Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
HL_4WQU_0011/AA/58:67No text annotation
Not in a motif group
homologous
HL_7RQB_001
HL_99167.1
HL_4WQU_0021/AA/86:94No text annotation
Not in a motif group
homologous
HL_7RQB_002
HL_96598.1
HL_4WQU_0031/AA/121:126No text annotation
Not in a motif group
homologous
HL_7RQB_003
HL_75407.1
HL_4WQU_0041/AA/136:141No text annotation
Not in a motif group
homologous
HL_7RQB_004
HL_79921.3
HL_4WQU_0051/AA/183:190No text annotation
Not in a motif group
geometric
HL_7RQB_006
HL_06192.2
HL_4WQU_0061/AA/214:219No text annotation
Not in a motif group
homologous
HL_7RQB_007
HL_02862.2
HL_4WQU_0071/AA/235:241No text annotation
Not in a motif group
homologous
HL_7RQB_008
HL_67216.7
HL_4WQU_0081/AA/269:275No text annotation
Not in a motif group
geometric
HL_5J7L_018
HL_34168.2
HL_4WQU_0091/AA/329:336No text annotation
Not in a motif group
homologous
HL_7RQB_010
HL_89380.2
HL_4WQU_0101/AA/343:347No text annotation
Not in a motif group
homologous
HL_7RQB_011
HL_75407.1
HL_4WQU_0111/AA/351:359No text annotation
Not in a motif group
homologous
HL_7RQB_012
HL_08002.9
HL_4WQU_0121/AA/409:419No text annotation
Not in a motif group
homologous
HL_7RQB_013
HL_91503.4
HL_4WQU_0131/AA/437:444No text annotation
Not in a motif group
homologous
HL_7RQB_014
HL_96598.1
HL_4WQU_0141/AA/488:493No text annotation
Not in a motif group
homologous
HL_7RQB_015
HL_42097.2
HL_4WQU_0151/AA/513:518No text annotation
Not in a motif group
homologous
HL_7RQB_016
HL_42097.2
HL_4WQU_0171/AA/589:598No text annotation
Not in a motif group
homologous
HL_7RQB_018
HL_89380.2
HL_4WQU_0181/AA/635:641No text annotation
Not in a motif group
homologous
HL_7RQB_019
HL_32369.1
HL_4WQU_0191/AA/654:659No text annotation
Not in a motif group
homologous
HL_7RQB_020
HL_42097.2
HL_4WQU_0201/AA/666:672GNRA with one bulged base
Not in a motif group
homologous
HL_4WF9_021
HL_42097.2
HL_4WQU_0211/AA/759:766No text annotation
Not in a motif group
homologous
HL_7RQB_022
HL_84085.2
HL_4WQU_0221/AA/791:800No text annotation
Not in a motif group
homologous
HL_7RQB_023
HL_39334.6
HL_4WQU_0231/AA/826:832No text annotation
Not in a motif group
homologous
HL_7RQB_024
HL_74322.1
HL_4WQU_0241/AA/873:878No text annotation
Not in a motif group
homologous
HL_7RQB_025
HL_64365.1
HL_4WQU_0251/AA/931:938No text annotation
Not in a motif group
geometric
HL_7RQB_026
HL_27930.1
HL_4WQU_0261/AA/1000:1007No text annotation
Not in a motif group
homologous
HL_7RQB_027
HL_42097.2
HL_4WQU_0271/AA/1024:1031No text annotation
Not in a motif group
homologous
HL_7RQB_028
HL_64430.2
HL_4WQU_0281/AA/1110:1120No text annotation
Not in a motif group
homologous
HL_6PRV_001
HL_07145.1
HL_4WQU_0291/AA/1138:1145No text annotation
Not in a motif group
homologous
HL_6PRV_002
HL_84085.2
HL_4WQU_0301/AA/1217:1223No text annotation
Not in a motif group
homologous
HL_7RQB_031
HL_94651.3
HL_4WQU_0311/AA/1268:1273No text annotation
Not in a motif group
homologous
HL_7RQB_032
HL_42097.2
HL_4WQU_0321/AA/1327:1335No text annotation
Not in a motif group
homologous
HL_7RQB_033
HL_89380.2
HL_4WQU_0331/AA/1370:1376No text annotation
Not in a motif group
homologous
HL_7RQB_034
HL_46680.1
HL_4WQU_0341/AA/1409:1414No text annotation
Not in a motif group
homologous
HL_7RQB_035
HL_87030.2
HL_4WQU_0351/AA/1435:1444No text annotation
Not in a motif group
homologous
HL_7RQB_036
HL_69023.2
HL_4WQU_0361/AA/1499:1506No text annotation
Not in a motif group
homologous
HL_7RQB_037
HL_32426.1
HL_4WQU_0371/AA/1538:1544No text annotation
Not in a motif group
homologous
HL_7RQB_038
HL_46680.1
HL_4WQU_0381/AA/1612:1615No text annotation
Not in a motif group
homologous
HL_7RQB_039
HL_38927.2
HL_4WQU_0391/AA/1658:1665No text annotation
Not in a motif group
homologous
HL_7RQB_040
HL_64430.2
HL_4WQU_0401/AA/1677:1682No text annotation
Not in a motif group
homologous
HL_7RQB_041
HL_01057.1
HL_4WQU_0411/AA/1738:1743UNCG
Not in a motif group
homologous
HL_5J7L_175
HL_03562.2
HL_4WQU_0421/AA/1765:1771No text annotation
Not in a motif group
homologous
HL_7RQB_043
HL_43656.2
HL_4WQU_0431/AA/1783:1787No text annotation
Not in a motif group
homologous
HL_7RQB_044
HL_76539.2
HL_4WQU_0441/AA/1808:1818No text annotation
Not in a motif group
homologous
HL_5J7L_178
HL_43613.5
HL_4WQU_0451/AA/1837:1842No text annotation
Not in a motif group
homologous
HL_7RQB_046
HL_42097.2
HL_4WQU_0461/AA/1895:1900No text annotation
Not in a motif group
homologous
HL_7RQB_047
HL_42097.2
HL_4WQU_0471/AA/1932:1942No text annotation
Not in a motif group
geometric
HL_5TBW_049
HL_71924.2
HL_4WQU_0481/AA/1971:1979No text annotation
Not in a motif group
homologous
HL_7RQB_049
HL_51824.1
HL_4WQU_0491/AA/2049:2058No text annotation
Not in a motif group
homologous
HL_7RQB_050
HL_90642.6
HL_4WQU_0511/AA/2226:2231No text annotation
Not in a motif group
homologous
HL_7RQB_052
HL_98426.1
HL_4WQU_0521/AA/2260:2268No text annotation
Not in a motif group
homologous
HL_7RQB_053
NA
HL_4WQU_0531/AA/2276:2288No text annotation
Not in a motif group
homologous
HL_7RQB_054
HL_19870.6
HL_4WQU_0541/AA/2315:2325No text annotation
Not in a motif group
homologous
HL_7RQB_055
HL_11805.3
HL_4WQU_0551/AA/2336:2343No text annotation
Not in a motif group
homologous
HL_7RQB_056
HL_12078.2
HL_4WQU_0561/AA/2367:2374No text annotation
Not in a motif group
homologous
HL_7RQB_057
HL_09136.1
HL_4WQU_0571/AA/2386:2391No text annotation
Not in a motif group
homologous
HL_7RQB_058
HL_42097.2
HL_4WQU_0581/AA/2416:2425No text annotation
Not in a motif group
homologous
HL_7RQB_059
HL_30784.2
HL_4WQU_0591/AA/2483:2491No text annotation
Not in a motif group
homologous
HL_7RQB_060
HL_06192.2
HL_4WQU_0601/AA/2540:2547No text annotation
Not in a motif group
homologous
HL_7RQB_061
HL_91104.1
HL_4WQU_0611/AA/2563:2569No text annotation
Not in a motif group
homologous
HL_4WF9_058
HL_43656.2
HL_4WQU_0621/AA/2606:2611No text annotation
Not in a motif group
homologous
HL_7RQB_063
HL_42097.2
HL_4WQU_0631/AA/2670:2675No text annotation
Not in a motif group
homologous
HL_7RQB_064
HL_42097.2
HL_4WQU_0641/AA/2713:2718No text annotation
Not in a motif group
homologous
HL_7RQB_065
HL_53171.2
HL_4WQU_0651/AA/2758:2772No text annotation
Not in a motif group
homologous
HL_7RQB_066
HL_56677.7
HL_4WQU_0671/AA/2829:2837No text annotation
Not in a motif group
homologous
HL_7RQB_068
HL_27930.1
HL_4WQU_0681/AA/2866:2871No text annotation
Not in a motif group
homologous
HL_7RQB_069
HL_42097.2
HL_4WQU_0691/AB/38:44No text annotation
Not in a motif group
geometric
HL_7RQB_070
HL_87939.1
HL_4WQU_0701/AB/86:91No text annotation
Not in a motif group
homologous
HL_7RQB_071
HL_42097.2
HL_4WQU_0711/BA/11:23No text annotation
Not in a motif group
HL_4WQU_0731/BA/156:165No text annotation
Not in a motif group
HL_4WQU_0741/BA/189C:189HNo text annotation
Not in a motif group
homologous
HL_6CZR_075
HL_10278.1
HL_4WQU_0751/BA/200:217No text annotation
Not in a motif group
homologous
HL_6CZR_076
HL_34168.2
HL_4WQU_0761/BA/259:267No text annotation
Not in a motif group
homologous
HL_4LFB_006
HL_69023.2
HL_4WQU_0771/BA/296:301GNRA
Not in a motif group
homologous
HL_4LFB_007
HL_42097.2
HL_4WQU_0781/BA/320:333No text annotation
Not in a motif group
homologous
HL_4LFB_008
HL_81205.2
HL_4WQU_0801/BA/379:384GNRA
Not in a motif group
homologous
HL_4LFB_010
HL_42097.2
HL_4WQU_0811/BA/419:424UNCG
Not in a motif group
homologous
HL_4LFB_011
HL_03562.2
HL_4WQU_0821/BA/458:473No text annotation
Not in a motif group
homologous
HL_4LFB_012
HL_43656.2
HL_4WQU_0831/BA/522:527No text annotation
Not in a motif group
geometric
HL_4WF9_003
HL_75407.1
HL_4WQU_0841/BA/617:623No text annotation
Not in a motif group
homologous
HL_4LFB_014
HL_26881.1
HL_4WQU_0851/BA/689:698No text annotation
Not in a motif group
homologous
HL_4LFB_015
HL_12326.1
HL_4WQU_0861/BA/726:731Other HL
Not in a motif group
homologous
HL_4LFB_016
HL_87030.2
HL_4WQU_0871/BA/786:796No text annotation
Not in a motif group
homologous
HL_4LFB_017
HL_12326.1
HL_4WQU_0881/BA/838:848No text annotation
Not in a motif group
homologous
HL_6CZR_089
HL_53837.1
HL_4WQU_0891/BA/862:867GNRA
Not in a motif group
homologous
HL_4LFB_019
HL_42097.2
HL_4WQU_0901/BA/897:902GNRA
Not in a motif group
homologous
HL_5J7L_020
HL_42097.2
HL_4WQU_0911/BA/963:972No text annotation
Not in a motif group
homologous
HL_4LFB_021
NA
HL_4WQU_0921/BA/1012:1017GNRA
Not in a motif group
homologous
HL_4LFB_022
HL_42097.2
HL_4WQU_0941/BA/1076:1081GNRA
Not in a motif group
homologous
HL_5J7L_023
HL_42097.2
HL_4WQU_0951/BA/1089:1096No text annotation
Not in a motif group
homologous
HL_4LFB_025
HL_71554.2
HL_4WQU_0961/BA/1134:1140No text annotation
Not in a motif group
homologous
HL_6CZR_097
NA
HL_4WQU_0971/BA/1165:1171GNRA
Not in a motif group
homologous
HL_4LFB_027
HL_42097.2
HL_4WQU_0981/BA/1265:1270Other HL
Not in a motif group
homologous
HL_4LFB_028
HL_42097.2
HL_4WQU_0991/BA/1314:1323No text annotation
Not in a motif group
homologous
HL_4LFB_029
HL_89380.2
HL_4WQU_1001/BA/1356:1366No text annotation
Not in a motif group
homologous
HL_4LFB_030
HL_96366.1
HL_4WQU_1011/BA/1445:1457No text annotation
Not in a motif group
homologous
HL_6CZR_102
HL_49722.1
HL_4WQU_1021/BA/1515:1520No text annotation
Not in a motif group
homologous
HL_6CZR_103
NA
HL_4WQU_1031/BW/13:22No text annotation
Not in a motif group
homologous
HL_6PMO_003
NA
HL_4WQU_1041/BW/30:40No text annotation
Not in a motif group
homologous
HL_5IB8_208
NA
HL_4WQU_1051/BW/53:61No text annotation
Not in a motif group
homologous
HL_1IL2_003
NA
HL_4WQU_1071/BY/30:40No text annotation
Not in a motif group
homologous
HL_5EL4_222
NA
HL_4WQU_1081/BY/53:61No text annotation
Not in a motif group
homologous
HL_1FIR_003
NA
HL_4WQU_1091/CA/59:68No text annotation
Not in a motif group
homologous
HL_7RQB_001
HL_99167.1
HL_4WQU_1101/CA/87:95No text annotation
Not in a motif group
homologous
HL_7RQB_002
HL_96598.1
HL_4WQU_1111/CA/123:128No text annotation
Not in a motif group
homologous
HL_7RQB_003
HL_75407.1
HL_4WQU_1121/CA/139:142ANo text annotation
Not in a motif group
homologous
HL_7RQB_004
HL_79921.3
HL_4WQU_1141/CA/194:201No text annotation
Not in a motif group
geometric
HL_7RQB_006
HL_06192.2
HL_4WQU_1151/CA/225:230No text annotation
Not in a motif group
homologous
HL_7RQB_007
HL_02862.2
HL_4WQU_1161/CA/246:252No text annotation
Not in a motif group
homologous
HL_7RQB_008
HL_67216.7
HL_4WQU_1171/CA/271I:271ONo text annotation
Not in a motif group
geometric
HL_5J7L_018
HL_34168.2
HL_4WQU_1181/CA/305:312No text annotation
Not in a motif group
homologous
HL_7RQB_010
HL_89380.2
HL_4WQU_1191/CA/319:323No text annotation
Not in a motif group
homologous
HL_5J7L_143
HL_75407.1
HL_4WQU_1201/CA/327:335No text annotation
Not in a motif group
homologous
HL_7RQB_012
HL_08002.9
HL_4WQU_1211/CA/382:392No text annotation
Not in a motif group
homologous
HL_7RQB_013
HL_91503.4
HL_4WQU_1221/CA/410:417No text annotation
Not in a motif group
homologous
HL_7RQB_014
HL_96598.1
HL_4WQU_1231/CA/462:467No text annotation
Not in a motif group
homologous
HL_7RQB_015
HL_42097.2
HL_4WQU_1241/CA/487:493GNRA
Not in a motif group
homologous
HL_4WF9_016
HL_42097.2
HL_4WQU_1261/CA/566:575No text annotation
Not in a motif group
geometric
HL_7RQB_018
HL_89380.2
HL_4WQU_1271/CA/612:615No text annotation
Not in a motif group
homologous
HL_7RQB_019
HL_32369.1
HL_4WQU_1281/CA/629:634No text annotation
Not in a motif group
homologous
HL_7RQB_020
HL_42097.2
HL_4WQU_1291/CA/641:647No text annotation
Not in a motif group
homologous
HL_7RQB_021
HL_42097.2
HL_4WQU_1301/CA/712:719No text annotation
Not in a motif group
homologous
HL_7RQB_022
HL_84085.2
HL_4WQU_1311/CA/744:753No text annotation
Not in a motif group
homologous
HL_7RQB_023
HL_39334.6
HL_4WQU_1321/CA/779:785No text annotation
Not in a motif group
homologous
HL_7RQB_024
HL_74322.1
HL_4WQU_1331/CA/826:831No text annotation
Not in a motif group
homologous
HL_7RQB_025
HL_64365.1
HL_4WQU_1341/CA/884:892No text annotation
Not in a motif group
HL_4WQU_1351/CA/955:962No text annotation
Not in a motif group
homologous
HL_7RQB_027
HL_42097.2
HL_4WQU_1361/CA/978:985No text annotation
Not in a motif group
homologous
HL_7RQB_028
HL_64430.2
HL_4WQU_1371/CA/1064:1074No text annotation
Not in a motif group
geometric
HL_5J7L_161
HL_07145.1
HL_4WQU_1381/CA/1092:1099No text annotation
Not in a motif group
homologous
HL_6PRV_002
HL_84085.2
HL_4WQU_1401/CA/1222:1227No text annotation
Not in a motif group
homologous
HL_7RQB_032
HL_42097.2
HL_4WQU_1411/CA/1281:1289No text annotation
Not in a motif group
homologous
HL_7RQB_033
HL_89380.2
HL_4WQU_1421/CA/1324:1330No text annotation
Not in a motif group
homologous
HL_7A0S_033
HL_46680.1
HL_4WQU_1431/CA/1363:1368No text annotation
Not in a motif group
homologous
HL_7RQB_035
HL_87030.2
HL_4WQU_1441/CA/1389:1398No text annotation
Not in a motif group
homologous
HL_7RQB_036
HL_69023.2
HL_4WQU_1451/CA/1451:1459No text annotation
Not in a motif group
homologous
HL_7RQB_037
HL_32426.1
HL_4WQU_1461/CA/1492:1498No text annotation
Not in a motif group
homologous
HL_7RQB_038
HL_46680.1
HL_4WQU_1481/CA/1565:1568No text annotation
Not in a motif group
homologous
HL_7RQB_039
HL_38927.2
HL_4WQU_1491/CA/1612:1619No text annotation
Not in a motif group
homologous
HL_7RQB_040
HL_64430.2
HL_4WQU_1501/CA/1631:1635No text annotation
Not in a motif group
homologous
HL_7RQB_041
HL_01057.1
HL_4WQU_1511/CA/1691:1696UNCG
Not in a motif group
geometric
HL_5J7L_175
HL_03562.2
HL_4WQU_1521/CA/1720:1742No text annotation
Not in a motif group
homologous
HL_7RQB_043
HL_43656.2
HL_4WQU_1531/CA/1752:1756No text annotation
Not in a motif group
homologous
HL_7RQB_044
HL_76539.2
HL_4WQU_1541/CA/1777:1787No text annotation
Not in a motif group
homologous
HL_5J7L_178
HL_43613.5
HL_4WQU_1551/CA/1806:1811No text annotation
Not in a motif group
homologous
HL_7RQB_046
HL_42097.2
HL_4WQU_1561/CA/1864:1878No text annotation
Not in a motif group
homologous
HL_7RQB_047
HL_42097.2
HL_4WQU_1571/CA/1910:1920No text annotation
Not in a motif group
geometric
HL_5TBW_049
HL_71924.2
HL_4WQU_1581/CA/1949:1957No text annotation
Not in a motif group
homologous
HL_7RQB_049
HL_51824.1
HL_4WQU_1591/CA/2027:2036No text annotation
Not in a motif group
homologous
HL_7RQB_050
HL_90642.6
HL_4WQU_1611/CA/2205:2219No text annotation
Not in a motif group
homologous
HL_7RQB_052
HL_98426.1
HL_4WQU_1621/CA/2248:2256No text annotation
Not in a motif group
homologous
HL_7RQB_053
NA
HL_4WQU_1631/CA/2264:2276No text annotation
Not in a motif group
homologous
HL_7RQB_054
HL_19870.6
HL_4WQU_1641/CA/2303:2313No text annotation
Not in a motif group
homologous
HL_7RQB_055
HL_11805.3
HL_4WQU_1651/CA/2324:2331No text annotation
Not in a motif group
homologous
HL_7RQB_056
HL_12078.2
HL_4WQU_1661/CA/2355:2362No text annotation
Not in a motif group
homologous
HL_7RQB_057
HL_09136.1
HL_4WQU_1671/CA/2374:2379No text annotation
Not in a motif group
homologous
HL_7RQB_058
HL_42097.2
HL_4WQU_1681/CA/2404:2413No text annotation
Not in a motif group
homologous
HL_7RQB_059
HL_30784.2
HL_4WQU_1691/CA/2471:2479No text annotation
Not in a motif group
homologous
HL_7RQB_060
HL_06192.2
HL_4WQU_1701/CA/2528:2535No text annotation
Not in a motif group
homologous
HL_7RQB_061
HL_91104.1
HL_4WQU_1711/CA/2551:2557No text annotation
Not in a motif group
homologous
HL_4WF9_058
HL_43656.2
HL_4WQU_1721/CA/2594:2599No text annotation
Not in a motif group
homologous
HL_7RQB_063
HL_42097.2
HL_4WQU_1731/CA/2658:2663No text annotation
Not in a motif group
homologous
HL_7RQB_064
HL_42097.2
HL_4WQU_1741/CA/2701:2706No text annotation
Not in a motif group
homologous
HL_7RQB_065
HL_53171.2
HL_4WQU_1751/CA/2745:2759No text annotation
Not in a motif group
homologous
HL_7RQB_066
HL_56677.7
HL_4WQU_1771/CA/2819:2827No text annotation
Not in a motif group
homologous
HL_7RQB_068
HL_27930.1
HL_4WQU_1781/CA/2856:2861No text annotation
Not in a motif group
homologous
HL_7RQB_069
HL_42097.2
HL_4WQU_1791/CB/38:44No text annotation
Not in a motif group
homologous
HL_7RQB_070
HL_87939.1
HL_4WQU_1801/CB/86:91No text annotation
Not in a motif group
homologous
HL_7RQB_071
HL_42097.2
HL_4WQU_1811/DA/12:22No text annotation
Not in a motif group
homologous
HL_4LFB_001
HL_89881.2
HL_4WQU_1831/DA/158:163GNRA
Not in a motif group
homologous
HL_4LFB_003
HL_42097.2
HL_4WQU_1841/DA/189C:189HNo text annotation
Not in a motif group
homologous
HL_4LFB_004
HL_10278.1
HL_4WQU_1851/DA/201:216No text annotation
Not in a motif group
homologous
HL_4LFB_005
HL_91104.1
HL_4WQU_1861/DA/259:267No text annotation
Not in a motif group
homologous
HL_4LFB_006
HL_69023.2
HL_4WQU_1871/DA/296:301GNRA
Not in a motif group
homologous
HL_4LFB_007
HL_42097.2
HL_4WQU_1881/DA/320:333No text annotation
Not in a motif group
homologous
HL_4LFB_008
HL_81205.2
HL_4WQU_1891/DA/342:347UNCG
Not in a motif group
homologous
HL_4LFB_009
HL_03562.2
HL_4WQU_1901/DA/379:384GNRA
Not in a motif group
homologous
HL_4LFB_010
HL_42097.2
HL_4WQU_1911/DA/419:424UNCG
Not in a motif group
homologous
HL_4LFB_011
HL_03562.2
HL_4WQU_1921/DA/458:473No text annotation
Not in a motif group
homologous
HL_4LFB_012
HL_43656.2
HL_4WQU_1931/DA/522:527No text annotation
Not in a motif group
geometric
HL_4WF9_003
HL_75407.1
HL_4WQU_1941/DA/617:623No text annotation
Not in a motif group
homologous
HL_4LFB_014
HL_26881.1
HL_4WQU_1951/DA/689:698No text annotation
Not in a motif group
homologous
HL_4LFB_015
HL_12326.1
HL_4WQU_1961/DA/726:731Other HL
Not in a motif group
homologous
HL_4LFB_016
HL_87030.2
HL_4WQU_1971/DA/786:796No text annotation
Not in a motif group
homologous
HL_4LFB_017
HL_12326.1
HL_4WQU_1981/DA/838:848No text annotation
Not in a motif group
homologous
HL_6CZR_089
HL_53837.1
HL_4WQU_1991/DA/862:867GNRA
Not in a motif group
homologous
HL_4LFB_019
HL_42097.2
HL_4WQU_2001/DA/897:902GNRA
Not in a motif group
homologous
HL_5J7L_020
HL_42097.2
HL_4WQU_2011/DA/963:972No text annotation
Not in a motif group
homologous
HL_4LFB_021
NA
HL_4WQU_2021/DA/1012:1017GNRA
Not in a motif group
homologous
HL_4LFB_022
HL_42097.2
HL_4WQU_2041/DA/1076:1081GNRA
Not in a motif group
homologous
HL_4LFB_024
HL_42097.2
HL_4WQU_2051/DA/1089:1096No text annotation
Not in a motif group
homologous
HL_4LFB_025
HL_71554.2
HL_4WQU_2061/DA/1134:1140No text annotation
Not in a motif group
homologous
HL_6CZR_097
NA
HL_4WQU_2071/DA/1165:1171GNRA
Not in a motif group
homologous
HL_4LFB_027
HL_42097.2
HL_4WQU_2081/DA/1265:1270No text annotation
Not in a motif group
homologous
HL_6CZR_099
NA
HL_4WQU_2091/DA/1314:1323No text annotation
Not in a motif group
homologous
HL_4LFB_029
HL_89380.2
HL_4WQU_2101/DA/1355:1367No text annotation
Not in a motif group
HL_4WQU_2111/DA/1445:1457No text annotation
Not in a motif group
homologous
HL_6CZR_102
HL_49722.1
HL_4WQU_2121/DA/1515:1520No text annotation
Not in a motif group
homologous
HL_4LFB_032
NA
HL_4WQU_2131/DW/13:22No text annotation
Not in a motif group
homologous
HL_6PMO_003
NA
HL_4WQU_2141/DW/30:40No text annotation
Not in a motif group
homologous
HL_1B23_002
NA
HL_4WQU_2151/DW/53:61No text annotation
Not in a motif group
homologous
HL_6CFJ_108
NA
HL_4WQU_2171/DY/30:40No text annotation
Not in a motif group
homologous
HL_4WQ1_224
NA
HL_4WQU_2181/DY/53:61No text annotation
Not in a motif group
homologous
HL_1QF6_003
NA

Problematic loops

#loop idProblemSequence
HL_4WQU_016No text annotation
HL_4WQU_050UNCG
HL_4WQU_066No text annotation
HL_4WQU_072No text annotation
HL_4WQU_079No text annotation
HL_4WQU_093No text annotation
HL_4WQU_106No text annotation
HL_4WQU_113No text annotation
HL_4WQU_125No text annotation
HL_4WQU_139No text annotation
HL_4WQU_147No text annotation
HL_4WQU_160UNCG
HL_4WQU_176No text annotation
HL_4WQU_182No text annotation
HL_4WQU_203No text annotation
HL_4WQU_216No text annotation

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
IL_4WQU_0011/AA/24:30,
1/AA/535:541
Triple sheared with non-canonical cWW
Not in a motif group
homologous
IL_7RQB_001
IL_66414.6
IL_4WQU_0021/AA/36:37,
1/AA/468:470
Single bulged A
Not in a motif group
homologous
IL_7RQB_002
IL_37497.3
IL_4WQU_0031/AA/42:43,
1/AA/461:463
Minor groove platform
Not in a motif group
homologous
IL_7RQB_003
IL_42622.2
IL_4WQU_0041/AA/80:84,
1/AA/96:103
Kink-turn
Not in a motif group
homologous
IL_7RQB_004
IL_45067.2
IL_4WQU_0051/AA/172:173,
1/AA/201:203
Single stack bend
Not in a motif group
homologous
IL_7RQB_005
IL_76488.2
IL_4WQU_0061/AA/177:183,
1/AA/190:197
8x7 Sarcin-Ricin; G-bulge
Not in a motif group
homologous
IL_7RQB_006
IL_04346.7
IL_4WQU_0071/AA/228:234,
1/AA/242:247
7x6 Sarcin-Ricin; G-bulge
Not in a motif group
homologous
IL_7RQB_007
IL_76042.2
IL_4WQU_0081/AA/291:292,
1/AA/392:394
Major groove platform
Not in a motif group
homologous
IL_7RQB_009
IL_27635.2
IL_4WQU_0101/AA/304:308,
1/AA/381:384
tSH-tHW
Not in a motif group
homologous
IL_7RQB_011
IL_04059.1
IL_4WQU_0111/AA/312:314,
1/AA/374:377
Isolated tHS basepair with bulges
Not in a motif group
homologous
IL_7RQB_012
IL_38958.7
IL_4WQU_0121/AA/317:319,
1/AA/367:371
No text annotation
Not in a motif group
homologous
IL_7RQB_013
IL_69440.1
IL_4WQU_0131/AA/507:510,
1/AA/521:534
No text annotation
Not in a motif group
homologous
IL_7RQB_014
IL_60992.6
IL_4WQU_0141/AA/587:589,
1/AA/598:600
No text annotation
Not in a motif group
geometric
IL_5J7L_257
IL_95997.1
IL_4WQU_0151/AA/629:633,
1/AA/643:647
AAA cross-strand stack
Not in a motif group
homologous
IL_7RQB_016
IL_17136.1
IL_4WQU_0171/AA/719:721,
1/AA/853:855
No text annotation
Not in a motif group
geometric
IL_7RQB_017
IL_95997.1
IL_4WQU_0181/AA/721:725,
1/AA/846:853
No text annotation
Not in a motif group
homologous
IL_7RQB_018
IL_17470.6
IL_4WQU_0191/AA/744:745,
1/AA/810:812
Single bulged A
Not in a motif group
geometric
IL_7RQB_019
IL_37497.3
IL_4WQU_0201/AA/749:750,
1/AA/775:777
Single bulged G
Not in a motif group
homologous
IL_7RQB_020
IL_00225.3
IL_4WQU_0211/AA/750:754,
1/AA/771:775
Triple sheared
Not in a motif group
geometric
IL_7RQB_021
IL_56467.8
IL_4WQU_0221/AA/785:788,
1/AA/803:805
Major groove platform with extra cWW
Not in a motif group
homologous
IL_7RQB_022
IL_05564.2
IL_4WQU_0231/AA/822:824,
1/AA/834:838
Multiple bulged bases
Not in a motif group
homologous
IL_7RQB_023
IL_90991.6
IL_4WQU_0241/AA/884:885,
1/AA/985:987
Single stack bend
Not in a motif group
homologous
IL_7RQB_024
IL_92001.1
IL_4WQU_0251/AA/891:893,
1/AA/976:979
Intercalated cWW
Not in a motif group
homologous
IL_7RQB_025
IL_52767.2
IL_4WQU_0261/AA/893:897,
1/AA/973:976
No text annotation
Not in a motif group
geometric
IL_7RQB_026
IL_94165.1
IL_4WQU_0271/AA/904:909,
1/AA/961:966
5x5 Sarcin-Ricin with intercalated A; G-bulge
Not in a motif group
homologous
IL_7A0S_027
IL_81631.1
IL_4WQU_0281/AA/909:910,
1/AA/959:961
Minor groove platform
Not in a motif group
geometric
IL_7RQB_028
IL_42622.2
IL_4WQU_0291/AA/911:915,
1/AA/955:958
C-loop
Not in a motif group
homologous
IL_7RQB_029
IL_02509.1
IL_4WQU_0301/AA/917:919,
1/AA/951:953
Isolated cWS basepair
Not in a motif group
homologous
IL_7RQB_030
IL_52767.2
IL_4WQU_0311/AA/922:924,
1/AA/945:948
Minor groove platform with extra cWW
Not in a motif group
geometric
IL_7RQB_031
IL_46796.1
IL_4WQU_0321/AA/924:926,
1/AA/944:945
Minor groove platform
Not in a motif group
homologous
IL_7RQB_032
IL_93353.1
IL_4WQU_0331/AA/927:929,
1/AA/940:943
Isolated non-canonical cWW with bulges
Not in a motif group
geometric
IL_4V9F_097
IL_82068.2
IL_4WQU_0351/AA/997:999,
1/AA/1008:1010
No text annotation
Not in a motif group
homologous
IL_7RQB_034
IL_95997.1
IL_4WQU_0361/AA/1040:1042,
1/AA/1205:1206
Single bulged C
Not in a motif group
homologous
IL_7RQB_035
IL_61258.12
IL_4WQU_0371/AA/1044:1048,
1/AA/1199:1203
UAA/GAN
Not in a motif group
homologous
IL_7RQB_036
IL_89002.2
IL_4WQU_0381/AA/1050:1057,
1/AA/1196:1197
SSU/LSU pseudoknot
Not in a motif group
geometric
IL_7RQB_037
IL_15861.7
IL_4WQU_0391/AA/1057:1059,
1/AA/1195:1196
Single bulged U
Not in a motif group
homologous
IL_7RQB_038
IL_83039.14
IL_4WQU_0401/AA/1064:1070,
1/AA/1185:1190
No text annotation
Not in a motif group
homologous
IL_4WF9_039
IL_57188.3
IL_4WQU_0411/AA/1070:1076,
1/AA/1170:1185
No text annotation
Not in a motif group
geometric
IL_7RQB_040
IL_50715.1
IL_4WQU_0421/AA/1077:1080,
1/AA/1167:1169
Isolated non-canonical cWW with bulges
Not in a motif group
homologous
IL_7RQB_041
IL_82068.2
IL_4WQU_0431/AA/1089:1098,
1/AA/1153:1158
No text annotation
Not in a motif group
IL_4WQU_0451/AA/1105:1110,
1/AA/1120:1125
No text annotation
Not in a motif group
IL_4WQU_0461/AA/1133:1137,
1/AA/1146:1148
No text annotation
Not in a motif group
homologous
IL_7RQB_044
NA
IL_4WQU_0471/AA/1241:1243,
1/AA/1293:1296
Isolated cWS basepair
Not in a motif group
homologous
IL_7RQB_045
IL_52767.2
IL_4WQU_0481/AA/1247:1251,
1/AA/1286:1289
No text annotation
Not in a motif group
homologous
IL_7RQB_046
IL_68574.2
IL_4WQU_0491/AA/1253:1260,
1/AA/1280:1284
Kink-turn
Not in a motif group
homologous
IL_7RQB_047
IL_70923.2
IL_4WQU_0501/AA/1264:1266,
1/AA/1275:1276
Single bulged A
Not in a motif group
homologous
IL_7RQB_048
IL_37497.3
IL_4WQU_0511/AA/1308:1315,
1/AA/2033:2039
8x7 Sarcin-Ricin; G-bulge
Not in a motif group
homologous
IL_7RQB_049
IL_04346.7
IL_4WQU_0521/AA/1356:1359,
1/AA/1649:1650
Major groove platform; stack outside cWW
Not in a motif group
homologous
IL_7RQB_050
IL_50694.2
IL_4WQU_0531/AA/1365:1369,
1/AA/1377:1379
C-loop
Not in a motif group
homologous
IL_7RQB_051
IL_63596.6
IL_4WQU_0541/AA/1397:1401,
1/AA/1422:1426
UAA/GAN
Not in a motif group
homologous
IL_7RQB_052
IL_89002.2
IL_4WQU_0551/AA/1403:1407,
1/AA/1416:1420
tSH-tHW-tHS
Not in a motif group
homologous
IL_7RQB_053
IL_17136.1
IL_4WQU_0561/AA/1461:1462,
1/AA/1629:1633
No text annotation
Not in a motif group
homologous
IL_7RQB_054
IL_67474.4
IL_4WQU_0571/AA/1463:1467,
1/AA/1624:1628
UAA/GAN
Not in a motif group
homologous
IL_7RQB_055
IL_89002.2
IL_4WQU_0581/AA/1479:1481,
1/AA/1604:1607
Isolated tWW turn
Not in a motif group
homologous
IL_7RQB_056
IL_54997.7
IL_4WQU_0591/AA/1483:1486,
1/AA/1598:1602
tSH-tHW
Not in a motif group
homologous
IL_7RQB_057
IL_04059.1
IL_4WQU_0601/AA/1495:1497,
1/AA/1509:1510
Single stack bend
Not in a motif group
homologous
IL_7RQB_058
IL_76488.2
IL_4WQU_0611/AA/1498:1499,
1/AA/1506:1508
Single bulged A
Not in a motif group
geometric
IL_7RQB_059
IL_37497.3
IL_4WQU_0621/AA/1516:1520,
1/AA/1566:1569
UAA/GAN
Not in a motif group
homologous
IL_7RQB_060
IL_07235.1
IL_4WQU_0631/AA/1528:1529,
1/AA/1552:1558
No text annotation
Not in a motif group
homologous
IL_7RQB_0