5MEI Internal, Hairpin and 3-way Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_5MEI_001 | 1/1/38:45 | No text annotation Not in a motif group | geometric HL_5TBW_001 HL_23481.5 | |
| HL_5MEI_002 | 1/1/69:74 | No text annotation Not in a motif group | homologous HL_5TBW_002 HL_96776.3 | |
| HL_5MEI_003 | 1/1/90:96 | No text annotation Not in a motif group | homologous HL_5TBW_003 HL_67216.5 | |
| HL_5MEI_004 | 1/1/132:136 | No text annotation Not in a motif group | homologous HL_5TBW_004 HL_36982.3 | |
| HL_5MEI_005 | 1/1/194:201 | T-loop with 1 bulged base Not in a motif group | homologous HL_5TBW_005 HL_68493.6 | |
| HL_5MEI_006 | 1/1/208:212 | No text annotation Not in a motif group | homologous HL_5TBW_006 HL_98557.5 | |
| HL_5MEI_007 | 1/1/216:224 | No text annotation Not in a motif group | homologous HL_5TBW_007 HL_08002.6 | |
| HL_5MEI_008 | 1/1/278:287 | No text annotation Not in a motif group | homologous HL_5TBW_008 HL_54035.7 | |
| HL_5MEI_010 | 1/1/357:362 | Other HL Not in a motif group | homologous HL_5TBW_010 HL_43074.18 | |
| HL_5MEI_011 | 1/1/382:387 | GNRA Not in a motif group | homologous HL_5TBW_011 HL_43074.18 | |
| HL_5MEI_012 | 1/1/541:550 | No text annotation Not in a motif group | homologous HL_5TBW_124 NA | |
| HL_5MEI_013 | 1/1/599:604 | GNRA Not in a motif group | homologous HL_5TBW_013 HL_43074.18 | |
| HL_5MEI_014 | 1/1/640:649 | T-loop with 2 stacked bulged bases Not in a motif group | homologous HL_5TBW_014 HL_33239.17 | |
| HL_5MEI_015 | 1/1/686:694 | No text annotation Not in a motif group | homologous HL_5TBW_015 HL_80105.3 | |
| HL_5MEI_016 | 1/1/707:712 | GNRA Not in a motif group | homologous HL_5TBW_016 HL_43074.18 | |
| HL_5MEI_017 | 1/1/732:737 | GNRA Not in a motif group | homologous HL_5TBW_017 HL_43074.18 | |
| HL_5MEI_022 | 1/1/958:963 | No text annotation Not in a motif group | homologous HL_5TBW_022 HL_15942.5 | |
| HL_5MEI_025 | 1/1/1126:1132 | GNRA Not in a motif group | homologous HL_5TBW_025 HL_43074.18 | |
| HL_5MEI_026 | 1/1/1148:1155 | No text annotation Not in a motif group | homologous HL_5TBW_026 HL_72451.5 | |
| HL_5MEI_030 | 1/1/1403:1408 | GNRA Not in a motif group | homologous HL_5TBW_030 HL_43074.18 | |
| HL_5MEI_061 | 1/1/2840:2848 | No text annotation Not in a motif group | homologous HL_5TBW_061 HL_36421.5 | |
| HL_5MEI_062 | 1/1/2897:2904 | No text annotation Not in a motif group | homologous HL_5TBW_062 HL_92681.5 | |
| HL_5MEI_063 | 1/1/2920:2926 | No text annotation Not in a motif group | homologous HL_5TBW_063 HL_26055.6 | |
| HL_5MEI_065 | 1/1/3025:3030 | GNRA Not in a motif group | homologous HL_5TBW_065 HL_43074.18 | |
| HL_5MEI_066 | 1/1/3068:3073 | Ribsomal LSU H95 Not in a motif group | homologous HL_5TBW_066 HL_67719.1 | |
| HL_5MEI_067 | 1/1/3110:3124 | No text annotation Not in a motif group | homologous HL_5TBW_067 HL_56677.5 | |
| HL_5MEI_068 | 1/1/3194:3197 | No text annotation Not in a motif group | geometric HL_5TBW_068 HL_46546.1 | |
| HL_5MEI_069 | 1/1/3240:3247 | No text annotation Not in a motif group | homologous HL_5TBW_069 HL_27757.1 | |
| HL_5MEI_070 | 1/1/3303:3311 | No text annotation Not in a motif group | homologous HL_5TBW_070 HL_05018.6 | |
| HL_5MEI_071 | 1/1/3350:3353 | No text annotation Not in a motif group | homologous HL_5TBW_071 HL_69353.7 | |
| HL_5MEI_072 | 1/3/36:41 | No text annotation Not in a motif group | geometric HL_5NFV_001 HL_58912.1 | |
| HL_5MEI_073 | 1/3/88:93 | GNRA Not in a motif group | homologous HL_5TBW_186 HL_43074.18 | |
| HL_5MEI_074 | 1/4/73:78 | Other HL Not in a motif group | homologous HL_5TBW_074 HL_02361.6 | |
| HL_5MEI_075 | 1/4/108:114 | No text annotation Not in a motif group | homologous HL_5TBW_075 HL_06569.2 | |
| HL_5MEI_076 | 1/4/124:129 | No text annotation Not in a motif group | homologous HL_5TBW_076 HL_60357.1 | |
| HL_5MEI_077 | 1/6/7:17 | No text annotation Not in a motif group | homologous HL_4V88_186 HL_67265.4 | |
| HL_5MEI_079 | 1/6/154:160 | Other HL Not in a motif group | homologous HL_4V88_188 HL_43074.18 | |
| HL_5MEI_081 | 1/6/243:250 | T-loop with 1 bulged base Not in a motif group | homologous HL_4V88_191 HL_68493.6 | |
| HL_5MEI_082 | 1/6/276:279 | No text annotation Not in a motif group | homologous HL_4V88_192 HL_69353.7 | |
| HL_5MEI_083 | 1/6/330:338 | No text annotation Not in a motif group | homologous HL_4V88_193 HL_93727.5 | |
| HL_5MEI_084 | 1/6/368:373 | No text annotation Not in a motif group | homologous HL_4V88_194 HL_18785.1 | |
| HL_5MEI_085 | 1/6/393:404 | No text annotation Not in a motif group | homologous HL_4V88_195 HL_22443.1 | |
| HL_5MEI_086 | 1/6/414:419 | UNCG Not in a motif group | homologous HL_4V88_196 HL_79299.11 | |
| HL_5MEI_087 | 1/6/450:456 | No text annotation Not in a motif group | homologous HL_4V88_197 HL_50374.1 | |
| HL_5MEI_089 | 1/6/520:532 | No text annotation Not in a motif group | geometric HL_4V88_199 HL_17086.2 | |
| HL_5MEI_090 | 1/6/569:574 | Other HL Not in a motif group | homologous HL_4V88_200 HL_43074.18 | |
| HL_5MEI_093 | 1/6/764:772 | No text annotation Not in a motif group | homologous HL_4V88_203 HL_72066.1 | |
| HL_5MEI_094 | 1/6/777:783 | No text annotation Not in a motif group | homologous HL_4V88_204 HL_83225.1 | |
| HL_5MEI_095 | 1/6/828:844 | No text annotation Not in a motif group | geometric HL_3SUX_001 HL_05123.2 | |
| HL_5MEI_096 | 1/6/900:909 | No text annotation Not in a motif group | homologous HL_4V88_206 HL_87219.4 | |
| HL_5MEI_097 | 1/6/937:942 | Other HL Not in a motif group | homologous HL_4V88_207 HL_43074.18 | |
| HL_5MEI_098 | 1/6/997:1007 | No text annotation Not in a motif group | homologous HL_4V88_208 HL_87219.4 | |
| HL_5MEI_099 | 1/6/1055:1064 | No text annotation Not in a motif group | homologous HL_4V88_209 HL_32255.1 | |
| HL_5MEI_100 | 1/6/1084:1089 | Other HL Not in a motif group | homologous HL_4V88_210 HL_43074.18 | |
| HL_5MEI_101 | 1/6/1121:1126 | GNRA Not in a motif group | homologous HL_4V88_211 HL_43074.18 | |
| HL_5MEI_102 | 1/6/1188:1197 | No text annotation Not in a motif group | homologous HL_4V88_212 HL_96854.1 | |
| HL_5MEI_103 | 1/6/1238:1247 | No text annotation Not in a motif group | homologous HL_4V88_213 HL_30819.1 | |
| HL_5MEI_104 | 1/6/1296:1301 | GNRA Not in a motif group | homologous HL_4V88_214 HL_43074.18 | |
| HL_5MEI_105 | 1/6/1309:1316 | No text annotation Not in a motif group | homologous HL_4V88_215 HL_54035.7 | |
| HL_5MEI_106 | 1/6/1359:1364 | No text annotation Not in a motif group | homologous HL_4V88_216 HL_82678.2 | |
| HL_5MEI_107 | 1/6/1396:1402 | No text annotation Not in a motif group | homologous HL_4V88_217 HL_67216.5 | |
| HL_5MEI_108 | 1/6/1501:1506 | GNRA Not in a motif group | homologous HL_4V88_218 HL_43074.18 | |
| HL_5MEI_109 | 1/6/1550:1561 | No text annotation Not in a motif group | homologous HL_4V88_219 HL_32458.3 | |
| HL_5MEI_110 | 1/6/1594:1602 | No text annotation Not in a motif group | homologous HL_4V88_220 HL_01181.4 | |
| HL_5MEI_112 | 1/6/1778:1783 | Other HL Not in a motif group | homologous HL_4V88_222 HL_43074.18 | |
| HL_5MEI_113 | 1/A/7:17 | No text annotation Not in a motif group | geometric HL_4V88_186 HL_67265.4 | |
| HL_5MEI_114 | 1/A/70:81 | No text annotation Not in a motif group | geometric HL_5TBW_006 HL_98557.5 | |
| HL_5MEI_115 | 1/A/154:160 | Other HL Not in a motif group | geometric HL_4V88_188 HL_43074.18 | |
| HL_5MEI_118 | 1/A/243:250 | T-loop with 1 bulged base Not in a motif group | geometric HL_4V88_191 HL_68493.6 | |
| HL_5MEI_119 | 1/A/274:282 | No text annotation Not in a motif group | ||
| HL_5MEI_120 | 1/A/330:338 | No text annotation Not in a motif group | geometric HL_4V88_193 HL_93727.5 | |
| HL_5MEI_121 | 1/A/368:373 | No text annotation Not in a motif group | geometric HL_4V88_194 HL_18785.1 | |
| HL_5MEI_122 | 1/A/393:404 | No text annotation Not in a motif group | geometric HL_4V88_195 HL_22443.1 | |
| HL_5MEI_123 | 1/A/414:419 | UNCG Not in a motif group | geometric HL_4V88_196 HL_79299.11 | |
| HL_5MEI_124 | 1/A/450:456 | No text annotation Not in a motif group | geometric HL_5NFV_001 HL_58912.1 | |
| HL_5MEI_125 | 1/A/485:502 | No text annotation Not in a motif group | ||
| HL_5MEI_126 | 1/A/520:532 | No text annotation Not in a motif group | geometric HL_4V88_199 HL_17086.2 | |
| HL_5MEI_127 | 1/A/569:574 | Other HL Not in a motif group | geometric HL_4V88_200 HL_43074.18 | |
| HL_5MEI_128 | 1/A/703:735 | No text annotation Not in a motif group | ||
| HL_5MEI_129 | 1/A/764:772 | No text annotation Not in a motif group | geometric HL_4V88_203 HL_72066.1 | |
| HL_5MEI_130 | 1/A/776:784 | No text annotation Not in a motif group | ||
| HL_5MEI_131 | 1/A/829:843 | No text annotation Not in a motif group | geometric HL_4V88_205 HL_03603.1 | |
| HL_5MEI_132 | 1/A/900:909 | No text annotation Not in a motif group | geometric HL_4V88_206 HL_87219.4 | |
| HL_5MEI_133 | 1/A/937:942 | Other HL Not in a motif group | geometric HL_4V88_207 HL_43074.18 | |
| HL_5MEI_134 | 1/A/997:1007 | No text annotation Not in a motif group | geometric HL_4V88_208 HL_87219.4 | |
| HL_5MEI_135 | 1/A/1055:1064 | No text annotation Not in a motif group | ||
| HL_5MEI_136 | 1/A/1084:1089 | Other HL Not in a motif group | geometric HL_4V88_210 HL_43074.18 | |
| HL_5MEI_137 | 1/A/1121:1126 | GNRA Not in a motif group | geometric HL_4LFB_020 HL_43074.18 | |
| HL_5MEI_138 | 1/A/1188:1197 | No text annotation Not in a motif group | geometric HL_4V88_212 HL_96854.1 | |
| HL_5MEI_139 | 1/A/1238:1247 | No text annotation Not in a motif group | geometric HL_4V88_213 HL_30819.1 | |
| HL_5MEI_140 | 1/A/1296:1301 | GNRA Not in a motif group | geometric HL_4V88_214 HL_43074.18 | |
| HL_5MEI_141 | 1/A/1309:1316 | No text annotation Not in a motif group | geometric HL_4V88_215 HL_54035.7 | |
| HL_5MEI_142 | 1/A/1359:1364 | No text annotation Not in a motif group | ||
| HL_5MEI_143 | 1/A/1396:1402 | No text annotation Not in a motif group | geometric HL_5J7L_026 HL_68304.6 | |
| HL_5MEI_144 | 1/A/1501:1506 | GNRA Not in a motif group | geometric HL_4V88_211 HL_43074.18 | |
| HL_5MEI_145 | 1/A/1550:1561 | No text annotation Not in a motif group | geometric HL_4V88_219 HL_32458.3 | |
| HL_5MEI_146 | 1/A/1594:1602 | No text annotation Not in a motif group | geometric HL_4V88_220 HL_01181.4 | |
| HL_5MEI_148 | 1/A/1778:1783 | Other HL Not in a motif group | geometric HL_4V88_222 HL_43074.18 | |
| HL_5MEI_149 | 1/AR/38:45 | No text annotation Not in a motif group | homologous HL_5TBW_001 HL_23481.5 | |
| HL_5MEI_150 | 1/AR/69:74 | No text annotation Not in a motif group | homologous HL_5TBW_002 HL_96776.3 | |
| HL_5MEI_151 | 1/AR/90:96 | No text annotation Not in a motif group | homologous HL_5TBW_003 HL_67216.5 | |
| HL_5MEI_152 | 1/AR/132:136 | No text annotation Not in a motif group | homologous HL_5TBW_004 HL_36982.3 | |
| HL_5MEI_153 | 1/AR/194:201 | T-loop with 1 bulged base Not in a motif group | homologous HL_5TBW_005 HL_68493.6 | |
| HL_5MEI_154 | 1/AR/208:212 | No text annotation Not in a motif group | homologous HL_5TBW_006 HL_98557.5 | |
| HL_5MEI_155 | 1/AR/216:224 | No text annotation Not in a motif group | homologous HL_5TBW_007 HL_08002.6 | |
| HL_5MEI_156 | 1/AR/278:287 | No text annotation Not in a motif group | homologous HL_5TBW_008 HL_54035.7 | |
| HL_5MEI_157 | 1/AR/303:312 | No text annotation Not in a motif group | homologous HL_5TBW_009 HL_46142.8 | |
| HL_5MEI_158 | 1/AR/357:362 | Other HL Not in a motif group | homologous HL_5TBW_010 HL_43074.18 | |
| HL_5MEI_159 | 1/AR/382:387 | GNRA Not in a motif group | homologous HL_5TBW_011 HL_43074.18 | |
| HL_5MEI_160 | 1/AR/541:550 | No text annotation Not in a motif group | homologous HL_5TBW_124 NA | |
| HL_5MEI_161 | 1/AR/599:604 | GNRA Not in a motif group | homologous HL_5TBW_013 HL_43074.18 | |
| HL_5MEI_162 | 1/AR/640:649 | T-loop with 2 stacked bulged bases Not in a motif group | homologous HL_5TBW_014 HL_33239.17 | |
| HL_5MEI_163 | 1/AR/686:694 | No text annotation Not in a motif group | homologous HL_5TBW_015 HL_80105.3 | |
| HL_5MEI_164 | 1/AR/707:712 | GNRA Not in a motif group | homologous HL_5TBW_016 HL_43074.18 | |
| HL_5MEI_165 | 1/AR/732:737 | GNRA Not in a motif group | homologous HL_5TBW_017 HL_43074.18 | |
| HL_5MEI_166 | 1/AR/763:768 | No text annotation Not in a motif group | geometric HL_5TBW_018 HL_00996.1 | |
| HL_5MEI_167 | 1/AR/844:849 | GNRA Not in a motif group | homologous HL_5TBW_019 HL_43074.18 | |
| HL_5MEI_168 | 1/AR/876:885 | No text annotation Not in a motif group | homologous HL_5TBW_020 HL_39334.5 | |
| HL_5MEI_169 | 1/AR/910:918 | No text annotation Not in a motif group | ||
| HL_5MEI_170 | 1/AR/958:963 | No text annotation Not in a motif group | homologous HL_5TBW_022 HL_15942.5 | |
| HL_5MEI_171 | 1/AR/1023:1029 | GNRA Not in a motif group | homologous HL_5TBW_023 HL_43074.18 | |
| HL_5MEI_172 | 1/AR/1076:1083 | No text annotation Not in a motif group | homologous HL_5TBW_024 HL_54035.7 | |
| HL_5MEI_173 | 1/AR/1126:1132 | GNRA Not in a motif group | homologous HL_5TBW_025 HL_43074.18 | |
| HL_5MEI_174 | 1/AR/1148:1155 | No text annotation Not in a motif group | homologous HL_5TBW_026 HL_72451.5 | |
| HL_5MEI_175 | 1/AR/1238:1250 | No text annotation Not in a motif group | ||
| HL_5MEI_176 | 1/AR/1267:1274 | No text annotation Not in a motif group | geometric HL_1MMS_002 HL_93727.5 | |
| HL_5MEI_177 | 1/AR/1347:1357 | No text annotation Not in a motif group | homologous HL_5TBW_029 HL_36095.1 | |
| HL_5MEI_178 | 1/AR/1403:1408 | GNRA Not in a motif group | homologous HL_5TBW_030 HL_43074.18 | |
| HL_5MEI_179 | 1/AR/1462:1470 | T-loop with 2 stacked bulged bases Not in a motif group | homologous HL_5TBW_031 HL_33239.17 | |
| HL_5MEI_180 | 1/AR/1506:1512 | No text annotation Not in a motif group | homologous HL_5TBW_032 HL_86880.5 | |
| HL_5MEI_181 | 1/AR/1544:1549 | Other HL Not in a motif group | homologous HL_5TBW_033 HL_43074.18 | |
| HL_5MEI_183 | 1/AR/1599:1608 | No text annotation Not in a motif group | homologous HL_5TBW_035 HL_78457.4 | |
| HL_5MEI_184 | 1/AR/1634:1639 | GNRA Not in a motif group | homologous HL_5TBW_036 HL_43074.18 | |
| HL_5MEI_185 | 1/AR/1680:1688 | No text annotation Not in a motif group | homologous HL_5TBW_037 HL_73793.2 | |
| HL_5MEI_186 | 1/AR/1719:1725 | No text annotation Not in a motif group | homologous HL_5TBW_038 HL_00923.1 | |
| HL_5MEI_187 | 1/AR/1758:1767 | No text annotation Not in a motif group | ||
| HL_5MEI_188 | 1/AR/1792:1796 | No text annotation Not in a motif group | homologous HL_5TBW_040 HL_69353.7 | |
| HL_5MEI_189 | 1/AR/1844:1851 | No text annotation Not in a motif group | homologous HL_5TBW_041 HL_66171.3 | |
| HL_5MEI_190 | 1/AR/1862:1868 | GNRA with one bulged base Not in a motif group | homologous HL_5TBW_042 HL_02361.6 | |
| HL_5MEI_191 | 1/AR/1923:1928 | No text annotation Not in a motif group | geometric HL_7RQB_042 HL_79299.11 | |
| HL_5MEI_193 | 1/AR/2110:2114 | No text annotation Not in a motif group | homologous HL_5TBW_045 HL_99223.1 | |
| HL_5MEI_194 | 1/AR/2135:2145 | No text annotation Not in a motif group | homologous HL_5TBW_046 HL_43613.4 | |
| HL_5MEI_195 | 1/AR/2164:2170 | GNRA Not in a motif group | homologous HL_5TBW_047 HL_43074.18 | |
| HL_5MEI_196 | 1/AR/2220:2225 | Other HL Not in a motif group | homologous HL_5TBW_048 HL_43074.18 | |
| HL_5MEI_197 | 1/AR/2253:2263 | No text annotation Not in a motif group | homologous HL_5TBW_049 HL_98248.1 | |
| HL_5MEI_198 | 1/AR/2292:2300 | No text annotation Not in a motif group | homologous HL_5TBW_050 HL_53760.4 | |
| HL_5MEI_199 | 1/AR/2369:2378 | No text annotation Not in a motif group | homologous HL_5TBW_051 HL_90642.5 | |
| HL_5MEI_201 | 1/AR/2534:2545 | No text annotation Not in a motif group | homologous HL_5TBW_165 NA | |
| HL_5MEI_202 | 1/AR/2568:2573 | No text annotation Not in a motif group | homologous HL_5TBW_053 HL_67205.1 | |
| HL_5MEI_203 | 1/AR/2616:2624 | No text annotation Not in a motif group | homologous HL_5TBW_054 HL_46891.3 | |
| HL_5MEI_204 | 1/AR/2633:2645 | No text annotation Not in a motif group | homologous HL_5TBW_055 HL_19870.5 | |
| HL_5MEI_205 | 1/AR/2673:2681 | No text annotation Not in a motif group | homologous HL_5TBW_056 HL_76406.3 | |
| HL_5MEI_206 | 1/AR/2693:2700 | No text annotation Not in a motif group | homologous HL_5TBW_057 HL_46142.8 | |
| HL_5MEI_207 | 1/AR/2724:2732 | No text annotation Not in a motif group | homologous HL_5TBW_058 HL_14725.1 | |
| HL_5MEI_208 | 1/AR/2744:2749 | GNRA Not in a motif group | homologous HL_5TBW_059 HL_43074.18 | |
| HL_5MEI_209 | 1/AR/2776:2784 | No text annotation Not in a motif group | homologous HL_5TBW_060 HL_46142.8 | |
| HL_5MEI_210 | 1/AR/2840:2848 | No text annotation Not in a motif group | homologous HL_5TBW_061 HL_36421.5 | |
| HL_5MEI_211 | 1/AR/2897:2904 | No text annotation Not in a motif group | homologous HL_5TBW_062 HL_92681.5 | |
| HL_5MEI_212 | 1/AR/2920:2926 | No text annotation Not in a motif group | geometric HL_5TBW_063 HL_26055.6 | |
| HL_5MEI_213 | 1/AR/2963:2968 | GNRA Not in a motif group | homologous HL_5TBW_064 HL_43074.18 | |
| HL_5MEI_214 | 1/AR/3025:3030 | GNRA Not in a motif group | geometric HL_4V9F_023 HL_43074.18 | |
| HL_5MEI_215 | 1/AR/3068:3073 | Ribsomal LSU H95 Not in a motif group | homologous HL_5TBW_066 HL_67719.1 | |
| HL_5MEI_216 | 1/AR/3110:3124 | No text annotation Not in a motif group | homologous HL_5TBW_067 HL_56677.5 | |
| HL_5MEI_217 | 1/AR/3194:3197 | No text annotation Not in a motif group | homologous HL_5TBW_068 HL_46546.1 | |
| HL_5MEI_218 | 1/AR/3240:3247 | No text annotation Not in a motif group | homologous HL_5TBW_069 HL_27757.1 | |
| HL_5MEI_219 | 1/AR/3303:3311 | No text annotation Not in a motif group | homologous HL_5TBW_070 HL_05018.6 | |
| HL_5MEI_220 | 1/AR/3350:3353 | No text annotation Not in a motif group | geometric HL_5TBW_071 HL_69353.7 | |
| HL_5MEI_221 | 1/AS/36:41 | No text annotation Not in a motif group | homologous HL_5TBW_185 HL_02733.5 | |
| HL_5MEI_222 | 1/AS/88:93 | GNRA Not in a motif group | homologous HL_5TBW_186 HL_43074.18 | |
| HL_5MEI_223 | 1/AT/69:89 | No text annotation Not in a motif group | ||
| HL_5MEI_224 | 1/AT/108:114 | No text annotation Not in a motif group | homologous HL_5TBW_075 HL_06569.2 | |
| HL_5MEI_225 | 1/AT/124:129 | No text annotation Not in a motif group | homologous HL_5TBW_076 HL_60357.1 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_5MEI_009 | No text annotation | ||
| HL_5MEI_018 | No text annotation | ||
| HL_5MEI_019 | GNRA | ||
| HL_5MEI_020 | No text annotation | ||
| HL_5MEI_021 | No text annotation | ||
| HL_5MEI_023 | GNRA | ||
| HL_5MEI_024 | No text annotation | ||
| HL_5MEI_027 | No text annotation | ||
| HL_5MEI_028 | No text annotation | ||
| HL_5MEI_029 | No text annotation | ||
| HL_5MEI_031 | T-loop with 2 stacked bulged bases | ||
| HL_5MEI_032 | No text annotation | ||
| HL_5MEI_033 | Other HL | ||
| HL_5MEI_034 | No text annotation | ||
| HL_5MEI_035 | No text annotation | ||
| HL_5MEI_036 | GNRA | ||
| HL_5MEI_037 | No text annotation | ||
| HL_5MEI_038 | No text annotation | ||
| HL_5MEI_039 | No text annotation | ||
| HL_5MEI_040 | No text annotation | ||
| HL_5MEI_041 | No text annotation | ||
| HL_5MEI_042 | GNRA with one bulged base | ||
| HL_5MEI_043 | UNCG | ||
| HL_5MEI_044 | No text annotation | ||
| HL_5MEI_045 | No text annotation | ||
| HL_5MEI_046 | No text annotation | ||
| HL_5MEI_047 | GNRA | ||
| HL_5MEI_048 | Other HL | ||
| HL_5MEI_049 | No text annotation | ||
| HL_5MEI_050 | No text annotation | ||
| HL_5MEI_051 | No text annotation | ||
| HL_5MEI_052 | No text annotation | ||
| HL_5MEI_053 | No text annotation | ||
| HL_5MEI_054 | No text annotation | ||
| HL_5MEI_055 | No text annotation | ||
| HL_5MEI_056 | No text annotation | ||
| HL_5MEI_057 | No text annotation | ||
| HL_5MEI_058 | No text annotation | ||
| HL_5MEI_059 | GNRA | ||
| HL_5MEI_060 | No text annotation | ||
| HL_5MEI_064 | GNRA | ||
| HL_5MEI_078 | No text annotation | ||
| HL_5MEI_080 | No text annotation | ||
| HL_5MEI_088 | No text annotation | ||
| HL_5MEI_091 | No text annotation | ||
| HL_5MEI_092 | No text annotation | ||
| HL_5MEI_111 | No text annotation | ||
| HL_5MEI_116 | No text annotation | ||
| HL_5MEI_117 | No text annotation | ||
| HL_5MEI_147 | No text annotation | ||
| HL_5MEI_182 | No text annotation | ||
| HL_5MEI_192 | No text annotation | ||
| HL_5MEI_200 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_5MEI_001 | 1/1/3:4, 1/4/155:156 | No text annotation Not in a motif group | ||
| IL_5MEI_002 | 1/1/7:8, 1/4/150:152 | Single bulged C Not in a motif group | homologous IL_5TBW_002 IL_61258.10 | |
| IL_5MEI_003 | 1/1/13:15, 1/4/144:145 | Single bulged U Not in a motif group | homologous IL_5TBW_003 IL_83039.11 | |
| IL_5MEI_004 | 1/1/27:28, 1/1/56:58 | Single stack bend Not in a motif group | homologous IL_5TBW_004 IL_04038.4 | |
| IL_5MEI_005 | 1/1/31:38, 1/1/45:53 | tSH-tHW-tHH-tHS Not in a motif group | homologous IL_5TBW_005 IL_22863.1 | |
| IL_5MEI_006 | 1/1/82:89, 1/1/97:103 | No text annotation Not in a motif group | homologous IL_5TBW_006 IL_29509.1 | |
| IL_5MEI_007 | 1/1/123:124, 1/1/144:149 | No text annotation Not in a motif group | homologous IL_5TBW_007 IL_19724.1 | |
| IL_5MEI_008 | 1/1/125:127, 1/1/141:143 | No text annotation Not in a motif group | homologous IL_5TBW_008 IL_01312.13 | |
| IL_5MEI_009 | 1/1/163:165, 1/1/257:258 | Single stack bend Not in a motif group | homologous IL_5TBW_009 IL_04038.4 | |
| IL_5MEI_010 | 1/1/169:170, 1/1/248:253 | No text annotation Not in a motif group | homologous IL_5TBW_010 IL_76195.1 | |
| IL_5MEI_011 | 1/1/177:179, 1/1/237:241 | Major groove platform with extra pair Not in a motif group | homologous IL_5TBW_011 IL_87630.5 | |
| IL_5MEI_012 | 1/1/189:191, 1/1/204:205 | Single bulged U Not in a motif group | homologous IL_5TBW_012 IL_83039.11 | |
| IL_5MEI_013 | 1/1/337:339, 1/4/25:26 | Single bulged A Not in a motif group | homologous IL_5TBW_013 IL_80007.16 | |
| IL_5MEI_014 | 1/1/376:379, 1/1/390:403 | No text annotation Not in a motif group | homologous IL_5TBW_014 IL_60992.5 | |
| IL_5MEI_015 | 1/1/404:410, 1/4/13:19 | Triple sheared with non-canonical cWW Not in a motif group | homologous IL_5TBW_015 IL_66414.5 | |
| IL_5MEI_016 | 1/1/429:431, 1/1/628:630 | No text annotation Not in a motif group | homologous IL_5TBW_016 IL_01312.13 | |
| IL_5MEI_018 | 1/1/512:513, 1/1/577:579 | Single bulged A Not in a motif group | homologous IL_5TBW_018 IL_40508.4 | |
| IL_5MEI_019 | 1/1/517:525, 1/1/567:573 | No text annotation Not in a motif group | homologous IL_5TBW_019 IL_41593.1 | |
| IL_5MEI_020 | 1/1/531:538, 1/1/553:561 | No text annotation Not in a motif group | homologous IL_5TBW_020 IL_94501.1 | |
| IL_5MEI_021 | 1/1/668:670, 1/1/792:794 | No text annotation Not in a motif group | homologous IL_5TBW_021 IL_01312.13 | |
| IL_5MEI_022 | 1/1/680:684, 1/1/696:700 | No text annotation Not in a motif group | homologous IL_5TBW_022 IL_92343.1 | |
| IL_5MEI_023 | 1/1/725:728, 1/1/741:745 | UAA/GAN Not in a motif group | homologous IL_5TBW_023 IL_53523.5 | |
| IL_5MEI_024 | 1/1/752:753, 1/1/779:781 | Single bulged A Not in a motif group | homologous IL_5TBW_024 IL_80007.16 | |
| IL_5MEI_025 | 1/1/755:756, 1/1/775:777 | Single bulged U Not in a motif group | homologous IL_5TBW_025 IL_83039.11 | |
| IL_5MEI_027 | 1/1/803:805, 1/1/938:940 | No text annotation Not in a motif group | homologous IL_5TBW_027 IL_01312.13 | |
| IL_5MEI_028 | 1/1/805:809, 1/1/931:938 | No text annotation Not in a motif group | geometric IL_5TBW_028 IL_17470.5 | |
| IL_5MEI_034 | 1/1/954:956, 1/1/965:967 | No text annotation Not in a motif group | homologous IL_5TBW_034 IL_01312.13 | |
| IL_5MEI_035 | 1/1/969:970, 1/1/1111:1113 | Single stack bend Not in a motif group | homologous IL_5TBW_035 IL_04038.4 | |
| IL_5MEI_036 | 1/1/977:981, 1/1/1102:1104 | No text annotation Not in a motif group | homologous IL_5TBW_036 IL_67474.3 | |
| IL_5MEI_037 | 1/1/983:985, 1/1/1099:1100 | Single bulged G Not in a motif group | homologous IL_5TBW_037 IL_59137.10 | |
| IL_5MEI_046 | 1/1/1120:1122, 1/1/1136:1138 | No text annotation Not in a motif group | homologous IL_5TBW_046 IL_01312.13 | |
| IL_5MEI_047 | 1/1/1123:1125, 1/1/1133:1135 | Isolated cWS basepair Not in a motif group | homologous IL_5TBW_047 IL_67621.5 | |
| IL_5MEI_048 | 1/1/1167:1171, 1/1/1328:1332 | UAA/GAN Not in a motif group | homologous IL_5TBW_048 IL_53523.5 | |
| IL_5MEI_049 | 1/1/1173:1180, 1/1/1325:1326 | SSU/LSU pseudoknot Not in a motif group | homologous IL_5TBW_049 IL_15861.6 | |
| IL_5MEI_050 | 1/1/1180:1182, 1/1/1324:1325 | Single bulged U Not in a motif group | geometric IL_5TBW_050 IL_83039.11 | |
| IL_5MEI_051 | 1/1/1187:1194, 1/1/1314:1319 | No text annotation Not in a motif group | homologous IL_5TBW_051 IL_17971.1 | |
| IL_5MEI_052 | 1/1/1194:1205, 1/1/1299:1314 | No text annotation Not in a motif group | geometric IL_5TBW_052 IL_94878.1 | |
| IL_5MEI_053 | 1/1/1207:1209, 1/1/1296:1297 | Single bulged U Not in a motif group | homologous IL_5TBW_053 IL_83039.11 | |
| IL_5MEI_054 | 1/1/1218:1226, 1/1/1283:1287 | Kink-turn Not in a motif group | homologous IL_5TBW_054 IL_90538.3 | |
| IL_5MEI_057 | 1/1/1376:1378, 1/1/1428:1431 | Isolated cWS basepair Not in a motif group | homologous IL_5TBW_057 IL_01312.13 | |
| IL_5MEI_058 | 1/1/1385:1387, 1/1/1420:1421 | Single bulged A Not in a motif group | homologous IL_5TBW_058 IL_80007.16 | |
| IL_5MEI_059 | 1/1/1388:1395, 1/1/1415:1419 | Kink-turn Not in a motif group | homologous IL_5TBW_059 IL_29549.9 | |
| IL_5MEI_060 | 1/1/1398:1400, 1/1/1411:1412 | Single bulged A Not in a motif group | homologous IL_5TBW_060 IL_80007.16 | |
| IL_5MEI_061 | 1/1/1444:1450, 1/1/2354:2359 | 7x6 Sarcin-Ricin; G-bulge Not in a motif group | homologous IL_5TBW_061 IL_35110.5 | |
| IL_5MEI_091 | 1/1/2391:2394, 1/1/2986:2988 | Major groove platform with extra pair Not in a motif group | homologous IL_5TBW_091 IL_87630.5 | |
| IL_5MEI_103 | 1/1/2824:2826, 1/1/2863:2865 | No text annotation Not in a motif group | geometric IL_5TBW_103 IL_05265.1 | |
| IL_5MEI_104 | 1/1/2826:2828, 1/1/2862:2863 | Major groove platform Not in a motif group | homologous IL_5TBW_104 IL_80663.10 | |
| IL_5MEI_105 | 1/1/2828:2830, 1/1/2858:2862 | No text annotation Not in a motif group | geometric IL_5TBW_105 IL_07931.5 | |
| IL_5MEI_106 | 1/1/2835:2839, 1/1/2849:2853 | Triple sheared Not in a motif group | homologous IL_5TBW_106 IL_56467.6 | |
| IL_5MEI_107 | 1/1/2876:2877, 1/1/2949:2951 | Major groove platform Not in a motif group | homologous IL_5TBW_107 IL_80663.10 | |
| IL_5MEI_108 | 1/1/2879:2881, 1/1/2943:2947 | Isolated non-canonical cWW with bulges Not in a motif group | homologous IL_5TBW_108 IL_01312.13 | |
| IL_5MEI_109 | 1/1/2881:2882, 1/1/2940:2943 | Multiple bulged bases Not in a motif group | geometric IL_5TBW_109 IL_13730.12 | |
| IL_5MEI_110 | 1/1/2889:2891, 1/1/2912:2914 | No text annotation Not in a motif group | geometric IL_5TBW_110 IL_01312.13 | |
| IL_5MEI_111 | 1/1/2891:2892, 1/1/2909:2912 | Minor groove platform with intercalation Not in a motif group | homologous IL_5TBW_111 IL_95601.1 | |
| IL_5MEI_112 | 1/1/2918:2920, 1/1/2926:2928 | No text annotation Not in a motif group | geometric IL_5TBW_112 IL_01312.13 | |
| IL_5MEI_114 | 1/1/3004:3007, 1/1/3139:3144 | Double sheared Not in a motif group | homologous IL_5TBW_114 IL_09705.7 | |
| IL_5MEI_115 | 1/1/3012:3014, 1/1/3040:3042 | No text annotation Not in a motif group | homologous IL_5TBW_115 IL_01312.13 | |
| IL_5MEI_116 | 1/1/3018:3025, 1/1/3030:3036 | 8x7 Sarcin-Ricin; G-bulge Not in a motif group | geometric IL_5TBW_116 IL_04346.5 | |
| IL_5MEI_117 | 1/1/3047:3051, 1/1/3091:3094 | Major groove minor groove platform with tHH Not in a motif group | homologous IL_5TBW_117 IL_28060.3 | |
| IL_5MEI_118 | 1/1/3054:3059, 1/1/3084:3088 | UAA/GAN related Not in a motif group | homologous IL_5TBW_118 IL_53523.5 | |
| IL_5MEI_119 | 1/1/3063:3064, 1/1/3077:3080 | Multiple bulged bases Not in a motif group | homologous IL_5TBW_119 IL_13730.12 | |
| IL_5MEI_120 | 1/1/3103:3107, 1/1/3127:3131 | UAA/GAN Not in a motif group | homologous IL_5TBW_120 IL_53523.5 | |
| IL_5MEI_121 | 1/1/3162:3166, 1/1/3284:3288 | No text annotation Not in a motif group | homologous IL_5TBW_121 IL_05867.1 | |
| IL_5MEI_123 | 1/1/3177:3179, 1/1/3210:3211 | Single bulged A Not in a motif group | homologous IL_5TBW_123 IL_80007.16 | |
| IL_5MEI_124 | 1/1/3179:3188, 1/1/3204:3210 | No text annotation Not in a motif group | geometric IL_5TBW_124 IL_56867.1 | |
| IL_5MEI_125 | 1/1/3193:3194, 1/1/3197:3199 | Single bulged U Not in a motif group | homologous IL_5TBW_125 IL_83039.11 | |
| IL_5MEI_126 | 1/1/3225:3229, 1/1/3258:3260 | No text annotation Not in a motif group | homologous IL_5TBW_126 IL_50789.1 | |
| IL_5MEI_127 | 1/1/3233:3235, 1/1/3252:3254 | No text annotation Not in a motif group | geometric IL_5TBW_127 IL_01312.13 | |
| IL_5MEI_128 | 1/1/3235:3238, 1/1/3249:3252 | Tandem non-canonical cWW pairs Not in a motif group | homologous IL_5TBW_128 IL_85877.10 | |
| IL_5MEI_129 | 1/1/3300:3303, 1/1/3311:3314 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_5TBW_129 IL_85877.10 | |
| IL_5MEI_130 | 1/1/3318:3320, 1/1/3387:3388 | Single bulged U Not in a motif group | geometric IL_5TBW_130 IL_83039.11 | |
| IL_5MEI_131 | 1/1/3324:3325, 1/1/3381:3383 | Single bulged U Not in a motif group | homologous IL_5TBW_131 IL_21340.1 | |
| IL_5MEI_132 | 1/1/3328:3330, 1/1/3373:3378 | Isolated non-canonical cWW with bulges Not in a motif group | homologous IL_5TBW_132 IL_55456.1 | |
| IL_5MEI_133 | 1/1/3332:3337, 1/1/3367:3371 | No text annotation Not in a motif group | homologous IL_5TBW_133 IL_47002.1 | |
| IL_5MEI_134 | 1/1/3340:3342, 1/1/3363:3364 | Single bulged U Not in a motif group | geometric IL_5TBW_134 IL_83039.11 | |
| IL_5MEI_135 | 1/1/3342:3345, 1/1/3360:3363 | tWS-tSW Not in a motif group | geometric IL_5TBW_135 IL_09705.7 | |
| IL_5MEI_136 | 1/1/3345:3347, 1/1/3358:3360 | No text annotation Not in a motif group | geometric IL_7A0S_031 IL_01312.13 | |
| IL_5MEI_137 | 1/1/3349:3350, 1/1/3353:3356 | Multiple bulged bases Not in a motif group | geometric IL_5TBW_136 IL_13730.12 | |
| IL_5MEI_138 | 1/3/15:16, 1/3/63:65 | Single bulged A Not in a motif group | homologous IL_5TBW_372 IL_80007.16 | |
| IL_5MEI_139 | 1/3/21:27, 1/3/53:58 | No text annotation Not in a motif group | homologous IL_5TBW_373 IL_05523.1 | |
| IL_5MEI_140 | 1/3/28:29, 1/3/49:52 | Minor groove platform Not in a motif group | homologous IL_5TBW_374 IL_94431.4 | |
| IL_5MEI_141 | 1/3/29:30, 1/3/47:49 | Single stack bend Not in a motif group | geometric IL_5TBW_375 IL_04038.4 | |
| IL_5MEI_142 | 1/3/32:36, 1/3/41:45 | Symmetric double minor groove platform Not in a motif group | homologous IL_5TBW_376 IL_58103.5 | |
| IL_5MEI_143 | 1/3/72:80, 1/3/100:106 | 8x7 Sarcin-Ricin; G-bulge Not in a motif group | homologous IL_5TBW_377 IL_04346.5 | |
| IL_5MEI_144 | 1/3/84:87, 1/3/94:96 | No text annotation Not in a motif group | homologous IL_5TBW_378 IL_01312.13 | |
| IL_5MEI_145 | 1/4/44:64, 1/4/96:100 | No text annotation Not in a motif group | geometric IL_5TBW_144 IL_23735.1 | |
| IL_5MEI_146 | 1/4/64:66, 1/4/93:96 | Isolated non-canonical cWW with bulges Not in a motif group | homologous IL_5TBW_145 IL_55456.1 | |
| IL_5MEI_147 | 1/4/68:69, 1/4/89:91 | Single bulged U Not in a motif group | homologous IL_5TBW_146 IL_83039.11 | |
| IL_5MEI_148 | 1/4/69:73, 1/4/78:89 | No text annotation Not in a motif group | geometric IL_5TBW_147 IL_39287.1 | |
| IL_5MEI_149 | 1/6/24:26, 1/6/600:601 | Single bulged C Not in a motif group | homologous IL_4V88_384 IL_61258.10 | |
| IL_5MEI_150 | 1/6/35:37, 1/6/471:473 | UC cWW Not in a motif group | geometric IL_4V88_385 IL_01312.13 | |
| IL_5MEI_151 | 1/6/37:41, 1/6/466:471 | No text annotation Not in a motif group | geometric IL_4V88_386 IL_53318.1 | |
| IL_5MEI_152 | 1/6/42:48, 1/6/431:433 | No text annotation Not in a motif group | geometric IL_4V88_387 IL_34626.4 | |
| IL_5MEI_153 | 1/6/50:52, 1/6/428:429 | Minor groove platform Not in a motif group | homologous IL_4V88_388 IL_06437.11 | |
| IL_5MEI_154 | 1/6/58:63, 1/6/87:89 | No text annotation Not in a motif group | geometric IL_4V88_389 IL_96451.1 | |
| IL_5MEI_155 | 1/6/63:69, 1/6/82:87 | No text annotation Not in a motif group | ||
| IL_5MEI_156 | 1/6/109:112, 1/6/302:305 | Tandem non-canonical cWW pairs Not in a motif group | homologous IL_4V88_391 IL_85877.10 | |
| IL_5MEI_157 | 1/6/113:116, 1/6/300:301 | Multiple bulged bases Not in a motif group | homologous IL_4V88_392 IL_13730.12 | |
| IL_5MEI_158 | 1/6/117:122, 1/6/295:299 | No text annotation Not in a motif group | homologous IL_4V88_393 IL_76386.1 | |
| IL_5MEI_159 | 1/6/143:149, 1/6/165:172 | tWH-tWH-tHW-tHW Not in a motif group | homologous IL_4V88_394 IL_92440.5 | |
| IL_5MEI_160 | 1/6/150:152, 1/6/162:164 | No text annotation Not in a motif group | homologous IL_4V88_395 IL_87880.2 | |
| IL_5MEI_162 | 1/6/204:206, 1/6/259:263 | Major groove platform with extra cWW Not in a motif group | homologous IL_4V88_397 IL_95485.6 | |
| IL_5MEI_163 | 1/6/206:208, 1/6/257:259 | No text annotation Not in a motif group | geometric IL_4V88_398 IL_01312.13 | |
| IL_5MEI_164 | 1/6/213:243, 1/6/250:252 | No text annotation Not in a motif group | ||
| IL_5MEI_165 | 1/6/265:267, 1/6/288:289 | Single bulged A Not in a motif group | homologous IL_4V88_399 IL_80007.16 | |
| IL_5MEI_166 | 1/6/270:273, 1/6/283:285 | No text annotation Not in a motif group | homologous IL_4V88_400 IL_05922.1 | |
| IL_5MEI_167 | 1/6/275:276, 1/6/279:281 | Single bulged U Not in a motif group | geometric IL_4V88_401 IL_83039.11 | |
| IL_5MEI_168 | 1/6/311:316, 1/6/348:355 | Kink-turn with non-sequential stacking Not in a motif group | homologous IL_4V88_402 IL_29549.9 | |
| IL_5MEI_169 | 1/6/318:323, 1/6/345:346 | No text annotation Not in a motif group | homologous IL_4V88_403 IL_55658.1 | |
| IL_5MEI_170 | 1/6/363:365, 1/6/376:381 | No text annotation Not in a motif group | homologous IL_4V88_404 IL_46732.1 | |
| IL_5MEI_171 | 1/6/389:391, 1/6/406:408 | Isolated cWH basepair Not in a motif group | homologous IL_4V88_405 IL_42589.6 | |
| IL_5MEI_172 | 1/6/411:413, 1/6/420:422 | Isolated near basepair Not in a motif group | homologous IL_4V88_406 IL_01312.13 | |
| IL_5MEI_173 | 1/6/439:441, 1/6/463:464 | Single bulged U Not in a motif group | geometric IL_4V88_407 IL_83039.11 | |
| IL_5MEI_174 | 1/6/443:447, 1/6/460:461 | C-loop Not in a motif group | geometric IL_5J7L_018 IL_08376.2 | |