Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
HL_4V9I_0011/AA/12:22No text annotation
Not in a motif group
homologous
HL_4LFB_001
HL_89881.2
HL_4V9I_0031/AA/158:163GNRA
Not in a motif group
homologous
HL_4LFB_003
HL_42097.2
HL_4V9I_0041/AA/189C:189HNo text annotation
Not in a motif group
homologous
HL_6CZR_075
HL_10278.1
HL_4V9I_0051/AA/200:217No text annotation
Not in a motif group
homologous
HL_6CZR_076
HL_34168.2
HL_4V9I_0061/AA/259:267No text annotation
Not in a motif group
homologous
HL_4LFB_006
HL_69023.2
HL_4V9I_0071/AA/296:301GNRA
Not in a motif group
homologous
HL_4LFB_007
HL_42097.2
HL_4V9I_0081/AA/320:333No text annotation
Not in a motif group
homologous
HL_4LFB_008
HL_81205.2
HL_4V9I_0091/AA/342:347No text annotation
Not in a motif group
homologous
HL_6CZR_080
HL_03562.2
HL_4V9I_0101/AA/379:384GNRA
Not in a motif group
homologous
HL_4LFB_010
HL_42097.2
HL_4V9I_0111/AA/419:424UNCG
Not in a motif group
homologous
HL_5J7L_011
HL_03562.2
HL_4V9I_0121/AA/458:473No text annotation
Not in a motif group
homologous
HL_4LFB_012
HL_43656.2
HL_4V9I_0131/AA/522:527No text annotation
Not in a motif group
geometric
HL_4WF9_003
HL_75407.1
HL_4V9I_0141/AA/617:623No text annotation
Not in a motif group
homologous
HL_4LFB_014
HL_26881.1
HL_4V9I_0151/AA/689:698No text annotation
Not in a motif group
homologous
HL_5J7L_015
HL_12326.1
HL_4V9I_0161/AA/726:731Other HL
Not in a motif group
homologous
HL_4LFB_016
HL_87030.2
HL_4V9I_0171/AA/786:796No text annotation
Not in a motif group
homologous
HL_4LFB_017
HL_12326.1
HL_4V9I_0181/AA/838:848No text annotation
Not in a motif group
homologous
HL_6CZR_089
HL_53837.1
HL_4V9I_0191/AA/862:867GNRA
Not in a motif group
homologous
HL_4LFB_019
HL_42097.2
HL_4V9I_0201/AA/897:902GNRA
Not in a motif group
homologous
HL_5J7L_020
HL_42097.2
HL_4V9I_0211/AA/963:972No text annotation
Not in a motif group
homologous
HL_4LFB_021
NA
HL_4V9I_0221/AA/1012:1017GNRA
Not in a motif group
homologous
HL_4LFB_022
HL_42097.2
HL_4V9I_0231/AA/1076:1081GNRA
Not in a motif group
homologous
HL_4LFB_024
HL_42097.2
HL_4V9I_0241/AA/1089:1096No text annotation
Not in a motif group
homologous
HL_5J7L_024
HL_71554.2
HL_4V9I_0251/AA/1128:1143No text annotation
Not in a motif group
HL_4V9I_0261/AA/1165:1171GNRA
Not in a motif group
homologous
HL_4LFB_027
HL_42097.2
HL_4V9I_0271/AA/1265:1270Other HL
Not in a motif group
homologous
HL_4LFB_028
HL_42097.2
HL_4V9I_0281/AA/1314:1323No text annotation
Not in a motif group
homologous
HL_4LFB_029
HL_89380.2
HL_4V9I_0291/AA/1356:1366No text annotation
Not in a motif group
HL_4V9I_0301/AA/1445:1457UNCG
Not in a motif group
homologous
HL_5J7L_030
HL_03562.2
HL_4V9I_0311/AA/1515:1520No text annotation
Not in a motif group
homologous
HL_4LFB_032
NA
HL_4V9I_0321/AV/13:23No text annotation
Not in a motif group
homologous
HL_5B63_003
HL_25462.2
HL_4V9I_0331/AV/32:40No text annotation
Not in a motif group
homologous
HL_6CFJ_107
NA
HL_4V9I_0341/AV/54:62T-loop with 2 stacked bulged bases
Not in a motif group
homologous
HL_4WT8_217
HL_22280.1
HL_4V9I_0361/AW/30:40No text annotation
Not in a motif group
homologous
HL_4V7M_039
HL_36684.1
HL_4V9I_0371/AW/53:61T-loop with 2 stacked bulged bases
Not in a motif group
homologous
HL_1U0B_003
HL_71309.1
HL_4V9I_0381/AY/11:24No text annotation
HL_22629.1
HL_4V9I_0391/AY/31:39tRNA anticodon loop
HL_53597.2
HL_4V9I_0401/AY/52:62No text annotation
HL_22031.1
HL_4V9I_0411/BA/57:66No text annotation
Not in a motif group
homologous
HL_7RQB_001
HL_99167.1
HL_4V9I_0421/BA/85:93No text annotation
Not in a motif group
geometric
HL_2Y8W_001
HL_01057.1
HL_4V9I_0431/BA/120:125No text annotation
Not in a motif group
homologous
HL_4WF9_003
HL_75407.1
HL_4V9I_0441/BA/135:140No text annotation
Not in a motif group
homologous
HL_7RQB_004
HL_79921.3
HL_4V9I_0461/BA/182:189No text annotation
Not in a motif group
geometric
HL_7RQB_006
HL_06192.2
HL_4V9I_0471/BA/213:218No text annotation
Not in a motif group
homologous
HL_7RQB_007
HL_02862.2
HL_4V9I_0481/BA/234:240No text annotation
Not in a motif group
homologous
HL_7RQB_008
HL_67216.7
HL_4V9I_0491/BA/269:272No text annotation
Not in a motif group
HL_4V9I_0501/BA/328:335No text annotation
Not in a motif group
homologous
HL_7RQB_010
HL_89380.2
HL_4V9I_0511/BA/342:346No text annotation
Not in a motif group
homologous
HL_7RQB_011
HL_75407.1
HL_4V9I_0521/BA/350:358No text annotation
Not in a motif group
homologous
HL_7RQB_012
HL_08002.9
HL_4V9I_0531/BA/408:418No text annotation
Not in a motif group
homologous
HL_7RQB_013
HL_91503.4
HL_4V9I_0541/BA/436:443No text annotation
Not in a motif group
homologous
HL_7RQB_014
HL_96598.1
HL_4V9I_0551/BA/487:492No text annotation
Not in a motif group
homologous
HL_7RQB_015
HL_42097.2
HL_4V9I_0561/BA/512:517No text annotation
Not in a motif group
homologous
HL_7RQB_016
HL_42097.2
HL_4V9I_0581/BA/588:597No text annotation
Not in a motif group
geometric
HL_7RQB_018
HL_89380.2
HL_4V9I_0591/BA/634:640No text annotation
Not in a motif group
homologous
HL_7RQB_019
HL_32369.1
HL_4V9I_0601/BA/653:658No text annotation
Not in a motif group
homologous
HL_7RQB_020
HL_42097.2
HL_4V9I_0611/BA/665:671GNRA with one bulged base
Not in a motif group
homologous
HL_4WF9_021
HL_42097.2
HL_4V9I_0621/BA/758:765No text annotation
Not in a motif group
homologous
HL_7RQB_022
HL_84085.2
HL_4V9I_0631/BA/790:799No text annotation
Not in a motif group
homologous
HL_7RQB_023
HL_39334.6
HL_4V9I_0641/BA/825:831No text annotation
Not in a motif group
homologous
HL_7A0S_023
HL_27930.1
HL_4V9I_0651/BA/872:877No text annotation
Not in a motif group
homologous
HL_4WF9_025
HL_64365.1
HL_4V9I_0671/BA/999:1006No text annotation
Not in a motif group
homologous
HL_7RQB_027
HL_42097.2
HL_4V9I_0681/BA/1023:1030No text annotation
Not in a motif group
homologous
HL_7RQB_028
HL_64430.2
HL_4V9I_0701/BA/1216:1222No text annotation
Not in a motif group
HL_4V9I_0711/BA/1267:1272No text annotation
Not in a motif group
homologous
HL_7RQB_032
HL_42097.2
HL_4V9I_0721/BA/1326:1334No text annotation
Not in a motif group
homologous
HL_7RQB_033
HL_89380.2
HL_4V9I_0731/BA/1369:1375No text annotation
Not in a motif group
homologous
HL_7RQB_034
HL_46680.1
HL_4V9I_0741/BA/1408:1413No text annotation
Not in a motif group
homologous
HL_7RQB_035
HL_87030.2
HL_4V9I_0751/BA/1434:1443No text annotation
Not in a motif group
homologous
HL_7RQB_036
HL_69023.2
HL_4V9I_0761/BA/1497:1507No text annotation
Not in a motif group
HL_4V9I_0771/BA/1537:1543No text annotation
Not in a motif group
HL_4V9I_0791/BA/1611:1614No text annotation
Not in a motif group
homologous
HL_7RQB_039
HL_38927.2
HL_4V9I_0801/BA/1657:1664No text annotation
Not in a motif group
homologous
HL_7RQB_040
HL_64430.2
HL_4V9I_0811/BA/1676:1681No text annotation
Not in a motif group
homologous
HL_7RQB_041
HL_01057.1
HL_4V9I_0821/BA/1737:1742No text annotation
Not in a motif group
geometric
HL_7RQB_042
HL_03562.2
HL_4V9I_0831/BA/1762:1772No text annotation
Not in a motif group
HL_4V9I_0841/BA/1782:1786No text annotation
Not in a motif group
homologous
HL_7RQB_044
HL_76539.2
HL_4V9I_0851/BA/1807:1817No text annotation
Not in a motif group
homologous
HL_5J7L_178
HL_43613.5
HL_4V9I_0861/BA/1836:1841No text annotation
Not in a motif group
homologous
HL_7RQB_046
HL_42097.2
HL_4V9I_0871/BA/1894:1899No text annotation
Not in a motif group
homologous
HL_7RQB_047
HL_42097.2
HL_4V9I_0881/BA/1931:1941No text annotation
Not in a motif group
geometric
HL_5TBW_049
HL_71924.2
HL_4V9I_0891/BA/1970:1978No text annotation
Not in a motif group
homologous
HL_7RQB_049
HL_51824.1
HL_4V9I_0901/BA/2048:2057No text annotation
Not in a motif group
homologous
HL_7RQB_050
HL_90642.6
HL_4V9I_0911/BA/2164:2169No text annotation
Not in a motif group
homologous
HL_5J7L_184
NA
HL_4V9I_0921/BA/2225:2230No text annotation
Not in a motif group
geometric
HL_6U8D_003
HL_89098.1
HL_4V9I_0931/BA/2259:2267No text annotation
Not in a motif group
homologous
HL_7RQB_053
NA
HL_4V9I_0941/BA/2275:2287No text annotation
Not in a motif group
homologous
HL_7RQB_054
HL_19870.6
HL_4V9I_0951/BA/2314:2324No text annotation
Not in a motif group
HL_4V9I_0961/BA/2335:2342No text annotation
Not in a motif group
homologous
HL_7RQB_056
HL_12078.2
HL_4V9I_0971/BA/2366:2373No text annotation
Not in a motif group
homologous
HL_7RQB_057
HL_09136.1
HL_4V9I_0981/BA/2385:2390No text annotation
Not in a motif group
homologous
HL_7RQB_058
HL_42097.2
HL_4V9I_0991/BA/2415:2424No text annotation
Not in a motif group
homologous
HL_7RQB_059
HL_30784.2
HL_4V9I_1001/BA/2482:2490No text annotation
Not in a motif group
homologous
HL_7RQB_060
HL_06192.2
HL_4V9I_1011/BA/2539:2546No text annotation
Not in a motif group
homologous
HL_7RQB_061
HL_91104.1
HL_4V9I_1021/BA/2562:2568No text annotation
Not in a motif group
homologous
HL_4WF9_058
HL_43656.2
HL_4V9I_1031/BA/2605:2610No text annotation
Not in a motif group
homologous
HL_7RQB_063
HL_42097.2
HL_4V9I_1041/BA/2669:2674No text annotation
Not in a motif group
geometric
HL_5J7L_143
HL_75407.1
HL_4V9I_1051/BA/2712:2717No text annotation
Not in a motif group
homologous
HL_7RQB_065
HL_53171.2
HL_4V9I_1061/BA/2757:2771No text annotation
Not in a motif group
homologous
HL_7RQB_066
HL_56677.7
HL_4V9I_1081/BA/2828:2836No text annotation
Not in a motif group
homologous
HL_7RQB_068
HL_27930.1
HL_4V9I_1091/BA/2865:2870No text annotation
Not in a motif group
homologous
HL_7RQB_069
HL_42097.2
HL_4V9I_1101/BB/38:44No text annotation
Not in a motif group
homologous
HL_7RQB_070
HL_87939.1
HL_4V9I_1111/BB/86:91No text annotation
Not in a motif group
homologous
HL_7A0S_070
HL_42097.2
HL_4V9I_1121/CA/13:23No text annotation
Not in a motif group
homologous
HL_4LFB_001
HL_89881.2
HL_4V9I_1131/CA/76:88No text annotation
Not in a motif group
HL_4V9I_1141/CA/153:158GNRA
Not in a motif group
homologous
HL_4LFB_003
HL_42097.2
HL_4V9I_1151/CA/187:192No text annotation
Not in a motif group
homologous
HL_6CZR_075
HL_10278.1
HL_4V9I_1161/CA/207:213No text annotation
Not in a motif group
homologous
HL_6CZR_076
HL_34168.2
HL_4V9I_1171/CA/255:263No text annotation
Not in a motif group
homologous
HL_4LFB_006
HL_69023.2
HL_4V9I_1181/CA/292:297GNRA
Not in a motif group
homologous
HL_4LFB_007
HL_42097.2
HL_4V9I_1191/CA/316:329No text annotation
Not in a motif group
homologous
HL_4LFB_008
HL_81205.2
HL_4V9I_1201/CA/338:343No text annotation
Not in a motif group
homologous
HL_6CZR_080
HL_03562.2
HL_4V9I_1211/CA/375:380GNRA
Not in a motif group
homologous
HL_4LFB_010
HL_42097.2
HL_4V9I_1221/CA/415:420UNCG
Not in a motif group
homologous
HL_5J7L_011
HL_03562.2
HL_4V9I_1231/CA/453:459No text annotation
Not in a motif group
homologous
HL_4LFB_012
HL_43656.2
HL_4V9I_1241/CA/506:511No text annotation
Not in a motif group
geometric
HL_5J7L_143
HL_75407.1
HL_4V9I_1251/CA/601:607No text annotation
Not in a motif group
homologous
HL_4LFB_014
HL_26881.1
HL_4V9I_1261/CA/673:682No text annotation
Not in a motif group
homologous
HL_5J7L_015
HL_12326.1
HL_4V9I_1271/CA/710:715Other HL
Not in a motif group
homologous
HL_4LFB_016
HL_87030.2
HL_4V9I_1281/CA/770:780No text annotation
Not in a motif group
homologous
HL_4LFB_017
HL_12326.1
HL_4V9I_1291/CA/822:826No text annotation
Not in a motif group
homologous
HL_4LFB_018
HL_38927.2
HL_4V9I_1301/CA/840:845GNRA
Not in a motif group
homologous
HL_4LFB_019
HL_42097.2
HL_4V9I_1311/CA/875:880GNRA
Not in a motif group
homologous
HL_4LFB_020
HL_42097.2
HL_4V9I_1321/CA/941:950No text annotation
Not in a motif group
homologous
HL_4LFB_021
NA
HL_4V9I_1331/CA/991:996GNRA
Not in a motif group
homologous
HL_4LFB_022
HL_42097.2
HL_4V9I_1341/CA/1059:1064GNRA
Not in a motif group
homologous
HL_4LFB_024
HL_42097.2
HL_4V9I_1351/CA/1072:1079No text annotation
Not in a motif group
homologous
HL_5J7L_024
HL_71554.2
HL_4V9I_1361/CA/1111:1126No text annotation
Not in a motif group
HL_4V9I_1371/CA/1148:1153GNRA
Not in a motif group
homologous
HL_4LFB_027
HL_42097.2
HL_4V9I_1381/CA/1247:1252Other HL
Not in a motif group
homologous
HL_4LFB_028
HL_42097.2
HL_4V9I_1391/CA/1296:1305No text annotation
Not in a motif group
homologous
HL_4LFB_029
HL_89380.2
HL_4V9I_1401/CA/1338:1349No text annotation
Not in a motif group
HL_4V9I_1411/CA/1430:1435UNCG
Not in a motif group
homologous
HL_5J7L_030
HL_03562.2
HL_4V9I_1421/CA/1493:1498No text annotation
Not in a motif group
homologous
HL_4LFB_032
NA
HL_4V9I_1431/CV/13:23No text annotation
Not in a motif group
homologous
HL_4TUE_033
HL_25462.2
HL_4V9I_1441/CV/32:40No text annotation
Not in a motif group
homologous
HL_5E81_212
NA
HL_4V9I_1451/CV/54:62T-loop with 2 stacked bulged bases
Not in a motif group
homologous
HL_4YCO_003
HL_22280.1
HL_4V9I_1471/CW/30:40No text annotation
Not in a motif group
homologous
HL_4WSM_225
HL_36684.1
HL_4V9I_1481/CW/52:62No text annotation
Not in a motif group
geometric
HL_4V7M_040
HL_22031.1
HL_4V9I_1491/CY/11:24No text annotation
Not in a motif group
homologous
HL_4V9I_038
HL_22629.1
HL_4V9I_1511/CY/52:62No text annotation
Not in a motif group
homologous
HL_4V9I_040
HL_22031.1
HL_4V9I_1521/DA/57:66No text annotation
Not in a motif group
homologous
HL_7RQB_001
HL_99167.1
HL_4V9I_1531/DA/85:93No text annotation
Not in a motif group
geometric
HL_5TBW_022
HL_94803.2
HL_4V9I_1541/DA/120:125No text annotation
Not in a motif group
homologous
HL_7RQB_003
HL_75407.1
HL_4V9I_1551/DA/135:140No text annotation
Not in a motif group
homologous
HL_7RQB_004
HL_79921.3
HL_4V9I_1571/DA/182:189No text annotation
Not in a motif group
geometric
HL_7RQB_006
HL_06192.2
HL_4V9I_1581/DA/213:218No text annotation
Not in a motif group
homologous
HL_7RQB_007
HL_02862.2
HL_4V9I_1591/DA/234:240No text annotation
Not in a motif group
homologous
HL_7RQB_008
HL_67216.7
HL_4V9I_1601/DA/269:272No text annotation
Not in a motif group
HL_4V9I_1611/DA/328:335No text annotation
Not in a motif group
homologous
HL_7RQB_010
HL_89380.2
HL_4V9I_1621/DA/342:346No text annotation
Not in a motif group
homologous
HL_7RQB_011
HL_75407.1
HL_4V9I_1631/DA/350:358No text annotation
Not in a motif group
homologous
HL_5J7L_144
HL_08002.9
HL_4V9I_1641/DA/408:418No text annotation
Not in a motif group
homologous
HL_7RQB_013
HL_91503.4
HL_4V9I_1651/DA/436:443No text annotation
Not in a motif group
homologous
HL_7RQB_014
HL_96598.1
HL_4V9I_1661/DA/487:492GNRA
Not in a motif group
homologous
HL_5J7L_147
HL_42097.2
HL_4V9I_1671/DA/512:517No text annotation
Not in a motif group
homologous
HL_7RQB_016
HL_42097.2
HL_4V9I_1691/DA/588:597No text annotation
Not in a motif group
geometric
HL_7RQB_018
HL_89380.2
HL_4V9I_1701/DA/634:640No text annotation
Not in a motif group
homologous
HL_7RQB_019
HL_32369.1
HL_4V9I_1711/DA/653:658No text annotation
Not in a motif group
homologous
HL_7RQB_020
HL_42097.2
HL_4V9I_1721/DA/665:671No text annotation
Not in a motif group
homologous
HL_7RQB_021
HL_42097.2
HL_4V9I_1731/DA/758:765No text annotation
Not in a motif group
homologous
HL_7RQB_022
HL_84085.2
HL_4V9I_1741/DA/790:799No text annotation
Not in a motif group
homologous
HL_7RQB_023
HL_39334.6
HL_4V9I_1751/DA/825:831No text annotation
Not in a motif group
homologous
HL_7A0S_023
HL_27930.1
HL_4V9I_1761/DA/872:877No text annotation
Not in a motif group
homologous
HL_7RQB_025
HL_64365.1
HL_4V9I_1771/DA/929:938No text annotation
Not in a motif group
HL_4V9I_1781/DA/999:1006No text annotation
Not in a motif group
homologous
HL_7RQB_027
HL_42097.2
HL_4V9I_1791/DA/1023:1030No text annotation
Not in a motif group
homologous
HL_7RQB_028
HL_64430.2
HL_4V9I_1811/DA/1215:1223No text annotation
Not in a motif group
HL_4V9I_1821/DA/1267:1272No text annotation
Not in a motif group
homologous
HL_7RQB_032
HL_42097.2
HL_4V9I_1831/DA/1326:1334No text annotation
Not in a motif group
homologous
HL_7RQB_033
HL_89380.2
HL_4V9I_1841/DA/1369:1375No text annotation
Not in a motif group
homologous
HL_7RQB_034
HL_46680.1
HL_4V9I_1851/DA/1408:1413No text annotation
Not in a motif group
homologous
HL_7RQB_035
HL_87030.2
HL_4V9I_1861/DA/1434:1443No text annotation
Not in a motif group
homologous
HL_7RQB_036
HL_69023.2
HL_4V9I_1871/DA/1497:1507No text annotation
Not in a motif group
HL_4V9I_1881/DA/1537:1543No text annotation
Not in a motif group
HL_4V9I_1901/DA/1611:1614No text annotation
Not in a motif group
homologous
HL_7RQB_039
HL_38927.2
HL_4V9I_1911/DA/1657:1664No text annotation
Not in a motif group
homologous
HL_7RQB_040
HL_64430.2
HL_4V9I_1921/DA/1676:1681No text annotation
Not in a motif group
homologous
HL_7RQB_041
HL_01057.1
HL_4V9I_1931/DA/1737:1742UNCG
Not in a motif group
geometric
HL_1KUQ_001
HL_03562.2
HL_4V9I_1941/DA/1762:1772No text annotation
Not in a motif group
HL_4V9I_1951/DA/1782:1786No text annotation
Not in a motif group
homologous
HL_7RQB_044
HL_76539.2
HL_4V9I_1961/DA/1807:1817No text annotation
Not in a motif group
homologous
HL_7RQB_045
HL_43613.5
HL_4V9I_1971/DA/1836:1841No text annotation
Not in a motif group
homologous
HL_7RQB_046
HL_42097.2
HL_4V9I_1981/DA/1894:1899No text annotation
Not in a motif group
homologous
HL_7RQB_047
HL_42097.2
HL_4V9I_1991/DA/1931:1941No text annotation
Not in a motif group
geometric
HL_5TBW_049
HL_71924.2
HL_4V9I_2001/DA/1970:1978No text annotation
Not in a motif group
homologous
HL_7RQB_049
HL_51824.1
HL_4V9I_2011/DA/2048:2057No text annotation
Not in a motif group
homologous
HL_7RQB_050
HL_90642.6
HL_4V9I_2021/DA/2164:2169No text annotation
Not in a motif group
homologous
HL_7RQB_051
NA
HL_4V9I_2031/DA/2225:2230No text annotation
Not in a motif group
geometric
HL_6U8D_003
HL_89098.1
HL_4V9I_2041/DA/2259:2267No text annotation
Not in a motif group
homologous
HL_7A0S_052
HL_53171.2
HL_4V9I_2051/DA/2275:2287No text annotation
Not in a motif group
homologous
HL_7RQB_054
HL_19870.6
HL_4V9I_2061/DA/2314:2324No text annotation
Not in a motif group
HL_4V9I_2071/DA/2335:2342No text annotation
Not in a motif group
homologous
HL_7RQB_056
HL_12078.2
HL_4V9I_2081/DA/2366:2373No text annotation
Not in a motif group
homologous
HL_7RQB_057
HL_09136.1
HL_4V9I_2091/DA/2385:2390No text annotation
Not in a motif group
homologous
HL_7RQB_058
HL_42097.2
HL_4V9I_2101/DA/2415:2424No text annotation
Not in a motif group
homologous
HL_7RQB_059
HL_30784.2
HL_4V9I_2111/DA/2482:2490No text annotation
Not in a motif group
homologous
HL_7A0S_059
HL_06192.2
HL_4V9I_2121/DA/2539:2546No text annotation
Not in a motif group
homologous
HL_7RQB_061
HL_91104.1
HL_4V9I_2131/DA/2562:2568No text annotation
Not in a motif group
homologous
HL_7A0S_061
HL_43656.2
HL_4V9I_2141/DA/2605:2610No text annotation
Not in a motif group
homologous
HL_7RQB_063
HL_42097.2
HL_4V9I_2151/DA/2669:2674No text annotation
Not in a motif group
geometric
HL_4YAZ_004
HL_91104.1
HL_4V9I_2161/DA/2712:2717No text annotation
Not in a motif group
homologous
HL_7RQB_065
HL_53171.2
HL_4V9I_2171/DA/2757:2771No text annotation
Not in a motif group
homologous
HL_7RQB_066
HL_56677.7
HL_4V9I_2191/DA/2828:2836No text annotation
Not in a motif group
homologous
HL_7RQB_068
HL_27930.1
HL_4V9I_2201/DA/2865:2870No text annotation
Not in a motif group
homologous
HL_7RQB_069
HL_42097.2
HL_4V9I_2211/DB/38:44No text annotation
Not in a motif group
homologous
HL_7RQB_070
HL_87939.1
HL_4V9I_2221/DB/86:91No text annotation
Not in a motif group
homologous
HL_7A0S_070
HL_42097.2

Problematic loops

#loop idProblemSequence
HL_4V9I_002No text annotation
HL_4V9I_035No text annotation
HL_4V9I_045No text annotation
HL_4V9I_057No text annotation
HL_4V9I_066No text annotation
HL_4V9I_069No text annotation
HL_4V9I_078No text annotation
HL_4V9I_107No text annotation
HL_4V9I_146No text annotation
HL_4V9I_150tRNA anticodon loop
HL_4V9I_156No text annotation
HL_4V9I_168No text annotation
HL_4V9I_180No text annotation
HL_4V9I_189No text annotation
HL_4V9I_218No text annotation

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
IL_4V9I_0011/AA/30:32,
1/AA/552:553
Single bulged G
Not in a motif group
homologous
IL_6CZR_113
IL_00225.3
IL_4V9I_0021/AA/44:45,
1/AA/396:398
Single bulged A
Not in a motif group
homologous
IL_4LFB_002
IL_37497.3
IL_4V9I_0031/AA/47:52,
1/AA/359:361
No text annotation
Not in a motif group
homologous
IL_4LFB_003
IL_11178.1
IL_4V9I_0041/AA/54:56,
1/AA/356:357
Minor groove platform
Not in a motif group
homologous
IL_4LFB_004
IL_93353.1
IL_4V9I_0051/AA/63:66,
1/AA/103:104
Multiple bulged bases
Not in a motif group
homologous
IL_4LFB_005
IL_76389.1
IL_4V9I_0061/AA/67:69,
1/AA/100:102
No text annotation
Not in a motif group
homologous
IL_4LFB_006
IL_95997.1
IL_4V9I_0081/AA/129:131,
1/AA/231:232
Multiple bulged bases
Not in a motif group
homologous
IL_4LFB_007
IL_16396.2
IL_4V9I_0091/AA/132:136,
1/AA/227:230
No text annotation
Not in a motif group
homologous
IL_4LFB_008
IL_58764.3
IL_4V9I_0101/AA/148:153,
1/AA/168:174
tWH-tWH-tHW-tHW
Not in a motif group
homologous
IL_4LFB_009
IL_39753.1
IL_4V9I_0111/AA/186:188,
1/AA/189L:191
No text annotation
Not in a motif group
homologous
IL_4LFB_010
IL_95997.1
IL_4V9I_0121/AA/242:247,
1/AA/277:284
Kink-turn with non-sequential stacking
Not in a motif group
homologous
IL_4LFB_011
IL_45067.2
IL_4V9I_0131/AA/249:252,
1/AA/274:275
No text annotation
Not in a motif group
homologous
IL_4LFB_012
IL_48100.2
IL_4V9I_0141/AA/292:293,
1/AA/304:308
C-loop
Not in a motif group
homologous
IL_4LFB_013
IL_37712.2
IL_4V9I_0151/AA/367:369,
1/AA/392:393
Single bulged U
Not in a motif group
homologous
IL_5J7L_017
IL_83039.14
IL_4V9I_0161/AA/370:375,
1/AA/389:391
No text annotation
Not in a motif group
IL_4V9I_0171/AA/375:376,
1/AA/387:389
Single bulged G
Not in a motif group
geometric
IL_5J7L_019
IL_00225.3
IL_4V9I_0181/AA/409:416,
1/AA/427:433
No text annotation
Not in a motif group
IL_4V9I_0191/AA/446:450,
1/AA/483:488
6x5 Sarcin-Ricin; G-bulge
Not in a motif group
homologous
IL_4LFB_018
IL_88269.3
IL_4V9I_0201/AA/450:456,
1/AA/475:483
No text annotation
Not in a motif group
geometric
IL_6CZR_131
IL_30149.1
IL_4V9I_0211/AA/504:511,
1/AA/540:541
SSU/LSU pseudoknot
Not in a motif group
homologous
IL_4LFB_020
IL_15861.7
IL_4V9I_0221/AA/515:521,
1/AA/528:536
No text annotation
Not in a motif group
geometric
IL_4V88_415
IL_55871.1
IL_4V9I_0231/AA/569:575,
1/AA/880:881
No text annotation
Not in a motif group
homologous
IL_4LFB_022
IL_69996.1
IL_4V9I_0241/AA/580:584,
1/AA/757:761
tSH-tHW-tHS
Not in a motif group
homologous
IL_4LFB_023
IL_17136.1
IL_4V9I_0251/AA/594:596,
1/AA/644:645
Major groove platform
Not in a motif group
homologous
IL_4LFB_024
IL_27635.2
IL_4V9I_0261/AA/597:598,
1/AA/640:643
Major groove minor groove platform; mini C-loop
Not in a motif group
homologous
IL_5J7L_029
IL_09061.6
IL_4V9I_0271/AA/605:612,
1/AA/628:633
No text annotation
Not in a motif group
homologous
IL_4LFB_026
IL_78349.1
IL_4V9I_0281/AA/654:655,
1/AA/751:754
Major groove platform; stack outside cWW
Not in a motif group
homologous
IL_5J7L_031
IL_50694.2
IL_4V9I_0291/AA/657:658,
1/AA/747:749
Major groove platform
Not in a motif group
homologous
IL_4LFB_028
IL_27635.2
IL_4V9I_0301/AA/662:666,
1/AA/740:743
Tandem non-canonical cWW pairs
Not in a motif group
homologous
IL_4LFB_029
IL_71110.1
IL_4V9I_0311/AA/673:678,
1/AA/712:717
No text annotation
Not in a motif group
homologous
IL_4LFB_030
IL_04668.1
IL_4V9I_0321/AA/683:688,
1/AA/699:707
Kink-turn
Not in a motif group
homologous
IL_4LFB_031
IL_37722.1
IL_4V9I_0331/AA/774:778,
1/AA/804:805
Left turn
Not in a motif group
homologous
IL_4LFB_032
IL_29346.1
IL_4V9I_0341/AA/779:783,
1/AA/799:803
tSH-tHW-tHS
Not in a motif group
homologous
IL_4LFB_033
IL_17136.1
IL_4V9I_0351/AA/887:894,
1/AA/905:910
8x6 Sarcin-Ricin with inserted Y; G-bulge
Not in a motif group
homologous
IL_5J7L_038
IL_24606.2
IL_4V9I_0361/AA/922:923,
1/AA/1393:1395
Single bulged A
Not in a motif group
homologous
IL_4LFB_035
IL_37497.3
IL_4V9I_0371/AA/925:927,
1/AA/1390:1391
Single bulged G
Not in a motif group
homologous
IL_4LFB_036
IL_00225.3
IL_4V9I_0381/AA/933:935,
1/AA/1380:1384
Minor groove platform
Not in a motif group
homologous
IL_4LFB_037
IL_47078.1
IL_4V9I_0391/AA/953:954,
1/AA/1226:1228
Minor groove platform
Not in a motif group
homologous
IL_4LFB_038
IL_42622.2
IL_4V9I_0401/AA/993:997,
1/AA/1044:1045
Minor groove platform
Not in a motif group
geometric
IL_6CZR_151
IL_47078.1
IL_4V9I_0421/AA/1000:1007,
1/AA/1022:1041
No text annotation
Not in a motif group
IL_4V9I_0431/AA/1048:1050,
1/AA/1208:1209
Single bulged U
Not in a motif group
homologous
IL_4LFB_042
IL_83039.14
IL_4V9I_0441/AA/1052:1056,
1/AA/1204:1206
Isolated cWS basepair
Not in a motif group
homologous
IL_4LFB_044
IL_76319.2
IL_4V9I_0451/AA/1057:1058,
1/AA/1199:1203
Minor groove platform
Not in a motif group
homologous
IL_4LFB_045
IL_93353.1
IL_4V9I_0461/AA/1060:1061,
1/AA/1195:1197
Single bulged U
Not in a motif group
geometric
IL_4LFB_046
IL_83039.14
IL_4V9I_0471/AA/1061:1063,
1/AA/1193:1195
No text annotation
Not in a motif group
geometric
IL_4LFB_047
IL_95997.1
IL_4V9I_0491/AA/1124:1128,
1/AA/1143:1149
No text annotation
Not in a motif group
geometric
IL_4LFB_048
IL_85222.1
IL_4V9I_0501/AA/1247:1253,
1/AA/1284:1290
No text annotation
Not in a motif group
homologous
IL_4LFB_051
IL_09129.1
IL_4V9I_0511/AA/1255:1259,
1/AA/1276:1282
No text annotation
Not in a motif group
IL_4V9I_0521/AA/1259:1262,
1/AA/1273:1276
Double sheared
Not in a motif group
geometric
IL_5J7L_256
IL_09705.9
IL_4V9I_0531/AA/1303:1308,
1/AA/1329:1334
No text annotation
Not in a motif group
geometric
IL_4LFB_055
IL_19954.2
IL_4V9I_0541/AA/1399:1401,
1/AA/1501:1504
No text annotation
Not in a motif group
homologous
IL_4LFB_056
NA
IL_4V9I_0551/AA/1401:1404,
1/AA/1497:1501
No text annotation
Not in a motif group
geometric
IL_4V88_464
IL_99670.1
IL_4V9I_0561/AA/1405:1407,
1/AA/1494:1496
No text annotation
Not in a motif group
geometric
IL_3TD0_001
IL_95997.1
IL_4V9I_0571/AA/1407:1409,
1/AA/1491:1494
Decoding loop related
Not in a motif group
geometric
IL_3C3Z_002
IL_64417.1
IL_4V9I_0581/AA/1412:1414,
1/AA/1486:1488
No text annotation
Not in a motif group
homologous
IL_5J7L_061
IL_95997.1
IL_4V9I_0591/AA/1416:1419,
1/AA/1481:1484
Double sheared
Not in a motif group
homologous
IL_5J7L_062
IL_09705.9
IL_4V9I_0601/AA/1431:1435,
1/AA/1466:1469
UAA/GAN variation
Not in a motif group
geometric
IL_4LFB_062
IL_07235.1
IL_4V9I_0611/AA/1435:1437,
1/AA/1464:1466
No text annotation
Not in a motif group
homologous
IL_4LFB_063
IL_95997.1
IL_4V9I_0621/AA/1440:1443,
1/AA/1459:1461
No text annotation
Not in a motif group
homologous
IL_4LFB_064
IL_92788.2
IL_4V9I_0641/BA/23:29,
1/BA/534:540
Triple sheared with non-canonical cWW
Not in a motif group
homologous
IL_7RQB_001
IL_66414.6
IL_4V9I_0651/BA/35:36,
1/BA/467:469
Single bulged A
Not in a motif group
homologous
IL_7RQB_002
IL_37497.3
IL_4V9I_0661/BA/41:42,
1/BA/460:462
Minor groove platform
Not in a motif group
homologous
IL_7RQB_003
IL_42622.2
IL_4V9I_0671/BA/79:83,
1/BA/95:102
Kink-turn
Not in a motif group
homologous
IL_7RQB_004
IL_45067.2
IL_4V9I_0681/BA/171:172,
1/BA/200:202
Single stack bend
Not in a motif group
homologous
IL_7RQB_005
IL_76488.2
IL_4V9I_0691/BA/176:182,
1/BA/189:196
8x7 Sarcin-Ricin; G-bulge
Not in a motif group
homologous
IL_7RQB_006
IL_04346.7
IL_4V9I_0701/BA/227:233,
1/BA/241:246
7x6 Sarcin-Ricin; G-bulge
Not in a motif group
homologous