7RR5 | Motifs

120 Hairpin loops
235 Internal loops
30 Junction loops

Valid loops

#	loop id	location	annotation	motif
1	HL_7RR5_001 ➜	1/A/13:22	NA	NA
2	HL_7RR5_002 ➜	1/A/31:39	NA	NA
3	HL_7RR5_003 ➜	1/A/53:61	NA	NA
4	HL_7RR5_004 ➜	1/C1/38:45	NA	NA
5	HL_7RR5_005 ➜	1/C1/69:74	NA	NA
6	HL_7RR5_006 ➜	1/C1/90:96	NA	NA
7	HL_7RR5_007 ➜	1/C1/132:136	NA	NA
8	HL_7RR5_008 ➜	1/C1/194:201	NA	NA
9	HL_7RR5_009 ➜	1/C1/208:212	NA	NA
10	HL_7RR5_010 ➜	1/C1/216:224	NA	NA
11	HL_7RR5_011 ➜	1/C1/278:287	NA	NA
12	HL_7RR5_012 ➜	1/C1/303:312	NA	NA
13	HL_7RR5_013 ➜	1/C1/357:362	NA	NA
14	HL_7RR5_014 ➜	1/C1/382:387	NA	NA
15	HL_7RR5_015 ➜	1/C1/543:548	NA	NA
16	HL_7RR5_016 ➜	1/C1/599:604	NA	NA
17	HL_7RR5_017 ➜	1/C1/640:649	NA	NA
18	HL_7RR5_018 ➜	1/C1/686:694	NA	NA
19	HL_7RR5_019 ➜	1/C1/707:712	NA	NA
20	HL_7RR5_020 ➜	1/C1/732:737	NA	NA
21	HL_7RR5_021 ➜	1/C1/763:768	NA	NA
22	HL_7RR5_022 ➜	1/C1/844:849	NA	NA
23	HL_7RR5_023 ➜	1/C1/876:885	NA	NA
24	HL_7RR5_024 ➜	1/C1/910:918	NA	NA
25	HL_7RR5_025 ➜	1/C1/958:963	NA	NA
26	HL_7RR5_026 ➜	1/C1/1023:1029	NA	NA
27	HL_7RR5_027 ➜	1/C1/1076:1083	NA	NA
28	HL_7RR5_028 ➜	1/C1/1126:1132	NA	NA
29	HL_7RR5_029 ➜	1/C1/1148:1155	NA	NA
30	HL_7RR5_030 ➜	1/C1/1239:1249	NA	NA
31	HL_7RR5_031 ➜	1/C1/1267:1274	NA	NA
32	HL_7RR5_033 ➜	1/C1/1403:1408	NA	NA
33	HL_7RR5_034 ➜	1/C1/1462:1470	NA	NA
34	HL_7RR5_035 ➜	1/C1/1506:1512	NA	NA
35	HL_7RR5_036 ➜	1/C1/1544:1549	NA	NA
36	HL_7RR5_038 ➜	1/C1/1599:1608	NA	NA
37	HL_7RR5_039 ➜	1/C1/1634:1639	NA	NA
38	HL_7RR5_040 ➜	1/C1/1680:1688	NA	NA
39	HL_7RR5_041 ➜	1/C1/1719:1725	NA	NA
40	HL_7RR5_042 ➜	1/C1/1759:1766	NA	NA
41	HL_7RR5_043 ➜	1/C1/1792:1796	NA	NA
42	HL_7RR5_044 ➜	1/C1/1844:1851	NA	NA
43	HL_7RR5_045 ➜	1/C1/1862:1868	NA	NA
44	HL_7RR5_046 ➜	1/C1/1923:1928	NA	NA
45	HL_7RR5_048 ➜	1/C1/2110:2114	NA	NA
46	HL_7RR5_049 ➜	1/C1/2135:2145	NA	NA
47	HL_7RR5_050 ➜	1/C1/2164:2170	NA	NA
48	HL_7RR5_051 ➜	1/C1/2220:2225	NA	NA
49	HL_7RR5_052 ➜	1/C1/2253:2263	NA	NA
50	HL_7RR5_053 ➜	1/C1/2292:2300	NA	NA
51	HL_7RR5_054 ➜	1/C1/2369:2378	NA	NA
52	HL_7RR5_056 ➜	1/C1/2535:2544	NA	NA
53	HL_7RR5_057 ➜	1/C1/2568:2573	NA	NA
54	HL_7RR5_058 ➜	1/C1/2616:2624	NA	NA
55	HL_7RR5_059 ➜	1/C1/2633:2645	NA	NA
56	HL_7RR5_060 ➜	1/C1/2673:2681	NA	NA
57	HL_7RR5_061 ➜	1/C1/2693:2700	NA	NA
58	HL_7RR5_062 ➜	1/C1/2724:2732	NA	NA
59	HL_7RR5_063 ➜	1/C1/2744:2749	NA	NA
60	HL_7RR5_064 ➜	1/C1/2776:2784	NA	NA
61	HL_7RR5_065 ➜	1/C1/2840:2848	NA	NA
62	HL_7RR5_066 ➜	1/C1/2897:2904	NA	NA
63	HL_7RR5_067 ➜	1/C1/2920:2926	NA	NA
64	HL_7RR5_068 ➜	1/C1/2963:2968	NA	NA
65	HL_7RR5_069 ➜	1/C1/3025:3030	NA	NA
66	HL_7RR5_070 ➜	1/C1/3068:3073	NA	NA
67	HL_7RR5_071 ➜	1/C1/3110:3124	NA	NA
68	HL_7RR5_072 ➜	1/C1/3194:3197	NA	NA
69	HL_7RR5_073 ➜	1/C1/3240:3247	NA	NA
70	HL_7RR5_074 ➜	1/C1/3303:3311	NA	NA
71	HL_7RR5_075 ➜	1/C1/3350:3353	NA	NA
72	HL_7RR5_076 ➜	1/C2/7:17	NA	NA
73	HL_7RR5_078 ➜	1/C2/154:160	NA	NA
74	HL_7RR5_079 ➜	1/C2/190:195	NA	NA
75	HL_7RR5_080 ➜	1/C2/228:237	NA	NA
76	HL_7RR5_081 ➜	1/C2/243:250	NA	NA
77	HL_7RR5_082 ➜	1/C2/276:279	NA	NA
78	HL_7RR5_083 ➜	1/C2/330:338	NA	NA
79	HL_7RR5_084 ➜	1/C2/368:373	NA	NA
80	HL_7RR5_085 ➜	1/C2/393:404	NA	NA
81	HL_7RR5_086 ➜	1/C2/414:419	NA	NA
82	HL_7RR5_087 ➜	1/C2/450:456	NA	NA
83	HL_7RR5_089 ➜	1/C2/520:532	NA	NA
84	HL_7RR5_090 ➜	1/C2/569:574	NA	NA
85	HL_7RR5_093 ➜	1/C2/764:772	NA	NA
86	HL_7RR5_094 ➜	1/C2/777:783	NA	NA
87	HL_7RR5_095 ➜	1/C2/829:843	NA	NA
88	HL_7RR5_096 ➜	1/C2/900:909	NA	NA
89	HL_7RR5_097 ➜	1/C2/937:942	NA	NA
90	HL_7RR5_098 ➜	1/C2/997:1007	NA	NA
91	HL_7RR5_099 ➜	1/C2/1055:1064	NA	NA
92	HL_7RR5_100 ➜	1/C2/1084:1089	NA	NA
93	HL_7RR5_101 ➜	1/C2/1121:1126	NA	NA
94	HL_7RR5_102 ➜	1/C2/1188:1197	NA	NA
95	HL_7RR5_103 ➜	1/C2/1238:1247	NA	NA
96	HL_7RR5_104 ➜	1/C2/1296:1301	NA	NA
97	HL_7RR5_105 ➜	1/C2/1309:1316	NA	NA
98	HL_7RR5_106 ➜	1/C2/1359:1364	NA	NA
99	HL_7RR5_107 ➜	1/C2/1396:1402	NA	NA
100	HL_7RR5_108 ➜	1/C2/1501:1506	NA	NA
101	HL_7RR5_109 ➜	1/C2/1550:1561	NA	NA
102	HL_7RR5_110 ➜	1/C2/1594:1602	NA	NA
103	HL_7RR5_112 ➜	1/C2/1778:1783	NA	NA
104	HL_7RR5_113 ➜	1/C3/69:89	NA	NA
105	HL_7RR5_114 ➜	1/C3/108:114	NA	NA
106	HL_7RR5_115 ➜	1/C3/124:129	NA	NA
107	HL_7RR5_116 ➜	1/C4/36:41	NA	NA
108	HL_7RR5_117 ➜	1/C4/88:93	NA	NA
109	HL_7RR5_118 ➜	1/P/12:23	NA	NA
110	HL_7RR5_119 ➜	1/P/31:39	NA	NA
111	HL_7RR5_120 ➜	1/P/53:61	NA	NA

Problematic loops

#	loop id	Problem	Sequence
1	HL_7RR5_032 ➜	missing nts	NA
2	HL_7RR5_037 ➜	missing nts	NA
3	HL_7RR5_047 ➜	missing nts	NA
4	HL_7RR5_055 ➜	missing nts	NA
5	HL_7RR5_077 ➜	missing nts	NA
6	HL_7RR5_088 ➜	missing nts	NA
7	HL_7RR5_091 ➜	missing nts	NA
8	HL_7RR5_092 ➜	missing nts	NA
9	HL_7RR5_111 ➜	missing nts	NA

Valid loops

#	loop id	location	annotation	motif
1	IL_7RR5_001 ➜	1/C1/3:4,1/C3/155:156	NA	NA
2	IL_7RR5_002 ➜	1/C1/7:8,1/C3/150:152	NA	NA
3	IL_7RR5_003 ➜	1/C1/12:15,1/C3/144:146	NA	NA
4	IL_7RR5_004 ➜	1/C1/27:28,1/C1/56:58	NA	NA
5	IL_7RR5_005 ➜	1/C1/31:38,1/C1/45:53	NA	NA
6	IL_7RR5_006 ➜	1/C1/82:89,1/C1/97:103	NA	NA
7	IL_7RR5_007 ➜	1/C1/123:124,1/C1/144:149	NA	NA
8	IL_7RR5_008 ➜	1/C1/125:127,1/C1/141:143	NA	NA
9	IL_7RR5_009 ➜	1/C1/163:165,1/C1/257:258	NA	NA
10	IL_7RR5_010 ➜	1/C1/169:170,1/C1/248:253	NA	NA
11	IL_7RR5_011 ➜	1/C1/177:178,1/C1/238:241	NA	NA
12	IL_7RR5_012 ➜	1/C1/189:191,1/C1/204:205	NA	NA
13	IL_7RR5_013 ➜	1/C1/337:339,1/C3/25:26	NA	NA
14	IL_7RR5_014 ➜	1/C1/376:379,1/C1/390:403	NA	NA
15	IL_7RR5_015 ➜	1/C1/404:410,1/C3/13:19	NA	NA
16	IL_7RR5_016 ➜	1/C1/429:431,1/C1/628:630	NA	NA
17	IL_7RR5_018 ➜	1/C1/512:513,1/C1/577:579	NA	NA
18	IL_7RR5_019 ➜	1/C1/517:525,1/C1/567:573	NA	NA
19	IL_7RR5_020 ➜	1/C1/531:538,1/C1/553:561	NA	NA
20	IL_7RR5_021 ➜	1/C1/668:670,1/C1/792:794	NA	NA
21	IL_7RR5_022 ➜	1/C1/680:684,1/C1/696:700	NA	NA
22	IL_7RR5_023 ➜	1/C1/725:728,1/C1/741:745	NA	NA
23	IL_7RR5_024 ➜	1/C1/752:753,1/C1/779:781	NA	NA
24	IL_7RR5_025 ➜	1/C1/755:756,1/C1/775:777	NA	NA
25	IL_7RR5_026 ➜	1/C1/758:763,1/C1/768:773	NA	NA
26	IL_7RR5_027 ➜	1/C1/803:805,1/C1/938:940	NA	NA
27	IL_7RR5_028 ➜	1/C1/805:809,1/C1/931:938	NA	NA
28	IL_7RR5_029 ➜	1/C1/833:834,1/C1/859:861	NA	NA
29	IL_7RR5_030 ➜	1/C1/834:838,1/C1/855:859	NA	NA
30	IL_7RR5_031 ➜	1/C1/869:872,1/C1/888:890	NA	NA
31	IL_7RR5_032 ➜	1/C1/873:875,1/C1/886:887	NA	NA
32	IL_7RR5_033 ➜	1/C1/907:909,1/C1/919:923	NA	NA
33	IL_7RR5_034 ➜	1/C1/954:956,1/C1/965:967	NA	NA
34	IL_7RR5_035 ➜	1/C1/969:970,1/C1/1111:1113	NA	NA
35	IL_7RR5_036 ➜	1/C1/977:982,1/C1/1101:1104	NA	NA
36	IL_7RR5_037 ➜	1/C1/983:985,1/C1/1099:1100	NA	NA
37	IL_7RR5_038 ➜	1/C1/991:997,1/C1/1052:1058	NA	NA
38	IL_7RR5_039 ➜	1/C1/997:998,1/C1/1050:1052	NA	NA
39	IL_7RR5_040 ➜	1/C1/999:1004,1/C1/1046:1049	NA	NA
40	IL_7RR5_041 ➜	1/C1/1006:1009,1/C1/1041:1044	NA	NA
41	IL_7RR5_042 ➜	1/C1/1009:1011,1/C1/1039:1041	NA	NA
42	IL_7RR5_043 ➜	1/C1/1013:1018,1/C1/1034:1037	NA	NA
43	IL_7RR5_044 ➜	1/C1/1069:1071,1/C1/1087:1089	NA	NA
44	IL_7RR5_045 ➜	1/C1/1074:1076,1/C1/1083:1084	NA	NA
45	IL_7RR5_046 ➜	1/C1/1120:1122,1/C1/1136:1138	NA	NA
46	IL_7RR5_047 ➜	1/C1/1167:1171,1/C1/1328:1332	NA	NA
47	IL_7RR5_048 ➜	1/C1/1173:1180,1/C1/1325:1326	NA	NA
48	IL_7RR5_049 ➜	1/C1/1180:1182,1/C1/1324:1325	NA	NA
49	IL_7RR5_050 ➜	1/C1/1187:1194,1/C1/1314:1319	NA	NA
50	IL_7RR5_051 ➜	1/C1/1194:1205,1/C1/1299:1314	NA	NA
51	IL_7RR5_052 ➜	1/C1/1207:1209,1/C1/1296:1297	NA	NA
52	IL_7RR5_053 ➜	1/C1/1218:1226,1/C1/1283:1287	NA	NA
53	IL_7RR5_054 ➜	1/C1/1233:1238,1/C1/1250:1255	NA	NA
54	IL_7RR5_055 ➜	1/C1/1262:1266,1/C1/1275:1277	NA	NA
55	IL_7RR5_056 ➜	1/C1/1376:1378,1/C1/1428:1431	NA	NA
56	IL_7RR5_057 ➜	1/C1/1385:1387,1/C1/1420:1421	NA	NA
57	IL_7RR5_058 ➜	1/C1/1388:1395,1/C1/1415:1419	NA	NA
58	IL_7RR5_059 ➜	1/C1/1398:1400,1/C1/1411:1412	NA	NA
59	IL_7RR5_060 ➜	1/C1/1444:1450,1/C1/2354:2359	NA	NA
60	IL_7RR5_061 ➜	1/C1/1500:1505,1/C1/1513:1516	NA	NA
61	IL_7RR5_062 ➜	1/C1/1532:1536,1/C1/1585:1590	NA	NA
62	IL_7RR5_064 ➜	1/C1/1618:1621,1/C1/1824:1826	NA	NA
63	IL_7RR5_065 ➜	1/C1/1623:1627,1/C1/1816:1822	NA	NA
64	IL_7RR5_066 ➜	1/C1/1627:1631,1/C1/1811:1816	NA	NA
65	IL_7RR5_067 ➜	1/C1/1645:1649,1/C1/1806:1810	NA	NA
66	IL_7RR5_068 ➜	1/C1/1661:1663,1/C1/1786:1788	NA	NA
67	IL_7RR5_069 ➜	1/C1/1669:1670,1/C1/1778:1780	NA	NA
68	IL_7RR5_070 ➜	1/C1/1670:1671,1/C1/1776:1778	NA	NA
69	IL_7RR5_071 ➜	1/C1/1694:1698,1/C1/1747:1752	NA	NA
70	IL_7RR5_072 ➜	1/C1/1702:1707,1/C1/1737:1743	NA	NA
71	IL_7RR5_073 ➜	1/C1/1711:1717,1/C1/1727:1733	NA	NA
72	IL_7RR5_074 ➜	1/C1/1883:1889,1/C1/2346:2349	NA	NA
73	IL_7RR5_075 ➜	1/C1/1895:1897,1/C1/2338:2340	NA	NA
74	IL_7RR5_076 ➜	1/C1/1898:1901,1/C1/2336:2337	NA	NA
75	IL_7RR5_077 ➜	1/C1/1901:1906,1/C1/2333:2336	NA	NA
76	IL_7RR5_078 ➜	1/C1/1918:1923,1/C1/1928:1934	NA	NA
77	IL_7RR5_079 ➜	1/C1/1940:1942,1/C1/2106:2108	NA	NA
78	IL_7RR5_080 ➜	1/C1/1947:1948,1/C1/2098:2101	NA	NA
79	IL_7RR5_081 ➜	1/C1/2128:2129,1/C1/2323:2325	NA	NA
80	IL_7RR5_082 ➜	1/C1/2156:2161,1/C1/2173:2180	NA	NA
81	IL_7RR5_083 ➜	1/C1/2196:2199,1/C1/2245:2246	NA	NA
82	IL_7RR5_084 ➜	1/C1/2200:2201,1/C1/2241:2244	NA	NA
83	IL_7RR5_085 ➜	1/C1/2204:2206,1/C1/2237:2238	NA	NA
84	IL_7RR5_086 ➜	1/C1/2206:2210,1/C1/2235:2237	NA	NA
85	IL_7RR5_087 ➜	1/C1/2211:2217,1/C1/2228:2234	NA	NA
86	IL_7RR5_088 ➜	1/C1/2276:2277,1/C1/2307:2310	NA	NA
87	IL_7RR5_089 ➜	1/C1/2277:2288,1/C1/2304:2307	NA	NA
88	IL_7RR5_090 ➜	1/C1/2391:2394,1/C1/2986:2988	NA	NA
89	IL_7RR5_091 ➜	1/C1/2396:2398,1/C1/2981:2984	NA	NA
90	IL_7RR5_092 ➜	1/C1/2409:2411,1/C1/2811:2812	NA	NA
91	IL_7RR5_093 ➜	1/C1/2412:2413,1/C1/2807:2810	NA	NA
92	IL_7RR5_094 ➜	1/C1/2423:2425,1/C1/2604:2607	NA	NA
93	IL_7RR5_098 ➜	1/C1/2520:2526,1/C1/2584:2587	NA	NA
94	IL_7RR5_099 ➜	1/C1/2614:2615,1/C1/2625:2627	NA	NA
95	IL_7RR5_100 ➜	1/C1/2666:2668,1/C1/2686:2690	NA	NA
96	IL_7RR5_101 ➜	1/C1/2718:2721,1/C1/2735:2738	NA	NA
97	IL_7RR5_102 ➜	1/C1/2770:2773,1/C1/2787:2788	NA	NA
98	IL_7RR5_103 ➜	1/C1/2823:2824,1/C1/2865:2867	NA	NA
99	IL_7RR5_104 ➜	1/C1/2824:2826,1/C1/2863:2865	NA	NA
100	IL_7RR5_105 ➜	1/C1/2826:2828,1/C1/2862:2863	NA	NA
101	IL_7RR5_106 ➜	1/C1/2828:2830,1/C1/2858:2862	NA	NA
102	IL_7RR5_107 ➜	1/C1/2835:2839,1/C1/2849:2853	NA	NA
103	IL_7RR5_108 ➜	1/C1/2876:2877,1/C1/2949:2951	NA	NA
104	IL_7RR5_109 ➜	1/C1/2879:2881,1/C1/2943:2947	NA	NA
105	IL_7RR5_110 ➜	1/C1/2881:2882,1/C1/2940:2943	NA	NA
106	IL_7RR5_111 ➜	1/C1/2889:2891,1/C1/2912:2914	NA	NA
107	IL_7RR5_112 ➜	1/C1/2891:2892,1/C1/2909:2912	NA	NA
108	IL_7RR5_113 ➜	1/C1/2918:2920,1/C1/2926:2928	NA	NA
109	IL_7RR5_114 ➜	1/C1/2960:2961,1/C1/2970:2972	NA	NA
110	IL_7RR5_115 ➜	1/C1/3004:3007,1/C1/3139:3144	NA	NA
111	IL_7RR5_116 ➜	1/C1/3012:3014,1/C1/3040:3042	NA	NA
112	IL_7RR5_117 ➜	1/C1/3018:3025,1/C1/3030:3036	NA	NA
113	IL_7RR5_118 ➜	1/C1/3047:3051,1/C1/3091:3094	NA	NA
114	IL_7RR5_119 ➜	1/C1/3054:3059,1/C1/3084:3088	NA	NA
115	IL_7RR5_120 ➜	1/C1/3063:3064,1/C1/3077:3080	NA	NA
116	IL_7RR5_121 ➜	1/C1/3103:3107,1/C1/3127:3131	NA	NA
117	IL_7RR5_122 ➜	1/C1/3164:3166,1/C1/3284:3286	NA	NA
118	IL_7RR5_123 ➜	1/C1/3168:3170,1/C1/3280:3282	NA	NA
119	IL_7RR5_124 ➜	1/C1/3177:3179,1/C1/3210:3211	NA	NA
120	IL_7RR5_125 ➜	1/C1/3179:3188,1/C1/3204:3210	NA	NA
121	IL_7RR5_126 ➜	1/C1/3193:3194,1/C1/3197:3199	NA	NA
122	IL_7RR5_127 ➜	1/C1/3225:3229,1/C1/3258:3260	NA	NA
123	IL_7RR5_128 ➜	1/C1/3233:3235,1/C1/3252:3254	NA	NA
124	IL_7RR5_129 ➜	1/C1/3235:3238,1/C1/3249:3252	NA	NA
125	IL_7RR5_130 ➜	1/C1/3300:3303,1/C1/3311:3314	NA	NA
126	IL_7RR5_131 ➜	1/C1/3318:3320,1/C1/3387:3388	NA	NA
127	IL_7RR5_132 ➜	1/C1/3324:3325,1/C1/3381:3383	NA	NA
128	IL_7RR5_133 ➜	1/C1/3328:3330,1/C1/3373:3378	NA	NA
129	IL_7RR5_134 ➜	1/C1/3332:3337,1/C1/3367:3371	NA	NA
130	IL_7RR5_135 ➜	1/C1/3340:3342,1/C1/3363:3364	NA	NA
131	IL_7RR5_136 ➜	1/C1/3342:3345,1/C1/3360:3363	NA	NA
132	IL_7RR5_137 ➜	1/C1/3349:3350,1/C1/3353:3356	NA	NA
133	IL_7RR5_138 ➜	1/C2/24:26,1/C2/600:601	NA	NA
134	IL_7RR5_139 ➜	1/C2/35:37,1/C2/471:473	NA	NA
135	IL_7RR5_140 ➜	1/C2/37:41,1/C2/466:471	NA	NA
136	IL_7RR5_141 ➜	1/C2/42:48,1/C2/431:433	NA	NA
137	IL_7RR5_142 ➜	1/C2/50:52,1/C2/428:429	NA	NA
138	IL_7RR5_143 ➜	1/C2/58:63,1/C2/87:89	NA	NA
139	IL_7RR5_144 ➜	1/C2/64:69,1/C2/82:86	NA	NA
140	IL_7RR5_145 ➜	1/C2/109:112,1/C2/302:305	NA	NA
141	IL_7RR5_146 ➜	1/C2/113:116,1/C2/300:301	NA	NA
142	IL_7RR5_147 ➜	1/C2/117:122,1/C2/295:299	NA	NA
143	IL_7RR5_148 ➜	1/C2/144:149,1/C2/165:171	NA	NA
144	IL_7RR5_149 ➜	1/C2/150:152,1/C2/162:164	NA	NA
145	IL_7RR5_150 ➜	1/C2/186:189,1/C2/196:199	NA	NA
146	IL_7RR5_151 ➜	1/C2/204:206,1/C2/259:263	NA	NA
147	IL_7RR5_152 ➜	1/C2/206:208,1/C2/257:259	NA	NA
148	IL_7RR5_153 ➜	1/C2/265:267,1/C2/288:289	NA	NA
149	IL_7RR5_154 ➜	1/C2/270:273,1/C2/283:285	NA	NA
150	IL_7RR5_155 ➜	1/C2/275:276,1/C2/279:281	NA	NA
151	IL_7RR5_156 ➜	1/C2/311:316,1/C2/348:355	NA	NA
152	IL_7RR5_157 ➜	1/C2/318:323,1/C2/345:346	NA	NA
153	IL_7RR5_158 ➜	1/C2/363:365,1/C2/376:381	NA	NA
154	IL_7RR5_159 ➜	1/C2/389:391,1/C2/406:408	NA	NA
155	IL_7RR5_160 ➜	1/C2/411:413,1/C2/420:422	NA	NA
156	IL_7RR5_161 ➜	1/C2/439:441,1/C2/463:464	NA	NA
157	IL_7RR5_162 ➜	1/C2/443:447,1/C2/460:461	NA	NA
158	IL_7RR5_163 ➜	1/C2/447:448,1/C2/458:460	NA	NA
159	IL_7RR5_164 ➜	1/C2/481:482,1/C2/505:507	NA	NA
160	IL_7RR5_165 ➜	1/C2/517:518,1/C2/533:535	NA	NA
161	IL_7RR5_166 ➜	1/C2/518:520,1/C2/532:533	NA	NA
162	IL_7RR5_167 ➜	1/C2/550:557,1/C2/587:588	NA	NA
163	IL_7RR5_168 ➜	1/C2/557:559,1/C2/586:587	NA	NA
164	IL_7RR5_169 ➜	1/C2/562:568,1/C2/575:583	NA	NA
165	IL_7RR5_170 ➜	1/C2/616:622,1/C2/1104:1105	NA	NA
166	IL_7RR5_171 ➜	1/C2/624:626,1/C2/973:975	NA	NA
167	IL_7RR5_172 ➜	1/C2/627:631,1/C2/968:972	NA	NA
168	IL_7RR5_173 ➜	1/C2/646:648,1/C2/686:688	NA	NA
169	IL_7RR5_174 ➜	1/C2/746:747,1/C2/802:805	NA	NA
170	IL_7RR5_175 ➜	1/C2/748:750,1/C2/799:801	NA	NA
171	IL_7RR5_176 ➜	1/C2/751:760,1/C2/790:798	NA	NA
172	IL_7RR5_177 ➜	1/C2/817:824,1/C2/848:854	NA	NA
173	IL_7RR5_178 ➜	1/C2/865:866,1/C2/962:965	NA	NA
174	IL_7RR5_179 ➜	1/C2/867:870,1/C2/957:961	NA	NA
175	IL_7RR5_180 ➜	1/C2/871:874,1/C2/953:956	NA	NA
176	IL_7RR5_181 ➜	1/C2/874:878,1/C2/950:953	NA	NA
177	IL_7RR5_182 ➜	1/C2/885:888,1/C2/924:927	NA	NA
178	IL_7RR5_183 ➜	1/C2/893:895,1/C2/917:919	NA	NA
179	IL_7RR5_184 ➜	1/C2/895:899,1/C2/910:917	NA	NA
180	IL_7RR5_185 ➜	1/C2/985:990,1/C2/1014:1016	NA	NA
181	IL_7RR5_186 ➜	1/C2/990:994,1/C2/1010:1014	NA	NA
182	IL_7RR5_187 ➜	1/C2/1034:1036,1/C2/1095:1101	NA	NA
183	IL_7RR5_188 ➜	1/C2/1041:1044,1/C2/1074:1077	NA	NA
184	IL_7RR5_189 ➜	1/C2/1051:1053,1/C2/1066:1067	NA	NA
185	IL_7RR5_190 ➜	1/C2/1111:1118,1/C2/1129:1134	NA	NA
186	IL_7RR5_191 ➜	1/C2/1146:1147,1/C2/1630:1632	NA	NA
187	IL_7RR5_192 ➜	1/C2/1149:1151,1/C2/1627:1628	NA	NA
188	IL_7RR5_193 ➜	1/C2/1157:1160,1/C2/1617:1621	NA	NA
189	IL_7RR5_194 ➜	1/C2/1173:1175,1/C2/1464:1466	NA	NA
190	IL_7RR5_195 ➜	1/C2/1178:1179,1/C2/1459:1461	NA	NA
191	IL_7RR5_196 ➜	1/C2/1213:1215,1/C2/1448:1450	NA	NA
192	IL_7RR5_197 ➜	1/C2/1224:1230,1/C2/1257:1259	NA	NA
193	IL_7RR5_198 ➜	1/C2/1230:1233,1/C2/1252:1257	NA	NA
194	IL_7RR5_199 ➜	1/C2/1234:1236,1/C2/1249:1251	NA	NA
195	IL_7RR5_200 ➜	1/C2/1268:1270,1/C2/1440:1441	NA	NA
196	IL_7RR5_201 ➜	1/C2/1272:1278,1/C2/1430:1438	NA	NA
197	IL_7RR5_202 ➜	1/C2/1280:1281,1/C2/1426:1428	NA	NA
198	IL_7RR5_203 ➜	1/C2/1290:1292,1/C2/1323:1325	NA	NA
199	IL_7RR5_204 ➜	1/C2/1306:1308,1/C2/1317:1318	NA	NA
200	IL_7RR5_205 ➜	1/C2/1339:1342,1/C2/1383:1385	NA	NA
201	IL_7RR5_206 ➜	1/C2/1345:1348,1/C2/1377:1380	NA	NA
202	IL_7RR5_207 ➜	1/C2/1352:1354,1/C2/1369:1373	NA	NA
203	IL_7RR5_208 ➜	1/C2/1389:1391,1/C2/1407:1412	NA	NA
204	IL_7RR5_209 ➜	1/C2/1480:1487,1/C2/1519:1527	NA	NA
205	IL_7RR5_210 ➜	1/C2/1488:1494,1/C2/1513:1518	NA	NA
206	IL_7RR5_211 ➜	1/C2/1495:1498,1/C2/1509:1512	NA	NA
207	IL_7RR5_212 ➜	1/C2/1540:1545,1/C2/1566:1571	NA	NA
208	IL_7RR5_213 ➜	1/C2/1636:1638,1/C2/1764:1767	NA	NA
209	IL_7RR5_214 ➜	1/C2/1638:1641,1/C2/1760:1764	NA	NA
210	IL_7RR5_215 ➜	1/C2/1642:1644,1/C2/1757:1759	NA	NA
211	IL_7RR5_216 ➜	1/C2/1644:1647,1/C2/1753:1757	NA	NA
212	IL_7RR5_217 ➜	1/C2/1650:1652,1/C2/1748:1750	NA	NA
213	IL_7RR5_218 ➜	1/C2/1653:1656,1/C2/1744:1747	NA	NA
214	IL_7RR5_219 ➜	1/C2/1656:1658,1/C2/1743:1744	NA	NA
215	IL_7RR5_220 ➜	1/C2/1665:1667,1/C2/1734:1736	NA	NA
216	IL_7RR5_221 ➜	1/C2/1669:1672,1/C2/1729:1732	NA	NA
217	IL_7RR5_222 ➜	1/C2/1672:1674,1/C2/1727:1729	NA	NA
218	IL_7RR5_223 ➜	1/C2/1675:1678,1/C2/1723:1726	NA	NA
219	IL_7RR5_224 ➜	1/C2/1678:1682,1/C2/1719:1723	NA	NA
220	IL_7RR5_226 ➜	1/C3/44:64,1/C3/96:100	NA	NA
221	IL_7RR5_227 ➜	1/C3/64:66,1/C3/93:96	NA	NA
222	IL_7RR5_228 ➜	1/C3/68:69,1/C3/89:91	NA	NA
223	IL_7RR5_229 ➜	1/C4/15:16,1/C4/63:65	NA	NA
224	IL_7RR5_230 ➜	1/C4/21:27,1/C4/53:58	NA	NA
225	IL_7RR5_231 ➜	1/C4/28:29,1/C4/49:52	NA	NA
226	IL_7RR5_232 ➜	1/C4/29:30,1/C4/47:49	NA	NA
227	IL_7RR5_233 ➜	1/C4/32:36,1/C4/41:45	NA	NA
228	IL_7RR5_234 ➜	1/C4/72:80,1/C4/100:106	NA	NA
229	IL_7RR5_235 ➜	1/C4/84:87,1/C4/94:96	NA	NA

Problematic loops

#	loop id	Problem	Sequence
1	IL_7RR5_017 ➜	missing nts	NA
2	IL_7RR5_063 ➜	missing nts	NA
3	IL_7RR5_095 ➜	missing nts	NA
4	IL_7RR5_096 ➜	missing nts	NA
5	IL_7RR5_097 ➜	missing nts	NA
6	IL_7RR5_225 ➜	missing nts	NA

Valid loops

#	loop id	location	annotation	motif
1	J3_7RR5_001 ➜	1/C1/113:123,1/C1/149:158,1/C1/263:267	NA	NA
2	J3_7RR5_002 ➜	1/C1/369:376,1/C1/403:404,1/C3/19:20	NA	NA
3	J3_7RR5_003 ➜	1/C1/502:503,1/C1/588:597,1/C1/606:611	NA	NA
4	J3_7RR5_004 ➜	1/C1/814:820,1/C1/905:907,1/C1/923:926	NA	NA
5	J3_7RR5_005 ➜	1/C1/828:831,1/C1/863:867,1/C1/892:897	NA	NA
6	J3_7RR5_006 ➜	1/C1/986:987,1/C1/1062:1066,1/C1/1092:1098	NA	NA
7	J3_7RR5_007 ➜	1/C1/1230:1232,1/C1/1256:1262,1/C1/1277:1279	NA	NA
8	J3_7RR5_008 ➜	1/C1/1479:1485,1/C1/1857:1859,1/C1/1871:1874	NA	NA
9	J3_7RR5_009 ➜	1/C1/1488:1491,1/C1/1837:1843,1/C1/1852:1854	NA	NA
10	J3_7RR5_010 ➜	1/C1/1526:1531,1/C1/1591:1595,1/C1/1612:1613	NA	NA
11	J3_7RR5_011 ➜	1/C1/1631:1632,1/C1/1641:1645,1/C1/1810:1811	NA	NA
12	J3_7RR5_012 ➜	1/C1/2432:2435,1/C1/2512:2517,1/C1/2590:2597	NA	NA
13	J3_7RR5_013 ➜	1/C1/2529:2532,1/C1/2547:2563,1/C1/2578:2581	NA	NA
14	J3_7RR5_014 ➜	1/C1/2664:2666,1/C1/2690:2692,1/C1/2701:2706	NA	NA
15	J3_7RR5_015 ➜	1/C1/2886:2889,1/C1/2914:2916,1/C1/2930:2936	NA	NA
16	J3_7RR5_016 ➜	1/C1/3298:3300,1/C1/3314:3318,1/C1/3388:3390	NA	NA
17	J3_7RR5_017 ➜	1/C2/41:42,1/C2/433:439,1/C2/464:466	NA	NA
18	J3_7RR5_018 ➜	1/C2/633:635,1/C2/861:865,1/C2/965:966	NA	NA
19	J3_7RR5_019 ➜	1/C2/760:763,1/C2/773:775,1/C2/785:790	NA	NA
20	J3_7RR5_020 ➜	1/C2/881:884,1/C2/928:936,1/C2/943:947	NA	NA
21	J3_7RR5_021 ➜	1/C2/1037:1039,1/C2/1079:1083,1/C2/1090:1094	NA	NA
22	J3_7RR5_022 ➜	1/C2/1161:1164,1/C2/1581:1587,1/C2/1609:1616	NA	NA
23	J3_7RR5_023 ➜	1/C2/1168:1171,1/C2/1468:1470,1/C2/1574:1577	NA	NA
24	J3_7RR5_024 ➜	1/C2/1180:1187,1/C2/1198:1209,1/C2/1454:1458	NA	NA
25	J3_7RR5_025 ➜	1/C2/1215:1220,1/C2/1263:1267,1/C2/1442:1448	NA	NA
26	J3_7RR5_026 ➜	1/C2/1283:1288,1/C2/1327:1332,1/C2/1419:1424	NA	NA
27	J3_7RR5_027 ➜	1/C2/1293:1294,1/C2/1303:1306,1/C2/1318:1322	NA	NA
28	J3_7RR5_028 ➜	1/C2/1336:1338,1/C2/1386:1389,1/C2/1412:1415	NA	NA
29	J3_7RR5_029 ➜	1/C2/1470:1474,1/C2/1533:1540,1/C2/1571:1574	NA	NA
30	J3_7RR5_030 ➜	1/C4/9:14,1/C4/66:67,1/C4/111:112	NA	NA

Problematic loops

No problematic loops

Coloring options: Nucleotide numbers

7RR5 Internal, Hairpin and 3-way Junction Loop Motifs

Valid loops

Problematic loops

Valid loops

Problematic loops

Valid loops

Problematic loops