5NGM | Motifs

101 Hairpin loops
167 Internal loops
24 Junction loops

Valid loops

#	loop id	location	annotation	motif
1	HL_5NGM_001 ➜	1/AA/58:69	NA	NA
2	HL_5NGM_002 ➜	1/AA/87:95	NA	NA
3	HL_5NGM_003 ➜	1/AA/122:127	NA	NA
4	HL_5NGM_004 ➜	1/AA/136:143	NA	NA
5	HL_5NGM_005 ➜	1/AA/159:169	NA	NA
6	HL_5NGM_006 ➜	1/AA/197:204	NA	NA
7	HL_5NGM_007 ➜	1/AA/228:233	NA	NA
8	HL_5NGM_008 ➜	1/AA/249:255	NA	NA
9	HL_5NGM_009 ➜	1/AA/283:288	NA	NA
10	HL_5NGM_010 ➜	1/AA/348:355	NA	NA
11	HL_5NGM_011 ➜	1/AA/362:366	NA	NA
12	HL_5NGM_012 ➜	1/AA/370:378	NA	NA
13	HL_5NGM_013 ➜	1/AA/426:440	NA	NA
14	HL_5NGM_014 ➜	1/AA/456:463	NA	NA
15	HL_5NGM_015 ➜	1/AA/508:513	NA	NA
16	HL_5NGM_016 ➜	1/AA/533:538	NA	NA
17	HL_5NGM_017 ➜	1/AA/587:594	NA	NA
18	HL_5NGM_018 ➜	1/AA/609:618	NA	NA
19	HL_5NGM_019 ➜	1/AA/655:661	NA	NA
20	HL_5NGM_020 ➜	1/AA/674:679	NA	NA
21	HL_5NGM_021 ➜	1/AA/686:692	NA	NA
22	HL_5NGM_022 ➜	1/AA/757:764	NA	NA
23	HL_5NGM_023 ➜	1/AA/789:798	NA	NA
24	HL_5NGM_024 ➜	1/AA/823:831	NA	NA
25	HL_5NGM_025 ➜	1/AA/871:876	NA	NA
26	HL_5NGM_027 ➜	1/AA/999:1006	NA	NA
27	HL_5NGM_028 ➜	1/AA/1022:1029	NA	NA
28	HL_5NGM_029 ➜	1/AA/1103:1123	NA	NA
29	HL_5NGM_030 ➜	1/AA/1214:1218	NA	NA
30	HL_5NGM_031 ➜	1/AA/1260:1265	NA	NA
31	HL_5NGM_032 ➜	1/AA/1318:1326	NA	NA
32	HL_5NGM_033 ➜	1/AA/1361:1367	NA	NA
33	HL_5NGM_034 ➜	1/AA/1400:1405	NA	NA
34	HL_5NGM_035 ➜	1/AA/1426:1435	NA	NA
35	HL_5NGM_036 ➜	1/AA/1535:1541	NA	NA
36	HL_5NGM_037 ➜	1/AA/1612:1615	NA	NA
37	HL_5NGM_038 ➜	1/AA/1656:1663	NA	NA
38	HL_5NGM_039 ➜	1/AA/1673:1681	NA	NA
39	HL_5NGM_040 ➜	1/AA/1735:1740	NA	NA
40	HL_5NGM_041 ➜	1/AA/1760:1769	NA	NA
41	HL_5NGM_042 ➜	1/AA/1779:1783	NA	NA
42	HL_5NGM_043 ➜	1/AA/1803:1815	NA	NA
43	HL_5NGM_044 ➜	1/AA/1833:1838	NA	NA
44	HL_5NGM_045 ➜	1/AA/1891:1905	NA	NA
45	HL_5NGM_047 ➜	1/AA/1976:1984	NA	NA
46	HL_5NGM_048 ➜	1/AA/2054:2063	NA	NA
47	HL_5NGM_049 ➜	1/AA/2169:2176	NA	NA
48	HL_5NGM_050 ➜	1/AA/2236:2242	NA	NA
49	HL_5NGM_051 ➜	1/AA/2275:2283	NA	NA
50	HL_5NGM_052 ➜	1/AA/2291:2303	NA	NA
51	HL_5NGM_054 ➜	1/AA/2351:2358	NA	NA
52	HL_5NGM_055 ➜	1/AA/2382:2389	NA	NA
53	HL_5NGM_056 ➜	1/AA/2401:2406	NA	NA
54	HL_5NGM_057 ➜	1/AA/2431:2440	NA	NA
55	HL_5NGM_058 ➜	1/AA/2498:2506	NA	NA
56	HL_5NGM_059 ➜	1/AA/2555:2562	NA	NA
57	HL_5NGM_060 ➜	1/AA/2578:2584	NA	NA
58	HL_5NGM_061 ➜	1/AA/2621:2626	NA	NA
59	HL_5NGM_062 ➜	1/AA/2685:2690	NA	NA
60	HL_5NGM_063 ➜	1/AA/2728:2733	NA	NA
61	HL_5NGM_064 ➜	1/AA/2772:2786	NA	NA
62	HL_5NGM_065 ➜	1/AA/2819:2824	NA	NA
63	HL_5NGM_066 ➜	1/AA/2839:2847	NA	NA
64	HL_5NGM_067 ➜	1/AA/2876:2881	NA	NA
65	HL_5NGM_068 ➜	1/AB/36:42	NA	NA
66	HL_5NGM_069 ➜	1/AB/83:88	NA	NA
67	HL_5NGM_070 ➜	1/Aa/13:23	NA	NA
68	HL_5NGM_071 ➜	1/Aa/72:97	NA	NA
69	HL_5NGM_072 ➜	1/Aa/158:163	NA	NA
70	HL_5NGM_073 ➜	1/Aa/190:201	NA	NA
71	HL_5NGM_074 ➜	1/Aa/216:223	NA	NA
72	HL_5NGM_075 ➜	1/Aa/267:275	NA	NA
73	HL_5NGM_076 ➜	1/Aa/304:309	NA	NA
74	HL_5NGM_077 ➜	1/Aa/328:341	NA	NA
75	HL_5NGM_078 ➜	1/Aa/350:355	NA	NA
76	HL_5NGM_079 ➜	1/Aa/386:393	NA	NA
77	HL_5NGM_080 ➜	1/Aa/427:432	NA	NA
78	HL_5NGM_081 ➜	1/Aa/470:479	NA	NA
79	HL_5NGM_082 ➜	1/Aa/530:535	NA	NA
80	HL_5NGM_083 ➜	1/Aa/625:631	NA	NA
81	HL_5NGM_084 ➜	1/Aa/697:706	NA	NA
82	HL_5NGM_085 ➜	1/Aa/734:739	NA	NA
83	HL_5NGM_086 ➜	1/Aa/794:804	NA	NA
84	HL_5NGM_087 ➜	1/Aa/848:855	NA	NA
85	HL_5NGM_088 ➜	1/Aa/871:876	NA	NA
86	HL_5NGM_089 ➜	1/Aa/906:911	NA	NA
87	HL_5NGM_090 ➜	1/Aa/972:981	NA	NA
88	HL_5NGM_091 ➜	1/Aa/1021:1026	NA	NA
89	HL_5NGM_092 ➜	1/Aa/1038:1043	NA	NA
90	HL_5NGM_093 ➜	1/Aa/1087:1092	NA	NA
91	HL_5NGM_094 ➜	1/Aa/1100:1107	NA	NA
92	HL_5NGM_095 ➜	1/Aa/1144:1151	NA	NA
93	HL_5NGM_096 ➜	1/Aa/1174:1182	NA	NA
94	HL_5NGM_097 ➜	1/Aa/1275:1280	NA	NA
95	HL_5NGM_098 ➜	1/Aa/1324:1333	NA	NA
96	HL_5NGM_099 ➜	1/Aa/1366:1376	NA	NA
97	HL_5NGM_100 ➜	1/Aa/1459:1465	NA	NA
98	HL_5NGM_101 ➜	1/Aa/1526:1531	NA	NA

Problematic loops

#	loop id	Problem	Sequence
1	HL_5NGM_026 ➜	missing nts	NA
2	HL_5NGM_046 ➜	missing nts	NA
3	HL_5NGM_053 ➜	incomplete nts	NA

Valid loops

#	loop id	location	annotation	motif
1	IL_5NGM_001 ➜	1/AA/24:30,1/AA/555:561	NA	NA
2	IL_5NGM_002 ➜	1/AA/36:37,1/AA/488:490	NA	NA
3	IL_5NGM_003 ➜	1/AA/42:44,1/AA/480:483	NA	NA
4	IL_5NGM_004 ➜	1/AA/80:85,1/AA/97:105	NA	NA
5	IL_5NGM_005 ➜	1/AA/152:153,1/AA/175:177	NA	NA
6	IL_5NGM_006 ➜	1/AA/157:159,1/AA/169:171	NA	NA
7	IL_5NGM_007 ➜	1/AA/186:187,1/AA/215:217	NA	NA
8	IL_5NGM_008 ➜	1/AA/190:197,1/AA/204:212	NA	NA
9	IL_5NGM_009 ➜	1/AA/241:248,1/AA/256:262	NA	NA
10	IL_5NGM_010 ➜	1/AA/305:306,1/AA/409:412	NA	NA
11	IL_5NGM_012 ➜	1/AA/319:327,1/AA/399:400	NA	NA
12	IL_5NGM_013 ➜	1/AA/336:338,1/AA/386:390	NA	NA
13	IL_5NGM_014 ➜	1/AA/527:530,1/AA/541:554	NA	NA
14	IL_5NGM_015 ➜	1/AA/581:584,1/AA/597:600	NA	NA
15	IL_5NGM_016 ➜	1/AA/607:609,1/AA/618:620	NA	NA
16	IL_5NGM_017 ➜	1/AA/638:640,1/AA/705:707	NA	NA
17	IL_5NGM_018 ➜	1/AA/649:653,1/AA/663:667	NA	NA
18	IL_5NGM_019 ➜	1/AA/717:719,1/AA/851:853	NA	NA
19	IL_5NGM_020 ➜	1/AA/719:723,1/AA/844:851	NA	NA
20	IL_5NGM_021 ➜	1/AA/742:743,1/AA/808:810	NA	NA
21	IL_5NGM_022 ➜	1/AA/747:748,1/AA/773:775	NA	NA
22	IL_5NGM_023 ➜	1/AA/748:752,1/AA/769:773	NA	NA
23	IL_5NGM_024 ➜	1/AA/783:785,1/AA/802:803	NA	NA
24	IL_5NGM_025 ➜	1/AA/820:822,1/AA/832:836	NA	NA
25	IL_5NGM_026 ➜	1/AA/881:883,1/AA/984:987	NA	NA
26	IL_5NGM_027 ➜	1/AA/889:893,1/AA/975:978	NA	NA
27	IL_5NGM_028 ➜	1/AA/897:898,1/AA/969:971	NA	NA
28	IL_5NGM_029 ➜	1/AA/901:907,1/AA/960:966	NA	NA
29	IL_5NGM_030 ➜	1/AA/907:908,1/AA/958:960	NA	NA
30	IL_5NGM_031 ➜	1/AA/909:913,1/AA/954:957	NA	NA
31	IL_5NGM_032 ➜	1/AA/920:924,1/AA/943:947	NA	NA
32	IL_5NGM_033 ➜	1/AA/1038:1040,1/AA/1203:1204	NA	NA
33	IL_5NGM_034 ➜	1/AA/1042:1046,1/AA/1197:1201	NA	NA
34	IL_5NGM_035 ➜	1/AA/1048:1055,1/AA/1194:1195	NA	NA
35	IL_5NGM_036 ➜	1/AA/1055:1057,1/AA/1193:1194	NA	NA
36	IL_5NGM_037 ➜	1/AA/1062:1068,1/AA/1184:1188	NA	NA
37	IL_5NGM_038 ➜	1/AA/1068:1074,1/AA/1168:1184	NA	NA
38	IL_5NGM_039 ➜	1/AA/1075:1078,1/AA/1165:1167	NA	NA
39	IL_5NGM_040 ➜	1/AA/1081:1083,1/AA/1160:1162	NA	NA
40	IL_5NGM_041 ➜	1/AA/1235:1237,1/AA/1285:1288	NA	NA
41	IL_5NGM_042 ➜	1/AA/1243:1245,1/AA/1277:1279	NA	NA
42	IL_5NGM_043 ➜	1/AA/1246:1253,1/AA/1272:1276	NA	NA
43	IL_5NGM_044 ➜	1/AA/1257:1259,1/AA/1266:1268	NA	NA
44	IL_5NGM_045 ➜	1/AA/1300:1307,1/AA/2038:2044	NA	NA
45	IL_5NGM_046 ➜	1/AA/1356:1360,1/AA/1368:1370	NA	NA
46	IL_5NGM_047 ➜	1/AA/1388:1392,1/AA/1413:1417	NA	NA
47	IL_5NGM_048 ➜	1/AA/1394:1398,1/AA/1407:1411	NA	NA
48	IL_5NGM_049 ➜	1/AA/1447:1461,1/AA/1627:1636	NA	NA
49	IL_5NGM_050 ➜	1/AA/1461:1465,1/AA/1624:1627	NA	NA
50	IL_5NGM_051 ➜	1/AA/1476:1480,1/AA/1604:1608	NA	NA
51	IL_5NGM_052 ➜	1/AA/1481:1485,1/AA/1598:1603	NA	NA
52	IL_5NGM_053 ➜	1/AA/1485:1511,1/AA/1570:1598	NA	NA
53	IL_5NGM_054 ➜	1/AA/1511:1516,1/AA/1564:1570	NA	NA
54	IL_5NGM_055 ➜	1/AA/1518:1522,1/AA/1558:1562	NA	NA
55	IL_5NGM_056 ➜	1/AA/1523:1526,1/AA/1549:1557	NA	NA
56	IL_5NGM_057 ➜	1/AA/1532:1534,1/AA/1542:1543	NA	NA
57	IL_5NGM_058 ➜	1/AA/1695:1700,1/AA/2031:2033	NA	NA
58	IL_5NGM_059 ➜	1/AA/1707:1709,1/AA/2022:2024	NA	NA
59	IL_5NGM_060 ➜	1/AA/1710:1713,1/AA/2020:2021	NA	NA
60	IL_5NGM_061 ➜	1/AA/1713:1718,1/AA/2017:2020	NA	NA
61	IL_5NGM_062 ➜	1/AA/1730:1735,1/AA/1740:1746	NA	NA
62	IL_5NGM_063 ➜	1/AA/1756:1759,1/AA/1770:1773	NA	NA
63	IL_5NGM_064 ➜	1/AA/1797:1798,1/AA/2007:2009	NA	NA
64	IL_5NGM_065 ➜	1/AA/1825:1831,1/AA/1840:1848	NA	NA
65	IL_5NGM_066 ➜	1/AA/1864:1867,1/AA/1929:1930	NA	NA
66	IL_5NGM_067 ➜	1/AA/1868:1869,1/AA/1925:1928	NA	NA
67	IL_5NGM_068 ➜	1/AA/1873:1876,1/AA/1920:1921	NA	NA
68	IL_5NGM_069 ➜	1/AA/1878:1882,1/AA/1914:1918	NA	NA
69	IL_5NGM_070 ➜	1/AA/1883:1887,1/AA/1909:1913	NA	NA
70	IL_5NGM_071 ➜	1/AA/1961:1972,1/AA/1988:1991	NA	NA
71	IL_5NGM_072 ➜	1/AA/2077:2079,1/AA/2644:2645	NA	NA
72	IL_5NGM_073 ➜	1/AA/2081:2083,1/AA/2639:2642	NA	NA
73	IL_5NGM_074 ➜	1/AA/2094:2096,1/AA/2469:2470	NA	NA
74	IL_5NGM_075 ➜	1/AA/2097:2098,1/AA/2465:2468	NA	NA
75	IL_5NGM_076 ➜	1/AA/2108:2110,1/AA/2263:2266	NA	NA
76	IL_5NGM_077 ➜	1/AA/2123:2125,1/AA/2218:2220	NA	NA
77	IL_5NGM_078 ➜	1/AA/2156:2169,1/AA/2176:2186	NA	NA
78	IL_5NGM_079 ➜	1/AA/2229:2231,1/AA/2247:2248	NA	NA
79	IL_5NGM_080 ➜	1/AA/2324:2326,1/AA/2344:2348	NA	NA
80	IL_5NGM_081 ➜	1/AA/2377:2380,1/AA/2391:2394	NA	NA
81	IL_5NGM_082 ➜	1/AA/2428:2430,1/AA/2441:2442	NA	NA
82	IL_5NGM_083 ➜	1/AA/2480:2481,1/AA/2525:2527	NA	NA
83	IL_5NGM_084 ➜	1/AA/2481:2482,1/AA/2523:2525	NA	NA
84	IL_5NGM_085 ➜	1/AA/2484:2486,1/AA/2520:2521	NA	NA
85	IL_5NGM_086 ➜	1/AA/2486:2488,1/AA/2516:2520	NA	NA
86	IL_5NGM_087 ➜	1/AA/2493:2497,1/AA/2507:2511	NA	NA
87	IL_5NGM_088 ➜	1/AA/2534:2535,1/AA/2607:2609	NA	NA
88	IL_5NGM_089 ➜	1/AA/2537:2539,1/AA/2601:2605	NA	NA
89	IL_5NGM_090 ➜	1/AA/2539:2540,1/AA/2598:2601	NA	NA
90	IL_5NGM_091 ➜	1/AA/2549:2550,1/AA/2567:2570	NA	NA
91	IL_5NGM_092 ➜	1/AA/2618:2619,1/AA/2628:2630	NA	NA
92	IL_5NGM_093 ➜	1/AA/2663:2667,1/AA/2801:2809	NA	NA
93	IL_5NGM_094 ➜	1/AA/2679:2685,1/AA/2690:2695	NA	NA
94	IL_5NGM_095 ➜	1/AA/2707:2711,1/AA/2752:2754	NA	NA
95	IL_5NGM_096 ➜	1/AA/2714:2718,1/AA/2745:2749	NA	NA
96	IL_5NGM_097 ➜	1/AA/2722:2723,1/AA/2738:2741	NA	NA
97	IL_5NGM_098 ➜	1/AA/2764:2769,1/AA/2789:2794	NA	NA
98	IL_5NGM_099 ➜	1/AA/2858:2859,1/AA/2898:2900	NA	NA
99	IL_5NGM_100 ➜	1/AA/2863:2865,1/AA/2891:2894	NA	NA
100	IL_5NGM_101 ➜	1/AA/2867:2872,1/AA/2885:2889	NA	NA
101	IL_5NGM_102 ➜	1/AB/15:16,1/AB/63:65	NA	NA
102	IL_5NGM_103 ➜	1/AB/21:27,1/AB/53:58	NA	NA
103	IL_5NGM_104 ➜	1/AB/28:29,1/AB/49:52	NA	NA
104	IL_5NGM_105 ➜	1/AB/32:36,1/AB/42:46	NA	NA
105	IL_5NGM_106 ➜	1/AB/69:77,1/AB/94:102	NA	NA
106	IL_5NGM_107 ➜	1/AB/78:80,1/AB/91:93	NA	NA
107	IL_5NGM_108 ➜	1/Aa/31:33,1/Aa/560:561	NA	NA
108	IL_5NGM_109 ➜	1/Aa/45:46,1/Aa/404:406	NA	NA
109	IL_5NGM_110 ➜	1/Aa/48:53,1/Aa/367:369	NA	NA
110	IL_5NGM_111 ➜	1/Aa/54:57,1/Aa/364:366	NA	NA
111	IL_5NGM_112 ➜	1/Aa/64:67,1/Aa/102:103	NA	NA
112	IL_5NGM_113 ➜	1/Aa/68:71,1/Aa/98:101	NA	NA
113	IL_5NGM_114 ➜	1/Aa/128:131,1/Aa/239:240	NA	NA
114	IL_5NGM_115 ➜	1/Aa/132:136,1/Aa/235:238	NA	NA
115	IL_5NGM_116 ➜	1/Aa/147:153,1/Aa/168:175	NA	NA
116	IL_5NGM_117 ➜	1/Aa/187:190,1/Aa/201:203	NA	NA
117	IL_5NGM_118 ➜	1/Aa/250:255,1/Aa/285:292	NA	NA
118	IL_5NGM_119 ➜	1/Aa/256:261,1/Aa/281:284	NA	NA
119	IL_5NGM_120 ➜	1/Aa/300:301,1/Aa/312:316	NA	NA
120	IL_5NGM_121 ➜	1/Aa/375:377,1/Aa/400:401	NA	NA
121	IL_5NGM_122 ➜	1/Aa/379:383,1/Aa/397:398	NA	NA
122	IL_5NGM_123 ➜	1/Aa/383:384,1/Aa/395:397	NA	NA
123	IL_5NGM_124 ➜	1/Aa/417:427,1/Aa/432:441	NA	NA
124	IL_5NGM_125 ➜	1/Aa/454:458,1/Aa/491:496	NA	NA
125	IL_5NGM_126 ➜	1/Aa/512:519,1/Aa/548:549	NA	NA
126	IL_5NGM_127 ➜	1/Aa/523:529,1/Aa/536:544	NA	NA
127	IL_5NGM_128 ➜	1/Aa/577:583,1/Aa/889:890	NA	NA
128	IL_5NGM_129 ➜	1/Aa/588:592,1/Aa/765:769	NA	NA
129	IL_5NGM_130 ➜	1/Aa/598:600,1/Aa/655:657	NA	NA
130	IL_5NGM_131 ➜	1/Aa/602:604,1/Aa/652:653	NA	NA
131	IL_5NGM_132 ➜	1/Aa/605:606,1/Aa/648:651	NA	NA
132	IL_5NGM_133 ➜	1/Aa/612:620,1/Aa/636:642	NA	NA
133	IL_5NGM_134 ➜	1/Aa/662:663,1/Aa/759:762	NA	NA
134	IL_5NGM_135 ➜	1/Aa/665:666,1/Aa/755:757	NA	NA
135	IL_5NGM_136 ➜	1/Aa/669:674,1/Aa/748:752	NA	NA
136	IL_5NGM_137 ➜	1/Aa/681:686,1/Aa/720:725	NA	NA
137	IL_5NGM_138 ➜	1/Aa/692:696,1/Aa/707:714	NA	NA
138	IL_5NGM_139 ➜	1/Aa/782:787,1/Aa/811:813	NA	NA
139	IL_5NGM_140 ➜	1/Aa/787:791,1/Aa/807:811	NA	NA
140	IL_5NGM_141 ➜	1/Aa/896:903,1/Aa/914:919	NA	NA
141	IL_5NGM_142 ➜	1/Aa/931:932,1/Aa/1403:1405	NA	NA
142	IL_5NGM_143 ➜	1/Aa/934:936,1/Aa/1400:1401	NA	NA
143	IL_5NGM_144 ➜	1/Aa/942:944,1/Aa/1390:1394	NA	NA
144	IL_5NGM_145 ➜	1/Aa/962:963,1/Aa/1236:1238	NA	NA
145	IL_5NGM_146 ➜	1/Aa/1002:1006,1/Aa/1055:1056	NA	NA
146	IL_5NGM_147 ➜	1/Aa/1006:1010,1/Aa/1050:1055	NA	NA
147	IL_5NGM_148 ➜	1/Aa/1059:1061,1/Aa/1218:1219	NA	NA
148	IL_5NGM_149 ➜	1/Aa/1062:1067,1/Aa/1214:1217	NA	NA
149	IL_5NGM_150 ➜	1/Aa/1068:1069,1/Aa/1209:1213	NA	NA
150	IL_5NGM_151 ➜	1/Aa/1071:1072,1/Aa/1205:1207	NA	NA
151	IL_5NGM_152 ➜	1/Aa/1072:1074,1/Aa/1203:1205	NA	NA
152	IL_5NGM_153 ➜	1/Aa/1257:1263,1/Aa/1294:1300	NA	NA
153	IL_5NGM_154 ➜	1/Aa/1265:1268,1/Aa/1287:1292	NA	NA
154	IL_5NGM_155 ➜	1/Aa/1269:1274,1/Aa/1281:1286	NA	NA
155	IL_5NGM_156 ➜	1/Aa/1313:1318,1/Aa/1339:1344	NA	NA
156	IL_5NGM_157 ➜	1/Aa/1409:1411,1/Aa/1512:1515	NA	NA
157	IL_5NGM_158 ➜	1/Aa/1411:1414,1/Aa/1508:1512	NA	NA
158	IL_5NGM_159 ➜	1/Aa/1415:1417,1/Aa/1505:1507	NA	NA
159	IL_5NGM_160 ➜	1/Aa/1417:1419,1/Aa/1502:1505	NA	NA
160	IL_5NGM_161 ➜	1/Aa/1422:1424,1/Aa/1497:1499	NA	NA
161	IL_5NGM_162 ➜	1/Aa/1426:1429,1/Aa/1492:1495	NA	NA
162	IL_5NGM_163 ➜	1/Aa/1434:1437,1/Aa/1484:1487	NA	NA
163	IL_5NGM_164 ➜	1/Aa/1440:1445,1/Aa/1477:1481	NA	NA
164	IL_5NGM_165 ➜	1/Aa/1445:1447,1/Aa/1475:1477	NA	NA
165	IL_5NGM_166 ➜	1/Aa/1450:1453,1/Aa/1470:1472	NA	NA
166	IL_5NGM_167 ➜	1/Aa/1455:1458,1/Aa/1466:1468	NA	NA

Problematic loops

#	loop id	Problem	Sequence
1	IL_5NGM_011 ➜	missing nts	NA

Valid loops

#	loop id	location	annotation	motif
1	J3_5NGM_001 ➜	1/AA/30:31,1/AA/520:527,1/AA/554:555	NA	NA
2	J3_5NGM_002 ➜	1/AA/56:57,1/AA/70:76,1/AA/109:113	NA	NA
3	J3_5NGM_003 ➜	1/AA/272:276,1/AA/295:302,1/AA/415:416	NA	NA
4	J3_5NGM_004 ➜	1/AA/728:734,1/AA/818:820,1/AA/836:839	NA	NA
5	J3_5NGM_005 ➜	1/AA/743:745,1/AA/777:781,1/AA/805:808	NA	NA
6	J3_5NGM_006 ➜	1/AA/1335:1340,1/AA/1669:1671,1/AA/1683:1686	NA	NA
7	J3_5NGM_007 ➜	1/AA/1342:1346,1/AA/1649:1655,1/AA/1664:1667	NA	NA
8	J3_5NGM_008 ➜	1/AA/2118:2120,1/AA/2223:2229,1/AA/2248:2255	NA	NA
9	J3_5NGM_009 ➜	1/AA/2322:2324,1/AA/2348:2350,1/AA/2359:2364	NA	NA
10	J3_5NGM_010 ➜	1/AA/2544:2547,1/AA/2572:2574,1/AA/2588:2594	NA	NA
11	J3_5NGM_011 ➜	1/AA/2816:2817,1/AA/2826:2831,1/AA/2909:2913	NA	NA
12	J3_5NGM_012 ➜	1/AA/2834:2835,1/AA/2851:2856,1/AA/2902:2906	NA	NA
13	J3_5NGM_013 ➜	1/AB/9:14,1/AB/66:68,1/AB/103:106	NA	NA
14	J3_5NGM_014 ➜	1/Aa/47:48,1/Aa/369:375,1/Aa/401:403	NA	NA
15	J3_5NGM_015 ➜	1/Aa/594:596,1/Aa/659:662,1/Aa/762:763	NA	NA
16	J3_5NGM_016 ➜	1/Aa/680:681,1/Aa/725:733,1/Aa/740:742	NA	NA
17	J3_5NGM_017 ➜	1/Aa/834:837,1/Aa/866:870,1/Aa/877:883	NA	NA
18	J3_5NGM_018 ➜	1/Aa/945:948,1/Aa/1354:1360,1/Aa/1382:1389	NA	NA
19	J3_5NGM_019 ➜	1/Aa/952:955,1/Aa/1245:1247,1/Aa/1347:1350	NA	NA
20	J3_5NGM_020 ➜	1/Aa/964:971,1/Aa/982:993,1/Aa/1231:1235	NA	NA
21	J3_5NGM_021 ➜	1/Aa/999:1002,1/Aa/1056:1058,1/Aa/1220:1225	NA	NA
22	J3_5NGM_022 ➜	1/Aa/1074:1079,1/Aa/1118:1124,1/Aa/1197:1203	NA	NA
23	J3_5NGM_023 ➜	1/Aa/1084:1085,1/Aa/1094:1098,1/Aa/1109:1113	NA	NA
24	J3_5NGM_024 ➜	1/Aa/1247:1251,1/Aa/1306:1313,1/Aa/1344:1347	NA	NA

Problematic loops

No problematic loops

Coloring options: Nucleotide numbers

5NGM Internal, Hairpin and 3-way Junction Loop Motifs

Valid loops

Problematic loops

Valid loops

Problematic loops

Valid loops

Problematic loops