOR_143 | 1/A28S/1550:1551, 1/A28S/1576:1578 | No text annotation Not in a motif group | homologous IL_8C3A_032 IL_00225.3 | |
| IL_7TOR_144 | 1/A28S/1551:1555, 1/A28S/1572:1576 | Triple sheared Not in a motif group | geometric IL_5J7L_263 IL_56467.8 | |
| IL_7TOR_145 | 1/A28S/1586:1589, 1/A28S/1605:1607 | No text annotation Not in a motif group | homologous IL_8C3A_034 IL_05564.2 | |
| IL_7TOR_146 | 1/A28S/1590:1592, 1/A28S/1603:1604 | No text annotation Not in a motif group | homologous IL_8C3A_035 IL_83039.14 | |
| IL_7TOR_147 | 1/A28S/1624:1626, 1/A28S/1636:1640 | No text annotation Not in a motif group | homologous IL_8C3A_036 IL_90991.6 | |
| IL_7TOR_148 | 1/A28S/1671:1673, 1/A28S/1682:1684 | No text annotation Not in a motif group | homologous IL_8C3A_037 IL_95997.1 | |
| IL_7TOR_149 | 1/A28S/1686:1688, 1/A28S/1848:1851 | No text annotation Not in a motif group | ||
| IL_7TOR_150 | 1/A28S/1694:1721, 1/A28S/1841:1842 | No text annotation Not in a motif group | ||
| IL_7TOR_151 | 1/A28S/1723:1725, 1/A28S/1838:1839 | No text annotation Not in a motif group | homologous IL_8C3A_040 IL_00225.3 | |
| IL_7TOR_152 | 1/A28S/1732:1737, 1/A28S/1792:1797 | 5x5 Sarcin-Ricin with intercalated A; G-bulge Not in a motif group | geometric IL_7A0S_027 IL_81631.1 | |
| IL_7TOR_153 | 1/A28S/1737:1738, 1/A28S/1790:1792 | No text annotation Not in a motif group | homologous IL_8C3A_042 IL_42622.2 | |
| IL_7TOR_154 | 1/A28S/1739:1744, 1/A28S/1786:1789 | No text annotation Not in a motif group | homologous IL_8C3A_043 IL_02509.1 | |
| IL_7TOR_155 | 1/A28S/1746:1749, 1/A28S/1781:1784 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_5TBW_041 IL_30621.3 | |
| IL_7TOR_156 | 1/A28S/1749:1751, 1/A28S/1779:1781 | No text annotation Not in a motif group | homologous IL_8C3A_045 IL_95997.1 | |
| IL_7TOR_157 | 1/A28S/1753:1756, 1/A28S/1776:1777 | Multiple bulged bases Not in a motif group | geometric IL_4YAZ_007 IL_76389.1 | |
| IL_7TOR_158 | 1/A28S/1758:1761, 1/A28S/1772:1774 | No text annotation Not in a motif group | ||
| IL_7TOR_159 | 1/A28S/1814:1816, 1/A28S/1823:1824 | No text annotation Not in a motif group | homologous IL_8C3A_048 IL_00225.3 | |
| IL_7TOR_160 | 1/A28S/1858:1860, 1/A28S/1874:1876 | No text annotation Not in a motif group | homologous IL_8C3A_049 IL_95997.1 | |
| IL_7TOR_161 | 1/A28S/1905:1909, 1/A28S/2067:2071 | No text annotation Not in a motif group | homologous IL_8C3A_051 IL_89002.2 | |
| IL_7TOR_162 | 1/A28S/1911:1918, 1/A28S/2064:2065 | No text annotation Not in a motif group | homologous IL_8C3A_052 IL_15861.7 | |
| IL_7TOR_163 | 1/A28S/1918:1920, 1/A28S/2063:2064 | No text annotation Not in a motif group | ||
| IL_7TOR_164 | 1/A28S/1920:1922, 1/A28S/2062:2063 | No text annotation Not in a motif group | ||
| IL_7TOR_165 | 1/A28S/1926:1933, 1/A28S/2053:2058 | No text annotation Not in a motif group | homologous IL_8C3A_054 IL_27086.1 | |
| IL_7TOR_166 | 1/A28S/1933:1944, 1/A28S/2038:2053 | No text annotation Not in a motif group | geometric IL_5TBW_052 IL_53762.1 | |
| IL_7TOR_167 | 1/A28S/1946:1948, 1/A28S/2035:2036 | No text annotation Not in a motif group | homologous IL_8C3A_056 IL_83039.14 | |
| IL_7TOR_168 | 1/A28S/1957:1965, 1/A28S/2022:2026 | No text annotation Not in a motif group | homologous IL_8C3A_057 IL_90538.4 | |
| IL_7TOR_169 | 1/A28S/2083:2085, 1/A28S/2272:2273 | Single bulged U Not in a motif group | geometric IL_6CZR_156 IL_83039.14 | |
| IL_7TOR_170 | 1/A28S/2290:2292, 1/A28S/2342:2345 | No text annotation Not in a motif group | homologous IL_8C3A_061 IL_52767.2 | |
| IL_7TOR_171 | 1/A28S/2299:2301, 1/A28S/2334:2335 | No text annotation Not in a motif group | homologous IL_8C3A_062 IL_37497.3 | |
| IL_7TOR_172 | 1/A28S/2302:2309, 1/A28S/2329:2333 | No text annotation Not in a motif group | homologous IL_8C3A_063 IL_70923.2 | |
| IL_7TOR_173 | 1/A28S/2312:2314, 1/A28S/2325:2326 | Single bulged A Not in a motif group | geometric IL_5J7L_302 IL_37497.3 | |
| IL_7TOR_174 | 1/A28S/2358:2364, 1/A28S/3858:3863 | No text annotation Not in a motif group | homologous IL_8C3A_065 IL_76042.2 | |
| IL_7TOR_175 | 1/A28S/2415:2419, 1/A28S/2427:2429 | C-loop Not in a motif group | geometric IL_7A0S_047 IL_37712.2 | |
| IL_7TOR_176 | 1/A28S/2446:2450, 1/A28S/2509:2514 | No text annotation Not in a motif group | homologous IL_8C3A_067 IL_89002.2 | |
| IL_7TOR_177 | 1/A28S/2454:2456, 1/A28S/2465:2471 | No text annotation Not in a motif group | ||
| IL_7TOR_178 | 1/A28S/2477:2479, 1/A28S/2499:2500 | Single stack bend Not in a motif group | geometric IL_4WF9_007 IL_76488.2 | |
| IL_7TOR_179 | 1/A28S/2542:2547, 1/A28S/2772:2774 | Isolated non-canonical cWW with bulges Not in a motif group | geometric IL_4RUM_001 IL_82068.2 | |
| IL_7TOR_180 | 1/A28S/2549:2550, 1/A28S/2768:2770 | Single bulged U Not in a motif group | geometric IL_2A64_002 IL_83039.14 | |
| IL_7TOR_181 | 1/A28S/2589:2593, 1/A28S/2752:2756 | No text annotation Not in a motif group | homologous IL_8C3A_073 IL_56467.8 | |
| IL_7TOR_182 | 1/A28S/2613:2614, 1/A28S/2724:2726 | No text annotation Not in a motif group | homologous IL_8C3A_075 IL_61258.12 | |
| IL_7TOR_183 | 1/A28S/2614:2615, 1/A28S/2722:2724 | Single stack bend Not in a motif group | geometric IL_5TBW_070 IL_76488.2 | |
| IL_7TOR_184 | 1/A28S/2646:2648, 1/A28S/2685:2688 | Isolated tHS basepair with bulges Not in a motif group | geometric IL_4V9F_076 IL_38958.7 | |
| IL_7TOR_185 | 1/A28S/2651:2653, 1/A28S/2681:2682 | No text annotation Not in a motif group | ||
| IL_7TOR_186 | 1/A28S/2656:2662, 1/A28S/2672:2678 | No text annotation Not in a motif group | homologous IL_8C3A_079 IL_60192.2 | |
| IL_7TOR_187 | 1/A28S/2704:2705, 1/A28S/2710:2712 | No text annotation Not in a motif group | ||
| IL_7TOR_188 | 1/A28S/2832:2838, 1/A28S/3850:3853 | No text annotation Not in a motif group | homologous IL_8C3A_080 IL_49460.2 | |
| IL_7TOR_189 | 1/A28S/2844:2846, 1/A28S/3842:3844 | No text annotation Not in a motif group | homologous IL_8C3A_081 IL_54997.7 | |
| IL_7TOR_190 | 1/A28S/2847:2850, 1/A28S/3840:3841 | Major groove platform; stack outside cWW Not in a motif group | geometric IL_5TBW_076 IL_50694.2 | |
| IL_7TOR_191 | 1/A28S/2850:2855, 1/A28S/3837:3840 | No text annotation Not in a motif group | homologous IL_8C3A_083 IL_82842.2 | |
| IL_7TOR_192 | 1/A28S/2867:2872, 1/A28S/2877:2883 | tSH-tSH-tHH-tHS Not in a motif group | geometric IL_4V9F_063 IL_65969.2 | |
| IL_7TOR_193 | 1/A28S/2889:2891, 1/A28S/3610:3612 | No text annotation Not in a motif group | homologous IL_8C3A_085 IL_95997.1 | |
| IL_7TOR_194 | 1/A28S/2896:2897, 1/A28S/3602:3605 | No text annotation Not in a motif group | homologous IL_8C3A_086 IL_74125.1 | |
| IL_7TOR_195 | 1/A28S/3632:3633, 1/A28S/3827:3829 | No text annotation Not in a motif group | homologous IL_8C3A_087 IL_37497.3 | |
| IL_7TOR_196 | 1/A28S/3660:3665, 1/A28S/3677:3684 | No text annotation Not in a motif group | homologous IL_8C3A_088 IL_64509.1 | |
| IL_7TOR_197 | 1/A28S/3700:3703, 1/A28S/3749:3750 | No text annotation Not in a motif group | homologous IL_8C3A_089 IL_88739.1 | |
| IL_7TOR_198 | 1/A28S/3704:3705, 1/A28S/3745:3748 | No text annotation Not in a motif group | homologous IL_8C3A_090 IL_16396.2 | |
| IL_7TOR_199 | 1/A28S/3708:3714, 1/A28S/3739:3742 | No text annotation Not in a motif group | ||
| IL_7TOR_200 | 1/A28S/3715:3721, 1/A28S/3732:3738 | No text annotation Not in a motif group | homologous IL_8C3A_093 IL_36973.6 | |
| IL_7TOR_201 | 1/A28S/3780:3781, 1/A28S/3811:3814 | Multiple bulged bases Not in a motif group | geometric IL_5TBW_089 IL_59677.2 | |
| IL_7TOR_202 | 1/A28S/3781:3792, 1/A28S/3808:3811 | No text annotation Not in a motif group | homologous IL_8C3A_095 IL_81589.2 | |
| IL_7TOR_203 | 1/A28S/3895:3898, 1/A28S/4563:4565 | No text annotation Not in a motif group | homologous IL_8C3A_096 IL_63450.2 | |
| IL_7TOR_204 | 1/A28S/3900:3902, 1/A28S/4558:4561 | No text annotation Not in a motif group | homologous IL_8C3A_097 IL_54678.5 | |
| IL_7TOR_205 | 1/A28S/3913:3915, 1/A28S/4388:4389 | No text annotation Not in a motif group | homologous IL_8C3A_098 IL_83039.14 | |
| IL_7TOR_206 | 1/A28S/3916:3917, 1/A28S/4384:4387 | No text annotation Not in a motif group | homologous IL_8C3A_099 IL_42622.2 | |
| IL_7TOR_207 | 1/A28S/3927:3929, 1/A28S/4181:4184 | No text annotation Not in a motif group | homologous IL_8C3A_100 IL_38958.7 | |
| IL_7TOR_208 | 1/A28S/3943:3952, 1/A28S/4060:4070 | No text annotation Not in a motif group | ||
| IL_7TOR_209 | 1/A28S/3954:3967, 1/A28S/4054:4058 | No text annotation Not in a motif group | ||
| IL_7TOR_210 | 1/A28S/3968:3974, 1/A28S/4037:4053 | No text annotation Not in a motif group | ||
| IL_7TOR_211 | 1/A28S/4082:4088, 1/A28S/4161:4164 | No text annotation Not in a motif group | homologous IL_8C3A_106 IL_74114.1 | |
| IL_7TOR_212 | 1/A28S/4094:4097, 1/A28S/4112:4114 | No text annotation Not in a motif group | geometric IL_4N0T_004 IL_46796.1 | |
| IL_7TOR_213 | 1/A28S/4191:4192, 1/A28S/4202:4204 | No text annotation Not in a motif group | homologous IL_8C3A_107 IL_69996.1 | |
| IL_7TOR_214 | 1/A28S/4243:4245, 1/A28S/4263:4267 | No text annotation Not in a motif group | homologous IL_8C3A_108 IL_38958.7 | |
| IL_7TOR_215 | 1/A28S/4291:4293, 1/A28S/4317:4318 | Single bulged A Not in a motif group | geometric IL_5WWT_001 IL_37497.3 | |
| IL_7TOR_216 | 1/A28S/4295:4298, 1/A28S/4312:4315 | No text annotation Not in a motif group | homologous IL_8C3A_109 IL_30621.3 | |
| IL_7TOR_217 | 1/A28S/4347:4350, 1/A28S/4364:4365 | Single stack bend Not in a motif group | geometric IL_5J7L_032 IL_76488.2 | |
| IL_7TOR_218 | 1/A28S/4400:4401, 1/A28S/4442:4444 | Major groove platform Not in a motif group | geometric IL_5TBW_102 IL_27635.2 | |
| IL_7TOR_219 | 1/A28S/4401:4403, 1/A28S/4440:4442 | No text annotation Not in a motif group | geometric IL_5TBW_103 IL_95997.1 | |
| IL_7TOR_220 | 1/A28S/4403:4405, 1/A28S/4439:4440 | Major groove platform Not in a motif group | geometric IL_7A0S_088 IL_76223.2 | |
| IL_7TOR_221 | 1/A28S/4405:4407, 1/A28S/4435:4439 | No text annotation Not in a motif group | homologous IL_8C3A_113 IL_92788.2 | |
| IL_7TOR_222 | 1/A28S/4412:4416, 1/A28S/4426:4430 | No text annotation Not in a motif group | homologous IL_8C3A_114 NA | |
| IL_7TOR_223 | 1/A28S/4453:4454, 1/A28S/4526:4528 | No text annotation Not in a motif group | homologous IL_8C3A_115 IL_76223.2 | |
| IL_7TOR_224 | 1/A28S/4456:4458, 1/A28S/4520:4524 | Isolated non-canonical cWW with bulges Not in a motif group | geometric IL_5TBW_108 IL_90933.2 | |
| IL_7TOR_225 | 1/A28S/4458:4459, 1/A28S/4517:4520 | No text annotation Not in a motif group | homologous IL_8C3A_117 IL_71530.2 | |
| IL_7TOR_226 | 1/A28S/4466:4468, 1/A28S/4489:4491 | No text annotation Not in a motif group | geometric IL_4KR9_002 IL_51629.2 | |
| IL_7TOR_227 | 1/A28S/4468:4470, 1/A28S/4485:4489 | No text annotation Not in a motif group | ||
| IL_7TOR_228 | 1/A28S/4495:4497, 1/A28S/4503:4505 | No text annotation Not in a motif group | geometric IL_5TBW_112 IL_95997.1 | |
| IL_7TOR_229 | 1/A28S/4537:4538, 1/A28S/4547:4549 | Single bulged A Not in a motif group | geometric IL_7RQB_101 IL_37497.3 | |
| IL_7TOR_230 | 1/A28S/4580:4582, 1/A28S/4721:4723 | Isolated cWH basepair Not in a motif group | geometric IL_3CZW_002 IL_51629.2 | |
| IL_7TOR_231 | 1/A28S/4582:4585, 1/A28S/4717:4721 | Double sheared Not in a motif group | geometric IL_7A0S_081 IL_09705.9 | |
| IL_7TOR_232 | 1/A28S/4590:4592, 1/A28S/4618:4620 | No text annotation Not in a motif group | homologous IL_8C3A_124 IL_95997.1 | |
| IL_7TOR_233 | 1/A28S/4596:4603, 1/A28S/4608:4614 | No text annotation Not in a motif group | homologous IL_8C3A_125 IL_04346.7 | |
| IL_7TOR_234 | 1/A28S/4624:4629, 1/A28S/4669:4673 | No text annotation Not in a motif group | ||
| IL_7TOR_235 | 1/A28S/4632:4637, 1/A28S/4662:4666 | No text annotation Not in a motif group | homologous IL_8C3A_127 IL_17136.1 | |
| IL_7TOR_236 | 1/A28S/4638:4640, 1/A28S/4659:4661 | Isolated cWH basepair Not in a motif group | geometric IL_3R1C_012 IL_51629.2 | |
| IL_7TOR_237 | 1/A28S/4641:4642, 1/A28S/4655:4658 | No text annotation Not in a motif group | homologous IL_8C3A_128 IL_71530.2 | |
| IL_7TOR_238 | 1/A28S/4680:4685, 1/A28S/4705:4710 | UAA/GAN with extra cWW Not in a motif group | geometric IL_5J7L_350 IL_49767.5 | |
| IL_7TOR_239 | 1/A28S/4739:4746, 1/A28S/4954:4960 | No text annotation Not in a motif group | ||
| IL_7TOR_240 | 1/A28S/4756:4766, 1/A28S/4868:4877 | No text annotation Not in a motif group | ||
| IL_7TOR_241 | 1/A28S/4769:4771, 1/A28S/4863:4865 | Isolated cWH basepair Not in a motif group | geometric IL_4WZM_001 IL_95997.1 | |
| IL_7TOR_242 | 1/A28S/4771:4773, 1/A28S/4862:4863 | No text annotation Not in a motif group | ||
| IL_7TOR_243 | 1/A28S/4885:4888, 1/A28S/4931:4934 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_5EW4_002 IL_30621.3 | |
| IL_7TOR_244 | 1/A28S/4890:4896, 1/A28S/4924:4929 | No text annotation Not in a motif group | ||
| IL_7TOR_245 | 1/A28S/4897:4902, 1/A28S/4919:4923 | No text annotation Not in a motif group | ||
| IL_7TOR_246 | 1/A28S/4972:4975, 1/A28S/4983:4986 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_5TBW_129 IL_30621.3 | |
| IL_7TOR_247 | 1/A28S/4992:4994, 1/A28S/5057:5059 | No text annotation Not in a motif group | geometric IL_3D0U_006 IL_95997.1 | |
| IL_7TOR_248 | 1/A28S/4996:4997, 1/A28S/5053:5055 | Single bulged C Not in a motif group | geometric IL_1KUQ_002 IL_61258.12 | |
| IL_7TOR_249 | 1/A28S/5000:5002, 1/A28S/5045:5050 | No text annotation Not in a motif group | homologous IL_8C3A_138 IL_90933.2 | |
| IL_7TOR_250 | 1/A28S/5003:5009, 1/A28S/5039:5044 | No text annotation Not in a motif group | ||
| IL_7TOR_251 | 1/A28S/5012:5014, 1/A28S/5035:5036 | No text annotation Not in a motif group | homologous IL_8C3A_140 IL_83039.14 | |
| IL_7TOR_252 | 1/A28S/5014:5017, 1/A28S/5032:5035 | tWS-tSW Not in a motif group | geometric IL_5TBW_135 IL_09705.9 | |
| IL_7TOR_253 | 1/A58S/64:66, 1/A58S/92:95 | Isolated non-canonical cWW with bulges Not in a motif group | geometric IL_5TBW_145 IL_82068.2 | |
| IL_7TOR_254 | 1/A5S/15:16, 1/A5S/62:64 | Single bulged C Not in a motif group | geometric IL_3W3S_001 IL_61258.12 | |
| IL_7TOR_255 | 1/A5S/21:27, 1/A5S/52:57 | No text annotation Not in a motif group | geometric IL_5TBW_373 IL_10207.2 | |
| IL_7TOR_256 | 1/A5S/28:29, 1/A5S/48:51 | Major groove minor groove platform; mini C-loop Not in a motif group | homologous IL_7RQB_113 IL_09061.6 | |
| IL_7TOR_257 | 1/A5S/32:36, 1/A5S/41:45 | Symmetric double minor groove platform Not in a motif group | geometric IL_7RQB_114 IL_58103.6 | |
| IL_7TOR_258 | 1/A5S/71:78, 1/A5S/98:104 | 8x7 Sarcin-Ricin; G-bulge Not in a motif group | geometric IL_7A0S_007 IL_04346.7 | |
| IL_7TOR_259 | 1/A5S/79:81, 1/A5S/95:97 | No text annotation Not in a motif group | geometric IL_4V88_470 IL_51629.2 | |
| IL_7TOR_260 | 1/A5S/82:85, 1/A5S/92:94 | No text annotation Not in a motif group | geometric IL_5TBW_378 IL_95997.1 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_7TOR_011 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J3_7TOR_001 | 1/A18S/40:41, 1/A18S/481:487, 1/A18S/512:514 | No text annotation Not in a motif group | ||
| J3_7TOR_002 | 1/A18S/682:685, 1/A18S/917:922, 1/A18S/1022:1023 | No text annotation Not in a motif group | ||
| J3_7TOR_003 | 1/A18S/816:819, 1/A18S/829:831, 1/A18S/843:848 | No text annotation Not in a motif group | ||
| J3_7TOR_004 | 1/A18S/938:941, 1/A18S/985:993, 1/A18S/1000:1004 | No text annotation Not in a motif group | ||
| J3_7TOR_005 | 1/A18S/1094:1096, 1/A18S/1136:1140, 1/A18S/1147:1151 | No text annotation Not in a motif group | ||
| J3_7TOR_006 | 1/A18S/1218:1221, 1/A18S/1645:1651, 1/A18S/1673:1680 | No text annotation Not in a motif group | homologous J3_8C3A_038 NA | |
| J3_7TOR_007 | 1/A18S/1225:1228, 1/A18S/1530:1532, 1/A18S/1638:1641 | No text annotation Not in a motif group | ||
| J3_7TOR_008 | 1/A18S/1237:1244, 1/A18S/1255:1266, 1/A18S/1516:1520 | No text annotation Not in a motif group | ||
| J3_7TOR_009 | 1/A18S/1272:1277, 1/A18S/1320:1324, 1/A18S/1504:1510 | No text annotation Not in a motif group | homologous J3_8C3A_041 NA | |
| J3_7TOR_010 | 1/A18S/1340:1345, 1/A18S/1384:1389, 1/A18S/1481:1486 | No text annotation Not in a motif group | ||
| J3_7TOR_011 | 1/A18S/1350:1351, 1/A18S/1360:1363, 1/A18S/1375:1379 | No text annotation Not in a motif group | ||
| J3_7TOR_012 | 1/A18S/1391:1395, 1/A18S/1450:1456, 1/A18S/1470:1479 | No text annotation Not in a motif group | ||
| J3_7TOR_013 | 1/A18S/1532:1536, 1/A18S/1597:1604, 1/A18S/1635:1638 | No text annotation Not in a motif group | ||
| J3_7TOR_014 | 1/A28S/112:116, 1/A28S/155:160, 1/A28S/275:278 | No text annotation Not in a motif group | ||
| J3_7TOR_015 | 1/A28S/380:387, 1/A28S/414:415, 1/A58S/19:20 | No text annotation Not in a motif group | ||
| J3_7TOR_016 | 1/A28S/1531:1537, 1/A28S/1622:1624, 1/A28S/1640:1643 | No text annotation Not in a motif group | homologous J3_8C3A_003 NA | |
| J3_7TOR_017 | 1/A28S/1545:1548, 1/A28S/1580:1584, 1/A28S/1609:1614 | No text annotation Not in a motif group | ||
| J3_7TOR_018 | 1/A28S/1726:1727, 1/A28S/1802:1806, 1/A28S/1832:1837 | No text annotation Not in a motif group | ||
| J3_7TOR_019 | 1/A28S/1969:1972, 1/A28S/1994:2001, 1/A28S/2016:2018 | No text annotation Not in a motif group | ||
| J3_7TOR_020 | 1/A28S/2393:2399, 1/A28S/2805:2807, 1/A28S/2819:2822 | No text annotation Not in a motif group | homologous J3_8C3A_006 NA | |
| J3_7TOR_021 | 1/A28S/2402:2405, 1/A28S/2785:2791, 1/A28S/2800:2802 | No text annotation Not in a motif group | homologous J3_8C3A_007 NA | |
| J3_7TOR_022 | 1/A28S/2440:2445, 1/A28S/2515:2519, 1/A28S/2536:2537 | No text annotation Not in a motif group | ||
| J3_7TOR_023 | 1/A28S/3937:3939, 1/A28S/4074:4078, 1/A28S/4168:4173 | No text annotation Not in a motif group | ||
| J3_7TOR_024 | 1/A28S/4091:4094, 1/A28S/4114:4129, 1/A28S/4155:4158 | No text annotation Not in a motif group | ||
| J3_7TOR_025 | 1/A28S/4241:4243, 1/A28S/4267:4269, 1/A28S/4278:4283 | No text annotation Not in a motif group | homologous J3_8C3A_010 NA | |
| J3_7TOR_026 | 1/A28S/4463:4466, 1/A28S/4491:4493, 1/A28S/4507:4513 | No text annotation Not in a motif group | homologous J3_8C3A_011 NA | |
| J3_7TOR_027 | 1/A28S/4970:4972, 1/A28S/4986:4991, 1/A28S/5060:5063 | No text annotation Not in a motif group | ||
| J3_7TOR_028 | 1/A58S/44:45, 1/A58S/58:64, 1/A58S/95:99 | No text annotation Not in a motif group | ||
| J3_7TOR_029 | 1/A5S/9:14, 1/A5S/65:66, 1/A5S/109:110 | No text annotation Not in a motif group | homologous J3_7RQB_015 NA |
Problematic loops
No problematic loops
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