6HCF Internal, Hairpin and 3-way Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_6HCF_001 | 1/23/12:23 | No text annotation Not in a motif group | ||
| HL_6HCF_002 | 1/23/31:39 | tRNA anticodon loop Not in a motif group | homologous HL_6UFM_002 HL_53597.2 | |
| HL_6HCF_003 | 1/23/53:61 | T-loop with 2 stacked bulged bases Not in a motif group | homologous HL_1U0B_003 HL_71309.1 | |
| HL_6HCF_004 | 1/52/30:52 | No text annotation Not in a motif group | ||
| HL_6HCF_005 | 1/52/68:73 | No text annotation Not in a motif group | homologous HL_5TBW_002 HL_02862.2 | |
| HL_6HCF_006 | 1/52/89:95 | No text annotation Not in a motif group | homologous HL_8C3A_003 HL_67216.7 | |
| HL_6HCF_007 | 1/52/131:137 | No text annotation Not in a motif group | geometric HL_5J7L_143 HL_75407.1 | |
| HL_6HCF_008 | 1/52/204:211 | No text annotation Not in a motif group | homologous HL_8C3A_005 HL_89380.2 | |
| HL_6HCF_009 | 1/52/222:226 | No text annotation Not in a motif group | homologous HL_8C3A_006 HL_98984.2 | |
| HL_6HCF_010 | 1/52/230:238 | No text annotation Not in a motif group | homologous HL_5TBW_007 HL_08002.8 | |
| HL_6HCF_011 | 1/52/289:298 | No text annotation Not in a motif group | homologous HL_5TBW_008 HL_71554.2 | |
| HL_6HCF_012 | 1/52/314:323 | No text annotation Not in a motif group | geometric HL_4QLM_002 HL_12078.2 | |
| HL_6HCF_013 | 1/52/368:373 | No text annotation Not in a motif group | homologous HL_8C3A_010 HL_42097.1 | |
| HL_6HCF_014 | 1/52/393:398 | No text annotation Not in a motif group | homologous HL_8C3A_011 HL_42097.1 | |
| HL_6HCF_015 | 1/52/516:645 | No text annotation Not in a motif group | ||
| HL_6HCF_016 | 1/52/759:904 | No text annotation Not in a motif group | ||
| HL_6HCF_017 | 1/52/961:971 | No text annotation Not in a motif group | geometric HL_3SKL_006 HL_47100.1 | |
| HL_6HCF_018 | 1/52/1178:1183 | GNRA Not in a motif group | geometric HL_3V7E_003 HL_42097.1 | |
| HL_6HCF_019 | 1/52/1316:1327 | No text annotation Not in a motif group | ||
| HL_6HCF_020 | 1/52/1362:1375 | No text annotation Not in a motif group | ||
| HL_6HCF_021 | 1/52/1389:1394 | GNRA Not in a motif group | homologous HL_5TBW_016 HL_42097.1 | |
| HL_6HCF_022 | 1/52/1404:1413 | No text annotation Not in a motif group | ||
| HL_6HCF_023 | 1/52/1436:1448 | No text annotation Not in a motif group | ||
| HL_6HCF_024 | 1/52/1479:1486 | No text annotation Not in a motif group | ||
| HL_6HCF_025 | 1/52/1561:1566 | No text annotation Not in a motif group | homologous HL_8C3A_019 HL_42097.1 | |
| HL_6HCF_026 | 1/52/1592:1603 | No text annotation Not in a motif group | ||
| HL_6HCF_027 | 1/52/1627:1635 | No text annotation Not in a motif group | homologous HL_8C3A_021 HL_33817.1 | |
| HL_6HCF_028 | 1/52/1675:1680 | No text annotation Not in a motif group | geometric HL_4V9F_026 HL_64365.1 | |
| HL_6HCF_029 | 1/52/1757:1775 | No text annotation Not in a motif group | ||
| HL_6HCF_030 | 1/52/1816:1823 | No text annotation Not in a motif group | ||
| HL_6HCF_031 | 1/52/1864:1870 | GNRA Not in a motif group | homologous HL_5TBW_025 HL_42097.1 | |
| HL_6HCF_032 | 1/52/1886:1893 | No text annotation Not in a motif group | homologous HL_5TBW_026 HL_64430.2 | |
| HL_6HCF_033 | 1/52/1978:1988 | No text annotation Not in a motif group | homologous HL_8C3A_027 HL_07145.1 | |
| HL_6HCF_034 | 1/52/2005:2014 | No text annotation Not in a motif group | homologous HL_5TBW_028 HL_09136.1 | |
| HL_6HCF_035 | 1/52/2087:2270 | No text annotation Not in a motif group | ||
| HL_6HCF_036 | 1/52/2317:2322 | GNRA Not in a motif group | homologous HL_5TBW_030 HL_42097.1 | |
| HL_6HCF_037 | 1/52/2375:2385 | No text annotation Not in a motif group | ||
| HL_6HCF_038 | 1/52/2419:2427 | No text annotation Not in a motif group | ||
| HL_6HCF_039 | 1/52/2458:2463 | No text annotation Not in a motif group | homologous HL_8C3A_033 HL_76539.2 | |
| HL_6HCF_040 | 1/52/2482:2496 | No text annotation Not in a motif group | ||
| HL_6HCF_041 | 1/52/2522:2533 | No text annotation Not in a motif group | ||
| HL_6HCF_042 | 1/52/2561:2566 | Other HL Not in a motif group | geometric HL_4C7O_001 HL_87030.2 | |
| HL_6HCF_043 | 1/52/2577:2584 | No text annotation Not in a motif group | geometric HL_5NFV_001 HL_76539.2 | |
| HL_6HCF_044 | 1/52/2622:2634 | No text annotation Not in a motif group | ||
| HL_6HCF_045 | 1/52/2664:2670 | No text annotation Not in a motif group | homologous HL_8C3A_038 HL_86373.2 | |
| HL_6HCF_046 | 1/52/2705:2710 | No text annotation Not in a motif group | geometric HL_5TBW_006 HL_98984.2 | |
| HL_6HCF_047 | 1/52/2738:2742 | No text annotation Not in a motif group | ||
| HL_6HCF_048 | 1/52/2792:2799 | No text annotation Not in a motif group | homologous HL_5TBW_041 HL_64430.2 | |
| HL_6HCF_049 | 1/52/2810:2816 | GNRA with one bulged base Not in a motif group | homologous HL_5TBW_042 HL_42097.1 | |
| HL_6HCF_050 | 1/52/2872:2877 | UNCG Not in a motif group | homologous HL_5TBW_043 HL_03562.2 | |
| HL_6HCF_051 | 1/52/2899:3600 | No text annotation Not in a motif group | ||
| HL_6HCF_052 | 1/52/3614:3618 | No text annotation Not in a motif group | homologous HL_8C3A_045 HL_20062.1 | |
| HL_6HCF_053 | 1/52/3638:3650 | No text annotation Not in a motif group | geometric HL_7A0S_045 HL_43667.1 | |
| HL_6HCF_054 | 1/52/3668:3674 | No text annotation Not in a motif group | homologous HL_8C3A_047 HL_42097.1 | |
| HL_6HCF_055 | 1/52/3722:3731 | No text annotation Not in a motif group | ||
| HL_6HCF_056 | 1/52/3757:3767 | No text annotation Not in a motif group | homologous HL_5TBW_049 HL_71924.2 | |
| HL_6HCF_057 | 1/52/3795:3805 | No text annotation Not in a motif group | ||
| HL_6HCF_058 | 1/52/3872:3883 | No text annotation Not in a motif group | ||
| HL_6HCF_059 | 1/52/4136:4148 | No text annotation Not in a motif group | geometric HL_361D_002 HL_90617.2 | |
| HL_6HCF_060 | 1/52/4192:4202 | No text annotation Not in a motif group | ||
| HL_6HCF_061 | 1/52/4208:4224 | No text annotation Not in a motif group | ||
| HL_6HCF_062 | 1/52/4250:4258 | No text annotation Not in a motif group | homologous HL_5TBW_056 HL_76406.4 | |
| HL_6HCF_063 | 1/52/4270:4277 | No text annotation Not in a motif group | homologous HL_8C3A_058 HL_12078.2 | |
| HL_6HCF_064 | 1/52/4301:4309 | No text annotation Not in a motif group | homologous HL_5TBW_058 HL_92229.2 | |
| HL_6HCF_065 | 1/52/4320:4327 | No text annotation Not in a motif group | geometric HL_7A0S_056 HL_84085.2 | |
| HL_6HCF_066 | 1/52/4352:4362 | No text annotation Not in a motif group | geometric HL_2ZZM_002 HL_23083.1 | |
| HL_6HCF_067 | 1/52/4417:4425 | No text annotation Not in a motif group | homologous HL_5TBW_061 HL_06192.2 | |
| HL_6HCF_068 | 1/52/4474:4481 | No text annotation Not in a motif group | homologous HL_5TBW_062 HL_88526.2 | |
| HL_6HCF_069 | 1/52/4497:4503 | No text annotation Not in a motif group | geometric HL_5TBW_063 HL_43656.2 | |
| HL_6HCF_070 | 1/52/4540:4545 | GNRA Not in a motif group | homologous HL_5TBW_064 HL_42097.1 | |
| HL_6HCF_071 | 1/52/4603:4608 | GNRA Not in a motif group | homologous HL_5TBW_065 HL_42097.1 | |
| HL_6HCF_072 | 1/52/4646:4651 | No text annotation Not in a motif group | homologous HL_8C3A_067 HL_46680.1 | |
| HL_6HCF_073 | 1/52/4688:4702 | No text annotation Not in a motif group | homologous HL_8C3A_068 HL_56677.7 | |
| HL_6HCF_074 | 1/52/4775:4860 | No text annotation Not in a motif group | ||
| HL_6HCF_075 | 1/52/4906:4915 | No text annotation Not in a motif group | ||
| HL_6HCF_076 | 1/52/4975:4983 | No text annotation Not in a motif group | homologous HL_8C3A_071 HL_27930.1 | |
| HL_6HCF_077 | 1/52/5021:5028 | No text annotation Not in a motif group | ||
| HL_6HCF_078 | 1/72/36:41 | No text annotation Not in a motif group | geometric HL_5TBW_185 HL_87939.1 | |
| HL_6HCF_079 | 1/72/86:91 | GNRA Not in a motif group | homologous HL_5TBW_186 HL_42097.1 | |
| HL_6HCF_080 | 1/82/46:57 | No text annotation Not in a motif group | ||
| HL_6HCF_082 | 1/82/107:112 | No text annotation Not in a motif group | homologous HL_5TBW_075 HL_87939.1 | |
| HL_6HCF_083 | 1/82/120:130 | No text annotation Not in a motif group | ||
| HL_6HCF_084 | 1/A1/7:17 | No text annotation Not in a motif group | homologous HL_4V88_186 HL_89881.2 | |
| HL_6HCF_085 | 1/A1/69:80 | No text annotation Not in a motif group | ||
| HL_6HCF_086 | 1/A1/156:162 | Other HL Not in a motif group | homologous HL_4V88_188 HL_76539.2 | |
| HL_6HCF_087 | 1/A1/197:202 | GNRA Not in a motif group | geometric HL_5J7L_007 HL_42097.1 | |
| HL_6HCF_088 | 1/A1/288:295 | T-loop with 1 bulged base Not in a motif group | homologous HL_4V88_191 HL_27930.1 | |
| HL_6HCF_089 | 1/A1/377:387 | No text annotation Not in a motif group | ||
| HL_6HCF_090 | 1/A1/416:421 | No text annotation Not in a motif group | homologous HL_4V88_194 HL_50142.2 | |
| HL_6HCF_091 | 1/A1/439:454 | No text annotation Not in a motif group | ||
| HL_6HCF_092 | 1/A1/462:467 | UNCG Not in a motif group | homologous HL_4V88_196 HL_03562.2 | |
| HL_6HCF_093 | 1/A1/498:504 | No text annotation Not in a motif group | homologous HL_4V88_197 HL_09136.1 | |
| HL_6HCF_094 | 1/A1/538:545 | No text annotation Not in a motif group | geometric HL_2Y9H_005 HL_47100.1 | |
| HL_6HCF_095 | 1/A1/569:581 | No text annotation Not in a motif group | homologous HL_4V88_199 HL_06285.2 | |
| HL_6HCF_096 | 1/A1/618:623 | Other HL Not in a motif group | homologous HL_4V88_200 HL_53845.1 | |
| HL_6HCF_098 | 1/A1/884:902 | No text annotation Not in a motif group | ||
| HL_6HCF_099 | 1/A1/957:966 | No text annotation Not in a motif group | homologous HL_4V88_206 HL_12326.1 | |
| HL_6HCF_100 | 1/A1/993:1000 | No text annotation Not in a motif group | geometric HL_7A0S_056 HL_84085.2 | |
| HL_6HCF_101 | 1/A1/1054:1064 | No text annotation Not in a motif group | homologous HL_4V88_208 HL_12326.1 | |
| HL_6HCF_102 | 1/A1/1111:1122 | No text annotation Not in a motif group | ||
| HL_6HCF_103 | 1/A1/1141:1146 | Other HL Not in a motif group | homologous HL_4V88_210 HL_42097.1 | |
| HL_6HCF_104 | 1/A1/1178:1183 | GNRA Not in a motif group | homologous HL_4V88_211 HL_42097.1 | |
| HL_6HCF_105 | 1/A1/1245:1254 | No text annotation Not in a motif group | homologous HL_4V88_212 HL_73530.2 | |
| HL_6HCF_106 | 1/A1/1294:1305 | No text annotation Not in a motif group | ||
| HL_6HCF_107 | 1/A1/1353:1358 | GNRA Not in a motif group | homologous HL_4V88_214 HL_42097.1 | |
| HL_6HCF_108 | 1/A1/1366:1373 | No text annotation Not in a motif group | homologous HL_4V88_215 HL_71554.2 | |
| HL_6HCF_110 | 1/A1/1460:1466 | No text annotation Not in a motif group | homologous HL_4V88_217 HL_42097.1 | |
| HL_6HCF_111 | 1/A1/1565:1570 | GNRA Not in a motif group | homologous HL_4V88_218 HL_42097.1 | |
| HL_6HCF_112 | 1/A1/1614:1625 | No text annotation Not in a motif group | homologous HL_4V88_219 HL_22554.1 | |
| HL_6HCF_113 | 1/A1/1654:1670 | No text annotation Not in a motif group | ||
| HL_6HCF_115 | 1/A1/1847:1852 | Other HL Not in a motif group | homologous HL_4V88_222 HL_16173.1 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_6HCF_081 | No text annotation | ||
| HL_6HCF_097 | No text annotation | ||
| HL_6HCF_109 | No text annotation | ||
| HL_6HCF_114 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_6HCF_001 | 1/23/2:4, 1/23/69:71 | No text annotation Not in a motif group | homologous IL_5EL4_357 NA | |
| IL_6HCF_002 | 1/52/4:7, 1/82/149:153 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_1L9A_005 IL_30621.2 | |
| IL_6HCF_003 | 1/52/12:14, 1/82/143:144 | No text annotation Not in a motif group | homologous IL_8C3A_003 IL_83039.13 | |
| IL_6HCF_004 | 1/52/81:89, 1/52/95:102 | 9x8 Sarcin-Ricin; G-bulge Not in a motif group | geometric IL_4WF9_008 IL_35728.2 | |
| IL_6HCF_005 | 1/52/118:121, 1/52/152:153 | Multiple bulged bases Not in a motif group | geometric IL_4LFB_007 IL_16396.2 | |
| IL_6HCF_006 | 1/52/121:122, 1/52/147:152 | No text annotation Not in a motif group | geometric IL_5TBW_007 IL_19724.2 | |
| IL_6HCF_007 | 1/52/124:126, 1/52/142:145 | No text annotation Not in a motif group | homologous IL_8C3A_008 IL_95997.1 | |
| IL_6HCF_008 | 1/52/179:189, 1/52/252:257 | No text annotation Not in a motif group | ||
| IL_6HCF_009 | 1/52/195:196, 1/52/244:246 | No text annotation Not in a motif group | ||
| IL_6HCF_010 | 1/52/339:342, 1/82/32:33 | Minor groove platform Not in a motif group | geometric IL_7RQB_073 IL_88739.1 | |
| IL_6HCF_011 | 1/52/348:350, 1/82/25:26 | No text annotation Not in a motif group | homologous IL_8C3A_014 IL_37497.2 | |
| IL_6HCF_012 | 1/52/387:390, 1/52/401:414 | No text annotation Not in a motif group | homologous IL_8C3A_015 IL_60992.6 | |
| IL_6HCF_013 | 1/52/415:421, 1/82/13:19 | Triple sheared with non-canonical cWW Not in a motif group | homologous IL_5TBW_015 IL_66414.6 | |
| IL_6HCF_014 | 1/52/443:447, 1/52/1299:1304 | No text annotation Not in a motif group | ||
| IL_6HCF_015 | 1/52/448:451, 1/52/1296:1298 | No text annotation Not in a motif group | geometric IL_4WF9_042 IL_95997.1 | |
| IL_6HCF_016 | 1/52/459:460, 1/52/695:697 | No text annotation Not in a motif group | ||
| IL_6HCF_017 | 1/52/462:465, 1/52/690:693 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_6CZR_168 IL_67743.1 | |
| IL_6HCF_018 | 1/52/466:472, 1/52/682:689 | No text annotation Not in a motif group | ||
| IL_6HCF_019 | 1/52/481:482, 1/52/672:673 | Single bulged C Not in a motif group | geometric IL_1S03_006 IL_61258.12 | |
| IL_6HCF_020 | 1/52/482:487, 1/52/669:672 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_4WF9_109 IL_30621.2 | |
| IL_6HCF_021 | 1/52/487:488, 1/52/665:669 | Multiple bulged bases Not in a motif group | geometric IL_1R3E_001 IL_16396.2 | |
| IL_6HCF_022 | 1/52/491:493, 1/52/661:662 | No text annotation Not in a motif group | ||
| IL_6HCF_023 | 1/52/497:500, 1/52/655:657 | No text annotation Not in a motif group | geometric IL_5Z1I_001 IL_95997.1 | |
| IL_6HCF_024 | 1/52/508:510, 1/52/649:650 | Single bulged A Not in a motif group | geometric IL_6WPI_001 IL_37497.2 | |
| IL_6HCF_025 | 1/52/709:710, 1/52/1286:1288 | Single bulged G Not in a motif group | geometric IL_4LFB_036 IL_00225.2 | |
| IL_6HCF_026 | 1/52/723:725, 1/52/941:945 | No text annotation Not in a motif group | ||
| IL_6HCF_027 | 1/52/727:731, 1/52/938:939 | No text annotation Not in a motif group | ||
| IL_6HCF_028 | 1/52/731:737, 1/52/927:938 | No text annotation Not in a motif group | ||
| IL_6HCF_029 | 1/52/737:739, 1/52/923:927 | No text annotation Not in a motif group | ||
| IL_6HCF_030 | 1/52/744:753, 1/52/910:920 | No text annotation Not in a motif group | ||
| IL_6HCF_031 | 1/52/1074:1077, 1/52/1233:1236 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_6CZR_168 IL_67743.1 | |
| IL_6HCF_033 | 1/52/1082:1084, 1/52/1213:1217 | Isolated near basepair Not in a motif group | geometric IL_7A0S_030 IL_52767.2 | |
| IL_6HCF_034 | 1/52/1086:1087, 1/52/1209:1211 | No text annotation Not in a motif group | ||
| IL_6HCF_035 | 1/52/1097:1098, 1/52/1197:1199 | Single stack bend Not in a motif group | geometric IL_7A0S_054 IL_76488.2 | |
| IL_6HCF_036 | 1/52/1173:1178, 1/52/1183:1188 | No text annotation Not in a motif group | ||
| IL_6HCF_037 | 1/52/1357:1360, 1/52/1379:1382 | No text annotation Not in a motif group | ||
| IL_6HCF_038 | 1/52/1360:1361, 1/52/1376:1379 | Major groove outside cWW, minor groove, intercalation pocket Not in a motif group | geometric IL_1NBS_009 IL_69996.1 | |
| IL_6HCF_039 | 1/52/1425:1430, 1/52/1454:1460 | No text annotation Not in a motif group | ||
| IL_6HCF_040 | 1/52/1431:1435, 1/52/1449:1453 | Triple sheared Not in a motif group | geometric IL_7A0S_087 IL_56467.8 | |
| IL_6HCF_041 | 1/52/1466:1472, 1/52/1492:1499 | No text annotation Not in a motif group | ||
| IL_6HCF_042 | 1/52/1474:1476, 1/52/1489:1490 | No text annotation Not in a motif group | ||
| IL_6HCF_043 | 1/52/1520:1522, 1/52/1655:1657 | No text annotation Not in a motif group | geometric IL_5TBW_027 IL_95997.1 | |
| IL_6HCF_044 | 1/52/1522:1526, 1/52/1648:1655 | No text annotation Not in a motif group | homologous IL_8C3A_030 IL_17470.6 | |
| IL_6HCF_045 | 1/52/1550:1551, 1/52/1576:1578 | Single bulged G Not in a motif group | geometric IL_4LVW_002 IL_00225.2 | |
| IL_6HCF_046 | 1/52/1551:1558, 1/52/1569:1576 | No text annotation Not in a motif group | ||
| IL_6HCF_047 | 1/52/1585:1589, 1/52/1605:1608 | No text annotation Not in a motif group | ||
| IL_6HCF_048 | 1/52/1590:1592, 1/52/1603:1604 | Single bulged U Not in a motif group | geometric IL_4V9F_029 IL_83039.13 | |
| IL_6HCF_049 | 1/52/1624:1626, 1/52/1636:1640 | No text annotation Not in a motif group | homologous IL_8C3A_036 IL_90991.6 | |
| IL_6HCF_050 | 1/52/1671:1673, 1/52/1682:1684 | No text annotation Not in a motif group | homologous IL_8C3A_037 IL_95997.1 | |
| IL_6HCF_051 | 1/52/1686:1689, 1/52/1847:1851 | No text annotation Not in a motif group | ||
| IL_6HCF_052 | 1/52/1692:1721, 1/52/1841:1844 | No text annotation Not in a motif group | ||
| IL_6HCF_053 | 1/52/1723:1725, 1/52/1838:1839 | No text annotation Not in a motif group | homologous IL_8C3A_040 IL_00225.2 | |
| IL_6HCF_054 | 1/52/1732:1738, 1/52/1790:1797 | No text annotation Not in a motif group | ||
| IL_6HCF_055 | 1/52/1738:1746, 1/52/1784:1790 | No text annotation Not in a motif group | ||
| IL_6HCF_056 | 1/52/1746:1751, 1/52/1779:1784 | No text annotation Not in a motif group | ||
| IL_6HCF_057 | 1/52/1752:1757, 1/52/1775:1778 | No text annotation Not in a motif group | ||
| IL_6HCF_058 | 1/52/1814:1816, 1/52/1823:1824 | Single bulged G Not in a motif group | geometric IL_4V88_442 IL_00225.2 | |
| IL_6HCF_059 | 1/52/1858:1861, 1/52/1873:1876 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_1JID_002 IL_30621.2 | |
| IL_6HCF_060 | 1/52/1861:1863, 1/52/1871:1873 | Isolated cWS basepair Not in a motif group | geometric IL_5TBW_047 IL_52767.2 | |
| IL_6HCF_061 | 1/52/1905:1909, 1/52/2067:2071 | UAA/GAN Not in a motif group | homologous IL_5TBW_048 IL_89002.2 | |
| IL_6HCF_062 | 1/52/1911:1920, 1/52/2063:2065 | No text annotation Not in a motif group | geometric IL_3GM7_006 IL_95997.1 | |
| IL_6HCF_063 | 1/52/1920:1922, 1/52/2062:2063 | Single bulged C Not in a motif group | geometric IL_3SNP_003 IL_61258.12 | |
| IL_6HCF_064 | 1/52/1926:1933, 1/52/2053:2058 | No text annotation Not in a motif group | homologous IL_5TBW_051 IL_27086.1 | |
| IL_6HCF_065 | 1/52/1933:1944, 1/52/2038:2053 | No text annotation Not in a motif group | geometric IL_5TBW_052 IL_53762.1 | |
| IL_6HCF_066 | 1/52/1946:1948, 1/52/2035:2036 | Single bulged U Not in a motif group | homologous IL_5TBW_053 IL_83039.13 | |
| IL_6HCF_067 | 1/52/2001:2005, 1/52/2014:2016 | Major groove platform with extra cWW Not in a motif group | geometric IL_5D8H_003 IL_05564.2 | |
| IL_6HCF_068 | 1/52/2083:2085, 1/52/2272:2273 | Single bulged U Not in a motif group | geometric IL_6CZR_156 IL_83039.13 | |
| IL_6HCF_069 | 1/52/2298:2302, 1/52/2333:2336 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_5J7L_283 IL_30621.2 | |
| IL_6HCF_070 | 1/52/2302:2309, 1/52/2329:2333 | Kink-turn Not in a motif group | geometric IL_3V7E_002 IL_70923.2 | |
| IL_6HCF_071 | 1/52/2311:2315, 1/52/2324:2327 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_4V88_429 IL_30621.2 | |
| IL_6HCF_072 | 1/52/2358:2364, 1/52/3858:3863 | 7x6 Sarcin-Ricin; G-bulge Not in a motif group | homologous IL_5TBW_061 IL_76042.2 | |
| IL_6HCF_073 | 1/52/2415:2419, 1/52/2427:2429 | C-loop Not in a motif group | geometric IL_7A0S_047 IL_37712.2 | |
| IL_6HCF_074 | 1/52/2446:2450, 1/52/2509:2514 | UAA/GAN Not in a motif group | homologous IL_5TBW_063 IL_89002.2 | |
| IL_6HCF_075 | 1/52/2477:2479, 1/52/2499:2500 | Single stack bend Not in a motif group | geometric IL_5VSU_003 IL_76488.2 | |
| IL_6HCF_076 | 1/52/2540:2542, 1/52/2775:2776 | Single stack bend Not in a motif group | geometric IL_7A0S_054 IL_76488.2 | |
| IL_6HCF_077 | 1/52/2542:2547, 1/52/2772:2775 | No text annotation Not in a motif group | ||
| IL_6HCF_078 | 1/52/2613:2614, 1/52/2724:2726 | No text annotation Not in a motif group | homologous IL_8C3A_075 IL_61258.12 | |
| IL_6HCF_079 | 1/52/2614:2615, 1/52/2722:2724 | Single stack bend Not in a motif group | homologous IL_5TBW_070 IL_76488.2 | |
| IL_6HCF_080 | 1/52/2646:2648, 1/52/2685:2688 | Decoding loop related Not in a motif group | geometric IL_2O3X_003 IL_82842.2 | |
| IL_6HCF_081 | 1/52/2651:2653, 1/52/2681:2682 | No text annotation Not in a motif group | ||
| IL_6HCF_082 | 1/52/2655:2662, 1/52/2672:2679 | No text annotation Not in a motif group | ||
| IL_6HCF_083 | 1/52/2704:2705, 1/52/2710:2712 | No text annotation Not in a motif group | ||
| IL_6HCF_084 | 1/52/2831:2838, 1/52/3850:3854 | No text annotation Not in a motif group | ||
| IL_6HCF_085 | 1/52/2843:2846, 1/52/3842:3845 | No text annotation Not in a motif group | ||
| IL_6HCF_086 | 1/52/2864:2865, 1/52/2885:2887 | Single stack bend Not in a motif group | geometric IL_7KGA_003 IL_76488.2 | |
| IL_6HCF_087 | 1/52/2867:2872, 1/52/2877:2883 | tSH-tSH-tHH-tHS Not in a motif group | geometric IL_7RQB_068 IL_65969.2 | |
| IL_6HCF_088 | 1/52/2888:2891, 1/52/3610:3613 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_1D4R_001 IL_30621.2 | |
| IL_6HCF_089 | 1/52/2896:2897, 1/52/3602:3605 | No text annotation Not in a motif group | homologous IL_8C3A_086 IL_74125.1 | |
| IL_6HCF_090 | 1/52/3632:3633, 1/52/3827:3829 | No text annotation Not in a motif group | homologous IL_8C3A_087 IL_37497.2 | |
| IL_6HCF_091 | 1/52/3660:3665, 1/52/3677:3684 | Kink-turn related Not in a motif group | homologous IL_5TBW_083 IL_64509.1 | |
| IL_6HCF_092 | 1/52/3700:3703, 1/52/3749:3750 | Major groove outside cWW, minor groove, intercalation pocket Not in a motif group | geometric IL_5TBW_084 IL_88739.1 | |
| IL_6HCF_093 | 1/52/3703:3705, 1/52/3745:3749 | No text annotation Not in a motif group | ||
| IL_6HCF_094 | 1/52/3708:3710, 1/52/3741:3742 | No text annotation Not in a motif group | homologous IL_8C3A_091 IL_76488.2 | |
| IL_6HCF_095 | 1/52/3780:3792, 1/52/3808:3814 | No text annotation Not in a motif group | ||
| IL_6HCF_096 | 1/52/3893:3898, 1/52/4563:4567 | No text annotation Not in a motif group | ||
| IL_6HCF_097 | 1/52/3899:3902, 1/52/4558:4562 | No text annotation Not in a motif group | ||
| IL_6HCF_098 | 1/52/3913:3915, 1/52/4388:4389 | No text annotation Not in a motif group | homologous IL_8C3A_098 IL_83039.13 | |
| IL_6HCF_099 | 1/52/3926:3929, 1/52/4181:4185 | No text annotation Not in a motif group | ||
| IL_6HCF_100 | 1/52/3946:3950, 1/52/4062:4066 | No text annotation Not in a motif group | ||
| IL_6HCF_101 | 1/52/3950:3952, 1/52/4060:4062 | Isolated near basepair Not in a motif group | geometric IL_4V88_406 IL_52767.2 | |
| IL_6HCF_102 | 1/52/3955:3966, 1/52/4055:4057 | No text annotation Not in a motif group | ||
| IL_6HCF_103 | 1/52/3968:3974, 1/52/4037:4053 | No text annotation Not in a motif group | ||
| IL_6HCF_104 | 1/52/4082:4089, 1/52/4160:4164 | No text annotation Not in a motif group | ||
| IL_6HCF_105 | 1/52/4191:4192, 1/52/4202:4204 | Single bulged A Not in a motif group | homologous IL_5TBW_098 IL_37497.2 | |
| IL_6HCF_106 | 1/52/4243:4245, 1/52/4263:4267 | Isolated tHS basepair with bulges Not in a motif group | homologous IL_5TBW_099 IL_38958.7 | |
| IL_6HCF_107 | 1/52/4291:4294, 1/52/4316:4318 | No text annotation Not in a motif group | geometric IL_4V88_455 IL_10023.1 | |
| IL_6HCF_108 | 1/52/4295:4297, 1/52/4314:4315 | Single stack bend Not in a motif group | geometric IL_7A0S_054 IL_76488.2 | |
| IL_6HCF_109 | 1/52/4297:4300, 1/52/4310:4314 | No text annotation Not in a motif group | ||
| IL_6HCF_110 | 1/52/4347:4352, 1/52/4362:4365 | No text annotation Not in a motif group | ||
| IL_6HCF_111 | 1/52/4400:4408, 1/52/4434:4444 | No text annotation Not in a motif group | ||
| IL_6HCF_112 | 1/52/4412:4416, 1/52/4426:4430 | No text annotation Not in a motif group | homologous IL_8C3A_114 NA | |
| IL_6HCF_113 | 1/52/4453:4454, 1/52/4526:4528 | Major groove platform Not in a motif group | homologous IL_5TBW_107 IL_76223.2 | |
| IL_6HCF_114 | 1/52/4456:4458, 1/52/4520:4524 | Isolated non-canonical cWW with bulges Not in a motif group | homologous IL_5TBW_108 IL_90933.2 | |
| IL_6HCF_115 | 1/52/4458:4461, 1/52/4515:4520 | No text annotation Not in a motif group | ||
| IL_6HCF_116 | 1/52/4466:4470, 1/52/4485:4491 | No text annotation Not in a motif group | ||
| IL_6HCF_117 | 1/52/4495:4497, 1/52/4503:4505 | No text annotation Not in a motif group | homologous IL_8C3A_120 IL_95997.1 | |
| IL_6HCF_118 | 1/52/4537:4538, 1/52/4547:4549 | Single bulged A Not in a motif group | geometric IL_4V88_409 IL_37497.2 | |
| IL_6HCF_119 | 1/52/4578:4580, 1/52/4724:4725 | Single stack bend Not in a motif group | geometric IL_5J7L_032 IL_76488.2 | |
| IL_6HCF_120 | 1/52/4580:4582, 1/52/4721:4724 | No text annotation Not in a motif group | ||
| IL_6HCF_121 | 1/52/4582:4585, 1/52/4717:4721 | Double sheared Not in a motif group | homologous IL_5TBW_114 IL_09705.9 | |
| IL_6HCF_122 | 1/52/4590:4592, 1/52/4618:4620 | No text annotation Not in a motif group | homologous IL_5TBW_115 IL_95997.1 | |
| IL_6HCF_123 | 1/52/4596:4603, 1/52/4608:4614 | 8x7 Sarcin-Ricin; G-bulge Not in a motif group | geometric IL_5TBW_116 IL_04346.7 | |
| IL_6HCF_124 | 1/52/4623:4630, 1/52/4668:4674 | No text annotation Not in a motif group | ||
| IL_6HCF_125 | 1/52/4632:4637, 1/52/4662:4666 | UAA/GAN related Not in a motif group | homologous IL_5TBW_118 IL_17136.1 | |
| IL_6HCF_126 | 1/52/4637:4642, 1/52/4655:4662 | No text annotation Not in a motif group | ||
| IL_6HCF_127 | 1/52/4679:4685, 1/52/4705:4711 | No text annotation Not in a motif group | ||
| IL_6HCF_128 | 1/52/4737:4746, 1/52/4954:4962 | No text annotation Not in a motif group | ||
| IL_6HCF_129 | 1/52/4769:4774, 1/52/4861:4865 | No text annotation Not in a motif group | ||
| IL_6HCF_130 | 1/52/4884:4888, 1/52/4931:4935 | No text annotation Not in a motif group | geometric IL_5BTM_001 IL_05145.2 | |
| IL_6HCF_131 | 1/52/4890:4896, 1/52/4924:4929 | No text annotation Not in a motif group | ||
| IL_6HCF_132 | 1/52/4896:4902, 1/52/4919:4924 | No text annotation Not in a motif group | ||
| IL_6HCF_133 | 1/52/4991:4994, 1/52/5057:5060 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_6CZR_168 IL_67743.1 | |
| IL_6HCF_134 | 1/52/4996:4998, 1/52/5052:5055 | Isolated non-canonical cWW with bulges Not in a motif group | geometric IL_4V9F_097 IL_82068.2 | |
| IL_6HCF_135 | 1/52/5000:5003, 1/52/5044:5050 | No text annotation Not in a motif group | ||
| IL_6HCF_136 | 1/52/5003:5009, 1/52/5039:5044 | No text annotation Not in a motif group | ||
| IL_6HCF_137 | 1/52/5012:5017, 1/52/5032:5036 | No text annotation Not in a motif group | ||
| IL_6HCF_138 | 1/72/15:16, 1/72/62:64 | Single bulged C Not in a motif group | geometric IL_5TBW_069 IL_61258.12 | |
| IL_6HCF_139 | 1/72/21:27, 1/72/52:57 | No text annotation Not in a motif group | geometric IL_5TBW_373 IL_10207.2 | |
| IL_6HCF_140 | 1/72/27:30, 1/72/47:52 | No text annotation Not in a motif group | ||
| IL_6HCF_141 | 1/72/32:36, 1/72/41:45 | Symmetric double minor groove platform Not in a motif group | homologous IL_5TBW_376 IL_58103.6 | |
| IL_6HCF_142 | 1/72/71:78, 1/72/98:104 | 8x7 Sarcin-Ricin; G-bulge Not in a motif group | homologous IL_5TBW_377 IL_04346.7 | |
| IL_6HCF_143 | 1/72/79:85, 1/72/92:97 | No text annotation Not in a motif group | geometric IL_6O5F_001 IL_04668.1 | |
| IL_6HCF_144 | 1/A1/23:25, 1/A1/649:651 | No text annotation Not in a motif group | geometric IL_4M4O_001 IL_95997.1 | |
| IL_6HCF_145 | 1/A1/34:36, 1/A1/519:521 | UC cWW Not in a motif group | homologous IL_4V88_385 IL_51629.2 | |
| IL_6HCF_146 | 1/A1/37:40, 1/A1/514:518 | Double sheared Not in a motif group | geometric IL_4WF9_016 IL_09705.9 | |
| IL_6HCF_147 | 1/A1/41:47, 1/A1/479:481 | No text annotation Not in a motif group | homologous IL_4V88_387 IL_33912.1 | |
| IL_6HCF_148 | 1/A1/49:51, 1/A1/476:477 | Minor groove platform Not in a motif group | homologous IL_4V88_388 IL_93353.1 | |
| IL_6HCF_149 | 1/A1/57:62, 1/A1/86:88 | No text annotation Not in a motif group | homologous IL_4V88_389 IL_95004.1 | |
| IL_6HCF_150 | 1/A1/63:69, 1/A1/80:85 | No text annotation Not in a motif group | ||
| IL_6HCF_151 | 1/A1/108:110, 1/A1/351:353 | No text annotation Not in a motif group | geometric IL_1ZX7_004 IL_95997.1 | |
| IL_6HCF_152 | 1/A1/110:115, 1/A1/348:351 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_1D4R_001 IL_30621.2 | |
| IL_6HCF_153 | 1/A1/116:121, 1/A1/343:347 | No text annotation Not in a motif group | homologous IL_4V88_393 IL_64181.2 | |
| IL_6HCF_155 | 1/A1/144:151, 1/A1/167:175 | No text annotation Not in a motif group | ||
| IL_6HCF_156 | 1/A1/152:154, 1/A1/164:166 | No text annotation Not in a motif group | homologous IL_4V88_395 IL_53251.2 | |
| IL_6HCF_157 | 1/A1/188:192, 1/A1/207:211 | Triple sheared Not in a motif group | geometric IL_4WFL_001 IL_56467.8 | |
| IL_6HCF_159 | 1/A1/312:315, 1/A1/335:337 | No text annotation Not in a motif group | geometric IL_4V88_455 IL_10023.1 | |
| IL_6HCF_160 | 1/A1/317:320, 1/A1/331:333 | Other IL Not in a motif group | geometric IL_5TBW_064 IL_84698.1 | |
| IL_6HCF_161 | 1/A1/320:323, 1/A1/329:331 | No text annotation Not in a motif group | ||
| IL_6HCF_162 | 1/A1/359:364, 1/A1/396:403 | Kink-turn with non-sequential stacking Not in a motif group | homologous IL_4V88_402 IL_45067.2 | |
| IL_6HCF_163 | 1/A1/366:371, 1/A1/393:394 | No text annotation Not in a motif group | ||
| IL_6HCF_164 | 1/A1/411:413, 1/A1/424:429 | No text annotation Not in a motif group | homologous IL_4V88_404 IL_11347.1 | |
| IL_6HCF_165 | 1/A1/436:439, 1/A1/454:457 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_1D4R_001 IL_30621.2 | |
| IL_6HCF_166 | 1/A1/459:462, 1/A1/467:470 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_4EYA_010 IL_30621.2 | |
| IL_6HCF_167 | 1/A1/487:489, 1/A1/511:512 | Single bulged U Not in a motif group | homologous IL_4V88_407 IL_83039.13 | |
| IL_6HCF_168 | 1/A1/491:496, 1/A1/506:509 | C-loop with extra cWW pair Not in a motif group | homologous IL_4V88_408 IL_93630.2 | |
| IL_6HCF_169 | 1/A1/527:528, 1/A1/557:559 | Single stack bend Not in a motif group | geometric IL_5TBW_070 IL_76488.2 | |
| IL_6HCF_170 | 1/A1/528:531, 1/A1/553:557 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_4V88_429 IL_30621.2 | |
| IL_6HCF_171 | 1/A1/535:538, 1/A1/545:549 | No text annotation Not in a motif group | ||
| IL_6HCF_172 | 1/A1/563:565, 1/A1/585:592 | No text annotation Not in a motif group | homologous IL_8C3A_420 IL_55023.1 | |
| IL_6HCF_173 | 1/A1/566:569, 1/A1/581:584 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_6JDV_001 IL_30621.2 | |
| IL_6HCF_174 | 1/A1/598:608, 1/A1/635:638 | No text annotation Not in a motif group | ||
| IL_6HCF_175 | 1/A1/610:617, 1/A1/624:633 | No text annotation Not in a motif group | ||
| IL_6HCF_176 | 1/A1/665:671, 1/A1/1161:1162 | No text annotation Not in a motif group | homologous IL_4V88_416 IL_69996.1 | |
| IL_6HCF_177 | 1/A1/673:675, 1/A1/1030:1032 | No text annotation Not in a motif group | homologous IL_4V88_417 IL_95997.1 | |
| IL_6HCF_178 | 1/A1/676:680, 1/A1/1025:1029 | tSH-tHW-tHS Not in a motif group | homologous IL_4V88_418 IL_17136.1 | |
| IL_6HCF_179 | 1/A1/692:694, 1/A1/732:734 | No text annotation Not in a motif group | homologous IL_4V88_419 IL_95997.1 | |
| IL_6HCF_180 | 1/A1/757:758, 1/A1/786:788 | Single stack bend Not in a motif group | geometric IL_5J7L_044 IL_76488.2 | |
| IL_6HCF_181 | 1/A1/802:803, 1/A1/860:863 | Major groove minor groove platform; mini C-loop Not in a motif group | homologous IL_4V88_423 IL_09061.6 | |
| IL_6HCF_182 | 1/A1/805:807, 1/A1/856:858 | No text annotation Not in a motif group | homologous IL_4V88_424 IL_95997.1 | |
| IL_6HCF_183 | 1/A1/807:815, 1/A1/849:856 | No text annotation Not in a motif group | homologous IL_4V88_425 IL_69091.1 | |
| IL_6HCF_184 | 1/A1/816:831, 1/A1/843:848 | No text annotation Not in a motif group | ||
| IL_6HCF_185 | 1/A1/877:879, 1/A1/907:909 | Isolated cWH basepair Not in a motif group | homologous IL_4V88_427 IL_51629.2 | |
| IL_6HCF_186 | 1/A1/922:923, 1/A1/1019:1022 | Major groove platform; stack outside cWW Not in a motif group | homologous IL_4V88_428 IL_50694.2 | |
| IL_6HCF_187 | 1/A1/924:927, 1/A1/1014:1018 | Tandem non-canonical cWW pairs Not in a motif group | homologous IL_4V88_429 IL_30621.2 | |
| IL_6HCF_188 | 1/A1/927:935, 1/A1/1007:1014 | No text annotation Not in a motif group | ||
| IL_6HCF_189 | 1/A1/941:945, 1/A1/981:985 | No text annotation Not in a motif group | ||
| IL_6HCF_190 | 1/A1/952:956, 1/A1/967:974 | Kink-turn Not in a motif group | homologous IL_4V88_434 IL_45067.2 | |
| IL_6HCF_191 | 1/A1/1041:1047, 1/A1/1071:1074 | No text annotation Not in a motif group | ||
| IL_6HCF_192 | 1/A1/1047:1051, 1/A1/1067:1071 | tSH-tHW-tHS Not in a motif group | geometric IL_4LFB_033 IL_17136.1 | |
| IL_6HCF_193 | 1/A1/1098:1101, 1/A1/1131:1134 | Tandem non-canonical cWW pairs Not in a motif group | homologous IL_4V88_438 IL_30621.2 | |
| IL_6HCF_194 | 1/A1/1101:1103, 1/A1/1129:1131 | Isolated cWH basepair Not in a motif group | geometric IL_3D0M_002 IL_51629.2 | |
| IL_6HCF_195 | 1/A1/1108:1110, 1/A1/1123:1124 | Minor groove platform Not in a motif group | geometric IL_4V88_412 IL_93353.1 | |
| IL_6HCF_196 | 1/A1/1167:1175, 1/A1/1186:1192 | No text annotation Not in a motif group | ||
| IL_6HCF_197 | 1/A1/1206:1208, 1/A1/1691:1692 | Single bulged G Not in a motif group | homologous IL_4V88_442 IL_00225.2 | |
| IL_6HCF_198 | 1/A1/1230:1232, 1/A1/1526:1528 | No text annotation Not in a motif group | homologous IL_4V88_444 IL_95997.1 | |
| IL_6HCF_199 | 1/A1/1235:1236, 1/A1/1521:1523 | Minor groove platform Not in a motif group | homologous IL_4V88_445 IL_42622.2 | |
| IL_6HCF_200 | 1/A1/1291:1294, 1/A1/1305:1308 | No text annotation Not in a motif group | ||
| IL_6HCF_201 | 1/A1/1325:1327, 1/A1/1502:1503 | Single bulged U Not in a motif group | homologous IL_4V88_449 IL_83039.13 | |
| IL_6HCF_202 | 1/A1/1329:1333, 1/A1/1498:1500 | Isolated cWS basepair Not in a motif group | homologous IL_4V88_450 IL_76319.2 | |
| IL_6HCF_203 | 1/A1/1333:1335, 1/A1/1492:1498 | Minor groove platform with extra cWW Not in a motif group | geometric IL_4V88_451 IL_92788.2 | |
| IL_6HCF_204 | 1/A1/1337:1338, 1/A1/1488:1490 | Single bulged A Not in a motif group | homologous IL_4V88_452 IL_37497.2 | |
| IL_6HCF_205 | 1/A1/1347:1349, 1/A1/1380:1382 | Isolated cWH basepair Not in a motif group | homologous IL_4V88_453 IL_51629.2 | |
| IL_6HCF_206 | 1/A1/1363:1365, 1/A1/1374:1375 | Minor groove platform Not in a motif group | homologous IL_4V88_454 IL_93353.1 | |
| IL_6HCF_207 | 1/A1/1395:1400, 1/A1/1446:1450 | Other IL Not in a motif group | geometric IL_4WF9_084 IL_05145.2 | |
| IL_6HCF_208 | 1/A1/1402:1405, 1/A1/1441:1444 | Minor groove platform Not in a motif group | homologous IL_4V88_456 IL_76458.1 | |
| IL_6HCF_209 | 1/A1/1536:1539, 1/A1/1594:1597 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_1D4R_001 IL_30621.2 | |
| IL_6HCF_210 | 1/A1/1550:1558, 1/A1/1577:1582 | No text annotation Not in a motif group | ||
| IL_6HCF_211 | 1/A1/1560:1562, 1/A1/1573:1575 | UU cWW water inserted Not in a motif group | geometric IL_4E48_002 IL_95997.1 | |
| IL_6HCF_212 | 1/A1/1604:1610, 1/A1/1629:1635 | No text annotation Not in a motif group | ||
| IL_6HCF_213 | 1/A1/1700:1702, 1/A1/1833:1836 | No text annotation Not in a motif group | homologous IL_4V88_463 IL_36143.3 | |
| IL_6HCF_214 | 1/A1/1702:1705, 1/A1/1829:1833 | No text annotation Not in a motif group | ||
| IL_6HCF_215 | 1/A1/1706:1708, 1/A1/1826:1828 | No text annotation Not in a motif group | geometric IL_4V88_465 IL_95997.1 | |
| IL_6HCF_216 | 1/A1/1708:1711, 1/A1/1822:1826 | No text annotation Not in a motif group | geometric IL_1CSL_001 IL_67743.1 | |
| IL_6HCF_217 | 1/A1/1713:1716, 1/A1/1817:1820 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_5TBW_100 IL_30621.2 | |
| IL_6HCF_218 | 1/A1/1717:1720, 1/A1/1813:1816 | Double sheared Not in a motif group | geometric IL_4V88_468 IL_09705.9 | |
| IL_6HCF_219 | 1/A1/1720:1722, 1/A1/1812:1813 | Single bulged U Not in a motif group | homologous IL_4V88_469 IL_83039.13 | |
| IL_6HCF_220 | 1/A1/1729:1731, 1/A1/1803:1805 | No text annotation Not in a motif group | homologous IL_4V88_470 IL_51629.2 | |
| IL_6HCF_221 | 1/A1/1732:1736, 1/A1/1798:1802 | Triple sheared Not in a motif group | geometric IL_7A0S_056 IL_41507.1 | |
| IL_6HCF_222 | 1/A1/1739:1741, 1/A1/1793:1795 | No text annotation Not in a motif group | geometric IL_3GM7_006 IL_95997.1 | |
| IL_6HCF_223 | 1/A1/1742:1746, 1/A1/1788:1792 | Triple sheared Not in a motif group | homologous IL_4V88_474 IL_56467.8 | |
| IL_6HCF_224 | 1/A1/1750:1754, 1/A1/1778:1784 | No text annotation Not in a motif group |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_6HCF_032 | No text annotation | ||
| IL_6HCF_154 | No text annotation | ||
| IL_6HCF_158 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J3_6HCF_001 | 1/52/112:116, 1/52/155:160, 1/52/275:278 | No text annotation Not in a motif group | ||
| J3_6HCF_002 | 1/52/982:986, 1/52/1068:1074, 1/52/1236:1273 | No text annotation Not in a motif group | ||
| J3_6HCF_003 | 1/52/1529:1537, 1/52/1622:1624, 1/52/1640:1645 | No text annotation Not in a motif group | ||
| J3_6HCF_004 | 1/52/1545:1548, 1/52/1580:1585, 1/52/1608:1614 | No text annotation Not in a motif group | ||
| J3_6HCF_005 | 1/52/2392:2400, 1/52/2804:2808, 1/52/2818:2823 | No text annotation Not in a motif group | ||
| J3_6HCF_006 | 1/52/4241:4243, 1/52/4267:4269, 1/52/4278:4283 | No text annotation Not in a motif group | homologous J3_5TBW_013 NA | |
| J3_6HCF_007 | 1/52/4462:4466, 1/52/4491:4494, 1/52/4506:4514 | No text annotation Not in a motif group | ||
| J3_6HCF_008 | 1/52/4968:4975, 1/52/4983:4991, 1/52/5060:5065 | No text annotation Not in a motif group | ||
| J3_6HCF_009 | 1/72/9:15, 1/72/64:67, 1/72/108:110 | No text annotation Not in a motif group | ||
| J3_6HCF_010 | 1/A1/40:41, 1/A1/481:487, 1/A1/512:514 | No text annotation Not in a motif group | ||
| J3_6HCF_011 | 1/A1/681:685, 1/A1/917:922, 1/A1/1022:1024 | No text annotation Not in a motif group | ||
| J3_6HCF_012 | 1/A1/938:941, 1/A1/985:993, 1/A1/1000:1004 | No text annotation Not in a motif group | ||
| J3_6HCF_013 | 1/A1/1091:1096, 1/A1/1136:1140, 1/A1/1147:1158 | No text annotation Not in a motif group | ||
| J3_6HCF_014 | 1/A1/1225:1228, 1/A1/1530:1532, 1/A1/1638:1641 | No text annotation Not in a motif group | ||
| J3_6HCF_015 | 1/A1/1236:1245, 1/A1/1254:1266, 1/A1/1516:1521 | No text annotation Not in a motif group | ||
| J3_6HCF_016 | 1/A1/1270:1277, 1/A1/1320:1324, 1/A1/1504:1512 | No text annotation Not in a motif group | ||
| J3_6HCF_017 | 1/A1/1340:1345, 1/A1/1384:1390, 1/A1/1480:1486 | No text annotation Not in a motif group | ||
| J3_6HCF_018 | 1/A1/1349:1351, 1/A1/1360:1363, 1/A1/1375:1380 | No text annotation Not in a motif group | ||
| J3_6HCF_019 | 1/A1/1532:1536, 1/A1/1597:1604, 1/A1/1635:1638 | No text annotation Not in a motif group | homologous J3_4V88_041 NA |
Problematic loops
No problematic loops
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