6HHQ Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_6HHQ_001 | 1/1/38:45 | No text annotation | homologous HL_5TBW_001 NA | |
| HL_6HHQ_002 | 1/1/69:74 | No text annotation | homologous HL_5TBW_002 NA | |
| HL_6HHQ_003 | 1/1/90:96 | No text annotation | homologous HL_5TBW_003 NA | |
| HL_6HHQ_004 | 1/1/132:136 | No text annotation | homologous HL_5TBW_004 NA | |
| HL_6HHQ_005 | 1/1/194:201 | T-loop with 2 stacked bulged bases | homologous HL_5TBW_005 NA | |
| HL_6HHQ_006 | 1/1/208:212 | No text annotation | homologous HL_5TBW_006 NA | |
| HL_6HHQ_007 | 1/1/216:224 | T-loop with unstacked turn | homologous HL_5TBW_007 NA | |
| HL_6HHQ_008 | 1/1/278:287 | No text annotation | homologous HL_5TBW_008 NA | |
| HL_6HHQ_009 | 1/1/303:312 | Pseudoknot geometry | homologous HL_5TBW_009 NA | |
| HL_6HHQ_010 | 1/1/357:362 | GNRA | homologous HL_5TBW_010 NA | |
| HL_6HHQ_011 | 1/1/382:387 | GNRA | homologous HL_5TBW_011 NA | |
| HL_6HHQ_012 | 1/1/543:548 | No text annotation | homologous HL_5TBW_012 NA | |
| HL_6HHQ_013 | 1/1/599:604 | GNRA | homologous HL_5TBW_013 NA | |
| HL_6HHQ_014 | 1/1/640:649 | T-loop with 2 stacked bulged bases | homologous HL_5TBW_014 NA | |
| HL_6HHQ_015 | 1/1/686:694 | No text annotation | homologous HL_5TBW_015 NA | |
| HL_6HHQ_016 | 1/1/707:712 | GNRA | homologous HL_5TBW_016 NA | |
| HL_6HHQ_017 | 1/1/732:737 | GNRA | homologous HL_5TBW_017 NA | |
| HL_6HHQ_018 | 1/1/763:768 | No text annotation | homologous HL_5TBW_018 NA | |
| HL_6HHQ_019 | 1/1/844:849 | GNRA | homologous HL_5TBW_019 NA | |
| HL_6HHQ_020 | 1/1/876:885 | No text annotation | homologous HL_5TBW_020 NA | |
| HL_6HHQ_021 | 1/1/910:918 | No text annotation | homologous HL_5TBW_021 NA | |
| HL_6HHQ_022 | 1/1/958:963 | Externally structured | homologous HL_5TBW_022 NA | |
| HL_6HHQ_023 | 1/1/1023:1029 | GNRA | homologous HL_5TBW_023 NA | |
| HL_6HHQ_024 | 1/1/1076:1083 | No text annotation | homologous HL_5TBW_024 NA | |
| HL_6HHQ_025 | 1/1/1126:1132 | GNRA | homologous HL_5TBW_025 NA | |
| HL_6HHQ_026 | 1/1/1148:1155 | No text annotation | homologous HL_5TBW_026 NA | |
| HL_6HHQ_029 | 1/1/1347:1357 | No text annotation | homologous HL_5TBW_029 NA | |
| HL_6HHQ_030 | 1/1/1403:1408 | GNRA | homologous HL_5TBW_030 NA | |
| HL_6HHQ_031 | 1/1/1462:1470 | T-loop with 2 stacked bulged bases | homologous HL_5TBW_031 NA | |
| HL_6HHQ_032 | 1/1/1506:1512 | Pseudoknot geometry with 3' bulge | homologous HL_5TBW_032 NA | |
| HL_6HHQ_033 | 1/1/1544:1549 | GNRA variation | homologous HL_5TBW_033 NA | |
| HL_6HHQ_034 | 1/1/1599:1608 | No text annotation | homologous HL_5TBW_035 NA | |
| HL_6HHQ_035 | 1/1/1634:1639 | GNRA | homologous HL_5TBW_036 NA | |
| HL_6HHQ_036 | 1/1/1680:1688 | No text annotation | homologous HL_5TBW_037 NA | |
| HL_6HHQ_037 | 1/1/1719:1725 | No text annotation | homologous HL_5TBW_038 NA | |
| HL_6HHQ_038 | 1/1/1760:1765 | GNRA related | homologous HL_5TBW_039 NA | |
| HL_6HHQ_039 | 1/1/1792:1796 | Mini UNCG | homologous HL_5TBW_040 NA | |
| HL_6HHQ_040 | 1/1/1844:1851 | No text annotation | homologous HL_5TBW_041 NA | |
| HL_6HHQ_041 | 1/1/1862:1868 | GNRA | homologous HL_5TBW_042 NA | |
| HL_6HHQ_042 | 1/1/1923:1928 | UNCG | geometric HL_5TBW_043 NA | |
| HL_6HHQ_044 | 1/1/2110:2114 | No text annotation | homologous HL_5TBW_045 NA | |
| HL_6HHQ_045 | 1/1/2135:2145 | No text annotation | homologous HL_5TBW_046 NA | |
| HL_6HHQ_046 | 1/1/2164:2170 | GNRA | homologous HL_5TBW_047 NA | |
| HL_6HHQ_047 | 1/1/2220:2225 | GNRA | homologous HL_5TBW_048 NA | |
| HL_6HHQ_048 | 1/1/2253:2263 | No text annotation | homologous HL_5TBW_049 NA | |
| HL_6HHQ_049 | 1/1/2292:2300 | No text annotation | homologous HL_5TBW_050 NA | |
| HL_6HHQ_050 | 1/1/2369:2378 | No text annotation | homologous HL_5TBW_051 NA | |
| HL_6HHQ_053 | 1/1/2616:2624 | No text annotation | homologous HL_5TBW_054 NA | |
| HL_6HHQ_054 | 1/1/2633:2645 | No text annotation | homologous HL_5TBW_055 NA | |
| HL_6HHQ_055 | 1/1/2673:2681 | No text annotation | homologous HL_5TBW_056 NA | |
| HL_6HHQ_056 | 1/1/2693:2700 | Pseudoknot geometry | homologous HL_5TBW_057 NA | |
| HL_6HHQ_057 | 1/1/2724:2732 | No text annotation | homologous HL_5TBW_058 NA | |
| HL_6HHQ_058 | 1/1/2744:2749 | GNRA | homologous HL_5TBW_059 NA | |
| HL_6HHQ_059 | 1/1/2776:2784 | Pseudoknot geometry | homologous HL_5TBW_060 NA | |
| HL_6HHQ_060 | 1/1/2840:2848 | No text annotation | homologous HL_5TBW_061 NA | |
| HL_6HHQ_061 | 1/1/2897:2904 | No text annotation | homologous HL_5TBW_062 NA | |
| HL_6HHQ_062 | 1/1/2920:2926 | No text annotation | geometric HL_5TBW_063 NA | |
| HL_6HHQ_063 | 1/1/2963:2968 | GNRA | homologous HL_5TBW_064 NA | |
| HL_6HHQ_064 | 1/1/3025:3030 | GNRA | geometric HL_5TBW_065 NA | |
| HL_6HHQ_065 | 1/1/3068:3073 | Ribsomal LSU H95 | homologous HL_5TBW_066 NA | |
| HL_6HHQ_066 | 1/1/3110:3124 | No text annotation | homologous HL_5TBW_067 NA | |
| HL_6HHQ_067 | 1/1/3194:3197 | No text annotation | geometric HL_5TBW_068 NA | |
| HL_6HHQ_068 | 1/1/3240:3247 | No text annotation | homologous HL_5TBW_069 NA | |
| HL_6HHQ_069 | 1/1/3303:3311 | No text annotation | geometric HL_5TBW_070 NA | |
| HL_6HHQ_070 | 1/1/3350:3353 | Mini UNCG | geometric HL_5TBW_071 NA | |
| HL_6HHQ_227 | 1/3/32:45 | No text annotation | homologous HL_8P9A_183 HL_13971.1 | |
| HL_6HHQ_071 | 1/3/36:41 | No text annotation | geometric HL_5TBW_185 NA | |
| HL_6HHQ_072 | 1/3/88:93 | GNRA | homologous HL_5TBW_186 NA | |
| HL_6HHQ_073 | 1/4/47:56 | Pseudoknot with intercalation | geometric HL_7A0S_001 HL_93438.2 | |
| HL_6HHQ_074 | 1/4/69:89 | No text annotation | homologous HL_8P4V_073 NA | |
| HL_6HHQ_075 | 1/4/108:114 | No text annotation | homologous HL_5TBW_075 NA | |
| HL_6HHQ_076 | 1/4/124:129 | No text annotation | homologous HL_5TBW_076 NA | |
| HL_6HHQ_077 | 1/A/7:17 | No text annotation | geometric HL_4V88_186 NA | |
| HL_6HHQ_078 | 1/A/70:81 | No text annotation | geometric HL_5TBW_006 NA | |
| HL_6HHQ_079 | 1/A/154:160 | GNRA related | geometric HL_4V88_188 NA | |
| HL_6HHQ_080 | 1/A/190:195 | No text annotation | geometric HL_5TBW_006 NA | |
| HL_6HHQ_082 | 1/A/243:250 | T-loop with 1 bulged base | geometric HL_4V88_191 NA | |
| HL_6HHQ_084 | 1/A/330:338 | GNRA related | geometric HL_4V88_193 NA | |
| HL_6HHQ_085 | 1/A/368:373 | No text annotation | geometric HL_4V88_194 NA | |
| HL_6HHQ_086 | 1/A/393:404 | No text annotation | geometric HL_4V88_195 NA | |
| HL_6HHQ_087 | 1/A/414:419 | UNCG | geometric HL_4V88_196 NA | |
| HL_6HHQ_088 | 1/A/450:456 | No text annotation | geometric HL_5NFV_001 HL_69752.2 | |
| HL_6HHQ_090 | 1/A/520:532 | No text annotation | geometric HL_4V88_199 NA | |
| HL_6HHQ_091 | 1/A/569:574 | GNRA variation | geometric HL_4V88_200 NA | |
| HL_6HHQ_092 | 1/A/703:735 | No text annotation | ||
| HL_6HHQ_093 | 1/A/764:772 | No text annotation | geometric HL_4V88_203 NA | |
| HL_6HHQ_094 | 1/A/777:783 | No text annotation | geometric HL_1WZ2_007 HL_75660.5 | |
| HL_6HHQ_095 | 1/A/829:843 | Pseudoknot geometry | geometric HL_4V88_205 NA | |
| HL_6HHQ_096 | 1/A/900:909 | No text annotation | geometric HL_4V88_206 NA | |
| HL_6HHQ_097 | 1/A/937:942 | GNRA | geometric HL_4V88_207 NA | |
| HL_6HHQ_098 | 1/A/997:1007 | No text annotation | geometric HL_4V88_208 NA | |
| HL_6HHQ_099 | 1/A/1055:1064 | No text annotation | homologous HL_8P9A_212 HL_97917.2 | |
| HL_6HHQ_100 | 1/A/1084:1089 | GNRA | geometric HL_4V88_210 NA | |
| HL_6HHQ_101 | 1/A/1121:1126 | GNRA | geometric HL_4LFB_020 HL_37824.7 | |
| HL_6HHQ_102 | 1/A/1188:1197 | No text annotation | geometric HL_4V88_212 NA | |
| HL_6HHQ_103 | 1/A/1238:1247 | Anticodon loop related | geometric HL_4V88_213 NA | |
| HL_6HHQ_104 | 1/A/1296:1301 | GNRA | geometric HL_4V88_214 NA | |
| HL_6HHQ_105 | 1/A/1309:1316 | No text annotation | geometric HL_4V88_215 NA | |
| HL_6HHQ_106 | 1/A/1359:1364 | No text annotation | geometric HL_4V88_216 NA | |
| HL_6HHQ_107 | 1/A/1396:1402 | GNRA | geometric HL_5J7L_026 HL_93535.1 | |
| HL_6HHQ_108 | 1/A/1501:1506 | GNRA | geometric HL_4V88_218 NA | |
| HL_6HHQ_109 | 1/A/1550:1561 | No text annotation | geometric HL_4V88_219 NA | |
| HL_6HHQ_110 | 1/A/1594:1602 | No text annotation | geometric HL_4V88_220 NA | |
| HL_6HHQ_112 | 1/A/1778:1783 | GNRA variation | geometric HL_4V88_222 NA | |
| HL_6HHQ_113 | 1/AR/38:45 | No text annotation | geometric HL_5TBW_001 NA | |
| HL_6HHQ_114 | 1/AR/69:74 | No text annotation | homologous HL_5TBW_002 NA | |
| HL_6HHQ_115 | 1/AR/90:96 | No text annotation | homologous HL_5TBW_003 NA | |
| HL_6HHQ_116 | 1/AR/132:136 | No text annotation | homologous HL_5TBW_004 NA | |
| HL_6HHQ_117 | 1/AR/194:201 | T-loop with 2 stacked bulged bases | homologous HL_5TBW_005 NA | |
| HL_6HHQ_118 | 1/AR/208:212 | No text annotation | homologous HL_5TBW_006 NA | |
| HL_6HHQ_119 | 1/AR/216:224 | T-loop with unstacked turn | homologous HL_5TBW_007 NA | |
| HL_6HHQ_120 | 1/AR/278:287 | No text annotation | homologous HL_5TBW_008 NA | |
| HL_6HHQ_121 | 1/AR/303:312 | Pseudoknot geometry | homologous HL_5TBW_009 NA | |
| HL_6HHQ_122 | 1/AR/357:362 | GNRA | homologous HL_5TBW_010 NA | |
| HL_6HHQ_123 | 1/AR/382:387 | GNRA | homologous HL_5TBW_011 NA | |
| HL_6HHQ_240 | 1/AR/543:548 | No text annotation | homologous HL_8P9A_231 HL_13189.1 | |
| HL_6HHQ_125 | 1/AR/599:604 | GNRA | homologous HL_5TBW_013 NA | |
| HL_6HHQ_126 | 1/AR/640:649 | T-loop with 2 stacked bulged bases | homologous HL_5TBW_014 NA | |
| HL_6HHQ_127 | 1/AR/686:694 | No text annotation | homologous HL_8C3A_015 NA | |
| HL_6HHQ_128 | 1/AR/707:712 | GNRA | homologous HL_5TBW_016 NA | |
| HL_6HHQ_129 | 1/AR/732:737 | GNRA | homologous HL_5TBW_017 NA | |
| HL_6HHQ_130 | 1/AR/763:768 | No text annotation | homologous HL_5TBW_018 NA | |
| HL_6HHQ_131 | 1/AR/844:849 | GNRA | homologous HL_5TBW_019 NA | |
| HL_6HHQ_132 | 1/AR/876:885 | No text annotation | homologous HL_5TBW_020 NA | |
| HL_6HHQ_133 | 1/AR/910:918 | No text annotation | homologous HL_8C3A_021 NA | |
| HL_6HHQ_134 | 1/AR/958:963 | Externally structured | homologous HL_5TBW_022 NA | |
| HL_6HHQ_136 | 1/AR/1076:1083 | No text annotation | geometric HL_5TBW_024 NA | |
| HL_6HHQ_137 | 1/AR/1126:1132 | GNRA | homologous HL_5TBW_025 NA | |
| HL_6HHQ_138 | 1/AR/1148:1155 | No text annotation | homologous HL_5TBW_026 NA | |
| HL_6HHQ_139 | 1/AR/1239:1249 | No text annotation | homologous HL_8C3A_027 NA | |
| HL_6HHQ_140 | 1/AR/1267:1274 | GNRA wlth tandem sheared | homologous HL_8C3A_028 NA | |
| HL_6HHQ_141 | 1/AR/1347:1357 | No text annotation | homologous HL_5TBW_029 NA | |
| HL_6HHQ_142 | 1/AR/1403:1408 | GNRA | homologous HL_5TBW_030 NA | |
| HL_6HHQ_143 | 1/AR/1462:1470 | T-loop with 2 stacked bulged bases | homologous HL_5TBW_031 NA | |
| HL_6HHQ_144 | 1/AR/1506:1512 | Pseudoknot geometry with 3' bulge | homologous HL_5TBW_032 NA | |
| HL_6HHQ_145 | 1/AR/1544:1549 | GNRA variation | homologous HL_5TBW_033 NA | |
| HL_6HHQ_147 | 1/AR/1599:1608 | No text annotation | homologous HL_5TBW_035 NA | |
| HL_6HHQ_148 | 1/AR/1634:1639 | GNRA | homologous HL_5TBW_036 NA | |
| HL_6HHQ_149 | 1/AR/1680:1688 | No text annotation | homologous HL_5TBW_037 NA | |
| HL_6HHQ_150 | 1/AR/1719:1725 | No text annotation | homologous HL_5TBW_038 NA | |
| HL_6HHQ_152 | 1/AR/1792:1796 | Mini UNCG | homologous HL_5TBW_040 NA | |
| HL_6HHQ_153 | 1/AR/1844:1851 | No text annotation | homologous HL_5TBW_041 NA | |
| HL_6HHQ_154 | 1/AR/1862:1868 | GNRA | homologous HL_5TBW_042 NA | |
| HL_6HHQ_155 | 1/AR/1923:1928 | UNCG | geometric HL_5TBW_043 NA | |
| HL_6HHQ_157 | 1/AR/2110:2114 | No text annotation | homologous HL_5TBW_045 NA | |
| HL_6HHQ_158 | 1/AR/2135:2145 | No text annotation | homologous HL_5TBW_046 NA | |
| HL_6HHQ_159 | 1/AR/2164:2170 | GNRA | homologous HL_5TBW_047 NA | |
| HL_6HHQ_160 | 1/AR/2220:2225 | GNRA | homologous HL_5TBW_048 NA | |
| HL_6HHQ_161 | 1/AR/2253:2263 | No text annotation | homologous HL_5TBW_049 NA | |
| HL_6HHQ_162 | 1/AR/2292:2300 | No text annotation | homologous HL_5TBW_050 NA | |
| HL_6HHQ_163 | 1/AR/2369:2378 | No text annotation | homologous HL_5TBW_051 NA | |
| HL_6HHQ_165 | 1/AR/2568:2573 | No text annotation | homologous HL_5TBW_053 NA | |
| HL_6HHQ_166 | 1/AR/2616:2624 | No text annotation | homologous HL_5TBW_054 NA | |
| HL_6HHQ_167 | 1/AR/2633:2645 | No text annotation | homologous HL_5TBW_055 NA | |
| HL_6HHQ_168 | 1/AR/2673:2681 | No text annotation | homologous HL_5TBW_056 NA | |
| HL_6HHQ_169 | 1/AR/2693:2700 | Pseudoknot geometry | homologous HL_5TBW_057 NA | |
| HL_6HHQ_170 | 1/AR/2724:2732 | No text annotation | homologous HL_5TBW_058 NA | |
| HL_6HHQ_171 | 1/AR/2744:2749 | GNRA | homologous HL_5TBW_059 NA | |
| HL_6HHQ_172 | 1/AR/2776:2784 | Pseudoknot geometry | homologous HL_5TBW_060 NA | |
| HL_6HHQ_173 | 1/AR/2840:2848 | No text annotation | homologous HL_5TBW_061 NA | |
| HL_6HHQ_174 | 1/AR/2897:2904 | No text annotation | homologous HL_5TBW_062 NA | |
| HL_6HHQ_175 | 1/AR/2920:2926 | No text annotation | geometric HL_5TBW_063 NA | |
| HL_6HHQ_176 | 1/AR/2963:2968 | GNRA | homologous HL_5TBW_064 NA | |
| HL_6HHQ_177 | 1/AR/3025:3030 | GNRA | geometric HL_5TBW_065 NA | |
| HL_6HHQ_178 | 1/AR/3068:3073 | Ribsomal LSU H95 | homologous HL_5TBW_066 NA | |
| HL_6HHQ_179 | 1/AR/3110:3124 | No text annotation | homologous HL_5TBW_067 NA | |
| HL_6HHQ_234 | 1/AR/3193:3199 | No text annotation | homologous HL_8P9A_179 HL_08100.1 | |
| HL_6HHQ_180 | 1/AR/3194:3197 | No text annotation | geometric HL_5TBW_068 NA | |
| HL_6HHQ_181 | 1/AR/3240:3247 | No text annotation | homologous HL_5TBW_069 NA | |
| HL_6HHQ_182 | 1/AR/3303:3311 | No text annotation | geometric HL_5TBW_070 NA | |
| HL_6HHQ_183 | 1/AR/3350:3353 | Mini UNCG | geometric HL_6JOO_002 HL_48778.2 | |
| HL_6HHQ_235 | 1/AS/32:45 | No text annotation | homologous HL_8P9A_183 HL_13971.1 | |
| HL_6HHQ_184 | 1/AS/36:41 | No text annotation | geometric HL_5TBW_185 NA | |
| HL_6HHQ_185 | 1/AS/88:93 | GNRA | geometric HL_5TBW_186 NA | |
| HL_6HHQ_236 | 1/AT/47:56 | No text annotation | homologous HL_8P9A_186 HL_93438.2 | |
| HL_6HHQ_186 | 1/AT/69:89 | No text annotation | homologous HL_8P9A_187 HL_51921.1 | |
| HL_6HHQ_187 | 1/AT/108:114 | No text annotation | geometric HL_5TBW_075 NA | |
| HL_6HHQ_188 | 1/AT/124:129 | No text annotation | geometric HL_5TBW_076 NA | |
| HL_6HHQ_189 | 1/sR/7:17 | No text annotation | homologous HL_4V88_186 NA | |
| HL_6HHQ_190 | 1/sR/70:81 | No text annotation | homologous HL_4V88_187 NA | |
| HL_6HHQ_191 | 1/sR/154:160 | GNRA related | homologous HL_4V88_188 NA | |
| HL_6HHQ_193 | 1/sR/243:250 | T-loop with 1 bulged base | geometric HL_4V88_191 NA | |
| HL_6HHQ_194 | 1/sR/276:279 | Mini UNCG | geometric HL_5F9R_002 HL_48778.2 | |
| HL_6HHQ_195 | 1/sR/330:338 | GNRA related | homologous HL_4V88_193 NA | |
| HL_6HHQ_196 | 1/sR/368:373 | No text annotation | homologous HL_4V88_194 NA | |
| HL_6HHQ_197 | 1/sR/393:404 | No text annotation | homologous HL_4V88_195 NA | |
| HL_6HHQ_198 | 1/sR/414:419 | UNCG | homologous HL_4V88_196 NA | |
| HL_6HHQ_199 | 1/sR/450:456 | No text annotation | homologous HL_4V88_197 NA | |
| HL_6HHQ_200 | 1/sR/483:504 | No text annotation | homologous HL_8P9A_202 NA | |
| HL_6HHQ_201 | 1/sR/520:532 | No text annotation | homologous HL_4V88_199 NA | |
| HL_6HHQ_202 | 1/sR/569:574 | GNRA variation | homologous HL_4V88_200 NA | |
| HL_6HHQ_242 | 1/sR/715:723 | No text annotation | homologous HL_8P9A_235 HL_20535.2 | |
| HL_6HHQ_205 | 1/sR/764:772 | No text annotation | homologous HL_4V88_203 NA | |
| HL_6HHQ_206 | 1/sR/777:783 | No text annotation | homologous HL_4V88_204 NA | |
| HL_6HHQ_207 | 1/sR/829:843 | Pseudoknot geometry | homologous HL_4V88_205 NA | |
| HL_6HHQ_208 | 1/sR/900:909 | No text annotation | homologous HL_4V88_206 NA | |
| HL_6HHQ_209 | 1/sR/937:942 | GNRA | homologous HL_4V88_207 NA | |
| HL_6HHQ_210 | 1/sR/997:1007 | No text annotation | homologous HL_4V88_208 NA | |
| HL_6HHQ_211 | 1/sR/1055:1064 | No text annotation | homologous HL_4V88_209 NA | |
| HL_6HHQ_212 | 1/sR/1084:1089 | GNRA | homologous HL_4V88_210 NA | |
| HL_6HHQ_213 | 1/sR/1121:1126 | GNRA | homologous HL_4V88_211 NA | |
| HL_6HHQ_214 | 1/sR/1188:1197 | No text annotation | homologous HL_4V88_212 NA | |
| HL_6HHQ_215 | 1/sR/1238:1247 | Anticodon loop related | homologous HL_4V88_213 NA | |
| HL_6HHQ_216 | 1/sR/1296:1301 | GNRA | homologous HL_4V88_214 NA | |
| HL_6HHQ_217 | 1/sR/1309:1316 | No text annotation | homologous HL_4V88_215 NA | |
| HL_6HHQ_218 | 1/sR/1359:1364 | No text annotation | homologous HL_4V88_216 NA | |
| HL_6HHQ_219 | 1/sR/1396:1402 | GNRA | homologous HL_4V88_217 NA | |
| HL_6HHQ_220 | 1/sR/1501:1506 | GNRA | homologous HL_4V88_218 NA | |
| HL_6HHQ_221 | 1/sR/1550:1561 | No text annotation | homologous HL_4V88_219 NA | |
| HL_6HHQ_222 | 1/sR/1594:1602 | No text annotation | homologous HL_4V88_220 NA | |
| HL_6HHQ_224 | 1/sR/1778:1783 | GNRA variation | homologous HL_4V88_222 NA |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_6HHQ_225 | No text annotation | ||
| HL_6HHQ_027 | No text annotation | ||
| HL_6HHQ_028 | No text annotation | ||
| HL_6HHQ_226 | No text annotation | ||
| HL_6HHQ_043 | No text annotation | ||
| HL_6HHQ_051 | No text annotation | ||
| HL_6HHQ_052 | No text annotation | ||
| HL_6HHQ_228 | No text annotation | ||
| HL_6HHQ_081 | No text annotation | ||
| HL_6HHQ_083 | Mini UNCG | ||
| HL_6HHQ_089 | No text annotation | ||
| HL_6HHQ_229 | No text annotation | ||
| HL_6HHQ_111 | No text annotation | ||
| HL_6HHQ_239 | No text annotation | ||
| HL_6HHQ_124 | No text annotation | ||
| HL_6HHQ_230 | No text annotation | ||
| HL_6HHQ_135 | GNRA | ||
| HL_6HHQ_231 | No text annotation | ||
| HL_6HHQ_241 | No text annotation | ||
| HL_6HHQ_146 | No text annotation | ||
| HL_6HHQ_151 | No text annotation | ||
| HL_6HHQ_156 | No text annotation | ||
| HL_6HHQ_232 | No text annotation | ||
| HL_6HHQ_164 | No text annotation | ||
| HL_6HHQ_233 | No text annotation | ||
| HL_6HHQ_192 | No text annotation | ||
| HL_6HHQ_203 | No text annotation | ||
| HL_6HHQ_237 | No text annotation | ||
| HL_6HHQ_204 | No text annotation | ||
| HL_6HHQ_238 | No text annotation | ||
| HL_6HHQ_223 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_6HHQ_002 | 1/1/7:8, 1/4/150:152 | Single bulged C | homologous IL_5TBW_002 NA | |
| IL_6HHQ_003 | 1/1/13:15, 1/4/144:145 | Single bulged U | homologous IL_5TBW_003 NA | |
| IL_6HHQ_004 | 1/1/27:28, 1/1/56:58 | Single stack bend | homologous IL_5TBW_004 NA | |
| IL_6HHQ_005 | 1/1/31:38, 1/1/45:53 | tSH-tHW-tHH-tHS | geometric IL_5TBW_005 NA | |
| IL_6HHQ_006 | 1/1/82:89, 1/1/97:103 | 8x7 Sarcin-Ricin; G-bulge | homologous IL_5TBW_006 NA | |
| IL_6HHQ_007 | 1/1/123:124, 1/1/144:149 | No text annotation | geometric IL_5TBW_007 NA | |
| IL_6HHQ_008 | 1/1/125:127, 1/1/141:143 | Isolated non-canonical cWW pair | homologous IL_5TBW_008 NA | |
| IL_6HHQ_009 | 1/1/163:165, 1/1/257:258 | Single stack bend | homologous IL_5TBW_009 NA | |
| IL_6HHQ_010 | 1/1/169:170, 1/1/248:253 | No text annotation | homologous IL_5TBW_010 NA | |
| IL_6HHQ_500 | 1/1/177:178, 1/1/238:241 | No text annotation | ||
| IL_6HHQ_012 | 1/1/189:191, 1/1/204:205 | Single bulged U | homologous IL_5TBW_012 NA | |
| IL_6HHQ_013 | 1/1/337:339, 1/4/25:26 | Single bulged A | homologous IL_5TBW_013 NA | |
| IL_6HHQ_014 | 1/1/376:379, 1/1/390:403 | No text annotation | homologous IL_8C3A_015 NA | |
| IL_6HHQ_015 | 1/1/404:410, 1/4/13:19 | Triple sheared with non-canonical cWW | geometric IL_5TBW_015 NA | |
| IL_6HHQ_016 | 1/1/429:431, 1/1/628:630 | Isolated non-canonical cWW pair | homologous IL_5TBW_016 NA | |
| IL_6HHQ_018 | 1/1/512:513, 1/1/577:579 | Single bulged A | homologous IL_5TBW_018 NA | |
| IL_6HHQ_019 | 1/1/517:525, 1/1/567:573 | No text annotation | homologous IL_5TBW_019 NA | |
| IL_6HHQ_020 | 1/1/531:538, 1/1/553:561 | No text annotation | homologous IL_5TBW_020 NA | |
| IL_6HHQ_021 | 1/1/668:670, 1/1/792:794 | Isolated non-canonical cWW pair | homologous IL_5TBW_021 NA | |
| IL_6HHQ_022 | 1/1/680:684, 1/1/696:700 | No text annotation | homologous IL_5TBW_022 NA | |
| IL_6HHQ_023 | 1/1/725:728, 1/1/741:745 | UAA/GAN | homologous IL_5TBW_023 NA | |
| IL_6HHQ_024 | 1/1/752:753, 1/1/779:781 | Single bulged A | homologous IL_5TBW_024 NA | |
| IL_6HHQ_025 | 1/1/755:756, 1/1/775:777 | Single bulged U | homologous IL_5TBW_025 NA | |
| IL_6HHQ_026 | 1/1/758:763, 1/1/768:773 | No text annotation | geometric IL_5TBW_026 NA | |
| IL_6HHQ_027 | 1/1/803:805, 1/1/938:940 | Isolated non-canonical cWW pair | homologous IL_5TBW_027 NA | |
| IL_6HHQ_028 | 1/1/805:809, 1/1/931:938 | tHW-tHW cross-strand stack | geometric IL_5TBW_028 NA | |
| IL_6HHQ_029 | 1/1/833:834, 1/1/859:861 | Single bulged G | geometric IL_5TBW_029 NA | |
| IL_6HHQ_030 | 1/1/834:838, 1/1/855:859 | Triple sheared | homologous IL_5TBW_030 NA | |
| IL_6HHQ_031 | 1/1/869:872, 1/1/888:890 | Major groove platform with extra cWW | homologous IL_5TBW_031 NA | |
| IL_6HHQ_032 | 1/1/873:875, 1/1/886:887 | Single bulged U | homologous IL_5TBW_032 NA | |
| IL_6HHQ_033 | 1/1/907:909, 1/1/919:923 | Multiple bulged bases | homologous IL_5TBW_033 NA | |
| IL_6HHQ_034 | 1/1/954:956, 1/1/965:967 | Isolated non-canonical cWW pair | homologous IL_5TBW_034 NA | |
| IL_6HHQ_035 | 1/1/969:970, 1/1/1111:1113 | Single stack bend | homologous IL_5TBW_035 NA | |
| IL_6HHQ_036 | 1/1/977:981, 1/1/1102:1104 | 180 degree turn | homologous IL_5TBW_036 NA | |
| IL_6HHQ_037 | 1/1/983:985, 1/1/1099:1100 | Single bulged G | homologous IL_5TBW_037 NA | |
| IL_6HHQ_038 | 1/1/991:997, 1/1/1052:1058 | 7x7 Sarcin-Ricin with intercalated A; G-bulge | geometric IL_5TBW_038 NA | |
| IL_6HHQ_039 | 1/1/997:998, 1/1/1050:1052 | Minor groove platform | homologous IL_5TBW_039 NA | |
| IL_6HHQ_040 | 1/1/999:1004, 1/1/1046:1049 | C-loop | homologous IL_5TBW_040 NA | |
| IL_6HHQ_041 | 1/1/1006:1009, 1/1/1041:1044 | Tandem non-canonical cWW pairs | homologous IL_5TBW_041 NA | |
| IL_6HHQ_042 | 1/1/1009:1011, 1/1/1039:1041 | Isolated non-canonical cWW pair | geometric IL_5TBW_042 NA | |
| IL_6HHQ_466 | 1/1/1014:1018, 1/1/1034:1036 | No text annotation | homologous IL_8P9A_271 IL_11415.1 | |
| IL_6HHQ_044 | 1/1/1069:1071, 1/1/1087:1089 | Isolated non-canonical cWW pair | homologous IL_5TBW_044 NA | |
| IL_6HHQ_045 | 1/1/1074:1076, 1/1/1083:1084 | Single bulged A | geometric IL_5TBW_045 NA | |
| IL_6HHQ_046 | 1/1/1120:1122, 1/1/1136:1138 | Isolated non-canonical cWW pair | homologous IL_5TBW_046 NA | |
| IL_6HHQ_048 | 1/1/1167:1171, 1/1/1328:1332 | UAA/GAN | homologous IL_5TBW_048 NA | |
| IL_6HHQ_049 | 1/1/1173:1180, 1/1/1325:1326 | SSU/LSU pseudoknot | geometric IL_5TBW_049 NA | |
| IL_6HHQ_050 | 1/1/1180:1182, 1/1/1324:1325 | Single bulged U | homologous IL_5TBW_050 NA | |
| IL_6HHQ_051 | 1/1/1187:1194, 1/1/1314:1319 | No text annotation | geometric IL_5TBW_051 NA | |
| IL_6HHQ_052 | 1/1/1194:1205, 1/1/1299:1314 | No text annotation | geometric IL_5TBW_052 NA | |
| IL_6HHQ_053 | 1/1/1207:1209, 1/1/1296:1297 | Single bulged U | homologous IL_5TBW_053 NA | |
| IL_6HHQ_054 | 1/1/1218:1226, 1/1/1283:1287 | Kink-turn | homologous IL_5TBW_054 NA | |
| IL_6HHQ_468 | 1/1/1230:1238, 1/1/1250:1279 | No text annotation | ||
| IL_6HHQ_055 | 1/1/1234:1239, 1/1/1249:1254 | No text annotation | ||
| IL_6HHQ_056 | 1/1/1376:1378, 1/1/1428:1431 | Isolated cWS basepair | homologous IL_5TBW_057 NA | |
| IL_6HHQ_057 | 1/1/1385:1387, 1/1/1420:1421 | Single bulged A | homologous IL_5TBW_058 NA | |
| IL_6HHQ_058 | 1/1/1388:1395, 1/1/1415:1419 | Kink-turn | homologous IL_5TBW_059 NA | |
| IL_6HHQ_059 | 1/1/1398:1400, 1/1/1411:1412 | Single bulged A | homologous IL_5TBW_060 NA | |
| IL_6HHQ_060 | 1/1/1444:1450, 1/1/2354:2359 | 7x6 Sarcin-Ricin; G-bulge | homologous IL_5TBW_061 NA | |
| IL_6HHQ_469 | 1/1/1501:1505, 1/1/1513:1515 | C-loop | homologous IL_8P9A_290 IL_63596.11 | |
| IL_6HHQ_062 | 1/1/1532:1536, 1/1/1585:1590 | UAA/GAN | homologous IL_5TBW_063 NA | |
| IL_6HHQ_063 | 1/1/1537:1542, 1/1/1551:1584 | No text annotation | ||
| IL_6HHQ_064 | 1/1/1618:1621, 1/1/1824:1826 | Other IL | homologous IL_5TBW_064 NA | |
| IL_6HHQ_065 | 1/1/1623:1624, 1/1/1819:1822 | Multiple bulged bases | geometric IL_4YAZ_007 IL_82107.4 | |
| IL_6HHQ_066 | 1/1/1627:1631, 1/1/1811:1816 | No text annotation | homologous IL_5TBW_066 NA | |
| IL_6HHQ_067 | 1/1/1645:1649, 1/1/1806:1810 | Triple sheared | homologous IL_5TBW_067 NA | |
| IL_6HHQ_068 | 1/1/1661:1663, 1/1/1786:1788 | Isolated non-canonical cWW pair | homologous IL_5TBW_068 NA | |
| IL_6HHQ_069 | 1/1/1669:1670, 1/1/1778:1780 | Single bulged C | geometric IL_5TBW_069 NA | |
| IL_6HHQ_070 | 1/1/1670:1671, 1/1/1776:1778 | Single stack bend | homologous IL_5TBW_070 NA | |
| IL_6HHQ_071 | 1/1/1694:1698, 1/1/1747:1752 | No text annotation | homologous IL_5TBW_071 NA | |
| IL_6HHQ_072 | 1/1/1702:1707, 1/1/1737:1743 | No text annotation | homologous IL_5TBW_072 NA | |
| IL_6HHQ_073 | 1/1/1711:1717, 1/1/1727:1733 | Kink-turn | homologous IL_5TBW_073 NA | |
| IL_6HHQ_074 | 1/1/1883:1889, 1/1/2346:2349 | No text annotation | homologous IL_5TBW_074 NA | |
| IL_6HHQ_075 | 1/1/1895:1897, 1/1/2338:2340 | Isolated tWW turn | homologous IL_5TBW_075 NA | |
| IL_6HHQ_076 | 1/1/1898:1901, 1/1/2336:2337 | Major groove platform; stack outside cWW | geometric IL_5TBW_076 NA | |
| IL_6HHQ_471 | 1/1/1898:1906, 1/1/2333:2337 | No text annotation | homologous IL_8P9A_305 IL_22854.4 | |
| IL_6HHQ_077 | 1/1/1901:1906, 1/1/2333:2336 | Intercalated tWH | homologous IL_5TBW_077 NA | |
| IL_6HHQ_078 | 1/1/1918:1923, 1/1/1928:1934 | tSH-tSH-tHH-tHS | homologous IL_5TBW_078 NA | |
| IL_6HHQ_079 | 1/1/1940:1942, 1/1/2106:2108 | Isolated non-canonical cWW pair | homologous IL_5TBW_079 NA | |
| IL_6HHQ_080 | 1/1/1947:1948, 1/1/2098:2101 | No text annotation | homologous IL_5TBW_080 NA | |
| IL_6HHQ_081 | 1/1/1951:1953, 1/1/2094:2095 | Single stack bend | homologous IL_5TBW_081 NA | |
| IL_6HHQ_082 | 1/1/2128:2129, 1/1/2323:2325 | Single bulged A | homologous IL_5TBW_082 NA | |
| IL_6HHQ_083 | 1/1/2156:2161, 1/1/2173:2180 | Kink-turn related | homologous IL_5TBW_083 NA | |
| IL_6HHQ_084 | 1/1/2196:2199, 1/1/2245:2246 | Major groove intercalation | homologous IL_5TBW_084 NA | |
| IL_6HHQ_085 | 1/1/2200:2201, 1/1/2241:2244 | Major groove intercalation | homologous IL_5TBW_085 NA | |
| IL_6HHQ_086 | 1/1/2204:2206, 1/1/2237:2238 | Single bulged U | homologous IL_5TBW_086 NA | |
| IL_6HHQ_087 | 1/1/2206:2210, 1/1/2235:2237 | Major groove platform with extra pair | geometric IL_5TBW_087 NA | |
| IL_6HHQ_088 | 1/1/2211:2217, 1/1/2228:2234 | No text annotation | homologous IL_5TBW_088 NA | |
| IL_6HHQ_089 | 1/1/2276:2277, 1/1/2307:2310 | Bulged stacked bases | geometric IL_5TBW_089 NA | |
| IL_6HHQ_090 | 1/1/2277:2288, 1/1/2304:2307 | No text annotation | homologous IL_5TBW_090 NA | |
| IL_6HHQ_091 | 1/1/2391:2394, 1/1/2986:2988 | Major groove platform with extra pair | homologous IL_5TBW_091 NA | |
| IL_6HHQ_092 | 1/1/2396:2398, 1/1/2981:2984 | Major groove platform with intercalation | homologous IL_5TBW_092 NA | |
| IL_6HHQ_093 | 1/1/2409:2411, 1/1/2811:2812 | Single bulged U | homologous IL_5TBW_093 NA | |
| IL_6HHQ_094 | 1/1/2412:2413, 1/1/2807:2810 | Minor groove platform | homologous IL_5TBW_094 NA | |
| IL_6HHQ_095 | 1/1/2423:2425, 1/1/2604:2607 | Isolated tHS basepair with bulges | homologous IL_5TBW_095 NA | |
| IL_6HHQ_096 | 1/1/2520:2526, 1/1/2584:2587 | No text annotation | homologous IL_5TBW_096 NA | |
| IL_6HHQ_097 | 1/1/2529:2563, 1/1/2578:2581 | No text annotation | ||
| IL_6HHQ_098 | 1/1/2614:2615, 1/1/2625:2627 | Single bulged A | homologous IL_5TBW_098 NA | |
| IL_6HHQ_099 | 1/1/2666:2668, 1/1/2686:2690 | Isolated tHS basepair with bulges | geometric IL_5TBW_099 NA | |
| IL_6HHQ_100 | 1/1/2718:2721, 1/1/2735:2738 | Tandem non-canonical cWW pairs | homologous IL_5TBW_100 NA | |
| IL_6HHQ_101 | 1/1/2770:2773, 1/1/2787:2788 | Single stack bend with bulge | homologous IL_5TBW_101 NA | |
| IL_6HHQ_102 | 1/1/2823:2824, 1/1/2865:2867 | Major groove platform | geometric IL_5TBW_102 NA | |
| IL_6HHQ_103 | 1/1/2824:2826, 1/1/2863:2865 | Isolated non-canonical cWW pair | homologous IL_5TBW_103 NA | |
| IL_6HHQ_104 | 1/1/2826:2828, 1/1/2862:2863 | Major groove platform | geometric IL_5TBW_104 NA | |
| IL_6HHQ_105 | 1/1/2828:2830, 1/1/2858:2862 | Major groove minor groove platform with extra cWW | homologous IL_5TBW_105 NA | |
| IL_6HHQ_106 | 1/1/2835:2839, 1/1/2849:2853 | Triple sheared | homologous IL_5TBW_106 NA | |
| IL_6HHQ_107 | 1/1/2876:2877, 1/1/2949:2951 | Major groove platform | homologous IL_5TBW_107 NA | |
| IL_6HHQ_108 | 1/1/2879:2881, 1/1/2943:2947 | Isolated non-canonical cWW with bulges | geometric IL_5TBW_108 NA | |
| IL_6HHQ_109 | 1/1/2881:2882, 1/1/2940:2943 | Multiple bulged bases | homologous IL_5TBW_109 NA | |
| IL_6HHQ_110 | 1/1/2889:2891, 1/1/2912:2914 | Isolated non-canonical cWW pair | homologous IL_5TBW_110 NA | |
| IL_6HHQ_472 | 1/1/2889:2892, 1/1/2909:2914 | No text annotation | homologous IL_8P9A_338 IL_07469.2 | |
| IL_6HHQ_111 | 1/1/2891:2892, 1/1/2909:2912 | Major groove platform with intercalation | geometric IL_5TBW_111 NA | |
| IL_6HHQ_112 | 1/1/2918:2920, 1/1/2926:2928 | Isolated non-canonical cWW pair | homologous IL_5TBW_112 NA | |
| IL_6HHQ_113 | 1/1/2960:2961, 1/1/2970:2972 | Single bulged A | geometric IL_7A0S_002 IL_31462.5 | |
| IL_6HHQ_114 | 1/1/3004:3007, 1/1/3139:3144 | Double sheared | homologous IL_5TBW_114 NA | |
| IL_6HHQ_115 | 1/1/3012:3014, 1/1/3040:3042 | Isolated non-canonical cWW pair | homologous IL_5TBW_115 NA | |
| IL_6HHQ_116 | 1/1/3018:3025, 1/1/3030:3036 | 8x7 Sarcin-Ricin; G-bulge | homologous IL_5TBW_116 NA | |
| IL_6HHQ_117 | 1/1/3047:3051, 1/1/3091:3094 | Major groove minor groove platform with tHH | homologous IL_5TBW_117 NA | |
| IL_6HHQ_118 | 1/1/3054:3059, 1/1/3084:3088 | UAA/GAN related | homologous IL_5TBW_118 NA | |
| IL_6HHQ_119 | 1/1/3063:3064, 1/1/3077:3080 | Multiple bulged bases | homologous IL_5TBW_119 NA | |
| IL_6HHQ_120 | 1/1/3103:3107, 1/1/3127:3131 | UAA/GAN | homologous IL_5TBW_120 NA | |
| IL_6HHQ_121 | 1/1/3162:3166, 1/1/3284:3288 | No text annotation | homologous IL_5TBW_121 NA | |
| IL_6HHQ_122 | 1/1/3168:3170, 1/1/3280:3282 | Isolated non-canonical cWW pair | homologous IL_5TBW_122 NA | |
| IL_6HHQ_123 | 1/1/3177:3179, 1/1/3210:3211 | Single bulged A | homologous IL_5TBW_123 NA | |
| IL_6HHQ_124 | 1/1/3179:3188, 1/1/3204:3210 | No text annotation | geometric IL_5TBW_124 NA | |
| IL_6HHQ_125 | 1/1/3193:3194, 1/1/3197:3199 | Single bulged U | homologous IL_5TBW_125 NA | |
| IL_6HHQ_126 | 1/1/3225:3229, 1/1/3258:3260 | No text annotation | homologous IL_5TBW_126 NA | |
| IL_6HHQ_127 | 1/1/3233:3235, 1/1/3252:3254 | Isolated non-canonical cWW pair | geometric IL_5TBW_127 NA | |
| IL_6HHQ_128 | 1/1/3235:3238, 1/1/3249:3252 | Tandem non-canonical cWW pairs | homologous IL_5TBW_128 NA | |
| IL_6HHQ_129 | 1/1/3300:3303, 1/1/3311:3314 | Tandem non-canonical cWW pairs | homologous IL_8C3A_135 NA | |
| IL_6HHQ_130 | 1/1/3324:3325, 1/1/3381:3383 | Single bulged U | homologous IL_5TBW_131 NA | |
| IL_6HHQ_131 | 1/1/3328:3330, 1/1/3373:3378 | Isolated non-canonical cWW pair | homologous IL_5TBW_132 NA | |
| IL_6HHQ_132 | 1/1/3332:3337, 1/1/3367:3371 | No text annotation | homologous IL_5TBW_133 NA | |
| IL_6HHQ_133 | 1/1/3340:3342, 1/1/3363:3364 | Single bulged U | homologous IL_5TBW_134 NA | |
| IL_6HHQ_134 | 1/1/3342:3345, 1/1/3360:3363 | Double sheared; A in syn | geometric IL_5TBW_135 NA | |
| IL_6HHQ_473 | 1/1/3345:3350, 1/1/3353:3360 | No text annotation | geometric IL_5TBW_476 NA | |
| IL_6HHQ_135 | 1/1/3349:3350, 1/1/3353:3356 | Multiple bulged bases | homologous IL_5TBW_136 NA | |
| IL_6HHQ_136 | 1/3/15:16, 1/3/63:65 | Single bulged A | homologous IL_5TBW_372 NA | |
| IL_6HHQ_137 | 1/3/21:27, 1/3/53:58 | Minor groove platform related | homologous IL_5TBW_373 NA | |
| IL_6HHQ_138 | 1/3/28:29, 1/3/49:52 | Minor groove platform | homologous IL_5TBW_374 NA | |
| IL_6HHQ_139 | 1/3/29:30, 1/3/47:49 | Single stack bend | geometric IL_5TBW_375 NA | |
| IL_6HHQ_140 | 1/3/32:36, 1/3/41:45 | Symmetric double minor groove platform | homologous IL_5TBW_376 NA | |
| IL_6HHQ_141 | 1/3/72:80, 1/3/100:106 | 8x7 Sarcin-Ricin; G-bulge | homologous IL_5TBW_377 NA | |
| IL_6HHQ_142 | 1/3/84:87, 1/3/94:96 | Isolated non-canonical cWW pair | homologous IL_5TBW_378 NA | |
| IL_6HHQ_143 | 1/4/64:66, 1/4/93:96 | Isolated non-canonical cWW pair | homologous IL_5TBW_145 NA | |
| IL_6HHQ_144 | 1/4/68:69, 1/4/89:91 | Single bulged U | geometric IL_5TBW_146 NA | |
| IL_6HHQ_145 | 1/A/24:26, 1/A/600:601 | Single bulged C | geometric IL_4V88_384 NA | |
| IL_6HHQ_146 | 1/A/35:37, 1/A/471:473 | Isolated non-canonical cWW pair | geometric IL_4V88_385 NA | |
| IL_6HHQ_147 | 1/A/37:41, 1/A/466:471 | Triple sheared related | geometric IL_4V88_386 NA | |
| IL_6HHQ_148 | 1/A/42:48, 1/A/431:433 | No text annotation | geometric IL_4V88_387 NA | |
| IL_6HHQ_149 | 1/A/50:52, 1/A/428:429 | Minor groove platform | geometric IL_5J7L_004 IL_51454.2 | |
| IL_6HHQ_150 | 1/A/58:63, 1/A/87:89 | No text annotation | geometric IL_4V88_389 NA | |
| IL_6HHQ_151 | 1/A/64:69, 1/A/82:86 | No text annotation | geometric IL_4V88_390 NA | |
| IL_6HHQ_152 | 1/A/109:112, 1/A/302:305 | Tandem non-canonical cWW pairs | geometric IL_4V88_391 NA | |
| IL_6HHQ_153 | 1/A/113:116, 1/A/300:301 | Multiple bulged bases | geometric IL_4V88_392 NA | |
| IL_6HHQ_154 | 1/A/117:122, 1/A/295:299 | No text annotation | geometric IL_4V88_393 NA | |
| IL_6HHQ_155 | 1/A/143:149, 1/A/165:172 | tWH-tWH-tHW-tHW | geometric IL_4V88_394 NA | |
| IL_6HHQ_156 | 1/A/150:152, 1/A/162:164 | Isolated cWH basepair | geometric IL_3R1C_012 IL_10167.5 | |
| IL_6HHQ_157 | 1/A/186:189, 1/A/196:199 | Double sheared | geometric IL_4V88_396 NA | |
| IL_6HHQ_158 | 1/A/204:206, 1/A/259:263 | Major groove platform with extra cWW | geometric IL_4V88_397 NA | |
| IL_6HHQ_159 | 1/A/206:208, 1/A/257:259 | Isolated non-canonical cWW pair | geometric IL_4V88_398 NA | |
| IL_6HHQ_160 | 1/A/265:267, 1/A/288:289 | Single bulged A | geometric IL_4V88_399 NA | |
| IL_6HHQ_161 | 1/A/270:273, 1/A/283:285 | No text annotation | geometric IL_4V88_400 NA | |
| IL_6HHQ_474 | 1/A/270:276, 1/A/279:285 | No text annotation | ||
| IL_6HHQ_162 | 1/A/274:276, 1/A/279:282 | Intercalated cWW | geometric IL_7RQB_025 NA | |
| IL_6HHQ_163 | 1/A/311:316, 1/A/348:355 | Kink-turn with non-sequential stacking | geometric IL_4V88_402 NA | |
| IL_6HHQ_164 | 1/A/318:323, 1/A/345:346 | No text annotation | geometric IL_5Y58_001 IL_59877.1 | |
| IL_6HHQ_165 | 1/A/363:365, 1/A/376:381 | No text annotation | geometric IL_4V88_404 NA | |
| IL_6HHQ_166 | 1/A/389:391, 1/A/406:408 | Isolated cWH basepair | geometric IL_4V88_405 NA | |
| IL_6HHQ_167 | 1/A/411:413, 1/A/420:422 | Isolated near basepair | geometric IL_4V88_406 NA | |
| IL_6HHQ_168 | 1/A/439:441, 1/A/463:464 | Single bulged U | geometric IL_4V88_407 NA | |
| IL_6HHQ_501 | 1/A/443:447, 1/A/460:461 | No text annotation | homologous IL_8P9A_397 IL_03109.3 | |
| IL_6HHQ_502 | 1/A/447:448, 1/A/458:460 | Single bulged G | homologous IL_8P9A_398 IL_00225.13 | |
| IL_6HHQ_475 | 1/A/517:518, 1/A/533:535 | Minor groove platform | homologous IL_8C3A_501 NA | |
| IL_6HHQ_171 | 1/A/518:520, 1/A/532:533 | Minor groove platform | geometric IL_4V88_412 NA | |
| IL_6HHQ_172 | 1/A/550:557, 1/A/587:588 | SSU/LSU pseudoknot | geometric IL_4V88_413 NA | |
| IL_6HHQ_173 | 1/A/557:559, 1/A/586:587 | Single bulged U | geometric IL_5J7L_017 IL_89505.4 | |
| IL_6HHQ_174 | 1/A/562:568, 1/A/575:583 | Kink-turn related | homologous IL_8C3A_425 NA | |
| IL_6HHQ_175 | 1/A/616:622, 1/A/1104:1105 | No text annotation | geometric IL_4V88_416 NA | |
| IL_6HHQ_176 | 1/A/624:626, 1/A/973:975 | Isolated non-canonical cWW pair | geometric IL_4V88_417 NA | |
| IL_6HHQ_177 | 1/A/627:631, 1/A/968:972 | tSH-tHW-tHS | geometric IL_4V88_418 NA | |
| IL_6HHQ_178 | 1/A/646:648, 1/A/686:688 | Isolated non-canonical cWW pair | geometric IL_4V88_419 NA | |
| IL_6HHQ_503 | 1/A/746:747, 1/A/802:805 | No text annotation | homologous IL_8CRE_428 IL_68140.4 | |
| IL_6HHQ_181 | 1/A/748:750, 1/A/799:801 | Isolated non-canonical cWW pair | geometric IL_5J7L_326 IL_28037.2 | |
| IL_6HHQ_476 | 1/A/751:759, 1/A/791:798 | No text annotation | homologous IL_8P9A_414 IL_59049.1 | |
| IL_6HHQ_183 | 1/A/817:822, 1/A/850:854 | No text annotation | ||
| IL_6HHQ_477 | 1/A/817:827, 1/A/845:854 | No text annotation | ||
| IL_6HHQ_184 | 1/A/865:866, 1/A/962:965 | Major groove platform; stack outside cWW | geometric IL_4V88_428 NA | |
| IL_6HHQ_478 | 1/A/868:870, 1/A/957:960 | Isolated non-canonical cWW pair | homologous IL_8P9A_418 IL_57744.1 | |
| IL_6HHQ_186 | 1/A/871:874, 1/A/953:956 | Tandem non-canonical cWW pairs | geometric IL_4V88_430 NA | |
| IL_6HHQ_187 | 1/A/874:878, 1/A/950:953 | Tandem non-canonical cWW pairs | geometric IL_4V88_431 NA | |
| IL_6HHQ_188 | 1/A/885:888, 1/A/924:927 | Tandem non-canonical cWW pairs | geometric IL_4V88_432 NA | |
| IL_6HHQ_189 | 1/A/893:895, 1/A/917:919 | Isolated non-canonical cWW pair | geometric IL_4V88_433 NA | |
| IL_6HHQ_479 | 1/A/893:899, 1/A/910:919 | No text annotation | homologous IL_8P9A_422 IL_57741.1 | |
| IL_6HHQ_190 | 1/A/895:899, 1/A/910:917 | Kink-turn | geometric IL_4V88_434 NA | |
| IL_6HHQ_191 | 1/A/985:990, 1/A/1014:1016 | Other IL | geometric IL_4V88_435 NA | |
| IL_6HHQ_192 | 1/A/990:994, 1/A/1010:1014 | tSH-tHW-tHS | geometric IL_4V88_436 NA | |
| IL_6HHQ_193 | 1/A/1034:1036, 1/A/1095:1101 | No text annotation | geometric IL_4V88_437 NA | |
| IL_6HHQ_194 | 1/A/1041:1044, 1/A/1074:1077 | Tandem non-canonical cWW pairs | geometric IL_4V88_438 NA | |
| IL_6HHQ_195 | 1/A/1050:1053, 1/A/1066:1068 | No text annotation | geometric IL_7RQB_034 NA | |
| IL_6HHQ_196 | 1/A/1111:1118, 1/A/1129:1134 | 8x6 Sarcin-Ricin with inserted Y; G-bulge | geometric IL_4V88_440 NA | |
| IL_6HHQ_197 | 1/A/1146:1147, 1/A/1630:1632 | Single bulged A | geometric IL_4LFB_035 IL_31462.5 | |
| IL_6HHQ_198 | 1/A/1149:1151, 1/A/1627:1628 | Single bulged G | geometric IL_4V88_442 NA | |
| IL_6HHQ_480 | 1/A/1157:1160, 1/A/1617:1621 | C-loop | homologous IL_8C3A_449 NA | |
| IL_6HHQ_200 | 1/A/1173:1175, 1/A/1464:1466 | Isolated non-canonical cWW pair | geometric IL_4V88_444 NA | |
| IL_6HHQ_201 | 1/A/1178:1179, 1/A/1459:1461 | Minor groove platform | geometric IL_4V88_445 NA | |
| IL_6HHQ_202 | 1/A/1213:1215, 1/A/1448:1450 | Isolated non-canonical cWW pair | geometric IL_4V88_446 NA | |
| IL_6HHQ_504 | 1/A/1224:1230, 1/A/1257:1259 | No text annotation | ||
| IL_6HHQ_505 | 1/A/1224:1233, 1/A/1252:1259 | No text annotation | homologous IL_8P9A_470 IL_28304.1 | |
| IL_6HHQ_204 | 1/A/1230:1233, 1/A/1252:1257 | No text annotation | ||
| IL_6HHQ_205 | 1/A/1234:1236, 1/A/1249:1251 | No text annotation | geometric IL_4V88_448 NA | |
| IL_6HHQ_206 | 1/A/1268:1270, 1/A/1440:1441 | Single bulged U | geometric IL_4V88_449 NA | |
| IL_6HHQ_207 | 1/A/1272:1276, 1/A/1436:1438 | Isolated cWS basepair | geometric IL_4V88_450 NA | |
| IL_6HHQ_484 | 1/A/1272:1278, 1/A/1430:1438 | No text annotation | homologous IL_8P9A_439 IL_86012.1 | |
| IL_6HHQ_208 | 1/A/1276:1278, 1/A/1430:1436 | Minor groove platform with extra cWW | geometric IL_4V88_451 NA | |
| IL_6HHQ_209 | 1/A/1280:1281, 1/A/1426:1428 | Single bulged A | geometric IL_4V88_452 NA | |
| IL_6HHQ_210 | 1/A/1290:1292, 1/A/1323:1325 | Isolated non-canonical cWW contact | geometric IL_5UNE_001 IL_44465.1 | |
| IL_6HHQ_211 | 1/A/1306:1308, 1/A/1317:1318 | Minor groove platform | geometric IL_4V88_454 NA | |
| IL_6HHQ_212 | 1/A/1339:1342, 1/A/1383:1385 | Isolated non-canonical cWW pair | geometric IL_4V88_455 NA | |
| IL_6HHQ_506 | 1/A/1345:1348, 1/A/1377:1380 | No text annotation | homologous IL_8P9A_445 IL_78800.1 | |
| IL_6HHQ_485 | 1/A/1352:1354, 1/A/1369:1373 | Isolated non-canonical cWW pair | geometric IL_5B2P_002 IL_07785.1 | |
| IL_6HHQ_215 | 1/A/1389:1391, 1/A/1407:1412 | Major groove platform; stack outside cWW | geometric IL_4V88_458 NA | |
| IL_6HHQ_507 | 1/A/1480:1487, 1/A/1519:1527 | No text annotation | homologous IL_8P9A_448 IL_91698.1 | |
| IL_6HHQ_216 | 1/A/1488:1494, 1/A/1513:1518 | 180 degree turn | geometric IL_4V88_460 NA | |
| IL_6HHQ_217 | 1/A/1495:1498, 1/A/1509:1512 | Tandem non-canonical cWW pairs | geometric IL_4V88_461 NA | |
| IL_6HHQ_218 | 1/A/1540:1545, 1/A/1566:1571 | No text annotation | geometric IL_4V88_462 NA | |
| IL_6HHQ_219 | 1/A/1636:1638, 1/A/1764:1767 | No text annotation | geometric IL_4V88_463 NA | |
| IL_6HHQ_220 | 1/A/1638:1641, 1/A/1760:1764 | No text annotation | geometric IL_4V88_464 NA | |
| IL_6HHQ_221 | 1/A/1642:1644, 1/A/1757:1759 | Isolated non-canonical cWW pair | geometric IL_4V88_465 NA | |
| IL_6HHQ_222 | 1/A/1644:1647, 1/A/1753:1757 | Non canonical cWW and near pair | geometric IL_4V88_466 NA | |
| IL_6HHQ_223 | 1/A/1650:1652, 1/A/1748:1750 | Isolated non-canonical cWW pair | geometric IL_5ED1_002 IL_87907.2 | |
| IL_6HHQ_224 | 1/A/1653:1656, 1/A/1744:1747 | Double sheared | geometric IL_4V88_468 NA | |
| IL_6HHQ_225 | 1/A/1656:1658, 1/A/1743:1744 | Single bulged U | geometric IL_6CZR_156 NA | |
| IL_6HHQ_226 | 1/A/1665:1667, 1/A/1734:1736 | Isolated non-canonical cWW pair | geometric IL_4V88_470 NA | |
| IL_6HHQ_227 | 1/A/1669:1672, 1/A/1729:1732 | Double sheared | geometric IL_4V88_471 NA | |
| IL_6HHQ_228 | 1/A/1672:1674, 1/A/1727:1729 | Isolated non-canonical cWW pair | geometric IL_4V88_472 NA | |
| IL_6HHQ_229 | 1/A/1675:1678, 1/A/1723:1726 | Tandem non-canonical cWW pairs | geometric IL_4V88_473 NA | |
| IL_6HHQ_230 | 1/A/1678:1682, 1/A/1719:1723 | Triple sheared | geometric IL_4V88_474 NA | |
| IL_6HHQ_232 | 1/AR/7:8, 1/AT/150:152 | Single bulged C | homologous IL_5TBW_002 NA | |
| IL_6HHQ_233 | 1/AR/13:15, 1/AT/144:145 | Single bulged U | homologous IL_8C3A_003 NA | |
| IL_6HHQ_234 | 1/AR/27:28, 1/AR/56:58 | Single stack bend | homologous IL_5TBW_004 NA | |
| IL_6HHQ_235 | 1/AR/31:38, 1/AR/45:53 | tSH-tHW-tHH-tHS | homologous IL_5TBW_005 NA | |
| IL_6HHQ_236 | 1/AR/82:89, 1/AR/97:103 | 8x7 Sarcin-Ricin; G-bulge | homologous IL_5TBW_006 NA | |
| IL_6HHQ_237 | 1/AR/123:124, 1/AR/144:149 | No text annotation | homologous IL_8C3A_007 NA | |
| IL_6HHQ_238 | 1/AR/125:127, 1/AR/141:143 | Isolated non-canonical cWW pair | homologous IL_8C3A_008 NA | |
| IL_6HHQ_239 | 1/AR/163:165, 1/AR/257:258 | Single stack bend | homologous IL_5TBW_009 NA | |
| IL_6HHQ_240 | 1/AR/169:173, 1/AR/245:253 | No text annotation | homologous IL_8P9A_239 IL_13358.1 | |
| IL_6HHQ_508 | 1/AR/177:178, 1/AR/238:241 | No text annotation | ||
| IL_6HHQ_242 | 1/AR/189:191, 1/AR/204:205 | Single bulged U | homologous IL_5TBW_012 NA | |
| IL_6HHQ_243 | 1/AR/337:339, 1/AT/25:26 | Single bulged A | homologous IL_5TBW_013 NA | |
| IL_6HHQ_244 | 1/AR/376:379, 1/AR/390:403 | No text annotation | homologous IL_5TBW_014 NA | |
| IL_6HHQ_245 | 1/AR/404:410, 1/AT/13:19 | Triple sheared with non-canonical cWW | homologous IL_5TBW_015 NA | |
| IL_6HHQ_246 | 1/AR/429:431, 1/AR/628:630 | Isolated non-canonical cWW pair | homologous IL_5TBW_016 NA | |
| IL_6HHQ_248 | 1/AR/512:513, 1/AR/577:579 | Single bulged A | homologous IL_5TBW_018 NA | |
| IL_6HHQ_249 | 1/AR/517:525, 1/AR/567:573 | No text annotation | homologous IL_5TBW_019 NA | |
| IL_6HHQ_250 | 1/AR/531:538, 1/AR/553:561 | No text annotation | homologous IL_5TBW_020 NA | |
| IL_6HHQ_251 | 1/AR/668:670, 1/AR/792:794 | Isolated non-canonical cWW pair | homologous IL_5TBW_021 NA | |
| IL_6HHQ_252 | 1/AR/680:684, 1/AR/696:700 | No text annotation | homologous IL_5TBW_022 NA | |
| IL_6HHQ_253 | 1/AR/725:728, 1/AR/741:745 | UAA/GAN | homologous IL_5TBW_023 NA | |
| IL_6HHQ_254 | 1/AR/752:753, 1/AR/779:781 | Single bulged A | homologous IL_5TBW_024 NA | |
| IL_6HHQ_255 | 1/AR/755:756, 1/AR/775:777 | Single bulged U | homologous IL_5TBW_025 NA | |
| IL_6HHQ_256 | 1/AR/758:763, 1/AR/768:773 | No text annotation | geometric IL_5TBW_026 NA | |
| IL_6HHQ_257 | 1/AR/803:805, 1/AR/938:940 | Isolated non-canonical cWW pair | geometric IL_5TBW_027 NA | |
| IL_6HHQ_258 | 1/AR/805:809, 1/AR/931:938 | tHW-tHW cross-strand stack | homologous IL_5TBW_028 NA | |
| IL_6HHQ_259 | 1/AR/833:834, 1/AR/859:861 | Single bulged G | geometric IL_5TBW_029 NA | |
| IL_6HHQ_260 | 1/AR/834:838, 1/AR/855:859 | Triple sheared | homologous IL_5TBW_030 NA | |
| IL_6HHQ_261 | 1/AR/869:872, 1/AR/888:890 | Major groove platform with extra cWW | homologous IL_5TBW_031 NA | |
| IL_6HHQ_262 | 1/AR/873:875, 1/AR/886:887 | Single bulged U | homologous IL_8C3A_035 NA | |
| IL_6HHQ_263 | 1/AR/907:909, 1/AR/919:923 | Multiple bulged bases | homologous IL_5TBW_033 NA | |
| IL_6HHQ_264 | 1/AR/954:956, 1/AR/965:967 | Isolated non-canonical cWW pair | homologous IL_5TBW_034 NA | |
| IL_6HHQ_265 | 1/AR/969:970, 1/AR/1111:1113 | Single stack bend | homologous IL_5TBW_035 NA | |
| IL_6HHQ_266 | 1/AR/977:981, 1/AR/1102:1104 | 180 degree turn | homologous IL_5TBW_036 NA | |
| IL_6HHQ_267 | 1/AR/983:985, 1/AR/1099:1100 | Single bulged G | homologous IL_5TBW_037 NA | |
| IL_6HHQ_268 | 1/AR/991:997, 1/AR/1052:1058 | 7x7 Sarcin-Ricin with intercalated A; G-bulge | homologous IL_5TBW_038 NA | |
| IL_6HHQ_269 | 1/AR/997:998, 1/AR/1050:1052 | Minor groove platform | geometric IL_5TBW_039 NA | |
| IL_6HHQ_270 | 1/AR/999:1004, 1/AR/1046:1049 | C-loop | homologous IL_5TBW_040 NA | |
| IL_6HHQ_271 | 1/AR/1006:1009, 1/AR/1041:1044 | Tandem non-canonical cWW pairs | geometric IL_5TBW_041 NA | |
| IL_6HHQ_272 | 1/AR/1009:1011, 1/AR/1039:1041 | Isolated non-canonical cWW pair | homologous IL_5TBW_042 NA | |
| IL_6HHQ_488 | 1/AR/1014:1018, 1/AR/1034:1036 | No text annotation | homologous IL_8P9A_271 IL_11415.1 | |
| IL_6HHQ_274 | 1/AR/1069:1071, 1/AR/1087:1089 | Isolated non-canonical cWW pair | homologous IL_8C3A_047 NA | |
| IL_6HHQ_275 | 1/AR/1074:1076, 1/AR/1083:1084 | Single bulged A | homologous IL_5TBW_045 NA | |
| IL_6HHQ_276 | 1/AR/1120:1122, 1/AR/1136:1138 | Isolated non-canonical cWW pair | homologous IL_5TBW_046 NA | |
| IL_6HHQ_277 | 1/AR/1167:1171, 1/AR/1328:1332 | UAA/GAN | homologous IL_5TBW_048 NA | |
| IL_6HHQ_278 | 1/AR/1173:1180, 1/AR/1325:1326 | SSU/LSU pseudoknot | geometric IL_5TBW_049 NA | |
| IL_6HHQ_279 | 1/AR/1180:1182, 1/AR/1324:1325 | Single bulged U | homologous IL_5TBW_050 NA | |
| IL_6HHQ_280 | 1/AR/1187:1194, 1/AR/1314:1319 | No text annotation | homologous IL_5TBW_051 NA | |
| IL_6HHQ_281 | 1/AR/1194:1205, 1/AR/1299:1314 | No text annotation | geometric IL_5TBW_052 NA | |
| IL_6HHQ_282 | 1/AR/1207:1209, 1/AR/1296:1297 | Single bulged U | homologous IL_5TBW_053 NA | |
| IL_6HHQ_283 | 1/AR/1218:1226, 1/AR/1283:1287 | Kink-turn | homologous IL_8C3A_057 NA | |
| IL_6HHQ_284 | 1/AR/1234:1238, 1/AR/1250:1254 | No text annotation | homologous IL_8C3A_058 NA | |
| IL_6HHQ_285 | 1/AR/1262:1266, 1/AR/1275:1277 | Major groove platform with extra cWW | homologous IL_8C3A_059 NA | |
| IL_6HHQ_286 | 1/AR/1376:1378, 1/AR/1428:1431 | Isolated cWS basepair | homologous IL_5TBW_057 NA | |
| IL_6HHQ_287 | 1/AR/1385:1387, 1/AR/1420:1421 | Single bulged A | homologous IL_5TBW_058 NA | |
| IL_6HHQ_288 | 1/AR/1388:1395, 1/AR/1415:1419 | Kink-turn | homologous IL_5TBW_059 NA | |
| IL_6HHQ_289 | 1/AR/1398:1400, 1/AR/1411:1412 | Single bulged A | homologous IL_5TBW_060 NA | |
| IL_6HHQ_290 | 1/AR/1444:1450, 1/AR/2354:2359 | 7x6 Sarcin-Ricin; G-bulge | homologous IL_5TBW_061 NA | |
| IL_6HHQ_291 | 1/AR/1500:1505, 1/AR/1513:1516 | No text annotation | homologous IL_5TBW_062 NA | |
| IL_6HHQ_292 | 1/AR/1532:1536, 1/AR/1585:1590 | UAA/GAN | homologous IL_5TBW_063 NA | |
| IL_6HHQ_294 | 1/AR/1618:1621, 1/AR/1824:1826 | Other IL | homologous IL_5TBW_064 NA | |
| IL_6HHQ_490 | 1/AR/1623:1624, 1/AR/1819:1822 | Major groove platform related | homologous IL_8P9A_293 IL_48076.6 | |
| IL_6HHQ_296 | 1/AR/1627:1631, 1/AR/1811:1816 | No text annotation | geometric IL_5TBW_066 NA | |
| IL_6HHQ_297 | 1/AR/1645:1649, 1/AR/1806:1810 | Triple sheared | geometric IL_5TBW_067 NA | |
| IL_6HHQ_298 | 1/AR/1661:1663, 1/AR/1786:1788 | Isolated non-canonical cWW pair | homologous IL_5TBW_068 NA | |
| IL_6HHQ_299 | 1/AR/1669:1670, 1/AR/1778:1780 | Single bulged C | geometric IL_5TBW_069 NA | |
| IL_6HHQ_300 | 1/AR/1670:1671, 1/AR/1776:1778 | Single stack bend | homologous IL_5TBW_070 NA | |
| IL_6HHQ_301 | 1/AR/1694:1698, 1/AR/1747:1752 | No text annotation | homologous IL_5TBW_071 NA | |
| IL_6HHQ_302 | 1/AR/1702:1707, 1/AR/1737:1743 | No text annotation | homologous IL_5TBW_072 NA | |
| IL_6HHQ_303 | 1/AR/1711:1717, 1/AR/1727:1733 | Kink-turn | homologous IL_5TBW_073 NA | |
| IL_6HHQ_304 | 1/AR/1883:1889, 1/AR/2346:2349 | No text annotation | homologous IL_5TBW_074 NA | |
| IL_6HHQ_305 | 1/AR/1895:1897, 1/AR/2338:2340 | No text annotation | homologous IL_8C3A_081 NA | |
| IL_6HHQ_306 | 1/AR/1898:1901, 1/AR/2336:2337 | Major groove platform; stack outside cWW | geometric IL_5TBW_076 NA | |
| IL_6HHQ_491 | 1/AR/1898:1906, 1/AR/2333:2337 | No text annotation | homologous IL_8P9A_305 IL_22854.4 | |
| IL_6HHQ_307 | 1/AR/1901:1906, 1/AR/2333:2336 | Intercalated tWH | homologous IL_5TBW_077 NA | |
| IL_6HHQ_308 | 1/AR/1918:1923, 1/AR/1928:1934 | tSH-tSH-tHH-tHS | homologous IL_5TBW_078 NA | |
| IL_6HHQ_309 | 1/AR/1940:1942, 1/AR/2106:2108 | Isolated non-canonical cWW pair | homologous IL_5TBW_079 NA | |
| IL_6HHQ_310 | 1/AR/1947:1948, 1/AR/2098:2101 | No text annotation | homologous IL_8C3A_086 NA | |
| IL_6HHQ_311 | 1/AR/2128:2129, 1/AR/2323:2325 | Single bulged A | homologous IL_8C3A_087 NA | |
| IL_6HHQ_312 | 1/AR/2156:2161, 1/AR/2173:2180 | Kink-turn related | homologous IL_5TBW_083 NA | |
| IL_6HHQ_313 | 1/AR/2196:2199, 1/AR/2245:2246 | Major groove intercalation | homologous IL_5TBW_084 NA | |
| IL_6HHQ_314 | 1/AR/2200:2201, 1/AR/2241:2244 | Major groove intercalation | homologous IL_5TBW_085 NA | |
| IL_6HHQ_315 | 1/AR/2204:2206, 1/AR/2237:2238 | Single bulged U | homologous IL_5TBW_086 NA | |
| IL_6HHQ_316 | 1/AR/2206:2210, 1/AR/2235:2237 | Major groove platform with extra pair | geometric IL_5TBW_087 NA | |
| IL_6HHQ_317 | 1/AR/2211:2217, 1/AR/2228:2234 | No text annotation | homologous IL_5TBW_088 NA | |
| IL_6HHQ_318 | 1/AR/2276:2277, 1/AR/2307:2310 | Bulged stacked bases | geometric IL_5TBW_089 NA | |
| IL_6HHQ_319 | 1/AR/2277:2288, 1/AR/2304:2307 | No text annotation | homologous IL_5TBW_090 NA | |
| IL_6HHQ_320 | 1/AR/2391:2394, 1/AR/2986:2988 | Major groove platform with extra pair | homologous IL_5TBW_091 NA | |
| IL_6HHQ_321 | 1/AR/2396:2398, 1/AR/2981:2984 | Major groove platform with intercalation | homologous IL_5TBW_092 NA | |
| IL_6HHQ_322 | 1/AR/2409:2411, 1/AR/2811:2812 | Single bulged U | homologous IL_5TBW_093 NA | |
| IL_6HHQ_323 | 1/AR/2412:2413, 1/AR/2807:2810 | Minor groove platform | homologous IL_5TBW_094 NA | |
| IL_6HHQ_324 | 1/AR/2423:2425, 1/AR/2604:2607 | Isolated tHS basepair with bulges | homologous IL_5TBW_095 NA | |
| IL_6HHQ_325 | 1/AR/2520:2526, 1/AR/2584:2587 | No text annotation | homologous IL_5TBW_096 NA | |
| IL_6HHQ_326 | 1/AR/2529:2563, 1/AR/2578:2581 | No text annotation | geometric IL_5TBW_097 NA | |
| IL_6HHQ_327 | 1/AR/2614:2615, 1/AR/2625:2627 | Single bulged A | homologous IL_8C3A_107 NA | |
| IL_6HHQ_328 | 1/AR/2666:2668, 1/AR/2686:2690 | Isolated tHS basepair with bulges | homologous IL_5TBW_099 NA | |
| IL_6HHQ_329 | 1/AR/2718:2721, 1/AR/2735:2738 | Tandem non-canonical cWW pairs | homologous IL_5TBW_100 NA | |
| IL_6HHQ_330 | 1/AR/2770:2773, 1/AR/2787:2788 | Single stack bend with bulge | homologous IL_5TBW_101 NA | |
| IL_6HHQ_331 | 1/AR/2823:2824, 1/AR/2865:2867 | Major groove platform | geometric IL_5TBW_102 NA | |
| IL_6HHQ_332 | 1/AR/2824:2826, 1/AR/2863:2865 | Isolated non-canonical cWW pair | homologous IL_5TBW_103 NA | |
| IL_6HHQ_333 | 1/AR/2826:2828, 1/AR/2862:2863 | Major groove platform | geometric IL_5TBW_104 NA | |
| IL_6HHQ_334 | 1/AR/2828:2830, 1/AR/2858:2862 | Major groove minor groove platform with extra cWW | homologous IL_5TBW_105 NA | |
| IL_6HHQ_335 | 1/AR/2835:2839, 1/AR/2849:2853 | Triple sheared | homologous IL_5TBW_106 NA | |
| IL_6HHQ_336 | 1/AR/2876:2877, 1/AR/2949:2951 | Major groove platform | homologous IL_5TBW_107 NA | |
| IL_6HHQ_337 | 1/AR/2879:2881, 1/AR/2943:2947 | Isolated non-canonical cWW with bulges | geometric IL_5TBW_108 NA | |
| IL_6HHQ_338 | 1/AR/2881:2882, 1/AR/2940:2943 | Multiple bulged bases | homologous IL_5TBW_109 NA | |
| IL_6HHQ_339 | 1/AR/2889:2891, 1/AR/2912:2914 | Isolated non-canonical cWW pair | homologous IL_5TBW_110 NA | |
| IL_6HHQ_492 | 1/AR/2889:2892, 1/AR/2909:2914 | No text annotation | homologous IL_8P9A_338 IL_07469.2 | |
| IL_6HHQ_340 | 1/AR/2891:2892, 1/AR/2909:2912 | Major groove platform with intercalation | geometric IL_5TBW_111 NA | |
| IL_6HHQ_341 | 1/AR/2918:2920, 1/AR/2926:2928 | Isolated non-canonical cWW pair | homologous IL_5TBW_112 NA | |
| IL_6HHQ_342 | 1/AR/2960:2961, 1/AR/2970:2972 | Single bulged A | homologous IL_5TBW_113 NA | |
| IL_6HHQ_343 | 1/AR/3004:3007, 1/AR/3139:3144 | Double sheared | homologous IL_5TBW_114 NA | |
| IL_6HHQ_344 | 1/AR/3012:3014, 1/AR/3040:3042 | Isolated non-canonical cWW pair | homologous IL_8C3A_124 NA | |
| IL_6HHQ_345 | 1/AR/3018:3025, 1/AR/3030:3036 | 8x7 Sarcin-Ricin; G-bulge | homologous IL_5TBW_116 NA | |
| IL_6HHQ_346 | 1/AR/3047:3051, 1/AR/3091:3094 | Major groove minor groove platform with tHH | homologous IL_5TBW_117 NA | |
| IL_6HHQ_347 | 1/AR/3054:3059, 1/AR/3084:3088 | UAA/GAN related | homologous IL_5TBW_118 NA | |
| IL_6HHQ_348 | 1/AR/3063:3064, 1/AR/3077:3080 | Multiple bulged bases | homologous IL_5TBW_119 NA | |
| IL_6HHQ_349 | 1/AR/3103:3107, 1/AR/3127:3131 | UAA/GAN | homologous IL_5TBW_120 NA | |
| IL_6HHQ_350 | 1/AR/3162:3166, 1/AR/3284:3288 | No text annotation | homologous IL_5TBW_121 NA | |
| IL_6HHQ_351 | 1/AR/3168:3170, 1/AR/3280:3282 | Isolated non-canonical cWW pair | homologous IL_5TBW_122 NA | |
| IL_6HHQ_352 | 1/AR/3177:3179, 1/AR/3210:3211 | Single bulged A | homologous IL_5TBW_123 NA | |
| IL_6HHQ_353 | 1/AR/3179:3188, 1/AR/3204:3210 | No text annotation | geometric IL_5TBW_124 NA | |
| IL_6HHQ_354 | 1/AR/3193:3194, 1/AR/3197:3199 | Single bulged U | homologous IL_5TBW_125 NA | |
| IL_6HHQ_355 | 1/AR/3225:3229, 1/AR/3258:3260 | No text annotation | homologous IL_5TBW_126 NA | |
| IL_6HHQ_356 | 1/AR/3233:3235, 1/AR/3252:3254 | Isolated non-canonical cWW pair | homologous IL_5TBW_127 NA | |
| IL_6HHQ_357 | 1/AR/3235:3238, 1/AR/3249:3252 | Tandem non-canonical cWW pairs | geometric IL_6MWN_005 IL_77658.1 | |
| IL_6HHQ_358 | 1/AR/3300:3303, 1/AR/3311:3314 | Tandem non-canonical cWW pairs | homologous IL_5TBW_129 NA | |
| IL_6HHQ_359 | 1/AR/3318:3320, 1/AR/3387:3388 | Single bulged U | homologous IL_5TBW_130 NA | |
| IL_6HHQ_360 | 1/AR/3324:3325, 1/AR/3381:3383 | Single bulged U | homologous IL_5TBW_131 NA | |
| IL_6HHQ_361 | 1/AR/3328:3330, 1/AR/3373:3378 | Isolated non-canonical cWW pair | homologous IL_5TBW_132 NA | |
| IL_6HHQ_362 | 1/AR/3332:3337, 1/AR/3367:3371 | No text annotation | homologous IL_5TBW_133 NA | |
| IL_6HHQ_363 | 1/AR/3340:3342, 1/AR/3363:3364 | Single bulged U | homologous IL_8C3A_140 NA | |
| IL_6HHQ_364 | 1/AR/3342:3345, 1/AR/3360:3363 | Double sheared; A in syn | geometric IL_5TBW_135 NA | |
| IL_6HHQ_365 | 1/AR/3349:3350, 1/AR/3353:3356 | Multiple bulged bases | homologous IL_8C3A_142 NA | |
| IL_6HHQ_366 | 1/AS/15:16, 1/AS/63:65 | Single bulged A | geometric IL_5TBW_372 NA | |
| IL_6HHQ_367 | 1/AS/21:27, 1/AS/53:58 | Minor groove platform related | geometric IL_5TBW_373 NA | |
| IL_6HHQ_368 | 1/AS/28:29, 1/AS/49:52 | Minor groove platform | geometric IL_5TBW_374 NA | |
| IL_6HHQ_369 | 1/AS/29:30, 1/AS/47:49 | Single stack bend | geometric IL_5TBW_375 NA | |
| IL_6HHQ_370 | 1/AS/32:36, 1/AS/41:45 | Symmetric double minor groove platform | geometric IL_5TBW_376 NA | |
| IL_6HHQ_371 | 1/AS/72:80, 1/AS/100:106 | 8x7 Sarcin-Ricin; G-bulge | geometric IL_5TBW_377 NA | |
| IL_6HHQ_372 | 1/AS/84:87, 1/AS/94:96 | Isolated non-canonical cWW pair | geometric IL_5TBW_378 NA | |
| IL_6HHQ_373 | 1/AT/44:64, 1/AT/96:100 | No text annotation | geometric IL_5TBW_144 NA | |
| IL_6HHQ_374 | 1/AT/64:66, 1/AT/93:96 | Isolated non-canonical cWW pair | geometric IL_5TBW_145 NA | |
| IL_6HHQ_375 | 1/AT/68:69, 1/AT/89:91 | Single bulged U | geometric IL_5TBW_146 NA | |
| IL_6HHQ_376 | 1/sR/24:26, 1/sR/600:601 | Single bulged C | homologous IL_4V88_384 NA | |
| IL_6HHQ_377 | 1/sR/35:37, 1/sR/471:473 | Isolated non-canonical cWW pair | geometric IL_4V88_385 NA | |
| IL_6HHQ_378 | 1/sR/37:41, 1/sR/466:471 | Triple sheared related | homologous IL_4V88_386 NA | |
| IL_6HHQ_379 | 1/sR/42:48, 1/sR/431:433 | No text annotation | homologous IL_4V88_387 NA | |
| IL_6HHQ_380 | 1/sR/50:52, 1/sR/428:429 | Minor groove platform | homologous IL_4V88_388 NA | |
| IL_6HHQ_381 | 1/sR/58:63, 1/sR/87:89 | No text annotation | homologous IL_4V88_389 NA | |
| IL_6HHQ_382 | 1/sR/64:69, 1/sR/82:86 | No text annotation | homologous IL_4V88_390 NA | |
| IL_6HHQ_383 | 1/sR/109:112, 1/sR/302:305 | Tandem non-canonical cWW pairs | homologous IL_4V88_391 NA | |
| IL_6HHQ_384 | 1/sR/113:116, 1/sR/300:301 | Multiple bulged bases | homologous IL_4V88_392 NA | |
| IL_6HHQ_385 | 1/sR/117:122, 1/sR/295:299 | No text annotation | homologous IL_4V88_393 NA | |
| IL_6HHQ_386 | 1/sR/143:149, 1/sR/165:172 | tWH-tWH-tHW-tHW | homologous IL_4V88_394 NA | |
| IL_6HHQ_387 | 1/sR/150:152, 1/sR/162:164 | Isolated non-canonical cWW contact | homologous IL_4V88_395 NA | |
| IL_6HHQ_388 | 1/sR/186:189, 1/sR/196:199 | Double sheared | homologous IL_4V88_396 NA | |
| IL_6HHQ_389 | 1/sR/204:206, 1/sR/259:263 | Major groove platform with extra cWW | homologous IL_4V88_397 NA | |
| IL_6HHQ_390 | 1/sR/206:208, 1/sR/257:259 | Isolated non-canonical cWW pair | geometric IL_4V88_398 NA | |
| IL_6HHQ_391 | 1/sR/213:243, 1/sR/250:252 | No text annotation | ||
| IL_6HHQ_392 | 1/sR/265:267, 1/sR/288:289 | Single bulged A | homologous IL_4V88_399 NA | |
| IL_6HHQ_393 | 1/sR/270:273, 1/sR/283:285 | No text annotation | homologous IL_4V88_400 NA | |
| IL_6HHQ_394 | 1/sR/275:276, 1/sR/279:281 | Single bulged U | homologous IL_4V88_401 NA | |
| IL_6HHQ_395 | 1/sR/311:316, 1/sR/348:355 | Kink-turn with non-sequential stacking | homologous IL_4V88_402 NA | |
| IL_6HHQ_396 | 1/sR/318:323, 1/sR/345:346 | No text annotation | homologous IL_4V88_403 NA | |
| IL_6HHQ_397 | 1/sR/363:365, 1/sR/376:381 | No text annotation | homologous IL_4V88_404 NA | |
| IL_6HHQ_398 | 1/sR/389:391, 1/sR/406:408 | Isolated cWH basepair | homologous IL_4V88_405 NA | |
| IL_6HHQ_399 | 1/sR/411:413, 1/sR/420:422 | Isolated near basepair | homologous IL_4V88_406 NA | |
| IL_6HHQ_400 | 1/sR/439:441, 1/sR/463:464 | Single bulged U | homologous IL_4V88_407 NA | |
| IL_6HHQ_509 | 1/sR/443:447, 1/sR/460:461 | No text annotation | homologous IL_8P9A_397 IL_03109.3 | |
| IL_6HHQ_510 | 1/sR/447:448, 1/sR/458:460 | Single bulged G | homologous IL_8P9A_398 IL_00225.13 | |
| IL_6HHQ_493 | 1/sR/481:482, 1/sR/505:507 | Single bulged A | homologous IL_8P9A_399 IL_31462.5 | |
| IL_6HHQ_511 | 1/sR/516:518, 1/sR/533:536 | No text annotation | homologous IL_8P9A_400 IL_90351.1 | |
| IL_6HHQ_512 | 1/sR/518:520, 1/sR/532:533 | Minor groove platform | homologous IL_8P9A_401 IL_51454.2 | |
| IL_6HHQ_404 | 1/sR/550:557, 1/sR/587:588 | SSU/LSU pseudoknot | homologous IL_4V88_413 NA | |
| IL_6HHQ_405 | 1/sR/557:559, 1/sR/586:587 | Single bulged U | geometric IL_4V88_414 NA | |
| IL_6HHQ_406 | 1/sR/562:568, 1/sR/575:583 | Kink-turn related | homologous IL_4V88_415 NA | |
| IL_6HHQ_407 | 1/sR/616:622, 1/sR/1104:1105 | No text annotation | homologous IL_4V88_416 NA | |
| IL_6HHQ_408 | 1/sR/624:626, 1/sR/973:975 | Isolated non-canonical cWW pair | homologous IL_4V88_417 NA | |
| IL_6HHQ_409 | 1/sR/627:631, 1/sR/968:972 | tSH-tHW-tHS | homologous IL_4V88_418 NA | |
| IL_6HHQ_410 | 1/sR/646:648, 1/sR/686:688 | Isolated non-canonical cWW pair | homologous IL_4V88_419 NA | |
| IL_6HHQ_411 | 1/sR/649:653, 1/sR/677:685 | No text annotation | homologous IL_4V88_420 NA | |
| IL_6HHQ_494 | 1/sR/703:708, 1/sR/730:735 | No text annotation | homologous IL_8P9A_410 IL_85536.2 | |
| IL_6HHQ_413 | 1/sR/709:712, 1/sR/726:729 | Tandem non-canonical cWW pairs | geometric IL_4EYA_003 IL_77658.1 | |
| IL_6HHQ_414 | 1/sR/746:747, 1/sR/802:805 | Major groove minor groove platform; mini C-loop | homologous IL_4V88_423 NA | |
| IL_6HHQ_415 | 1/sR/748:750, 1/sR/799:801 | Isolated non-canonical cWW pair | homologous IL_4V88_424 NA | |
| IL_6HHQ_416 | 1/sR/751:759, 1/sR/791:798 | No text annotation | homologous IL_4V88_425 NA | |
| IL_6HHQ_417 | 1/sR/819:822, 1/sR/850:852 | Isolated non-canonical cWW pair | homologous IL_4V88_426 NA | |
| IL_6HHQ_419 | 1/sR/865:866, 1/sR/962:965 | Major groove platform; stack outside cWW | geometric IL_4V88_428 NA | |
| IL_6HHQ_495 | 1/sR/868:870, 1/sR/957:960 | Isolated non-canonical cWW pair | homologous IL_8P9A_418 IL_57744.1 | |
| IL_6HHQ_496 | 1/sR/871:874, 1/sR/953:956 | No text annotation | homologous IL_8P9A_419 IL_85033.2 | |
| IL_6HHQ_422 | 1/sR/874:878, 1/sR/950:953 | Tandem non-canonical cWW pairs | homologous IL_4V88_431 NA | |
| IL_6HHQ_423 | 1/sR/885:888, 1/sR/924:927 | Tandem non-canonical cWW pairs | homologous IL_4V88_432 NA | |
| IL_6HHQ_424 | 1/sR/893:899, 1/sR/910:919 | Kink-turn related | homologous IL_8C3A_440 NA | |
| IL_6HHQ_425 | 1/sR/985:990, 1/sR/1014:1016 | Other IL | geometric IL_4V88_435 NA | |
| IL_6HHQ_426 | 1/sR/990:994, 1/sR/1010:1014 | tSH-tHW-tHS | homologous IL_4V88_436 NA | |
| IL_6HHQ_427 | 1/sR/1034:1036, 1/sR/1095:1101 | No text annotation | homologous IL_4V88_437 NA | |
| IL_6HHQ_428 | 1/sR/1041:1044, 1/sR/1074:1077 | Tandem non-canonical cWW pairs | homologous IL_4V88_438 NA | |
| IL_6HHQ_429 | 1/sR/1051:1053, 1/sR/1066:1067 | Single bulged U | homologous IL_4V88_439 NA | |
| IL_6HHQ_430 | 1/sR/1111:1118, 1/sR/1129:1134 | 8x6 Sarcin-Ricin with inserted Y; G-bulge | homologous IL_4V88_440 NA | |
| IL_6HHQ_431 | 1/sR/1146:1147, 1/sR/1630:1632 | Single bulged A | homologous IL_4V88_441 NA | |
| IL_6HHQ_432 | 1/sR/1149:1151, 1/sR/1627:1628 | Single bulged G | homologous IL_4V88_442 NA | |
| IL_6HHQ_433 | 1/sR/1157:1160, 1/sR/1617:1621 | C-loop | homologous IL_4V88_443 NA | |
| IL_6HHQ_434 | 1/sR/1173:1175, 1/sR/1464:1466 | Isolated non-canonical cWW pair | homologous IL_4V88_444 NA | |
| IL_6HHQ_435 | 1/sR/1178:1179, 1/sR/1459:1461 | Minor groove platform | homologous IL_4V88_445 NA | |
| IL_6HHQ_436 | 1/sR/1213:1215, 1/sR/1448:1450 | Isolated non-canonical cWW pair | geometric IL_4V88_446 NA | |
| IL_6HHQ_513 | 1/sR/1224:1233, 1/sR/1252:1259 | No text annotation | homologous IL_8P9A_470 IL_28304.1 | |
| IL_6HHQ_437 | 1/sR/1234:1236, 1/sR/1249:1251 | No text annotation | homologous IL_4V88_448 NA | |
| IL_6HHQ_438 | 1/sR/1268:1270, 1/sR/1440:1441 | Single bulged U | homologous IL_4V88_449 NA | |
| IL_6HHQ_439 | 1/sR/1272:1276, 1/sR/1436:1438 | Isolated cWS basepair | geometric IL_4V88_450 NA | |
| IL_6HHQ_498 | 1/sR/1272:1278, 1/sR/1430:1438 | No text annotation | homologous IL_8P9A_439 IL_86012.1 | |
| IL_6HHQ_440 | 1/sR/1276:1278, 1/sR/1430:1436 | Minor groove platform with extra cWW | homologous IL_4V88_451 NA | |
| IL_6HHQ_441 | 1/sR/1280:1281, 1/sR/1426:1428 | Single bulged A | homologous IL_4V88_452 NA | |
| IL_6HHQ_442 | 1/sR/1290:1292, 1/sR/1323:1325 | Isolated cWH basepair | homologous IL_4V88_453 NA | |
| IL_6HHQ_443 | 1/sR/1306:1308, 1/sR/1317:1318 | Minor groove platform | geometric IL_4V88_454 NA | |
| IL_6HHQ_444 | 1/sR/1339:1342, 1/sR/1383:1385 | Isolated non-canonical cWW pair | homologous IL_4V88_455 NA | |
| IL_6HHQ_445 | 1/sR/1345:1348, 1/sR/1377:1380 | Minor groove platform | homologous IL_4V88_456 NA | |
| IL_6HHQ_446 | 1/sR/1352:1354, 1/sR/1369:1373 | Isolated non-canonical cWW pair | homologous IL_4V88_457 NA | |
| IL_6HHQ_447 | 1/sR/1389:1391, 1/sR/1407:1412 | Major groove platform; stack outside cWW | geometric IL_4V88_458 NA | |
| IL_6HHQ_448 | 1/sR/1480:1487, 1/sR/1519:1527 | No text annotation | homologous IL_4V88_459 NA | |
| IL_6HHQ_449 | 1/sR/1488:1494, 1/sR/1513:1518 | 180 degree turn | homologous IL_4V88_460 NA | |
| IL_6HHQ_450 | 1/sR/1495:1498, 1/sR/1509:1512 | Tandem non-canonical cWW pairs | homologous IL_4V88_461 NA | |
| IL_6HHQ_451 | 1/sR/1540:1545, 1/sR/1566:1571 | No text annotation | geometric IL_4V88_462 NA | |
| IL_6HHQ_452 | 1/sR/1636:1638, 1/sR/1764:1767 | No text annotation | geometric IL_4V88_463 NA | |
| IL_6HHQ_453 | 1/sR/1638:1641, 1/sR/1760:1764 | No text annotation | homologous IL_4V88_464 NA | |
| IL_6HHQ_454 | 1/sR/1642:1644, 1/sR/1757:1759 | Isolated non-canonical cWW pair | geometric IL_4V88_465 NA | |
| IL_6HHQ_455 | 1/sR/1644:1647, 1/sR/1753:1757 | Non canonical cWW and near pair | homologous IL_4V88_466 NA | |
| IL_6HHQ_456 | 1/sR/1650:1652, 1/sR/1748:1750 | Isolated non-canonical cWW pair | homologous IL_4V88_467 NA | |
| IL_6HHQ_457 | 1/sR/1653:1656, 1/sR/1744:1747 | Double sheared | homologous IL_4V88_468 NA | |
| IL_6HHQ_458 | 1/sR/1656:1658, 1/sR/1743:1744 | Single bulged U | geometric IL_4V88_469 NA | |
| IL_6HHQ_459 | 1/sR/1665:1667, 1/sR/1734:1736 | Isolated non-canonical cWW pair | homologous IL_4V88_470 NA | |
| IL_6HHQ_460 | 1/sR/1669:1672, 1/sR/1729:1732 | Double sheared | homologous IL_4V88_471 NA | |
| IL_6HHQ_461 | 1/sR/1672:1674, 1/sR/1727:1729 | Isolated non-canonical cWW pair | geometric IL_4V88_472 NA | |
| IL_6HHQ_462 | 1/sR/1675:1678, 1/sR/1723:1726 | Tandem non-canonical cWW pairs | homologous IL_4V88_473 NA | |
| IL_6HHQ_463 | 1/sR/1678:1682, 1/sR/1719:1723 | Triple sheared | geometric IL_4V88_474 NA |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_6HHQ_001 | No text annotation | ||
| IL_6HHQ_465 | No text annotation | ||
| IL_6HHQ_011 | Major groove platform with extra pair | ||
| IL_6HHQ_017 | Kink-turn related | ||
| IL_6HHQ_043 | Other IL | ||
| IL_6HHQ_467 | Tandem non-canonical cWW pairs | ||
| IL_6HHQ_047 | Isolated cWS basepair | ||
| IL_6HHQ_061 | No text annotation | ||
| IL_6HHQ_470 | No text annotation | ||
| IL_6HHQ_169 | C-loop with extra cWW pair | ||
| IL_6HHQ_170 | Minor groove platform with extra cWW | ||
| IL_6HHQ_179 | No text annotation | ||
| IL_6HHQ_180 | Major groove minor groove platform with extra cWW | ||
| IL_6HHQ_182 | No text annotation | ||
| IL_6HHQ_185 | Tandem non-canonical cWW pairs | ||
| IL_6HHQ_199 | C-loop with extra cWW pair | ||
| IL_6HHQ_481 | Tandem non-canonical cWW pairs | ||
| IL_6HHQ_482 | Tandem non-canonical cWW pairs | ||
| IL_6HHQ_203 | No text annotation | ||
| IL_6HHQ_483 | No text annotation | ||
| IL_6HHQ_213 | No text annotation | ||
| IL_6HHQ_214 | No text annotation | ||
| IL_6HHQ_486 | No text annotation | ||
| IL_6HHQ_231 | No text annotation | ||
| IL_6HHQ_241 | Major groove platform with extra pair | ||
| IL_6HHQ_247 | No text annotation | ||
| IL_6HHQ_487 | Kink-turn related | ||
| IL_6HHQ_273 | Other IL | ||
| IL_6HHQ_489 | No text annotation | ||
| IL_6HHQ_293 | No text annotation | ||
| IL_6HHQ_295 | No text annotation | ||
| IL_6HHQ_401 | C-loop with extra cWW pair | ||
| IL_6HHQ_402 | Other IL | ||
| IL_6HHQ_403 | Triple sheared | ||
| IL_6HHQ_412 | No text annotation | ||
| IL_6HHQ_418 | Isolated cWH basepair | ||
| IL_6HHQ_420 | Tandem non-canonical cWW pairs | ||
| IL_6HHQ_421 | No text annotation | ||
| IL_6HHQ_497 | No text annotation | ||
| IL_6HHQ_499 | No text annotation | ||
| IL_6HHQ_464 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J3_6HHQ_001 | 1/1/113:123, 1/1/149:158, 1/1/263:267 | No text annotation | homologous J3_8P9A_042 J3_19664.1 | |
| J3_6HHQ_060 | 1/1/113:124, 1/1/144:158, 1/1/263:267 | No text annotation | ||
| J3_6HHQ_061 | 1/1/185:189, 1/1/205:214, 1/1/226:231 | No text annotation | homologous J3_8P9A_044 J3_75408.1 | |
| J3_6HHQ_062 | 1/1/340:356, 1/1/363:368, 1/4/21:24 | No text annotation | homologous J3_8P9A_045 J3_30040.2 | |
| J3_6HHQ_002 | 1/1/369:376, 1/1/403:404, 1/4/19:20 | No text annotation | homologous J3_5TBW_002 NA | |
| J3_6HHQ_063 | 1/1/369:379, 1/1/390:404, 1/4/19:20 | No text annotation | homologous J3_8P9A_047 J3_92134.2 | |
| J3_6HHQ_003 | 1/1/502:503, 1/1/588:597, 1/1/606:611 | No text annotation | homologous J3_5TBW_003 NA | |
| J3_6HHQ_004 | 1/1/814:820, 1/1/905:907, 1/1/923:926 | No text annotation | homologous J3_5TBW_004 NA | |
| J3_6HHQ_005 | 1/1/828:831, 1/1/863:867, 1/1/892:897 | No text annotation | homologous J3_5TBW_005 NA | |
| J3_6HHQ_006 | 1/1/986:987, 1/1/1062:1066, 1/1/1092:1098 | No text annotation | homologous J3_5TBW_006 NA | |
| J3_6HHQ_007 | 1/1/1229:1234, 1/1/1254:1266, 1/1/1275:1280 | No text annotation | ||
| J3_6HHQ_008 | 1/1/1479:1485, 1/1/1857:1859, 1/1/1871:1874 | No text annotation | homologous J3_5TBW_008 NA | |
| J3_6HHQ_009 | 1/1/1488:1491, 1/1/1837:1843, 1/1/1852:1854 | No text annotation | homologous J3_5TBW_009 NA | |
| J3_6HHQ_010 | 1/1/1526:1531, 1/1/1591:1595, 1/1/1612:1613 | No text annotation | homologous J3_5TBW_010 NA | |
| J3_6HHQ_011 | 1/1/1631:1632, 1/1/1641:1645, 1/1/1810:1811 | No text annotation | homologous J3_8C3A_054 NA | |
| J3_6HHQ_064 | 1/1/1654:1658, 1/1/1791:1792, 1/1/1796:1801 | No text annotation | homologous J3_8P9A_058 J3_12393.2 | |
| J3_6HHQ_012 | 1/1/2432:2435, 1/1/2512:2517, 1/1/2590:2597 | No text annotation | homologous J3_5TBW_012 NA | |
| J3_6HHQ_065 | 1/1/2651:2653, 1/1/2754:2765, 1/1/2793:2798 | No text annotation | homologous J3_8P9A_061 J3_20992.1 | |
| J3_6HHQ_013 | 1/1/2664:2666, 1/1/2690:2692, 1/1/2701:2706 | No text annotation | homologous J3_5TBW_013 NA | |
| J3_6HHQ_014 | 1/1/2886:2889, 1/1/2914:2916, 1/1/2930:2936 | No text annotation | homologous J3_5TBW_014 NA | |
| J3_6HHQ_066 | 1/1/3171:3176, 1/1/3212:3220, 1/1/3265:3279 | No text annotation | homologous J3_8P9A_064 J3_03190.1 | |
| J3_6HHQ_015 | 1/1/3298:3300, 1/1/3314:3320, 1/1/3387:3390 | No text annotation | geometric J3_5TBW_069 NA | |
| J3_6HHQ_016 | 1/3/9:14, 1/3/66:67, 1/3/111:112 | No text annotation | homologous J3_5TBW_045 NA | |
| J3_6HHQ_017 | 1/4/44:45, 1/4/58:64, 1/4/96:100 | No text annotation | homologous J3_8P4V_024 NA | |
| J3_6HHQ_018 | 1/A/41:42, 1/A/433:439, 1/A/464:466 | No text annotation | geometric J3_4V88_078 NA | |
| J3_6HHQ_067 | 1/A/41:48, 1/A/431:439, 1/A/464:466 | No text annotation | homologous J3_8P9A_069 J3_46317.4 | |
| J3_6HHQ_068 | 1/A/213:228, 1/A/237:243, 1/A/250:252 | No text annotation | ||
| J3_6HHQ_019 | 1/A/633:635, 1/A/861:865, 1/A/965:966 | No text annotation | geometric J3_4V88_080 NA | |
| J3_6HHQ_069 | 1/A/633:635, 1/A/861:866, 1/A/962:966 | No text annotation | homologous J3_8P9A_072 J3_17385.4 | |
| J3_6HHQ_020 | 1/A/760:763, 1/A/773:775, 1/A/785:790 | No text annotation | homologous J3_8C3A_035 NA | |
| J3_6HHQ_021 | 1/A/881:884, 1/A/928:936, 1/A/943:947 | No text annotation | homologous J3_8P9A_074 J3_76375.1 | |
| J3_6HHQ_022 | 1/A/1037:1039, 1/A/1079:1083, 1/A/1090:1094 | No text annotation | homologous J3_8C3A_037 NA | |
| J3_6HHQ_023 | 1/A/1161:1164, 1/A/1581:1587, 1/A/1609:1616 | No text annotation | homologous J3_8C3A_038 NA | |
| J3_6HHQ_024 | 1/A/1168:1171, 1/A/1468:1470, 1/A/1574:1577 | No text annotation | homologous J3_8C3A_039 NA | |
| J3_6HHQ_025 | 1/A/1180:1187, 1/A/1198:1209, 1/A/1454:1458 | No text annotation | homologous J3_8C3A_040 NA | |
| J3_6HHQ_026 | 1/A/1215:1220, 1/A/1263:1267, 1/A/1442:1448 | No text annotation | homologous J3_8C3A_041 NA | |
| J3_6HHQ_027 | 1/A/1283:1288, 1/A/1327:1332, 1/A/1419:1424 | No text annotation | homologous J3_8P9A_080 J3_99563.1 | |
| J3_6HHQ_028 | 1/A/1293:1294, 1/A/1303:1306, 1/A/1318:1322 | No text annotation | homologous J3_8C3A_085 NA | |
| J3_6HHQ_029 | 1/A/1336:1338, 1/A/1386:1389, 1/A/1412:1415 | No text annotation | homologous J3_8C3A_043 NA | |
| J3_6HHQ_070 | 1/A/1336:1338, 1/A/1386:1391, 1/A/1407:1415 | No text annotation | homologous J3_8P9A_083 J3_88233.1 | |
| J3_6HHQ_030 | 1/A/1470:1474, 1/A/1533:1540, 1/A/1571:1574 | No text annotation | homologous J3_8C3A_044 NA | |
| J3_6HHQ_031 | 1/AR/113:123, 1/AR/149:158, 1/AR/263:267 | No text annotation | homologous J3_8P9A_042 J3_19664.1 | |
| J3_6HHQ_071 | 1/AR/113:124, 1/AR/144:158, 1/AR/263:267 | No text annotation | ||
| J3_6HHQ_072 | 1/AR/185:189, 1/AR/205:214, 1/AR/226:231 | No text annotation | homologous J3_8P9A_044 J3_75408.1 | |
| J3_6HHQ_073 | 1/AR/340:356, 1/AR/363:368, 1/AT/21:24 | No text annotation | homologous J3_8P9A_045 J3_30040.2 | |
| J3_6HHQ_032 | 1/AR/369:376, 1/AR/403:404, 1/AT/19:20 | No text annotation | homologous J3_5TBW_002 NA | |
| J3_6HHQ_074 | 1/AR/369:379, 1/AR/390:404, 1/AT/19:20 | No text annotation | homologous J3_8P9A_047 J3_92134.2 | |
| J3_6HHQ_033 | 1/AR/502:503, 1/AR/588:597, 1/AR/606:611 | No text annotation | homologous J3_5TBW_003 NA | |
| J3_6HHQ_034 | 1/AR/814:820, 1/AR/905:907, 1/AR/923:926 | No text annotation | homologous J3_8C3A_003 NA | |
| J3_6HHQ_035 | 1/AR/828:831, 1/AR/863:867, 1/AR/892:897 | No text annotation | homologous J3_5TBW_005 NA | |
| J3_6HHQ_036 | 1/AR/986:987, 1/AR/1062:1066, 1/AR/1092:1098 | No text annotation | homologous J3_5TBW_006 NA | |
| J3_6HHQ_037 | 1/AR/1230:1232, 1/AR/1256:1262, 1/AR/1277:1279 | No text annotation | homologous J3_8C3A_005 NA | |
| J3_6HHQ_038 | 1/AR/1479:1485, 1/AR/1857:1859, 1/AR/1871:1874 | No text annotation | homologous J3_5TBW_008 NA | |
| J3_6HHQ_039 | 1/AR/1488:1491, 1/AR/1837:1843, 1/AR/1852:1854 | No text annotation | homologous J3_5TBW_009 NA | |
| J3_6HHQ_040 | 1/AR/1526:1531, 1/AR/1591:1595, 1/AR/1612:1613 | No text annotation | homologous J3_5TBW_010 NA | |
| J3_6HHQ_075 | 1/AR/1537:1542, 1/AR/1551:1563, 1/AR/1577:1584 | No text annotation | homologous J3_8P9A_056 J3_38098.1 | |
| J3_6HHQ_084 | 1/AR/1631:1632, 1/AR/1641:1645, 1/AR/1810:1811 | No text annotation | homologous J3_8P9A_087 J3_75962.2 | |
| J3_6HHQ_076 | 1/AR/1654:1658, 1/AR/1791:1792, 1/AR/1796:1801 | No text annotation | homologous J3_8P9A_058 J3_12393.2 | |
| J3_6HHQ_042 | 1/AR/2432:2435, 1/AR/2512:2517, 1/AR/2590:2597 | No text annotation | homologous J3_5TBW_012 NA | |
| J3_6HHQ_077 | 1/AR/2651:2653, 1/AR/2754:2765, 1/AR/2793:2798 | No text annotation | homologous J3_8P9A_061 J3_20992.1 | |
| J3_6HHQ_043 | 1/AR/2664:2666, 1/AR/2690:2692, 1/AR/2701:2706 | No text annotation | homologous J3_8C3A_010 NA | |
| J3_6HHQ_044 | 1/AR/2886:2889, 1/AR/2914:2916, 1/AR/2930:2936 | No text annotation | homologous J3_8C3A_011 NA | |
| J3_6HHQ_078 | 1/AR/3171:3176, 1/AR/3212:3220, 1/AR/3265:3279 | No text annotation | homologous J3_8P9A_064 J3_03190.1 | |
| J3_6HHQ_045 | 1/AR/3298:3300, 1/AR/3314:3318, 1/AR/3388:3390 | No text annotation | homologous J3_5TBW_015 NA | |
| J3_6HHQ_079 | 1/AR/3298:3300, 1/AR/3314:3320, 1/AR/3387:3390 | No text annotation | geometric J3_5TBW_069 NA | |
| J3_6HHQ_046 | 1/AS/9:14, 1/AS/66:67, 1/AS/111:112 | No text annotation | homologous J3_5TBW_045 NA | |
| J3_6HHQ_080 | 1/AT/44:45, 1/AT/58:64, 1/AT/96:100 | No text annotation | homologous J3_8P9A_067 J3_35667.2 | |
| J3_6HHQ_047 | 1/sR/41:42, 1/sR/433:439, 1/sR/464:466 | No text annotation | geometric J3_4V88_078 NA | |
| J3_6HHQ_081 | 1/sR/41:48, 1/sR/431:439, 1/sR/464:466 | No text annotation | homologous J3_8P9A_069 J3_46317.4 | |
| J3_6HHQ_048 | 1/sR/633:635, 1/sR/861:865, 1/sR/965:966 | No text annotation | geometric J3_4V88_080 NA | |
| J3_6HHQ_082 | 1/sR/633:635, 1/sR/861:866, 1/sR/962:966 | No text annotation | homologous J3_8P9A_072 J3_17385.4 | |
| J3_6HHQ_049 | 1/sR/760:763, 1/sR/773:775, 1/sR/785:790 | No text annotation | homologous J3_4V88_032 NA | |
| J3_6HHQ_050 | 1/sR/881:884, 1/sR/928:936, 1/sR/943:947 | No text annotation | homologous J3_4V88_033 NA | |
| J3_6HHQ_051 | 1/sR/1037:1039, 1/sR/1079:1083, 1/sR/1090:1094 | No text annotation | homologous J3_4V88_034 NA | |
| J3_6HHQ_052 | 1/sR/1161:1164, 1/sR/1581:1587, 1/sR/1609:1616 | No text annotation | homologous J3_4V88_035 NA | |
| J3_6HHQ_053 | 1/sR/1168:1171, 1/sR/1468:1470, 1/sR/1574:1577 | No text annotation | homologous J3_4V88_036 NA | |
| J3_6HHQ_054 | 1/sR/1180:1187, 1/sR/1198:1209, 1/sR/1454:1458 | No text annotation | homologous J3_8P9A_078 J3_83516.4 | |
| J3_6HHQ_055 | 1/sR/1215:1220, 1/sR/1263:1267, 1/sR/1442:1448 | No text annotation | homologous J3_4V88_038 NA | |
| J3_6HHQ_056 | 1/sR/1283:1288, 1/sR/1327:1332, 1/sR/1419:1424 | No text annotation | homologous J3_4V88_039 NA | |
| J3_6HHQ_057 | 1/sR/1293:1294, 1/sR/1303:1306, 1/sR/1318:1322 | No text annotation | homologous J3_8P9A_081 J3_76043.3 | |
| J3_6HHQ_058 | 1/sR/1336:1338, 1/sR/1386:1389, 1/sR/1412:1415 | No text annotation | homologous J3_4V88_040 NA | |
| J3_6HHQ_083 | 1/sR/1336:1338, 1/sR/1386:1391, 1/sR/1407:1415 | No text annotation | homologous J3_8P9A_083 J3_88233.1 | |
| J3_6HHQ_059 | 1/sR/1470:1474, 1/sR/1533:1540, 1/sR/1571:1574 | No text annotation | homologous J3_4V88_041 NA | |
| J4_6HHQ_024 | 1/1/112:113, 1/1/267:272, 1/1/293:299, 1/1/316:319 | No text annotation | homologous J4_8P9A_012 J4_45801.6 | |
| J4_6HHQ_002 | 1/1/185:189, 1/1/205:208, 1/1/212:214, 1/1/226:231 | No text annotation | homologous J4_8P9A_013 J4_12410.1 | |
| J4_6HHQ_003 | 1/1/1451:1457, 1/1/1475:1476, 1/1/1877:1880, 1/1/2352:2353 | No text annotation | homologous J4_8P9A_014 J4_87855.1 | |
| J4_6HHQ_004 | 1/1/1492:1496, 1/1/1520:1525, 1/1/1614:1615, 1/1/1829:1836 | No text annotation | homologous J4_8P9A_015 J4_69051.6 | |
| J4_6HHQ_005 | 1/1/1674:1675, 1/1/1693:1694, 1/1/1752:1753, 1/1/1772:1773 | No text annotation | homologous J4_8P9A_016 J4_24280.2 | |
| J4_6HHQ_006 | 1/1/2130:2134, 1/1/2146:2150, 1/1/2186:2190, 1/1/2317:2322 | No text annotation | homologous J4_8P9A_017 J4_07509.2 | |
| J4_6HHQ_007 | 1/1/2192:2194, 1/1/2248:2249, 1/1/2267:2276, 1/1/2310:2315 | No text annotation | homologous J4_8C3A_007 NA | |
| J4_6HHQ_008 | 1/1/2654:2658, 1/1/2712:2716, 1/1/2740:2742, 1/1/2751:2753 | No text annotation | homologous J4_8P9A_019 J4_04930.6 | |
| J4_6HHQ_009 | 1/1/3010:3012, 1/1/3042:3043, 1/1/3098:3100, 1/1/3134:3136 | No text annotation | homologous J4_8P9A_020 J4_65356.1 | |
| J4_6HHQ_010 | 1/A/31:35, 1/A/473:516, 1/A/536:546, 1/A/592:595 | No text annotation | ||
| J4_6HHQ_011 | 1/A/99:107, 1/A/307:309, 1/A/357:361, 1/A/383:384 | No text annotation | homologous J4_8P9A_021 J4_15241.1 | |
| J4_6HHQ_012 | 1/A/622:624, 1/A/975:980, 1/A/1021:1032, 1/A/1103:1104 | No text annotation | homologous J4_8P9A_022 J4_61885.6 | |
| J4_6HHQ_013 | 1/AR/112:113, 1/AR/267:272, 1/AR/293:299, 1/AR/316:319 | No text annotation | homologous J4_8P9A_012 J4_45801.6 | |
| J4_6HHQ_014 | 1/AR/185:189, 1/AR/205:208, 1/AR/212:214, 1/AR/226:231 | No text annotation | homologous J4_8P9A_013 J4_12410.1 | |
| J4_6HHQ_015 | 1/AR/1451:1457, 1/AR/1475:1476, 1/AR/1877:1880, 1/AR/2352:2353 | No text annotation | homologous J4_8P9A_014 J4_87855.1 | |
| J4_6HHQ_016 | 1/AR/1492:1496, 1/AR/1520:1525, 1/AR/1614:1615, 1/AR/1829:1836 | No text annotation | homologous J4_8P9A_015 J4_69051.6 | |
| J4_6HHQ_017 | 1/AR/1674:1675, 1/AR/1693:1694, 1/AR/1752:1753, 1/AR/1772:1773 | No text annotation | homologous J4_8P9A_016 J4_24280.2 | |
| J4_6HHQ_018 | 1/AR/2130:2134, 1/AR/2146:2150, 1/AR/2186:2190, 1/AR/2317:2322 | No text annotation | homologous J4_8P9A_017 J4_07509.2 | |
| J4_6HHQ_019 | 1/AR/2192:2194, 1/AR/2248:2249, 1/AR/2267:2276, 1/AR/2310:2315 | No text annotation | homologous J4_8P9A_018 J4_93343.1 | |
| J4_6HHQ_020 | 1/AR/2654:2658, 1/AR/2712:2716, 1/AR/2740:2742, 1/AR/2751:2753 | No text annotation | homologous J4_8P9A_019 J4_04930.6 | |
| J4_6HHQ_021 | 1/AR/3010:3012, 1/AR/3042:3043, 1/AR/3098:3100, 1/AR/3134:3136 | No text annotation | homologous J4_8P9A_020 J4_65356.1 | |
| J4_6HHQ_022 | 1/sR/99:107, 1/sR/307:309, 1/sR/357:361, 1/sR/383:384 | No text annotation | homologous J4_8P9A_021 J4_15241.1 | |
| J4_6HHQ_023 | 1/sR/622:624, 1/sR/975:980, 1/sR/1021:1032, 1/sR/1103:1104 | No text annotation | homologous J4_8P9A_022 J4_61885.6 | |
| J5_6HHQ_001 | 1/1/20:22, 1/4/35:42, 1/4/102:107, 1/4/115:116, 1/4/137:139 | No text annotation | homologous J5_8P9A_010 J5_01737.2 | |
| J5_6HHQ_002 | 1/1/658:663, 1/1/799:802, 1/1/941:944, 1/1/1375:1376, 1/1/1431:1437 | No text annotation | homologous J5_8P9A_011 J5_63811.1 | |
| J5_6HHQ_003 | 1/1/675:678, 1/1/702:706, 1/1/713:721, 1/1/749:751, 1/1/782:787 | No text annotation | homologous J5_8P9A_012 J5_23272.1 | |
| J5_6HHQ_004 | 1/1/1906:1914, 1/1/1938:1939, 1/1/2109:2110, 1/1/2114:2122, 1/1/2331:2333 | No text annotation | homologous J5_8P9A_013 J5_62523.6 | |
| J5_6HHQ_005 | 1/1/2399:2406, 1/1/2815:2823, 1/1/2867:2876, 1/1/2951:2957, 1/1/2975:2980 | No text annotation | ||
| J5_6HHQ_006 | 1/1/2416:2419, 1/1/2611:2614, 1/1/2627:2628, 1/1/2650:2651, 1/1/2798:2804 | No text annotation | homologous J5_8P9A_015 J5_08912.1 | |
| J5_6HHQ_007 | 1/A/54:57, 1/A/90:97, 1/A/386:388, 1/A/409:411, 1/A/422:426 | No text annotation | homologous J5_8P9A_017 J5_59910.6 | |
| J5_6HHQ_008 | 1/A/124:143, 1/A/172:182, 1/A/203:204, 1/A/263:265, 1/A/289:293 | No text annotation | ||
| J5_6HHQ_009 | 1/A/124:143, 1/A/172:182, 1/A/203:204, 1/A/263:267, 1/A/288:293 | No text annotation | ||
| J5_6HHQ_010 | 1/A/636:641, 1/A/693:698, 1/A/740:744, 1/A/807:817, 1/A/854:860 | No text annotation | ||
| J5_6HHQ_011 | 1/AR/20:22, 1/AT/35:42, 1/AT/102:107, 1/AT/115:116, 1/AT/137:139 | No text annotation | homologous J5_8P9A_010 J5_01737.2 | |
| J5_6HHQ_012 | 1/AR/658:663, 1/AR/799:802, 1/AR/941:944, 1/AR/1375:1376, 1/AR/1431:1437 | No text annotation | homologous J5_8P9A_011 J5_63811.1 | |
| J5_6HHQ_013 | 1/AR/675:678, 1/AR/702:706, 1/AR/713:721, 1/AR/749:751, 1/AR/782:787 | No text annotation | homologous J5_8P9A_012 J5_23272.1 | |
| J5_6HHQ_014 | 1/AR/1906:1914, 1/AR/1938:1939, 1/AR/2109:2110, 1/AR/2114:2122, 1/AR/2331:2333 | No text annotation | homologous J5_8P9A_013 J5_62523.6 | |
| J5_6HHQ_015 | 1/AR/2399:2406, 1/AR/2815:2823, 1/AR/2867:2875, 1/AR/2952:2957, 1/AR/2975:2980 | No text annotation | ||
| J5_6HHQ_016 | 1/AR/2416:2419, 1/AR/2611:2614, 1/AR/2627:2628, 1/AR/2650:2651, 1/AR/2798:2804 | No text annotation | homologous J5_8P9A_015 J5_08912.1 | |
| J5_6HHQ_017 | 1/sR/31:35, 1/sR/473:479, 1/sR/509:516, 1/sR/536:546, 1/sR/592:595 | No text annotation | ||
| J5_6HHQ_018 | 1/sR/54:57, 1/sR/90:97, 1/sR/386:388, 1/sR/409:411, 1/sR/422:426 | No text annotation | homologous J5_8P9A_017 J5_59910.6 | |
| J5_6HHQ_019 | 1/sR/636:641, 1/sR/693:698, 1/sR/740:744, 1/sR/807:817, 1/sR/854:860 | No text annotation | ||
| J6_6HHQ_001 | 1/1/22:27, 1/1/58:68, 1/1/75:79, 1/1/106:110, 1/1/321:331, 1/4/32:35 | No text annotation | ||
| J6_6HHQ_002 | 1/1/2416:2419, 1/1/2611:2614, 1/1/2627:2628, 1/1/2650:2653, 1/1/2754:2765, 1/1/2793:2804 | No text annotation | ||
| J6_6HHQ_003 | 1/AR/22:27, 1/AR/58:68, 1/AR/75:79, 1/AR/106:110, 1/AR/321:331, 1/AT/32:35 | No text annotation | ||
| J6_6HHQ_004 | 1/AR/2416:2419, 1/AR/2611:2614, 1/AR/2627:2628, 1/AR/2650:2653, 1/AR/2754:2765, 1/AR/2793:2804 | No text annotation | ||
| J7_6HHQ_001 | 1/1/949:954, 1/1/967:968, 1/1/1114:1117, 1/1/1141:1146, 1/1/1157:1161, 1/1/1338:1339, 1/1/1365:1370 | No text annotation | ||
| J7_6HHQ_002 | 1/AR/949:954, 1/AR/967:968, 1/AR/1114:1117, 1/AR/1141:1146, 1/AR/1157:1161, 1/AR/1338:1339, 1/AR/1365:1370 | No text annotation |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| J3_6HHQ_041 | No text annotation | ||
| J4_6HHQ_001 | No text annotation |
Coloring options: