Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
HL_6GZX_0011/A1/56:69No text annotation
Not in a motif group
HL_6GZX_0021/A1/85:95No text annotation
Not in a motif group
homologous
HL_7A0S_002
HL_05727.1
HL_6GZX_0031/A1/121:126No text annotation
Not in a motif group
homologous
HL_7A0S_003
HL_75407.1
HL_6GZX_0041/A1/136:141No text annotation
Not in a motif group
HL_6GZX_0051/A1/153:163No text annotation
Not in a motif group
HL_6GZX_0061/A1/177:199No text annotation
Not in a motif group
HL_6GZX_0071/A1/215:220No text annotation
Not in a motif group
homologous
HL_7A0S_007
HL_02862.2
HL_6GZX_0081/A1/236:242No text annotation
Not in a motif group
geometric
HL_3IGI_004
HL_30784.2
HL_6GZX_0091/A1/269:277No text annotation
Not in a motif group
HL_6GZX_0101/A1/329:338No text annotation
Not in a motif group
HL_6GZX_0111/A1/344:348No text annotation
Not in a motif group
homologous
HL_4WF9_011
HL_75407.1
HL_6GZX_0121/A1/352:360No text annotation
Not in a motif group
homologous
HL_7A0S_012
HL_08002.8
HL_6GZX_0131/A1/407:423No text annotation
Not in a motif group
HL_6GZX_0141/A1/438:445No text annotation
Not in a motif group
homologous
HL_7RQB_014
HL_96598.1
HL_6GZX_0151/A1/489:496No text annotation
Not in a motif group
HL_6GZX_0161/A1/515:520No text annotation
Not in a motif group
homologous
HL_5J7L_148
HL_42097.1
HL_6GZX_0171/A1/569:576No text annotation
Not in a motif group
HL_6GZX_0181/A1/629:651No text annotation
Not in a motif group
HL_6GZX_0191/A1/656:662No text annotation
Not in a motif group
geometric
HL_4LFB_002
HL_30784.2
HL_6GZX_0201/A1/667:675No text annotation
Not in a motif group
HL_6GZX_0211/A1/761:768No text annotation
Not in a motif group
homologous
HL_5J7L_154
HL_84085.2
HL_6GZX_0221/A1/793:802No text annotation
Not in a motif group
homologous
HL_7RQB_023
HL_39334.6
HL_6GZX_0231/A1/875:880No text annotation
Not in a motif group
homologous
HL_7A0S_024
HL_64365.1
HL_6GZX_0241/A1/931:941No text annotation
Not in a motif group
HL_6GZX_0251/A1/1002:1009No text annotation
Not in a motif group
homologous
HL_7A0S_026
HL_42097.1
HL_6GZX_0261/A1/1101:1154No text annotation
Not in a motif group
HL_6GZX_0271/A1/1219:1225No text annotation
Not in a motif group
HL_6GZX_0281/A1/1270:1275No text annotation
Not in a motif group
homologous
HL_7RQB_032
HL_42097.1
HL_6GZX_0291/A1/1327:1339No text annotation
Not in a motif group
HL_6GZX_0301/A1/1366:1382No text annotation
Not in a motif group
HL_6GZX_0311/A1/1400:1428No text annotation
Not in a motif group
HL_6GZX_0321/A1/1437:1446No text annotation
Not in a motif group
homologous
HL_7RQB_036
HL_69023.2
HL_6GZX_0331/A1/1501:1508No text annotation
Not in a motif group
HL_6GZX_0341/A1/1537:1548No text annotation
Not in a motif group
HL_6GZX_0351/A1/1581:1586No text annotation
Not in a motif group
HL_6GZX_0361/A1/1659:1668No text annotation
Not in a motif group
HL_6GZX_0371/A1/1678:1685No text annotation
Not in a motif group
HL_6GZX_0381/A1/1735:1751No text annotation
Not in a motif group
HL_6GZX_0391/A1/1763:1777No text annotation
Not in a motif group
HL_6GZX_0401/A1/1809:1821No text annotation
Not in a motif group
homologous
HL_7A0S_045
HL_43667.1
HL_6GZX_0411/A1/1839:1844No text annotation
Not in a motif group
homologous
HL_4WF9_044
NA
HL_6GZX_0421/A1/1884:1915No text annotation
Not in a motif group
HL_6GZX_0431/A1/1934:1944No text annotation
Not in a motif group
geometric
HL_5TBW_049
HL_71924.2
HL_6GZX_0441/A1/1973:1981No text annotation
Not in a motif group
homologous
HL_4WF9_046
HL_51824.1
HL_6GZX_0451/A1/2050:2061No text annotation
Not in a motif group
HL_6GZX_0461/A1/2122:2215No text annotation
Not in a motif group
HL_6GZX_0471/A1/2225:2236No text annotation
Not in a motif group
HL_6GZX_0481/A1/2261:2271No text annotation
Not in a motif group
HL_6GZX_0491/A1/2278:2290No text annotation
Not in a motif group
HL_6GZX_0501/A1/2315:2329No text annotation
Not in a motif group
HL_6GZX_0511/A1/2338:2345No text annotation
Not in a motif group
homologous
HL_7RQB_056
HL_12078.2
HL_6GZX_0521/A1/2369:2376No text annotation
Not in a motif group
HL_6GZX_0531/A1/2386:2395No text annotation
Not in a motif group
HL_6GZX_0541/A1/2417:2428No text annotation
Not in a motif group
HL_6GZX_0551/A1/2480:2498No text annotation
Not in a motif group
HL_6GZX_0561/A1/2538:2553No text annotation
Not in a motif group
HL_6GZX_0571/A1/2565:2571No text annotation
Not in a motif group
homologous
HL_4WF9_058
HL_43656.2
HL_6GZX_0581/A1/2608:2613GNRA
Not in a motif group
homologous
HL_5J7L_196
HL_42097.1
HL_6GZX_0591/A1/2666:2682No text annotation
Not in a motif group
HL_6GZX_0601/A1/2713:2722No text annotation
Not in a motif group
HL_6GZX_0611/A1/2760:2774No text annotation
Not in a motif group
geometric
HL_7RQB_066
HL_56677.7
HL_6GZX_0621/A1/2807:2817No text annotation
Not in a motif group
HL_6GZX_0631/A1/2830:2840No text annotation
Not in a motif group
HL_6GZX_0641/A1/2868:2873Other HL
Not in a motif group
homologous
HL_4WF9_065
HL_42097.1
HL_6GZX_0651/A2/56:69No text annotation
Not in a motif group
HL_6GZX_0661/A2/85:95No text annotation
Not in a motif group
homologous
HL_7A0S_002
HL_05727.1
HL_6GZX_0671/A2/121:126No text annotation
Not in a motif group
homologous
HL_7RQB_003
HL_75407.1
HL_6GZX_0681/A2/136:141No text annotation
Not in a motif group
HL_6GZX_0691/A2/155:161No text annotation
Not in a motif group
HL_6GZX_0701/A2/177:199No text annotation
Not in a motif group
HL_6GZX_0711/A2/215:220No text annotation
Not in a motif group
homologous
HL_7A0S_007
HL_02862.2
HL_6GZX_0721/A2/236:242No text annotation
Not in a motif group
geometric
HL_3IGI_004
HL_30784.2
HL_6GZX_0731/A2/269:277No text annotation
Not in a motif group
HL_6GZX_0741/A2/329:338No text annotation
Not in a motif group
HL_6GZX_0751/A2/344:348No text annotation
Not in a motif group
homologous
HL_4WF9_011
HL_75407.1
HL_6GZX_0761/A2/352:360No text annotation
Not in a motif group
homologous
HL_4WF9_012
HL_08002.8
HL_6GZX_0771/A2/406:424No text annotation
Not in a motif group
HL_6GZX_0781/A2/437:446No text annotation
Not in a motif group
HL_6GZX_0791/A2/490:495GNRA
Not in a motif group
homologous
HL_4WF9_015
HL_42097.1
HL_6GZX_0801/A2/515:520No text annotation
Not in a motif group
homologous
HL_5J7L_148
HL_42097.1
HL_6GZX_0811/A2/569:576No text annotation
Not in a motif group
HL_6GZX_0821/A2/635:645No text annotation
Not in a motif group
HL_6GZX_0831/A2/656:661GNRA
Not in a motif group
homologous
HL_4WF9_020
HL_42097.1
HL_6GZX_0841/A2/667:675No text annotation
Not in a motif group
HL_6GZX_0851/A2/761:768No text annotation
Not in a motif group
homologous
HL_5J7L_154
HL_84085.2
HL_6GZX_0861/A2/793:802No text annotation
Not in a motif group
homologous
HL_4WF9_023
HL_39334.6
HL_6GZX_0871/A2/828:834No text annotation
Not in a motif group
homologous
HL_7A0S_023
HL_27930.1
HL_6GZX_0881/A2/874:881No text annotation
Not in a motif group
geometric
HL_361D_002
HL_90617.2
HL_6GZX_0891/A2/924:950No text annotation
Not in a motif group
HL_6GZX_0901/A2/1002:1009No text annotation
Not in a motif group
homologous
HL_7A0S_026
HL_42097.1
HL_6GZX_0911/A2/1026:1033No text annotation
Not in a motif group
homologous
HL_7RQB_028
HL_64430.2
HL_6GZX_0921/A2/1139:1148No text annotation
Not in a motif group
geometric
HL_5NFV_001
HL_76539.2
HL_6GZX_0931/A2/1212:1232No text annotation
Not in a motif group
HL_6GZX_0941/A2/1270:1275No text annotation
Not in a motif group
homologous
HL_7RQB_032
HL_42097.1
HL_6GZX_0951/A2/1325:1341No text annotation
Not in a motif group
HL_6GZX_0961/A2/1367:1381No text annotation
Not in a motif group
HL_6GZX_0971/A2/1411:1416No text annotation
Not in a motif group
homologous
HL_7A0S_034
HL_16173.1
HL_6GZX_0981/A2/1437:1446No text annotation
Not in a motif group
HL_6GZX_0991/A2/1499:1511No text annotation
Not in a motif group
HL_6GZX_1001/A2/1536:1550No text annotation
Not in a motif group
HL_6GZX_1011/A2/1579:1588No text annotation
Not in a motif group
HL_6GZX_1021/A2/1614:1617No text annotation
Not in a motif group
homologous
HL_7A0S_039
HL_38927.2
HL_6GZX_1031/A2/1678:1685No text annotation
Not in a motif group
HL_6GZX_1041/A2/1740:1745UNCG
Not in a motif group
geometric
HL_5ML7_002
HL_03562.2
HL_6GZX_1051/A2/1765:1775No text annotation
Not in a motif group
HL_6GZX_1061/A2/1785:1789No text annotation
Not in a motif group
homologous
HL_7RQB_044
HL_76539.2
HL_6GZX_1071/A2/1809:1821No text annotation
Not in a motif group
homologous
HL_7A0S_045
HL_43667.1
HL_6GZX_1081/A2/1830:1855No text annotation
Not in a motif group
HL_6GZX_1091/A2/1896:1903No text annotation
Not in a motif group
HL_6GZX_1101/A2/1934:1944No text annotation
Not in a motif group
geometric
HL_5TBW_049
HL_71924.2
HL_6GZX_1111/A2/1973:1981No text annotation
Not in a motif group
homologous
HL_4WF9_046
HL_51824.1
HL_6GZX_1121/A2/2050:2061No text annotation
Not in a motif group
HL_6GZX_1131/A2/2121:2216No text annotation
Not in a motif group
HL_6GZX_1141/A2/2225:2236No text annotation
Not in a motif group
HL_6GZX_1151/A2/2261:2271No text annotation
Not in a motif group
HL_6GZX_1161/A2/2278:2290No text annotation
Not in a motif group
homologous
HL_4WF9_050
HL_19870.6
HL_6GZX_1171/A2/2315:2329No text annotation
Not in a motif group
HL_6GZX_1181/A2/2338:2345No text annotation
Not in a motif group
homologous
HL_7RQB_056
HL_12078.2
HL_6GZX_1191/A2/2367:2378No text annotation
Not in a motif group
HL_6GZX_1201/A2/2388:2393GNRA
Not in a motif group
homologous
HL_5J7L_191
HL_42097.1
HL_6GZX_1211/A2/2414:2430No text annotation
Not in a motif group
HL_6GZX_1221/A2/2484:2494No text annotation
Not in a motif group
HL_6GZX_1231/A2/2539:2552No text annotation
Not in a motif group
HL_6GZX_1241/A2/2565:2571No text annotation
Not in a motif group
homologous
HL_5J7L_195
NA
HL_6GZX_1251/A2/2608:2613No text annotation
Not in a motif group
homologous
HL_7A0S_062
HL_42097.1
HL_6GZX_1261/A2/2666:2682No text annotation
Not in a motif group
HL_6GZX_1271/A2/2713:2722No text annotation
Not in a motif group
HL_6GZX_1281/A2/2751:2783No text annotation
Not in a motif group
HL_6GZX_1291/A2/2807:2817No text annotation
Not in a motif group
HL_6GZX_1301/A2/2829:2841No text annotation
Not in a motif group
HL_6GZX_1311/A2/2868:2874No text annotation
Not in a motif group
HL_6GZX_1321/A3/11:23No text annotation
Not in a motif group
homologous
HL_5J7L_001
HL_89881.2
HL_6GZX_1331/A3/66:96No text annotation
Not in a motif group
HL_6GZX_1341/A3/152:157GNRA
Not in a motif group
homologous
HL_5J7L_003
HL_42097.1
HL_6GZX_1351/A3/185:192No text annotation
Not in a motif group
homologous
HL_4LFB_004
HL_10278.1
HL_6GZX_1361/A3/205:213No text annotation
Not in a motif group
HL_6GZX_1371/A3/254:262No text annotation
Not in a motif group
homologous
HL_5J7L_006
HL_69023.2
HL_6GZX_1381/A3/290:297No text annotation
Not in a motif group
HL_6GZX_1391/A3/314:329No text annotation
Not in a motif group
HL_6GZX_1401/A3/337:342UNCG
Not in a motif group
homologous
HL_4LFB_009
HL_03562.2
HL_6GZX_1411/A3/374:379GNRA
Not in a motif group
homologous
HL_4LFB_010
HL_42097.1
HL_6GZX_1421/A3/413:420No text annotation
Not in a motif group
HL_6GZX_1431/A3/452:458No text annotation
Not in a motif group
geometric
HL_5TBW_044
HL_09829.1
HL_6GZX_1441/A3/505:510No text annotation
Not in a motif group
geometric
HL_5U3G_001
HL_87030.2
HL_6GZX_1451/A3/600:606No text annotation
Not in a motif group
homologous
HL_5J7L_014
HL_26881.1
HL_6GZX_1461/A3/672:681No text annotation
Not in a motif group
HL_6GZX_1471/A3/709:714Other HL
Not in a motif group
homologous
HL_4LFB_016
HL_87030.2
HL_6GZX_1481/A3/769:779No text annotation
Not in a motif group
HL_6GZX_1491/A3/821:825No text annotation
Not in a motif group
homologous
HL_6CZR_089
HL_53837.1
HL_6GZX_1501/A3/839:844GNRA
Not in a motif group
geometric
HL_3NVI_002
HL_42097.1
HL_6GZX_1511/A3/873:880T-loop with 1 bulged base
Not in a motif group
geometric
HL_5TBW_005
HL_89380.2
HL_6GZX_1521/A3/939:950No text annotation
Not in a motif group
HL_6GZX_1531/A3/988:997No text annotation
Not in a motif group
HL_6GZX_1541/A3/1058:1063GNRA
Not in a motif group
homologous
HL_4LFB_024
HL_42097.1
HL_6GZX_1551/A3/1070:1079No text annotation
Not in a motif group
HL_6GZX_1561/A3/1102:1135No text annotation
Not in a motif group
HL_6GZX_1571/A3/1243:1254No text annotation
Not in a motif group
HL_6GZX_1581/A3/1292:1307No text annotation
Not in a motif group
HL_6GZX_1591/A3/1336:1349No text annotation
Not in a motif group
HL_6GZX_1601/A3/1429:1434No text annotation
Not in a motif group
geometric
HL_7RQB_011
HL_75407.1
HL_6GZX_1611/A3/1492:1497No text annotation
Not in a motif group
homologous
HL_4LFB_032
NA
HL_6GZX_1621/A4/11:23No text annotation
Not in a motif group
HL_6GZX_1631/A4/67:95No text annotation
Not in a motif group
HL_6GZX_1641/A4/150:159No text annotation
Not in a motif group
HL_6GZX_1651/A4/180:197No text annotation
Not in a motif group
HL_6GZX_1661/A4/205:213No text annotation
Not in a motif group
HL_6GZX_1671/A4/254:262No text annotation
Not in a motif group
homologous
HL_5J7L_006
HL_69023.2
HL_6GZX_1681/A4/290:297T-loop with 1 bulged base
Not in a motif group
geometric
HL_4V9F_010
HL_89380.2
HL_6GZX_1691/A4/337:342No text annotation
Not in a motif group
homologous
HL_6CZR_080
HL_03562.2
HL_6GZX_1701/A4/372:381No text annotation
Not in a motif group
HL_6GZX_1711/A4/413:420No text annotation
Not in a motif group
HL_6GZX_1721/A4/449:461No text annotation
Not in a motif group
HL_6GZX_1731/A4/505:510No text annotation
Not in a motif group
geometric
HL_5U3G_001
HL_87030.2
HL_6GZX_1741/A4/600:606No text annotation
Not in a motif group
homologous
HL_5J7L_014
HL_26881.1
HL_6GZX_1751/A4/666:690No text annotation
Not in a motif group
HL_6GZX_1761/A4/708:715No text annotation
Not in a motif group
geometric
HL_7A0S_056
HL_84085.2
HL_6GZX_1771/A4/768:780No text annotation
Not in a motif group
HL_6GZX_1781/A4/821:825No text annotation
Not in a motif group
HL_6GZX_1791/A4/839:844GNRA
Not in a motif group
geometric
HL_3NVI_002
HL_42097.1
HL_6GZX_1801/A4/874:879GNRA
Not in a motif group
homologous
HL_6CZR_091
HL_42097.1
HL_6GZX_1811/A4/939:950No text annotation
Not in a motif group
HL_6GZX_1821/A4/986:999No text annotation
Not in a motif group
HL_6GZX_1831/A4/1058:1063GNRA
Not in a motif group
homologous
HL_5J7L_023
HL_42097.1
HL_6GZX_1841/A4/1071:1078No text annotation
Not in a motif group
homologous
HL_6CZR_096
HL_71554.2
HL_6GZX_1851/A4/1102:1135No text annotation
Not in a motif group
HL_6GZX_1861/A4/1145:1154No text annotation
Not in a motif group
HL_6GZX_1871/A4/1234:1265No text annotation
Not in a motif group
HL_6GZX_1881/A4/1295:1304No text annotation
Not in a motif group
homologous
HL_5J7L_028
HL_89380.2
HL_6GZX_1891/A4/1336:1349No text annotation
Not in a motif group
HL_6GZX_1901/A4/1429:1434No text annotation
Not in a motif group
geometric
HL_4O26_001
HL_56691.2
HL_6GZX_1911/A4/1492:1497No text annotation
Not in a motif group
homologous
HL_6CZR_103
NA
HL_6GZX_1921/B1/21:67No text annotation
Not in a motif group
HL_6GZX_1931/B1/88:93No text annotation
Not in a motif group
homologous
HL_7A0S_070
HL_42097.1
HL_6GZX_1941/B2/40:46No text annotation
Not in a motif group
homologous
HL_4V9F_071
HL_87939.1
HL_6GZX_1951/B2/88:93No text annotation
Not in a motif group
homologous
HL_7A0S_070
HL_42097.1

Problematic loops

No problematic loops

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
IL_6GZX_0011/A1/79:84,
1/A1/96:104
No text annotation
Not in a motif group
geometric
IL_6CZR_143
IL_37722.1
IL_6GZX_0021/A1/229:236,
1/A1/242:248
No text annotation
Not in a motif group
IL_6GZX_0031/A1/318:320,
1/A1/368:372
No text annotation
Not in a motif group
homologous
IL_7RQB_013
IL_69440.1
IL_6GZX_0041/A1/721:727,
1/A1/848:857
No text annotation
Not in a motif group
IL_6GZX_0051/A1/729:731,
1/A1/845:846
Single stack bend
Not in a motif group
geometric
IL_5J7L_032
IL_76488.2
IL_6GZX_0061/A1/749:756,
1/A1/773:781
No text annotation
Not in a motif group
IL_6GZX_0071/A1/787:791,
1/A1/805:807
No text annotation
Not in a motif group
IL_6GZX_0081/A1/791:792,
1/A1/803:805
Single stack bend
Not in a motif group
geometric
IL_7RQB_058
IL_76488.2
IL_6GZX_0091/A1/886:890,
1/A1/984:989
No text annotation
Not in a motif group
IL_6GZX_0101/A1/893:899,
1/A1/975:981
No text annotation
Not in a motif group
IL_6GZX_0111/A1/907:911,
1/A1/963:967
5x5 Sarcin-Ricin with intercalated A; G-bulge
Not in a motif group
geometric
IL_4V9F_033
IL_38862.1
IL_6GZX_0121/A1/911:913,
1/A1/960:963
No text annotation
Not in a motif group
IL_6GZX_0131/A1/913:918,
1/A1/956:960
No text annotation
Not in a motif group
IL_6GZX_0141/A1/923:931,
1/A1/941:951
No text annotation
Not in a motif group
IL_6GZX_0151/A1/999:1001,
1/A1/1011:1012
Single stack bend
Not in a motif group
geometric
IL_4WF9_007
IL_76488.2
IL_6GZX_0161/A1/1001:1002,
1/A1/1009:1011
Single base bend
Not in a motif group
geometric
IL_5IBB_340
IL_92001.1
IL_6GZX_0171/A1/1041:1044,
1/A1/1207:1209
No text annotation
Not in a motif group
geometric
IL_3RG5_002
IL_95997.1
IL_6GZX_0181/A1/1046:1059,
1/A1/1198:1205
No text annotation
Not in a motif group
IL_6GZX_0191/A1/1059:1061,
1/A1/1197:1198
No text annotation
Not in a motif group
IL_6GZX_0201/A1/1061:1072,
1/A1/1187:1197
No text annotation
Not in a motif group
IL_6GZX_0211/A1/1072:1082,
1/A1/1169:1187
No text annotation
Not in a motif group
IL_6GZX_0221/A1/1089:1101,
1/A1/1154:1162
No text annotation
Not in a motif group
IL_6GZX_0231/A1/1243:1248,
1/A1/1293:1298
No text annotation
Not in a motif group
IL_6GZX_0241/A1/1248:1253,
1/A1/1288:1293
No text annotation
Not in a motif group
IL_6GZX_0251/A1/1255:1262,
1/A1/1282:1286
Kink-turn
Not in a motif group
homologous
IL_7A0S_043
IL_70923.2
IL_6GZX_0261/A1/1266:1268,
1/A1/1277:1278
Single bulged A
Not in a motif group
homologous
IL_7RQB_048
IL_37497.2
IL_6GZX_0271/A1/1398:1400,
1/A1/1428:1429
Single stack bend
Not in a motif group
geometric
IL_7A0S_054
IL_76488.2
IL_6GZX_0281/A1/1460:1469,
1/A1/1626:1638
No text annotation
Not in a motif group
IL_6GZX_0291/A1/1481:1488,
1/A1/1600:1609
No text annotation
Not in a motif group
IL_6GZX_0301/A1/1489:1491,
1/A1/1598:1599
Single stack bend
Not in a motif group
geometric
IL_7KGA_003
IL_76488.2
IL_6GZX_0311/A1/1491:1492,
1/A1/1596:1598
Single base bend
Not in a motif group
geometric
IL_5IBB_340
IL_92001.1
IL_6GZX_0321/A1/1495:1501,
1/A1/1508:1514
No text annotation
Not in a motif group
IL_6GZX_0331/A1/1700:1705,
1/A1/2028:2030
No text annotation
Not in a motif group
homologous
IL_5J7L_304
IL_12566.2
IL_6GZX_0341/A1/1712:1715,
1/A1/2018:2021
No text annotation
Not in a motif group
IL_6GZX_0351/A1/1715:1723,
1/A1/2014:2018
No text annotation
Not in a motif group
IL_6GZX_0361/A1/1868:1873,
1/A1/1926:1929
No text annotation
Not in a motif group
IL_6GZX_0371/A1/1873:1875,
1/A1/1922:1926
No text annotation
Not in a motif group
IL_6GZX_0381/A1/1878:1882,
1/A1/1917:1919
No text annotation
Not in a motif group
IL_6GZX_0391/A1/1957:1958,
1/A1/1988:1991
No text annotation
Not in a motif group
geometric
IL_4WF9_076
IL_59677.2
IL_6GZX_0401/A1/1958:1969,
1/A1/1985:1988
No text annotation
Not in a motif group
homologous
IL_4WF9_077
IL_81589.2
IL_6GZX_0411/A1/2074:2076,
1/A1/2631:2632
Major groove platform
Not in a motif group
homologous
IL_5J7L_320
IL_27635.1
IL_6GZX_0421/A1/2091:2093,
1/A1/2456:2457
Single bulged U
Not in a motif group
homologous
IL_7RQB_080
IL_83039.13
IL_6GZX_0431/A1/2094:2095,
1/A1/2452:2455
Minor groove platform
Not in a motif group
homologous
IL_7RQB_081
IL_42622.2
IL_6GZX_0441/A1/2105:2109,
1/A1/2248:2253
No text annotation
Not in a motif group
IL_6GZX_0451/A1/2109:2112,
1/A1/2245:2248
Tandem non-canonical cWW pairs
Not in a motif group
geometric
IL_5C5W_003
IL_30621.2
IL_6GZX_0461/A1/2307:2309,
1/A1/2351:2354
No text annotation
Not in a motif group
geometric
IL_4N0T_004
IL_46796.1
IL_6GZX_0471/A1/2363:2369,
1/A1/2376:2382
No text annotation
Not in a motif group
IL_6GZX_0481/A1/2414:2417,
1/A1/2428:2430
Isolated cWH basepair
Not in a motif group
geometric
IL_406D_002
IL_51629.2
IL_6GZX_0491/A1/2471:2473,
1/A1/2507:2508
Major groove platform
Not in a motif group
geometric
IL_1S03_004
IL_27635.1
IL_6GZX_0501/A1/2473:2475,
1/A1/2503:2507
Major groove minor groove platform with extra cWW
Not in a motif group
homologous
IL_5J7L_337
IL_92788.2
IL_6GZX_0511/A1/2521:2523,
1/A1/2593:2596
No text annotation
Not in a motif group
geometric
IL_6DME_003
IL_63450.2
IL_6GZX_0521/A1/2523:2528,
1/A1/2584:2593
No text annotation
Not in a motif group
IL_6GZX_0531/A1/2535:2538,
1/A1/2553:2558
No text annotation
Not in a motif group
IL_6GZX_0541/A1/2605:2606,
1/A1/2615:2617
Single bulged A
Not in a motif group
homologous
IL_7RQB_101
IL_37497.2
IL_6GZX_0551/A1/2648:2654,
1/A1/2789:2799
No text annotation
Not in a motif group
IL_6GZX_0561/A1/2694:2698,
1/A1/2740:2742
C-loop
Not in a motif group
homologous
IL_7RQB_104
IL_63596.6
IL_6GZX_0571/A1/2700:2706,
1/A1/2732:2738
No text annotation
Not in a motif group
IL_6GZX_0581/A1/2709:2713,
1/A1/2722:2729
No text annotation
Not in a motif group
IL_6GZX_0591/A1/2752:2760,
1/A1/2774:2782
No text annotation
Not in a motif group
IL_6GZX_0601/A1/2849:2852,
1/A1/2889:2893
Major groove platform with intercalation
Not in a motif group
geometric
IL_7A0S_102
IL_58502.1
IL_6GZX_0611/A2/35:38,
1/A2/469:473
Tandem non-canonical cWW pairs
Not in a motif group
geometric
IL_4V88_429
IL_30621.2
IL_6GZX_0621/A2/39:44,
1/A2/462:468
No text annotation
Not in a motif group
IL_6GZX_0631/A2/79:84,
1/A2/96:104
No text annotation
Not in a motif group
geometric
IL_6CZR_143
IL_37722.1
IL_6GZX_0641/A2/229:236,
1/A2/242:248
No text annotation
Not in a motif group
IL_6GZX_0651/A2/316:322,
1/A2/366:374
No text annotation
Not in a motif group
IL_6GZX_0661/A2/405:406,
1/A2/424:426
Single stack bend
Not in a motif group
geometric
IL_5J7L_032
IL_76488.2
IL_6GZX_0671/A2/630:635,
1/A2/645:650
No text annotation
Not in a motif group
IL_6GZX_0681/A2/721:727,
1/A2/848:857
No text annotation
Not in a motif group
IL_6GZX_0691/A2/729:731,
1/A2/845:846
Single stack bend
Not in a motif group
geometric
IL_5J7L_032
IL_76488.2
IL_6GZX_0701/A2/746:747,
1/A2/812:814
Single bulged A
Not in a motif group
homologous
IL_5J7L_261
IL_37497.2
IL_6GZX_0711/A2/749:756,
1/A2/773:781
No text annotation
Not in a motif group
IL_6GZX_0721/A2/787:792,
1/A2/803:807
No text annotation
Not in a motif group
IL_6GZX_0731/A2/893:901,
1/A2/973:981
No text annotation
Not in a motif group
IL_6GZX_0741/A2/907:911,
1/A2/963:967
5x5 Sarcin-Ricin with intercalated A; G-bulge
Not in a motif group
geometric
IL_4V9F_033
IL_38862.1
IL_6GZX_0751/A2/911:918,
1/A2/956:963
No text annotation
Not in a motif group
IL_6GZX_0761/A2/999:1001,
1/A2/1011:1012
Single stack bend
Not in a motif group
geometric
IL_4WF9_007
IL_76488.2
IL_6GZX_0771/A2/1001:1002,
1/A2/1009:1011
Single stack bend
Not in a motif group
geometric
IL_4WF9_007
IL_76488.2
IL_6GZX_0781/A2/1041:1046,
1/A2/1205:1209
Other IL
Not in a motif group
geometric
IL_4WF9_084
IL_05145.2
IL_6GZX_0791/A2/1046:1051,
1/A2/1200:1205
No text annotation
Not in a motif group
IL_6GZX_0801/A2/1052:1054,
1/A2/1184:1199
No text annotation
Not in a motif group
IL_6GZX_0811/A2/1091:1101,
1/A2/1154:1160
No text annotation
Not in a motif group
IL_6GZX_0821/A2/1101:1139,
1/A2/1148:1154
No text annotation
Not in a motif group
IL_6GZX_0831/A2/1243:1248,
1/A2/1293:1298
No text annotation
Not in a motif group
IL_6GZX_0841/A2/1248:1253,
1/A2/1288:1293
No text annotation
Not in a motif group
IL_6GZX_0851/A2/1255:1262,
1/A2/1282:1286
Kink-turn
Not in a motif group
homologous
IL_7A0S_043
IL_70923.2
IL_6GZX_0861/A2/1265:1268,
1/A2/1277:1279
Isolated cWS basepair
Not in a motif group
geometric
IL_5TBW_047
IL_52767.2
IL_6GZX_0871/A2/1354:1357,
1/A2/1653:1670
No text annotation
Not in a motif group
IL_6GZX_0881/A2/1400:1403,
1/A2/1424:1428
No text annotation
Not in a motif group
IL_6GZX_0891/A2/1405:1409,
1/A2/1418:1422
tSH-tHW-tHS
Not in a motif group
homologous
IL_7RQB_053
IL_17136.1
IL_6GZX_0901/A2/1460:1469,
1/A2/1626:1638
No text annotation
Not in a motif group
IL_6GZX_0911/A2/1479:1483,
1/A2/1606:1611
No text annotation
Not in a motif group
IL_6GZX_0921/A2/1483:1488,
1/A2/1600:1606
No text annotation
Not in a motif group
IL_6GZX_0931/A2/1495:1499,
1/A2/1511:1514
No text annotation
Not in a motif group
IL_6GZX_0941/A2/1527:1529,
1/A2/1562:1563
No text annotation
Not in a motif group
IL_6GZX_0951/A2/1529:1532,
1/A2/1554:1562
No text annotation
Not in a motif group
IL_6GZX_0961/A2/1532:1533,
1/A2/1552:1554
Single stack bend
Not in a motif group
geometric
IL_7A0S_054
IL_76488.2
IL_6GZX_0971/A2/1534:1536,
1/A2/1550:1551
No text annotation
Not in a motif group
IL_6GZX_0981/A2/1574:1579,
1/A2/1588:1595
No text annotation
Not in a motif group
IL_6GZX_0991/A2/1700:1706,
1/A2/2027:2030
No text annotation
Not in a motif group
geometric
IL_5TBW_074
IL_49460.2
IL_6GZX_1001/A2/1712:1715,
1/A2/2018:2021
No text annotation
Not in a motif group
IL_6GZX_1011/A2/1715:1723,
1/A2/2014:2018
No text annotation
Not in a motif group
IL_6GZX_1021/A2/1735:1740,
1/A2/1745:1751
tSH-tSH-tHH-tHS
Not in a motif group
homologous
IL_7A0S_063
IL_65969.2
IL_6GZX_1031/A2/1870:1873,
1/A2/1926:1927
Major groove outside cWW, minor groove, intercalation pocket
Not in a motif group
homologous
IL_5J7L_314
IL_88739.1
IL_6GZX_1041/A2/1874:1875,
1/A2/1922:1925
Major groove outside cWW, minor groove, intercalation pocket
Not in a motif group
homologous
IL_5J7L_315
IL_16396.2
IL_6GZX_1051/A2/1878:1883,
1/A2/1916:1919
No text annotation
Not in a motif group
IL_6GZX_1061/A2/1884:1888,
1/A2/1911:1915
No text annotation
Not in a motif group
IL_6GZX_1071/A2/1888:1893,
1/A2/1906:1911
No text annotation
Not in a motif group
IL_6GZX_1081/A2/1957:1958,
1/A2/1988:1991
Multiple bulged bases
Not in a motif group
homologous
IL_5J7L_318
IL_59677.2
IL_6GZX_1091/A2/1958:1969,
1/A2/1985:1988
No text annotation
Not in a motif group
geometric
IL_4WF9_077
IL_81589.2
IL_6GZX_1101/A2/2074:2076,
1/A2/2631:2632
Major groove platform
Not in a motif group
homologous
IL_5J7L_320
IL_27635.1
IL_6GZX_1111/A2/2077:2081,
1/A2/2625:2630
No text annotation
Not in a motif group
IL_6GZX_1121/A2/2091:2093,
1/A2/2456:2457
Single bulged U
Not in a motif group
homologous
IL_7RQB_080
IL_83039.13
IL_6GZX_1131/A2/2094:2095,
1/A2/2452:2455
Minor groove platform
Not in a motif group
homologous
IL_7RQB_081
IL_42622.2
IL_6GZX_1141/A2/2105:2109,
1/A2/2248:2253
No text annotation
Not in a motif group
IL_6GZX_1151/A2/2109:2112,
1/A2/2246:2248
No text annotation
Not in a motif group
IL_6GZX_1161/A2/2112:2113,
1/A2/2244:2246
Single stack bend
Not in a motif group
geometric
IL_5J7L_032
IL_76488.2
IL_6GZX_1171/A2/2364:2367,
1/A2/2378:2381
Double sheared
Not in a motif group
homologous
IL_5J7L_333
IL_09705.9
IL_6GZX_1181/A2/2467:2469,
1/A2/2510:2514
No text annotation
Not in a motif group
IL_6GZX_1191/A2/2469:2473,
1/A2/2507:2510
No text annotation
Not in a motif group
geometric
IL_1J2B_001
IL_58686.2
IL_6GZX_1201/A2/2473:2475,
1/A2/2503:2507
No text annotation
Not in a motif group
geometric
IL_3OXE_002
IL_18471.2
IL_6GZX_1211/A2/2480:2484,
1/A2/2494:2498
Triple sheared
Not in a motif group
geometric
IL_7RQB_095
IL_56467.8
IL_6GZX_1221/A2/2521:2523,
1/A2/2593:2596
No text annotation
Not in a motif group
geometric
IL_6DME_003
IL_63450.2
IL_6GZX_1231/A2/2523:2528,
1/A2/2584:2593
No text annotation
Not in a motif group
IL_6GZX_1241/A2/2535:2537,
1/A2/2554:2558
No text annotation
Not in a motif group
IL_6GZX_1251/A2/2605:2606,
1/A2/2615:2617
Single bulged A
Not in a motif group
homologous
IL_7RQB_101
IL_37497.2
IL_6GZX_1261/A2/2640:2654,
1/A2/2789:2792
No text annotation
Not in a motif group
IL_6GZX_1271/A2/2694:2698,
1/A2/2740:2742
Major groove minor groove platform with tHH
Not in a motif group
geometric
IL_4WF9_050
IL_37712.2
IL_6GZX_1281/A2/2698:2705,
1/A2/2733:2740
No text annotation
Not in a motif group
IL_6GZX_1291/A2/2709:2713,
1/A2/2722:2729
No text annotation
Not in a motif group
IL_6GZX_1301/A2/2849:2852,
1/A2/2889:2893
No text annotation
Not in a motif group
IL_6GZX_1311/A2/2866:2868,
1/A2/2874:2875
Single stack bend
Not in a motif group
geometric
IL_4C7O_002
IL_76488.2
IL_6GZX_1321/A3/29:33,
1/A3/534:537
Tandem non-canonical cWW pairs
Not in a motif group
geometric
IL_6CZR_168
IL_67743.1
IL_6GZX_1331/A3/44:45,
1/A3/391:393
Single bulged A
Not in a motif group
geometric
IL_4LFB_002
IL_37497.2
IL_6GZX_1341/A3/53:58,
1/A3/349:353
No text annotation
Not in a motif group
IL_6GZX_1351/A3/63:66,
1/A3/96:97
Multiple bulged bases
Not in a motif group
geometric
IL_5J7L_005
IL_76389.1
IL_6GZX_1361/A3/120:125,
1/A3/226:229
Tandem non-canonical cWW pairs
Not in a motif group
geometric
IL_3WBM_002
IL_30621.2
IL_6GZX_1371/A3/142:150,
1/A3/159:168
No text annotation
Not in a motif group
IL_6GZX_1381/A3/180:182,
1/A3/195:197
No text annotation
Not in a motif group
homologous
IL_4LFB_010
IL_95997.1
IL_6GZX_1391/A3/285:290,
1/A3/297:305
No text annotation
Not in a motif group
IL_6GZX_1401/A3/362:372,
1/A3/381:388
No text annotation
Not in a motif group
IL_6GZX_1411/A3/402:412,
1/A3/421:430
No text annotation
Not in a motif group
IL_6GZX_1421/A3/485:494,
1/A3/523:526
No text annotation
Not in a motif group
IL_6GZX_1431/A3/498:504,
1/A3/511:519
No text annotation
Not in a motif group
IL_6GZX_1441/A3/563:569,
1/A3/738:744
No text annotation
Not in a motif group
IL_6GZX_1451/A3/573:580,
1/A3/626:632
No text annotation
Not in a motif group
IL_6GZX_1461/A3/580:584,
1/A3/620:626
No text annotation
Not in a motif group
IL_6GZX_1471/A3/588:595,
1/A3/611:616
No text annotation
Not in a motif group
IL_6GZX_1481/A3/651:652,
1/A3/720:722
Single stack bend
Not in a motif group
geometric
IL_5TBW_070
IL_76488.2
IL_6GZX_1491/A3/666:672,
1/A3/681:690
No text annotation
Not in a motif group
IL_6GZX_1501/A3/757:761,
1/A3/787:788
Left turn
Not in a motif group
homologous
IL_4LFB_032
IL_29346.1
IL_6GZX_1511/A3/761:768,
1/A3/780:787
No text annotation
Not in a motif group
IL_6GZX_1521/A3/929:931,
1/A3/1209:1210
Single stack bend
Not in a motif group
geometric
IL_7KGA_003
IL_76488.2
IL_6GZX_1531/A3/984:988,
1/A3/997:1000
No text annotation
Not in a motif group
IL_6GZX_1541/A3/1033:1039,
1/A3/1184:1188
No text annotation
Not in a motif group
IL_6GZX_1551/A3/1039:1042,
1/A3/1178:1184
No text annotation
Not in a motif group
IL_6GZX_1561/A3/1042:1043,
1/A3/1176:1178
No text annotation
Not in a motif group
IL_6GZX_1571/A3/1236:1239,
1/A3/1258:1263
No text annotation
Not in a motif group
IL_6GZX_1581/A3/1239:1243,
1/A3/1254:1258
No text annotation
Not in a motif group
IL_6GZX_1591/A3/1381:1383,
1/A3/1478:1481
No text annotation
Not in a motif group
IL_6GZX_1601/A3/1383:1386,
1/A3/1474:1478
No text annotation
Not in a motif group
geometric
IL_4V88_464
IL_99670.1
IL_6GZX_1611/A3/1386:1391,
1/A3/1468:1474
No text annotation
Not in a motif group
IL_6GZX_1621/A3/1394:1398,
1/A3/1461:1465
No text annotation
Not in a motif group
IL_6GZX_1631/A3/1398:1406,
1/A3/1453:1461
No text annotation
Not in a motif group
IL_6GZX_1641/A3/1406:1408,
1/A3/1452:1453
Single stack bend
Not in a motif group
geometric
IL_5TBW_004
IL_76488.2
IL_6GZX_1651/A3/1408:1412,
1/A3/1447:1452
No text annotation
Not in a motif group
IL_6GZX_1661/A3/1413:1419,
1/A3/1441:1446
No text annotation
Not in a motif group
IL_6GZX_1671/A3/1421:1427,
1/A3/1436:1439
No text annotation
Not in a motif group
IL_6GZX_1681/A4/28:33,
1/A4/534:538
No text annotation
Not in a motif group
geometric
IL_5TBW_121
IL_05145.2
IL_6GZX_1691/A4/44:45,
1/A4/391:393
Single bulged A
Not in a motif group
homologous
IL_6CZR_114
IL_37497.2
IL_6GZX_1701/A4/53:58,
1/A4/349:353
No text annotation
Not in a motif group
IL_6GZX_1711/A4/63:66,
1/A4/96:97
Multiple bulged bases
Not in a motif group
homologous
IL_4LFB_005
IL_76389.1
IL_6GZX_1721/A4/122:125,
1/A4/226:227
Multiple bulged bases
Not in a motif group
homologous
IL_6CZR_119
IL_16396.2
IL_6GZX_1731/A4/138:142,
1/A4/168:171
No text annotation
Not in a motif group
IL_6GZX_1741/A4/142:150,
1/A4/159:168
No text annotation
Not in a motif group
IL_6GZX_1751/A4/284:288,
1/A4/299:306
No text annotation
Not in a motif group
IL_6GZX_1761/A4/440:444,
1/A4/467:472
6x5 Sarcin-Ricin; G-bulge
Not in a motif group
homologous
IL_6CZR_130
IL_88269.3
IL_6GZX_1771/A4/444:449,
1/A4/461:467
No text annotation
Not in a motif group
geometric
IL_4LFB_019
IL_11882.1
IL_6GZX_1781/A4/485:494,
1/A4/523:526
No text annotation
Not in a motif group
IL_6GZX_1791/A4/497:504,
1/A4/511:520
No text annotation
Not in a motif group
IL_6GZX_1801/A4/563:568,
1/A4/739:744
No text annotation
Not in a motif group
IL_6GZX_1811/A4/573:580,
1/A4/626:632
No text annotation
Not in a motif group
IL_6GZX_1821/A4/580:582,
1/A4/622:626
No text annotation
Not in a motif group
IL_6GZX_1831/A4/757:761,
1/A4/787:788
Left turn
Not in a motif group
homologous
IL_4LFB_032
IL_29346.1
IL_6GZX_1841/A4/762:768,
1/A4/780:786
No text annotation
Not in a motif group
IL_6GZX_1851/A4/862:872,
1/A4/881:889
No text annotation
Not in a motif group
IL_6GZX_1861/A4/924:928,
1/A4/1211:1216
No text annotation
Not in a motif group
IL_6GZX_1871/A4/1033:1043,
1/A4/1176:1188
No text annotation
Not in a motif group
IL_6GZX_1881/A4/1140:1145,
1/A4/1154:1162
No text annotation
Not in a motif group
IL_6GZX_1891/A4/1381:1386,
1/A4/1474:1481
No text annotation
Not in a motif group
IL_6GZX_1901/A4/1386:1391,
1/A4/1468:1474
No text annotation
Not in a motif group
IL_6GZX_1911/A4/1394:1398,
1/A4/1461:1465
No text annotation
Not in a motif group
IL_6GZX_1921/A4/1398:1405,
1/A4/1454:1461
No text annotation
Not in a motif group
IL_6GZX_1931/A4/1406:1408,
1/A4/1452:1453
Single stack bend
Not in a motif group
geometric
IL_5TBW_004
IL_76488.2
IL_6GZX_1941/A4/1408:1413,
1/A4/1446:1452
No text annotation
Not in a motif group
IL_6GZX_1951/A4/1413:1419,
1/A4/1441:1446
No text annotation
Not in a motif group
IL_6GZX_1961/A4/1421:1427,
1/A4/1436:1439
No text annotation
Not in a motif group
IL_6GZX_1971/B2/36:40,
1/B2/46:50
Symmetric double minor groove platform
Not in a motif group
geometric
IL_7RQB_114
IL_58103.6
IL_6GZX_1981/B2/81:86,
1/B2/95:100
No text annotation
Not in a motif group

Problematic loops

No problematic loops

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
J3_6GZX_0011/A1/53:56,
1/A1/69:75,
1/A1/108:114
No text annotation
Not in a motif group
J3_6GZX_0021/A1/288:291,
1/A1/396:403,
1/A1/427:432
No text annotation
Not in a motif group
J3_6GZX_0031/A1/746:749,
1/A1/781:787,
1/A1/807:814
No text annotation
Not in a motif group
J3_6GZX_0041/A1/1345:1352,
1/A1/1672:1677,
1/A1/1686:1692
No text annotation
Not in a motif group
J3_6GZX_0051/A1/1354:1357,
1/A1/1653:1659,
1/A1/1668:1670
No text annotation
Not in a motif group
J3_6GZX_0061/A1/2115:2118,
1/A1/2219:2224,
1/A1/2237:2242
No text annotation
Not in a motif group
J3_6GZX_0071/A1/2531:2534,
1/A1/2559:2561,
1/A1/2575:2581
No text annotation
Not in a motif group
homologous
J3_4WF9_009
NA
J3_6GZX_0081/A2/731:740,
1/A2/820:828,
1/A2/834:845
No text annotation
Not in a motif group
J3_6GZX_0091/A2/747:749,
1/A2/781:787,
1/A2/807:812
No text annotation
Not in a motif group
J3_6GZX_0101/A2/1345:1351,
1/A2/1673:1678,
1/A2/1685:1692
No text annotation
Not in a motif group
J3_6GZX_0111/A2/2115:2118,
1/A2/2219:2224,
1/A2/2237:2242
No text annotation
Not in a motif group
J3_6GZX_0121/A2/2531:2534,
1/A2/2559:2561,
1/A2/2575:2581
No text annotation
Not in a motif group
homologous
J3_7RQB_012
NA
J3_6GZX_0131/A2/2803:2806,
1/A2/2818:2823,
1/A2/2901:2905
No text annotation
Not in a motif group
homologous
J3_7A0S_012
NA
J3_6GZX_0141/A3/45:53,
1/A3/353:362,
1/A3/388:391
No text annotation
Not in a motif group
J3_6GZX_0151/A3/569:572,
1/A3/633:637,
1/A3/737:738
No text annotation
Not in a motif group
J3_6GZX_0161/A3/809:812,
1/A3/834:839,
1/A3/844:851
No text annotation
Not in a motif group
J3_6GZX_0171/A3/1055:1056,
1/A3/1065:1069,
1/A3/1080:1084
No text annotation
Not in a motif group
homologous
J3_5J7L_009
NA
J3_6GZX_0181/A4/569:572,
1/A4/633:637,
1/A4/737:738
No text annotation
Not in a motif group
J3_6GZX_0191/A4/809:812,
1/A4/834:839,
1/A4/844:851
No text annotation
Not in a motif group
J3_6GZX_0201/A4/918:924,
1/A4/1216:1218,
1/A4/1318:1323
No text annotation
Not in a motif group
J3_6GZX_0211/A4/1055:1056,
1/A4/1065:1069,
1/A4/1080:1084
No text annotation
Not in a motif group
homologous
J3_5J7L_009
NA

Problematic loops

No problematic loops


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