4V5B Internal, Hairpin and 3-way Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_4V5B_001 | 1/AA/33:49 | No text annotation Not in a motif group | ||
| HL_4V5B_002 | 1/AA/86:90 | No text annotation Not in a motif group | geometric HL_5TBW_006 HL_98984.2 | |
| HL_4V5B_003 | 1/AB/59:68 | No text annotation Not in a motif group | homologous HL_7A0S_001 HL_99167.1 | |
| HL_4V5B_004 | 1/AB/85:97 | No text annotation Not in a motif group | ||
| HL_4V5B_005 | 1/AB/122:129 | No text annotation Not in a motif group | ||
| HL_4V5B_006 | 1/AB/137:142 | No text annotation Not in a motif group | geometric HL_4V88_198 HL_56691.2 | |
| HL_4V5B_007 | 1/AB/158:168 | No text annotation Not in a motif group | homologous HL_5J7L_138 HL_81820.1 | |
| HL_4V5B_008 | 1/AB/188:208 | No text annotation Not in a motif group | ||
| HL_4V5B_009 | 1/AB/225:230 | No text annotation Not in a motif group | homologous HL_5J7L_140 HL_27930.1 | |
| HL_4V5B_010 | 1/AB/239:258 | No text annotation Not in a motif group | ||
| HL_4V5B_011 | 1/AB/305:312 | T-loop with 1 bulged base Not in a motif group | homologous HL_4WF9_010 HL_89380.2 | |
| HL_4V5B_012 | 1/AB/319:323 | No text annotation Not in a motif group | ||
| HL_4V5B_013 | 1/AB/327:335 | No text annotation Not in a motif group | homologous HL_4WF9_012 HL_08002.8 | |
| HL_4V5B_014 | 1/AB/381:393 | No text annotation Not in a motif group | ||
| HL_4V5B_015 | 1/AB/410:417 | No text annotation Not in a motif group | homologous HL_5J7L_146 HL_96598.1 | |
| HL_4V5B_016 | 1/AB/462:467 | GNRA Not in a motif group | homologous HL_4WF9_015 HL_42097.1 | |
| HL_4V5B_017 | 1/AB/487:493 | No text annotation Not in a motif group | homologous HL_5J7L_148 HL_42097.1 | |
| HL_4V5B_018 | 1/AB/543:550 | No text annotation Not in a motif group | ||
| HL_4V5B_019 | 1/AB/566:575 | T-loop with 2 stacked bulged bases Not in a motif group | homologous HL_5J7L_150 HL_89380.2 | |
| HL_4V5B_020 | 1/AB/611:617 | No text annotation Not in a motif group | ||
| HL_4V5B_021 | 1/AB/629:634 | GNRA Not in a motif group | homologous HL_5J7L_152 HL_42097.1 | |
| HL_4V5B_022 | 1/AB/641:647 | GNRA with one bulged base Not in a motif group | homologous HL_4WF9_021 HL_42097.1 | |
| HL_4V5B_023 | 1/AB/712:719 | No text annotation Not in a motif group | homologous HL_5J7L_154 HL_84085.2 | |
| HL_4V5B_024 | 1/AB/744:753 | No text annotation Not in a motif group | homologous HL_4WF9_023 HL_39334.6 | |
| HL_4V5B_025 | 1/AB/778:786 | No text annotation Not in a motif group | ||
| HL_4V5B_026 | 1/AB/826:831 | No text annotation Not in a motif group | homologous HL_7A0S_024 HL_64365.1 | |
| HL_4V5B_028 | 1/AB/955:962 | GNRA Not in a motif group | homologous HL_4WF9_027 HL_42097.1 | |
| HL_4V5B_029 | 1/AB/977:986 | No text annotation Not in a motif group | geometric HL_4V9F_003 HL_52841.1 | |
| HL_4V5B_030 | 1/AB/1064:1074 | No text annotation Not in a motif group | homologous HL_5J7L_161 HL_07145.1 | |
| HL_4V5B_031 | 1/AB/1171:1178 | No text annotation Not in a motif group | ||
| HL_4V5B_032 | 1/AB/1221:1228 | No text annotation Not in a motif group | geometric HL_5TBW_006 HL_98984.2 | |
| HL_4V5B_033 | 1/AB/1281:1289 | T-loop with 2 stacked bulged bases Not in a motif group | homologous HL_5J7L_165 HL_89380.2 | |
| HL_4V5B_034 | 1/AB/1324:1330 | No text annotation Not in a motif group | homologous HL_5J7L_166 HL_46680.1 | |
| HL_4V5B_035 | 1/AB/1363:1368 | Other HL Not in a motif group | homologous HL_5J7L_167 HL_87030.2 | |
| HL_4V5B_036 | 1/AB/1389:1398 | No text annotation Not in a motif group | homologous HL_5J7L_168 HL_69023.2 | |
| HL_4V5B_037 | 1/AB/1449:1462 | No text annotation Not in a motif group | ||
| HL_4V5B_038 | 1/AB/1492:1498 | No text annotation Not in a motif group | homologous HL_7RQB_038 HL_46680.1 | |
| HL_4V5B_039 | 1/AB/1533:1538 | UNCG Not in a motif group | homologous HL_5J7L_171 HL_03562.2 | |
| HL_4V5B_040 | 1/AB/1565:1568 | No text annotation Not in a motif group | homologous HL_5J7L_172 HL_38927.2 | |
| HL_4V5B_041 | 1/AB/1612:1619 | No text annotation Not in a motif group | homologous HL_4WF9_038 HL_64430.2 | |
| HL_4V5B_042 | 1/AB/1630:1636 | GNRA with one bulged base Not in a motif group | homologous HL_5J7L_174 HL_42097.1 | |
| HL_4V5B_043 | 1/AB/1691:1696 | UNCG Not in a motif group | geometric HL_4JF2_003 HL_03562.2 | |
| HL_4V5B_044 | 1/AB/1728:1731 | No text annotation Not in a motif group | ||
| HL_4V5B_045 | 1/AB/1777:1787 | No text annotation Not in a motif group | homologous HL_4WF9_043 HL_43613.5 | |
| HL_4V5B_046 | 1/AB/1806:1811 | No text annotation Not in a motif group | homologous HL_5J7L_179 HL_42097.1 | |
| HL_4V5B_047 | 1/AB/1868:1873 | Other HL Not in a motif group | homologous HL_5J7L_180 HL_42097.1 | |
| HL_4V5B_048 | 1/AB/1910:1920 | No text annotation Not in a motif group | geometric HL_5TBW_049 HL_71924.2 | |
| HL_4V5B_049 | 1/AB/1948:1958 | No text annotation Not in a motif group | ||
| HL_4V5B_050 | 1/AB/2027:2036 | No text annotation Not in a motif group | homologous HL_4WF9_047 HL_90642.6 | |
| HL_4V5B_051 | 1/AB/2142:2149 | No text annotation Not in a motif group | ||
| HL_4V5B_052 | 1/AB/2209:2215 | No text annotation Not in a motif group | homologous HL_5J7L_185 HL_16845.6 | |
| HL_4V5B_053 | 1/AB/2248:2256 | No text annotation Not in a motif group | homologous HL_4WF9_049 HL_53171.2 | |
| HL_4V5B_054 | 1/AB/2264:2276 | No text annotation Not in a motif group | homologous HL_5J7L_187 HL_19870.6 | |
| HL_4V5B_055 | 1/AB/2303:2313 | No text annotation Not in a motif group | homologous HL_4WF9_051 NA | |
| HL_4V5B_056 | 1/AB/2324:2331 | No text annotation Not in a motif group | homologous HL_7RQB_056 HL_12078.2 | |
| HL_4V5B_057 | 1/AB/2356:2361 | Other HL Not in a motif group | homologous HL_5J7L_190 HL_87030.2 | |
| HL_4V5B_058 | 1/AB/2374:2379 | GNRA Not in a motif group | homologous HL_5J7L_191 HL_42097.1 | |
| HL_4V5B_059 | 1/AB/2403:2414 | No text annotation Not in a motif group | ||
| HL_4V5B_060 | 1/AB/2471:2479 | No text annotation Not in a motif group | homologous HL_5J7L_193 HL_06192.2 | |
| HL_4V5B_061 | 1/AB/2527:2536 | No text annotation Not in a motif group | geometric HL_4V9F_019 HL_90617.2 | |
| HL_4V5B_062 | 1/AB/2551:2557 | No text annotation Not in a motif group | homologous HL_4WF9_058 HL_43656.2 | |
| HL_4V5B_063 | 1/AB/2594:2599 | GNRA Not in a motif group | homologous HL_4WF9_059 HL_42097.1 | |
| HL_4V5B_064 | 1/AB/2658:2663 | GNRA Not in a motif group | homologous HL_5J7L_197 HL_42097.1 | |
| HL_4V5B_065 | 1/AB/2700:2707 | No text annotation Not in a motif group | ||
| HL_4V5B_066 | 1/AB/2745:2759 | No text annotation Not in a motif group | homologous HL_4WF9_062 HL_56677.7 | |
| HL_4V5B_067 | 1/AB/2795:2801 | Other HL Not in a motif group | homologous HL_5J7L_200 HL_34168.2 | |
| HL_4V5B_068 | 1/AB/2819:2827 | No text annotation Not in a motif group | homologous HL_5J7L_201 HL_27930.1 | |
| HL_4V5B_069 | 1/AB/2856:2861 | No text annotation Not in a motif group | homologous HL_7A0S_068 HL_42097.1 | |
| HL_4V5B_070 | 1/BA/12:22 | No text annotation Not in a motif group | homologous HL_5J7L_001 HL_89881.2 | |
| HL_4V5B_072 | 1/BA/156:165 | No text annotation Not in a motif group | ||
| HL_4V5B_073 | 1/BA/186:191 | GNRA Not in a motif group | homologous HL_5J7L_004 HL_42097.1 | |
| HL_4V5B_075 | 1/BA/259:267 | No text annotation Not in a motif group | homologous HL_5J7L_006 HL_69023.2 | |
| HL_4V5B_076 | 1/BA/296:301 | GNRA Not in a motif group | homologous HL_6CZR_078 HL_42097.1 | |
| HL_4V5B_077 | 1/BA/320:333 | No text annotation Not in a motif group | homologous HL_4LFB_008 HL_81205.2 | |
| HL_4V5B_078 | 1/BA/342:347 | UNCG Not in a motif group | homologous HL_4LFB_009 HL_03562.2 | |
| HL_4V5B_079 | 1/BA/377:386 | No text annotation Not in a motif group | ||
| HL_4V5B_080 | 1/BA/419:424 | UNCG Not in a motif group | homologous HL_5J7L_011 HL_03562.2 | |
| HL_4V5B_082 | 1/BA/522:527 | No text annotation Not in a motif group | geometric HL_4WF9_003 HL_75407.1 | |
| HL_4V5B_083 | 1/BA/617:623 | No text annotation Not in a motif group | homologous HL_5J7L_014 HL_26881.1 | |
| HL_4V5B_084 | 1/BA/684:706 | No text annotation Not in a motif group | ||
| HL_4V5B_085 | 1/BA/726:731 | Other HL Not in a motif group | homologous HL_4LFB_016 HL_87030.2 | |
| HL_4V5B_086 | 1/BA/785:797 | No text annotation Not in a motif group | ||
| HL_4V5B_088 | 1/BA/862:867 | GNRA Not in a motif group | homologous HL_4LFB_019 HL_42097.1 | |
| HL_4V5B_089 | 1/BA/896:903 | No text annotation Not in a motif group | geometric HL_7A0S_056 HL_84085.2 | |
| HL_4V5B_090 | 1/BA/963:972 | No text annotation Not in a motif group | homologous HL_4LFB_021 NA | |
| HL_4V5B_091 | 1/BA/1012:1017 | No text annotation Not in a motif group | ||
| HL_4V5B_092 | 1/BA/1027:1034 | No text annotation Not in a motif group | homologous HL_6CZR_094 NA | |
| HL_4V5B_093 | 1/BA/1089:1096 | No text annotation Not in a motif group | homologous HL_5J7L_024 HL_71554.2 | |
| HL_4V5B_094 | 1/BA/1134:1140 | No text annotation Not in a motif group | ||
| HL_4V5B_096 | 1/BA/1264:1271 | No text annotation Not in a motif group | ||
| HL_4V5B_097 | 1/BA/1314:1323 | No text annotation Not in a motif group | homologous HL_5J7L_028 HL_89380.2 | |
| HL_4V5B_098 | 1/BA/1356:1366 | No text annotation Not in a motif group | homologous HL_4LFB_030 HL_96366.1 | |
| HL_4V5B_100 | 1/BA/1512:1523 | No text annotation Not in a motif group | ||
| HL_4V5B_101 | 1/CA/38:44 | No text annotation Not in a motif group | homologous HL_5J7L_203 HL_87939.1 | |
| HL_4V5B_102 | 1/CA/86:90 | No text annotation Not in a motif group | geometric HL_5TBW_006 HL_98984.2 | |
| HL_4V5B_103 | 1/CB/59:68 | No text annotation Not in a motif group | homologous HL_7A0S_001 HL_99167.1 | |
| HL_4V5B_104 | 1/CB/85:97 | No text annotation Not in a motif group | ||
| HL_4V5B_105 | 1/CB/123:128 | No text annotation Not in a motif group | homologous HL_4WF9_003 HL_75407.1 | |
| HL_4V5B_106 | 1/CB/134:145 | No text annotation Not in a motif group | ||
| HL_4V5B_107 | 1/CB/158:168 | No text annotation Not in a motif group | homologous HL_5J7L_138 HL_81820.1 | |
| HL_4V5B_108 | 1/CB/188:208 | No text annotation Not in a motif group | ||
| HL_4V5B_109 | 1/CB/225:230 | No text annotation Not in a motif group | homologous HL_5J7L_140 HL_27930.1 | |
| HL_4V5B_110 | 1/CB/239:258 | No text annotation Not in a motif group | ||
| HL_4V5B_111 | 1/CB/305:312 | No text annotation Not in a motif group | homologous HL_7A0S_010 HL_89380.2 | |
| HL_4V5B_112 | 1/CB/327:335 | No text annotation Not in a motif group | homologous HL_7A0S_012 HL_08002.8 | |
| HL_4V5B_113 | 1/CB/381:393 | No text annotation Not in a motif group | ||
| HL_4V5B_114 | 1/CB/410:417 | No text annotation Not in a motif group | homologous HL_5J7L_146 HL_96598.1 | |
| HL_4V5B_115 | 1/CB/462:467 | GNRA Not in a motif group | homologous HL_4WF9_015 HL_42097.1 | |
| HL_4V5B_116 | 1/CB/487:493 | No text annotation Not in a motif group | homologous HL_5J7L_148 HL_42097.1 | |
| HL_4V5B_117 | 1/CB/541:552 | No text annotation Not in a motif group | geometric HL_2ZZM_002 HL_23083.1 | |
| HL_4V5B_118 | 1/CB/566:575 | T-loop with 2 stacked bulged bases Not in a motif group | homologous HL_5J7L_150 HL_89380.2 | |
| HL_4V5B_119 | 1/CB/611:617 | No text annotation Not in a motif group | ||
| HL_4V5B_120 | 1/CB/629:634 | GNRA Not in a motif group | homologous HL_5J7L_152 HL_42097.1 | |
| HL_4V5B_121 | 1/CB/641:647 | GNRA with one bulged base Not in a motif group | homologous HL_4WF9_021 HL_42097.1 | |
| HL_4V5B_122 | 1/CB/712:719 | No text annotation Not in a motif group | homologous HL_5J7L_154 HL_84085.2 | |
| HL_4V5B_123 | 1/CB/744:753 | No text annotation Not in a motif group | homologous HL_4WF9_023 HL_39334.6 | |
| HL_4V5B_124 | 1/CB/778:786 | No text annotation Not in a motif group | ||
| HL_4V5B_125 | 1/CB/826:831 | No text annotation Not in a motif group | homologous HL_7A0S_024 HL_64365.1 | |
| HL_4V5B_127 | 1/CB/955:962 | GNRA Not in a motif group | homologous HL_4WF9_027 HL_42097.1 | |
| HL_4V5B_128 | 1/CB/977:986 | No text annotation Not in a motif group | geometric HL_4V9F_003 HL_52841.1 | |
| HL_4V5B_129 | 1/CB/1064:1074 | No text annotation Not in a motif group | homologous HL_5J7L_161 HL_07145.1 | |
| HL_4V5B_130 | 1/CB/1092:1099 | No text annotation Not in a motif group | homologous HL_6PRV_002 HL_84085.2 | |
| HL_4V5B_131 | 1/CB/1171:1178 | No text annotation Not in a motif group | ||
| HL_4V5B_132 | 1/CB/1221:1228 | No text annotation Not in a motif group | geometric HL_5TBW_006 HL_98984.2 | |
| HL_4V5B_133 | 1/CB/1281:1289 | T-loop with 2 stacked bulged bases Not in a motif group | homologous HL_5J7L_165 HL_89380.2 | |
| HL_4V5B_134 | 1/CB/1324:1330 | No text annotation Not in a motif group | homologous HL_5J7L_166 HL_46680.1 | |
| HL_4V5B_135 | 1/CB/1363:1368 | Other HL Not in a motif group | homologous HL_5J7L_167 HL_87030.2 | |
| HL_4V5B_136 | 1/CB/1389:1398 | No text annotation Not in a motif group | homologous HL_5J7L_168 HL_69023.2 | |
| HL_4V5B_137 | 1/CB/1449:1462 | No text annotation Not in a motif group | ||
| HL_4V5B_138 | 1/CB/1492:1498 | No text annotation Not in a motif group | homologous HL_7RQB_038 HL_46680.1 | |
| HL_4V5B_139 | 1/CB/1533:1538 | UNCG Not in a motif group | homologous HL_5J7L_171 HL_03562.2 | |
| HL_4V5B_140 | 1/CB/1565:1568 | No text annotation Not in a motif group | homologous HL_5J7L_172 HL_38927.2 | |
| HL_4V5B_141 | 1/CB/1612:1619 | No text annotation Not in a motif group | homologous HL_4WF9_038 HL_64430.2 | |
| HL_4V5B_142 | 1/CB/1630:1636 | GNRA with one bulged base Not in a motif group | homologous HL_5J7L_174 HL_42097.1 | |
| HL_4V5B_143 | 1/CB/1691:1696 | UNCG Not in a motif group | geometric HL_4JF2_003 HL_03562.2 | |
| HL_4V5B_144 | 1/CB/1728:1731 | No text annotation Not in a motif group | ||
| HL_4V5B_145 | 1/CB/1777:1787 | No text annotation Not in a motif group | homologous HL_4WF9_043 HL_43613.5 | |
| HL_4V5B_146 | 1/CB/1806:1811 | No text annotation Not in a motif group | homologous HL_5J7L_179 HL_42097.1 | |
| HL_4V5B_147 | 1/CB/1868:1873 | Other HL Not in a motif group | homologous HL_5J7L_180 HL_42097.1 | |
| HL_4V5B_148 | 1/CB/1910:1920 | No text annotation Not in a motif group | geometric HL_5TBW_049 HL_71924.2 | |
| HL_4V5B_149 | 1/CB/1948:1958 | No text annotation Not in a motif group | ||
| HL_4V5B_150 | 1/CB/2027:2036 | No text annotation Not in a motif group | homologous HL_4WF9_047 HL_90642.6 | |
| HL_4V5B_151 | 1/CB/2141:2150 | No text annotation Not in a motif group | ||
| HL_4V5B_152 | 1/CB/2209:2215 | No text annotation Not in a motif group | homologous HL_5J7L_185 HL_16845.6 | |
| HL_4V5B_153 | 1/CB/2248:2256 | No text annotation Not in a motif group | homologous HL_4WF9_049 HL_53171.2 | |
| HL_4V5B_154 | 1/CB/2264:2276 | No text annotation Not in a motif group | homologous HL_5J7L_187 HL_19870.6 | |
| HL_4V5B_155 | 1/CB/2303:2313 | No text annotation Not in a motif group | homologous HL_4WF9_051 NA | |
| HL_4V5B_156 | 1/CB/2324:2331 | No text annotation Not in a motif group | homologous HL_7RQB_056 HL_12078.2 | |
| HL_4V5B_157 | 1/CB/2356:2361 | Other HL Not in a motif group | homologous HL_5J7L_190 HL_87030.2 | |
| HL_4V5B_158 | 1/CB/2374:2379 | GNRA Not in a motif group | homologous HL_5J7L_191 HL_42097.1 | |
| HL_4V5B_159 | 1/CB/2404:2413 | No text annotation Not in a motif group | homologous HL_5J7L_192 HL_30784.2 | |
| HL_4V5B_160 | 1/CB/2471:2479 | No text annotation Not in a motif group | homologous HL_5J7L_193 HL_06192.2 | |
| HL_4V5B_161 | 1/CB/2527:2536 | No text annotation Not in a motif group | geometric HL_4V9F_019 HL_90617.2 | |
| HL_4V5B_162 | 1/CB/2551:2557 | No text annotation Not in a motif group | homologous HL_4WF9_058 HL_43656.2 | |
| HL_4V5B_163 | 1/CB/2594:2599 | GNRA Not in a motif group | homologous HL_4WF9_059 HL_42097.1 | |
| HL_4V5B_164 | 1/CB/2658:2663 | GNRA Not in a motif group | homologous HL_5J7L_197 HL_42097.1 | |
| HL_4V5B_165 | 1/CB/2700:2707 | No text annotation Not in a motif group | geometric HL_5TBW_022 HL_94803.1 | |
| HL_4V5B_166 | 1/CB/2745:2759 | No text annotation Not in a motif group | ||
| HL_4V5B_167 | 1/CB/2795:2801 | Other HL Not in a motif group | homologous HL_5J7L_200 HL_34168.2 | |
| HL_4V5B_168 | 1/CB/2819:2827 | No text annotation Not in a motif group | homologous HL_5J7L_201 HL_27930.1 | |
| HL_4V5B_169 | 1/CB/2856:2861 | No text annotation Not in a motif group | homologous HL_7A0S_068 HL_42097.1 | |
| HL_4V5B_170 | 1/DA/12:22 | No text annotation Not in a motif group | homologous HL_5J7L_001 HL_89881.2 | |
| HL_4V5B_171 | 1/DA/83:86 | No text annotation Not in a motif group | ||
| HL_4V5B_172 | 1/DA/156:165 | No text annotation Not in a motif group | ||
| HL_4V5B_173 | 1/DA/186:191 | GNRA Not in a motif group | homologous HL_5J7L_004 HL_42097.1 | |
| HL_4V5B_174 | 1/DA/207:212 | UNCG Not in a motif group | geometric HL_5J7L_030 HL_03562.2 | |
| HL_4V5B_175 | 1/DA/259:267 | No text annotation Not in a motif group | homologous HL_5J7L_006 HL_69023.2 | |
| HL_4V5B_176 | 1/DA/296:301 | GNRA Not in a motif group | homologous HL_4LFB_007 HL_42097.1 | |
| HL_4V5B_177 | 1/DA/320:333 | No text annotation Not in a motif group | homologous HL_4LFB_008 HL_81205.2 | |
| HL_4V5B_178 | 1/DA/342:347 | UNCG Not in a motif group | homologous HL_4LFB_009 HL_03562.2 | |
| HL_4V5B_179 | 1/DA/377:386 | No text annotation Not in a motif group | ||
| HL_4V5B_180 | 1/DA/419:424 | UNCG Not in a motif group | homologous HL_5J7L_011 HL_03562.2 | |
| HL_4V5B_181 | 1/DA/459:472 | No text annotation Not in a motif group | ||
| HL_4V5B_182 | 1/DA/522:527 | No text annotation Not in a motif group | geometric HL_4WF9_003 HL_75407.1 | |
| HL_4V5B_183 | 1/DA/615:625 | No text annotation Not in a motif group | ||
| HL_4V5B_184 | 1/DA/683:707 | No text annotation Not in a motif group | ||
| HL_4V5B_185 | 1/DA/726:731 | Other HL Not in a motif group | homologous HL_5J7L_016 HL_87030.2 | |
| HL_4V5B_186 | 1/DA/785:797 | No text annotation Not in a motif group | ||
| HL_4V5B_187 | 1/DA/840:846 | No text annotation Not in a motif group | geometric HL_5TBW_044 HL_09829.1 | |
| HL_4V5B_188 | 1/DA/861:868 | No text annotation Not in a motif group | geometric HL_7A0S_056 HL_84085.2 | |
| HL_4V5B_189 | 1/DA/897:902 | GNRA Not in a motif group | geometric HL_4V9F_048 HL_42097.1 | |
| HL_4V5B_190 | 1/DA/1009:1020 | No text annotation Not in a motif group | ||
| HL_4V5B_191 | 1/DA/1076:1081 | GNRA Not in a motif group | homologous HL_5J7L_023 HL_42097.1 | |
| HL_4V5B_192 | 1/DA/1089:1096 | No text annotation Not in a motif group | homologous HL_4LFB_025 HL_71554.2 | |
| HL_4V5B_193 | 1/DA/1134:1140 | No text annotation Not in a motif group | homologous HL_4LFB_026 HL_03562.2 | |
| HL_4V5B_194 | 1/DA/1165:1171 | No text annotation Not in a motif group | ||
| HL_4V5B_195 | 1/DA/1265:1270 | Other HL Not in a motif group | homologous HL_4LFB_028 HL_42097.1 | |
| HL_4V5B_196 | 1/DA/1313:1324 | No text annotation Not in a motif group | ||
| HL_4V5B_197 | 1/DA/1356:1366 | No text annotation Not in a motif group | homologous HL_5J7L_029 HL_96366.1 | |
| HL_4V5B_198 | 1/DA/1449:1454 | UNCG Not in a motif group | homologous HL_5J7L_030 HL_03562.2 | |
| HL_4V5B_199 | 1/DA/1515:1520 | No text annotation Not in a motif group | homologous HL_6CZR_103 NA |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_4V5B_027 | No text annotation | ||
| HL_4V5B_071 | No text annotation | ||
| HL_4V5B_074 | UNCG | ||
| HL_4V5B_081 | No text annotation | ||
| HL_4V5B_087 | No text annotation | ||
| HL_4V5B_095 | No text annotation | ||
| HL_4V5B_099 | No text annotation | ||
| HL_4V5B_126 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_4V5B_001 | 1/AA/17:18, 1/AA/65:67 | Major groove intercalation Not in a motif group | homologous IL_5J7L_355 IL_37497.2 | |
| IL_4V5B_002 | 1/AA/23:28, 1/AA/56:60 | No text annotation Not in a motif group | homologous IL_7A0S_103 IL_18472.2 | |
| IL_4V5B_003 | 1/AA/30:33, 1/AA/49:54 | No text annotation Not in a motif group | ||
| IL_4V5B_004 | 1/AA/71:79, 1/AA/97:105 | Bacterial 5S Loop E Not in a motif group | homologous IL_5J7L_359 IL_56455.3 | |
| IL_4V5B_005 | 1/AB/24:30, 1/AB/510:516 | Triple sheared with non-canonical cWW Not in a motif group | homologous IL_5J7L_245 IL_66414.6 | |
| IL_4V5B_006 | 1/AB/36:37, 1/AB/442:444 | Single bulged A Not in a motif group | homologous IL_7A0S_002 IL_37497.2 | |
| IL_4V5B_007 | 1/AB/43:44, 1/AB/434:436 | Minor groove platform Not in a motif group | homologous IL_5J7L_247 IL_42622.2 | |
| IL_4V5B_008 | 1/AB/81:85, 1/AB/97:105 | No text annotation Not in a motif group | ||
| IL_4V5B_009 | 1/AB/183:184, 1/AB/212:214 | Single stack bend Not in a motif group | homologous IL_7A0S_005 IL_76488.2 | |
| IL_4V5B_010 | 1/AB/274:281, 1/AB/359:363 | No text annotation Not in a motif group | homologous IL_5J7L_253 IL_77870.1 | |
| IL_4V5B_011 | 1/AB/292:296, 1/AB/342:348 | No text annotation Not in a motif group | ||
| IL_4V5B_012 | 1/AB/535:539, 1/AB/554:558 | Triple sheared Not in a motif group | geometric IL_5J7L_274 IL_56467.8 | |
| IL_4V5B_013 | 1/AB/564:566, 1/AB/575:577 | No text annotation Not in a motif group | geometric IL_4WF9_017 IL_95997.1 | |
| IL_4V5B_014 | 1/AB/605:611, 1/AB/617:623 | No text annotation Not in a motif group | ||
| IL_4V5B_015 | 1/AB/672:674, 1/AB/806:808 | No text annotation Not in a motif group | geometric IL_4WF9_020 IL_95997.1 | |
| IL_4V5B_016 | 1/AB/674:678, 1/AB/799:806 | tHW-tHW cross-strand stack Not in a motif group | homologous IL_5J7L_260 IL_17470.6 | |
| IL_4V5B_017 | 1/AB/697:698, 1/AB/763:765 | Single bulged A Not in a motif group | geometric IL_7RQB_019 IL_37497.2 | |
| IL_4V5B_018 | 1/AB/702:703, 1/AB/728:730 | Single bulged G Not in a motif group | geometric IL_4WF9_023 IL_00225.2 | |
| IL_4V5B_019 | 1/AB/703:707, 1/AB/724:728 | Triple sheared Not in a motif group | homologous IL_7RQB_021 IL_56467.8 | |
| IL_4V5B_020 | 1/AB/738:740, 1/AB/757:758 | Major groove platform Not in a motif group | homologous IL_5J7L_264 IL_27635.1 | |
| IL_4V5B_021 | 1/AB/775:777, 1/AB/787:791 | No text annotation Not in a motif group | ||
| IL_4V5B_022 | 1/AB/837:838, 1/AB/940:942 | Single stack bend Not in a motif group | homologous IL_7A0S_022 IL_92001.1 | |
| IL_4V5B_023 | 1/AB/844:848, 1/AB/930:934 | No text annotation Not in a motif group | ||
| IL_4V5B_024 | 1/AB/850:851, 1/AB/926:928 | Single stack bend Not in a motif group | homologous IL_5J7L_269 IL_76488.2 | |
| IL_4V5B_025 | 1/AB/855:857, 1/AB/921:922 | Single stack bend Not in a motif group | geometric IL_4C7O_002 IL_76488.2 | |
| IL_4V5B_026 | 1/AB/857:862, 1/AB/915:921 | No text annotation Not in a motif group | ||
| IL_4V5B_027 | 1/AB/862:863, 1/AB/913:915 | No text annotation Not in a motif group | ||
| IL_4V5B_028 | 1/AB/863:869, 1/AB/908:913 | No text annotation Not in a motif group | ||
| IL_4V5B_029 | 1/AB/869:872, 1/AB/905:908 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_4EYA_008 IL_30621.2 | |
| IL_4V5B_030 | 1/AB/993:996, 1/AB/1159:1161 | Isolated non-canonical cWW with bulges Not in a motif group | geometric IL_1U6B_001 IL_82068.2 | |
| IL_4V5B_031 | 1/AB/998:1002, 1/AB/1153:1157 | UAA/GAN Not in a motif group | homologous IL_4WF9_036 IL_89002.2 | |
| IL_4V5B_032 | 1/AB/1004:1011, 1/AB/1150:1151 | SSU/LSU pseudoknot Not in a motif group | geometric IL_5J7L_278 IL_15861.7 | |
| IL_4V5B_033 | 1/AB/1011:1013, 1/AB/1149:1150 | Single bulged U Not in a motif group | homologous IL_5J7L_279 IL_83039.13 | |
| IL_4V5B_034 | 1/AB/1018:1024, 1/AB/1140:1144 | No text annotation Not in a motif group | geometric IL_4WF9_039 IL_57188.3 | |
| IL_4V5B_035 | 1/AB/1024:1030, 1/AB/1124:1140 | No text annotation Not in a motif group | geometric IL_5J7L_281 IL_50715.1 | |
| IL_4V5B_036 | 1/AB/1031:1034, 1/AB/1121:1123 | Isolated non-canonical cWW with bulges Not in a motif group | homologous IL_4WF9_041 IL_82068.2 | |
| IL_4V5B_037 | 1/AB/1038:1042, 1/AB/1113:1117 | No text annotation Not in a motif group | geometric IL_5TBW_121 IL_05145.2 | |
| IL_4V5B_038 | 1/AB/1043:1053, 1/AB/1106:1112 | No text annotation Not in a motif group | ||
| IL_4V5B_039 | 1/AB/1055:1057, 1/AB/1081:1104 | No text annotation Not in a motif group | ||
| IL_4V5B_040 | 1/AB/1059:1062, 1/AB/1076:1079 | No text annotation Not in a motif group | homologous IL_6PRV_001 IL_23544.2 | |
| IL_4V5B_041 | 1/AB/1196:1199, 1/AB/1246:1250 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_3WBM_003 IL_30621.2 | |
| IL_4V5B_042 | 1/AB/1200:1206, 1/AB/1240:1245 | No text annotation Not in a motif group | ||
| IL_4V5B_043 | 1/AB/1208:1215, 1/AB/1234:1238 | Kink-turn Not in a motif group | homologous IL_7RQB_047 IL_70923.2 | |
| IL_4V5B_044 | 1/AB/1310:1313, 1/AB/1603:1604 | Major groove platform; stack outside cWW Not in a motif group | homologous IL_7RQB_050 IL_50694.2 | |
| IL_4V5B_045 | 1/AB/1319:1323, 1/AB/1331:1333 | C-loop Not in a motif group | homologous IL_5J7L_291 IL_63596.6 | |
| IL_4V5B_046 | 1/AB/1351:1356, 1/AB/1375:1380 | No text annotation Not in a motif group | ||
| IL_4V5B_047 | 1/AB/1357:1361, 1/AB/1370:1374 | tSH-tHW-tHS Not in a motif group | homologous IL_5J7L_293 IL_17136.1 | |
| IL_4V5B_048 | 1/AB/1415:1416, 1/AB/1582:1587 | No text annotation Not in a motif group | ||
| IL_4V5B_049 | 1/AB/1417:1421, 1/AB/1577:1581 | UAA/GAN Not in a motif group | homologous IL_5J7L_295 IL_89002.2 | |
| IL_4V5B_050 | 1/AB/1431:1435, 1/AB/1557:1562 | No text annotation Not in a motif group | ||
| IL_4V5B_051 | 1/AB/1437:1441, 1/AB/1550:1555 | No text annotation Not in a motif group | ||
| IL_4V5B_052 | 1/AB/1468:1471, 1/AB/1520:1524 | No text annotation Not in a motif group | ||
| IL_4V5B_053 | 1/AB/1474:1479, 1/AB/1512:1517 | No text annotation Not in a motif group | ||
| IL_4V5B_054 | 1/AB/1480:1482, 1/AB/1507:1511 | No text annotation Not in a motif group | ||
| IL_4V5B_055 | 1/AB/1489:1491, 1/AB/1499:1500 | Single bulged A Not in a motif group | homologous IL_5J7L_302 IL_37497.2 | |
| IL_4V5B_056 | 1/AB/1526:1529, 1/AB/1542:1546 | UAA/GAN variation Not in a motif group | homologous IL_5J7L_303 IL_07235.1 | |
| IL_4V5B_057 | 1/AB/1651:1656, 1/AB/2004:2006 | No text annotation Not in a motif group | homologous IL_5J7L_304 IL_12566.2 | |
| IL_4V5B_058 | 1/AB/1663:1665, 1/AB/1995:1997 | No text annotation Not in a motif group | ||
| IL_4V5B_059 | 1/AB/1666:1669, 1/AB/1993:1994 | Major groove platform; stack outside cWW Not in a motif group | geometric IL_4WF9_064 IL_50694.2 | |
| IL_4V5B_060 | 1/AB/1669:1674, 1/AB/1990:1993 | Intercalated tWH Not in a motif group | homologous IL_5J7L_307 IL_82842.2 | |
| IL_4V5B_061 | 1/AB/1686:1691, 1/AB/1696:1702 | tSH-tSH-tHH-tHS Not in a motif group | homologous IL_5J7L_308 IL_65969.2 | |
| IL_4V5B_062 | 1/AB/1712:1718, 1/AB/1742:1746 | 6x5 Sarcin-Ricin; G-bulge Not in a motif group | homologous IL_5J7L_309 IL_88269.3 | |
| IL_4V5B_063 | 1/AB/1720:1726, 1/AB/1734:1740 | No text annotation Not in a motif group | ||
| IL_4V5B_064 | 1/AB/1727:1728, 1/AB/1731:1733 | Single bulged C Not in a motif group | homologous IL_5J7L_311 IL_61258.12 | |
| IL_4V5B_065 | 1/AB/1770:1772, 1/AB/1979:1982 | No text annotation Not in a motif group | geometric IL_3MEI_002 IL_95997.1 | |
| IL_4V5B_066 | 1/AB/1798:1804, 1/AB/1813:1821 | Kink-turn related Not in a motif group | homologous IL_5J7L_313 IL_17069.3 | |
| IL_4V5B_067 | 1/AB/1837:1840, 1/AB/1902:1903 | Major groove outside cWW, minor groove, intercalation pocket Not in a motif group | homologous IL_5J7L_314 IL_88739.1 | |
| IL_4V5B_068 | 1/AB/1841:1842, 1/AB/1898:1901 | Major groove outside cWW, minor groove, intercalation pocket Not in a motif group | homologous IL_4WF9_071 IL_69996.1 | |
| IL_4V5B_069 | 1/AB/1846:1849, 1/AB/1893:1894 | Minor groove platform Not in a motif group | homologous IL_7RQB_073 IL_88739.1 | |
| IL_4V5B_070 | 1/AB/1864:1867, 1/AB/1874:1878 | UAA/GAN related Not in a motif group | homologous IL_5J7L_317 IL_77691.1 | |
| IL_4V5B_071 | 1/AB/1933:1945, 1/AB/1961:1967 | No text annotation Not in a motif group | ||
| IL_4V5B_072 | 1/AB/2050:2052, 1/AB/2617:2618 | Major groove platform Not in a motif group | homologous IL_4WF9_078 IL_27635.1 | |
| IL_4V5B_073 | 1/AB/2054:2056, 1/AB/2612:2615 | No text annotation Not in a motif group | ||
| IL_4V5B_074 | 1/AB/2067:2070, 1/AB/2441:2443 | No text annotation Not in a motif group | geometric IL_1Y27_001 IL_51629.2 | |
| IL_4V5B_075 | 1/AB/2070:2071, 1/AB/2438:2441 | Minor groove platform Not in a motif group | homologous IL_7RQB_081 IL_42622.2 | |
| IL_4V5B_076 | 1/AB/2081:2083, 1/AB/2236:2239 | Isolated tHS basepair with bulges Not in a motif group | homologous IL_5J7L_325 IL_38958.7 | |
| IL_4V5B_077 | 1/AB/2085:2087, 1/AB/2232:2234 | No text annotation Not in a motif group | homologous IL_7RQB_083 IL_95997.1 | |
| IL_4V5B_078 | 1/AB/2103:2106, 1/AB/2183:2186 | No text annotation Not in a motif group | ||
| IL_4V5B_080 | 1/AB/2201:2204, 1/AB/2220:2222 | Decoding loop related Not in a motif group | geometric IL_3C3Z_002 IL_64417.1 | |
| IL_4V5B_081 | 1/AB/2350:2353, 1/AB/2364:2367 | Double sheared Not in a motif group | homologous IL_4WF9_087 IL_09705.9 | |
| IL_4V5B_082 | 1/AB/2401:2403, 1/AB/2414:2415 | No text annotation Not in a motif group | ||
| IL_4V5B_083 | 1/AB/2456:2459, 1/AB/2493:2495 | Isolated non-canonical cWW with bulges Not in a motif group | geometric IL_1U6B_001 IL_82068.2 | |
| IL_4V5B_084 | 1/AB/2459:2462, 1/AB/2488:2493 | No text annotation Not in a motif group | ||
| IL_4V5B_085 | 1/AB/2466:2470, 1/AB/2480:2484 | Triple sheared Not in a motif group | homologous IL_5J7L_338 IL_56467.8 | |
| IL_4V5B_086 | 1/AB/2507:2508, 1/AB/2580:2582 | Major groove platform Not in a motif group | homologous IL_4WF9_094 IL_76223.2 | |
| IL_4V5B_087 | 1/AB/2510:2512, 1/AB/2574:2578 | Isolated non-canonical cWW with bulges Not in a motif group | geometric IL_7RQB_097 IL_90933.2 | |
| IL_4V5B_088 | 1/AB/2512:2513, 1/AB/2571:2574 | No text annotation Not in a motif group | homologous IL_5J7L_341 IL_71530.2 | |
| IL_4V5B_089 | 1/AB/2522:2523, 1/AB/2540:2543 | Minor groove platform with intercalation Not in a motif group | homologous IL_5J7L_342 IL_95601.3 | |
| IL_4V5B_090 | 1/AB/2591:2592, 1/AB/2601:2603 | Single bulged A Not in a motif group | homologous IL_5J7L_344 IL_37497.2 | |
| IL_4V5B_091 | 1/AB/2636:2641, 1/AB/2773:2782 | No text annotation Not in a motif group | ||
| IL_4V5B_092 | 1/AB/2652:2658, 1/AB/2663:2668 | Sarcin-Ricin target in LSU H95; G-bulge Not in a motif group | geometric IL_7RQB_103 IL_16458.1 | |
| IL_4V5B_093 | 1/AB/2680:2684, 1/AB/2725:2727 | C-loop Not in a motif group | homologous IL_5J7L_347 IL_63596.6 | |
| IL_4V5B_094 | 1/AB/2687:2693, 1/AB/2716:2722 | No text annotation Not in a motif group | ||
| IL_4V5B_095 | 1/AB/2694:2696, 1/AB/2711:2715 | Isolated cWS basepair Not in a motif group | geometric IL_4TS2_003 IL_52767.2 | |
| IL_4V5B_096 | 1/AB/2737:2744, 1/AB/2760:2767 | No text annotation Not in a motif group | ||
| IL_4V5B_097 | 1/AB/2806:2811, 1/AB/2889:2892 | No text annotation Not in a motif group | geometric IL_5J7L_351 IL_49460.2 | |
| IL_4V5B_098 | 1/AB/2838:2839, 1/AB/2878:2880 | Major groove intercalation Not in a motif group | homologous IL_5J7L_352 IL_16396.2 | |
| IL_4V5B_099 | 1/AB/2843:2846, 1/AB/2870:2874 | Multiple bulged bases with non-canonical cWW Not in a motif group | homologous IL_5J7L_353 IL_58764.3 | |
| IL_4V5B_100 | 1/AB/2847:2852, 1/AB/2865:2869 | No text annotation Not in a motif group | homologous IL_7A0S_101 IL_83162.5 | |
| IL_4V5B_101 | 1/BA/30:33, 1/BA/551:553 | No text annotation Not in a motif group | geometric IL_5UNE_009 IL_53251.2 | |
| IL_4V5B_102 | 1/BA/44:45, 1/BA/396:398 | Single bulged A Not in a motif group | homologous IL_4LFB_002 IL_37497.2 | |
| IL_4V5B_103 | 1/BA/47:52, 1/BA/359:361 | No text annotation Not in a motif group | geometric IL_5J7L_003 IL_11178.1 | |
| IL_4V5B_104 | 1/BA/52:57, 1/BA/355:359 | No text annotation Not in a motif group | ||
| IL_4V5B_105 | 1/BA/63:66, 1/BA/103:104 | Multiple bulged bases Not in a motif group | homologous IL_6CZR_117 IL_76389.1 | |
| IL_4V5B_106 | 1/BA/67:69, 1/BA/99:102 | Minor groove platform with extra cWW Not in a motif group | geometric IL_5J7L_006 IL_65006.1 | |
| IL_4V5B_108 | 1/BA/75:76, 1/BA/93:95 | No text annotation Not in a motif group | ||
| IL_4V5B_109 | 1/BA/127:131, 1/BA/231:234 | No text annotation Not in a motif group | ||
| IL_4V5B_110 | 1/BA/132:136, 1/BA/227:230 | No text annotation Not in a motif group | homologous IL_4LFB_008 IL_58764.3 | |
| IL_4V5B_111 | 1/BA/144:146, 1/BA/176:178 | Isolated cWH basepair Not in a motif group | homologous IL_5J7L_011 IL_51629.2 | |
| IL_4V5B_112 | 1/BA/147:153, 1/BA/168:175 | tWH-tWH-tHW-tHW Not in a motif group | homologous IL_5J7L_012 IL_80604.2 | |
| IL_4V5B_114 | 1/BA/242:247, 1/BA/277:284 | Kink-turn with non-sequential stacking Not in a motif group | homologous IL_4LFB_011 IL_45067.2 | |
| IL_4V5B_115 | 1/BA/249:253, 1/BA/273:275 | No text annotation Not in a motif group | homologous IL_6CZR_124 IL_38684.1 | |
| IL_4V5B_116 | 1/BA/291:293, 1/BA/304:309 | No text annotation Not in a motif group | ||
| IL_4V5B_117 | 1/BA/370:375, 1/BA/389:391 | No text annotation Not in a motif group | ||
| IL_4V5B_118 | 1/BA/375:377, 1/BA/386:389 | Decoding loop related Not in a motif group | geometric IL_5Z1I_003 IL_64417.1 | |
| IL_4V5B_119 | 1/BA/407:416, 1/BA/427:435 | No text annotation Not in a motif group | ||
| IL_4V5B_121 | 1/BA/504:511, 1/BA/540:541 | SSU/LSU pseudoknot Not in a motif group | homologous IL_6CZR_132 IL_15861.7 | |
| IL_4V5B_122 | 1/BA/515:521, 1/BA/528:536 | No text annotation Not in a motif group | homologous IL_5J7L_025 NA | |
| IL_4V5B_123 | 1/BA/567:575, 1/BA/880:883 | No text annotation Not in a motif group | ||
| IL_4V5B_124 | 1/BA/580:584, 1/BA/757:761 | tSH-tHW-tHS Not in a motif group | homologous IL_5J7L_027 IL_17136.1 | |
| IL_4V5B_125 | 1/BA/594:596, 1/BA/644:645 | Major groove platform Not in a motif group | homologous IL_5J7L_028 IL_27635.1 | |
| IL_4V5B_126 | 1/BA/597:598, 1/BA/640:643 | Major groove minor groove platform; mini C-loop Not in a motif group | homologous IL_4LFB_025 IL_09061.6 | |
| IL_4V5B_127 | 1/BA/605:612, 1/BA/628:633 | No text annotation Not in a motif group | homologous IL_5J7L_030 IL_78349.1 | |
| IL_4V5B_128 | 1/BA/654:655, 1/BA/751:754 | Major groove platform; stack outside cWW Not in a motif group | homologous IL_5J7L_031 IL_50694.2 | |
| IL_4V5B_129 | 1/BA/658:660, 1/BA/745:748 | No text annotation Not in a motif group | geometric IL_4P3T_002 IL_46796.1 | |
| IL_4V5B_130 | 1/BA/661:667, 1/BA/739:744 | No text annotation Not in a motif group | ||
| IL_4V5B_131 | 1/BA/673:680, 1/BA/710:717 | No text annotation Not in a motif group | ||
| IL_4V5B_132 | 1/BA/774:779, 1/BA/803:805 | Other IL Not in a motif group | geometric IL_4V88_435 IL_22046.1 | |
| IL_4V5B_133 | 1/BA/779:783, 1/BA/799:803 | tSH-tHW-tHS Not in a motif group | geometric IL_4LFB_033 IL_17136.1 | |
| IL_4V5B_134 | 1/BA/887:894, 1/BA/905:910 | 8x6 Sarcin-Ricin with inserted Y; G-bulge Not in a motif group | homologous IL_5J7L_038 IL_24606.2 | |
| IL_4V5B_135 | 1/BA/922:924, 1/BA/1392:1395 | Isolated non-canonical cWW with bulges Not in a motif group | geometric IL_3TD0_002 IL_82068.2 | |
| IL_4V5B_136 | 1/BA/925:928, 1/BA/1389:1391 | No text annotation Not in a motif group | geometric IL_4WF9_083 IL_95997.1 | |
| IL_4V5B_137 | 1/BA/933:936, 1/BA/1379:1384 | No text annotation Not in a motif group | ||
| IL_4V5B_138 | 1/BA/993:997, 1/BA/1044:1045 | Minor groove platform Not in a motif group | homologous IL_4LFB_039 IL_47078.1 | |
| IL_4V5B_139 | 1/BA/997:1002, 1/BA/1038:1044 | No text annotation Not in a motif group | ||
| IL_4V5B_140 | 1/BA/1048:1050, 1/BA/1208:1209 | No text annotation Not in a motif group | ||
| IL_4V5B_141 | 1/BA/1051:1056, 1/BA/1204:1207 | No text annotation Not in a motif group | ||
| IL_4V5B_142 | 1/BA/1056:1059, 1/BA/1198:1204 | No text annotation Not in a motif group | ||
| IL_4V5B_143 | 1/BA/1073:1087, 1/BA/1098:1102 | No text annotation Not in a motif group | ||
| IL_4V5B_144 | 1/BA/1124:1128, 1/BA/1144:1149 | No text annotation Not in a motif group | homologous IL_5J7L_051 IL_93211.1 | |
| IL_4V5B_145 | 1/BA/1129:1133, 1/BA/1141:1143 | No text annotation Not in a motif group | ||
| IL_4V5B_146 | 1/BA/1158:1162, 1/BA/1174:1181 | No text annotation Not in a motif group | ||
| IL_4V5B_147 | 1/BA/1247:1253, 1/BA/1284:1290 | No text annotation Not in a motif group | homologous IL_5J7L_054 IL_09129.1 | |
| IL_4V5B_148 | 1/BA/1255:1258, 1/BA/1277:1282 | No text annotation Not in a motif group | ||
| IL_4V5B_149 | 1/BA/1259:1263, 1/BA/1272:1276 | Triple sheared Not in a motif group | homologous IL_5J7L_056 IL_56467.8 | |
| IL_4V5B_150 | 1/BA/1303:1309, 1/BA/1328:1334 | No text annotation Not in a motif group | ||
| IL_4V5B_151 | 1/BA/1401:1405, 1/BA/1496:1501 | No text annotation Not in a motif group | ||
| IL_4V5B_152 | 1/BA/1405:1407, 1/BA/1494:1496 | No text annotation Not in a motif group | geometric IL_4V88_417 IL_95997.1 | |
| IL_4V5B_153 | 1/BA/1407:1409, 1/BA/1491:1494 | No text annotation Not in a motif group | ||
| IL_4V5B_154 | 1/BA/1410:1414, 1/BA/1486:1490 | No text annotation Not in a motif group | geometric IL_5TBW_121 IL_05145.2 | |
| IL_4V5B_155 | 1/BA/1415:1421, 1/BA/1479:1485 | No text annotation Not in a motif group | ||
| IL_4V5B_156 | 1/BA/1429:1436, 1/BA/1465:1471 | No text annotation Not in a motif group | ||
| IL_4V5B_158 | 1/CA/17:18, 1/CA/65:67 | Major groove intercalation Not in a motif group | homologous IL_5J7L_355 IL_37497.2 | |
| IL_4V5B_159 | 1/CB/24:30, 1/CB/510:516 | Triple sheared with non-canonical cWW Not in a motif group | homologous IL_5J7L_245 IL_66414.6 | |
| IL_4V5B_160 | 1/CB/36:37, 1/CB/442:444 | Single bulged A Not in a motif group | homologous IL_7A0S_002 IL_37497.2 | |
| IL_4V5B_161 | 1/CB/43:44, 1/CB/434:436 | Minor groove platform Not in a motif group | homologous IL_5J7L_247 IL_42622.2 | |
| IL_4V5B_162 | 1/CB/75:76, 1/CB/110:112 | Single stack bend Not in a motif group | geometric IL_5TBW_009 IL_76488.2 | |
| IL_4V5B_163 | 1/CB/80:85, 1/CB/97:106 | No text annotation Not in a motif group | ||
| IL_4V5B_164 | 1/CB/183:184, 1/CB/212:214 | Single stack bend Not in a motif group | homologous IL_7A0S_005 IL_76488.2 | |
| IL_4V5B_165 | 1/CB/269:272, 1/CB/365:370 | No text annotation Not in a motif group | ||
| IL_4V5B_166 | 1/CB/273:281, 1/CB/359:364 | No text annotation Not in a motif group | ||
| IL_4V5B_167 | 1/CB/292:295, 1/CB/343:348 | No text annotation Not in a motif group | homologous IL_7A0S_008 IL_07235.1 | |
| IL_4V5B_168 | 1/CB/536:539, 1/CB/554:557 | Double sheared Not in a motif group | homologous IL_5J7L_256 IL_09705.9 | |
| IL_4V5B_169 | 1/CB/605:611, 1/CB/617:623 | No text annotation Not in a motif group | ||
| IL_4V5B_170 | 1/CB/672:674, 1/CB/806:808 | No text annotation Not in a motif group | homologous IL_4WF9_020 IL_95997.1 | |
| IL_4V5B_171 | 1/CB/674:678, 1/CB/799:806 | tHW-tHW cross-strand stack Not in a motif group | geometric IL_5J7L_260 IL_17470.6 | |
| IL_4V5B_172 | 1/CB/697:698, 1/CB/763:765 | Single bulged A Not in a motif group | homologous IL_7RQB_019 IL_37497.2 | |
| IL_4V5B_173 | 1/CB/702:703, 1/CB/728:730 | Single bulged G Not in a motif group | homologous IL_4WF9_023 IL_00225.2 | |
| IL_4V5B_174 | 1/CB/703:707, 1/CB/724:728 | Triple sheared Not in a motif group | geometric IL_7RQB_021 IL_56467.8 | |
| IL_4V5B_175 | 1/CB/738:740, 1/CB/757:758 | Major groove platform Not in a motif group | homologous IL_5J7L_264 IL_27635.1 | |
| IL_4V5B_176 | 1/CB/775:777, 1/CB/787:791 | No text annotation Not in a motif group | ||
| IL_4V5B_177 | 1/CB/837:838, 1/CB/940:942 | Single stack bend Not in a motif group | homologous IL_7A0S_022 IL_92001.1 | |
| IL_4V5B_178 | 1/CB/844:848, 1/CB/930:934 | No text annotation Not in a motif group | ||
| IL_4V5B_179 | 1/CB/850:851, 1/CB/926:928 | Single stack bend Not in a motif group | homologous IL_5J7L_269 IL_76488.2 | |
| IL_4V5B_180 | 1/CB/855:857, 1/CB/921:922 | Single stack bend Not in a motif group | geometric IL_4C7O_002 IL_76488.2 | |
| IL_4V5B_181 | 1/CB/857:863, 1/CB/913:921 | No text annotation Not in a motif group | ||
| IL_4V5B_182 | 1/CB/864:869, 1/CB/908:912 | No text annotation Not in a motif group | ||
| IL_4V5B_183 | 1/CB/870:874, 1/CB/903:907 | No text annotation Not in a motif group | ||
| IL_4V5B_184 | 1/CB/993:996, 1/CB/1159:1161 | Isolated non-canonical cWW with bulges Not in a motif group | geometric IL_5ML7_010 IL_82068.2 | |
| IL_4V5B_185 | 1/CB/998:1002, 1/CB/1153:1157 | UAA/GAN Not in a motif group | homologous IL_5J7L_277 IL_89002.2 | |
| IL_4V5B_186 | 1/CB/1004:1011, 1/CB/1150:1151 | SSU/LSU pseudoknot Not in a motif group | geometric IL_5J7L_278 IL_15861.7 | |
| IL_4V5B_187 | 1/CB/1011:1013, 1/CB/1149:1150 | Single bulged U Not in a motif group | homologous IL_5J7L_279 IL_83039.13 | |
| IL_4V5B_188 | 1/CB/1018:1024, 1/CB/1140:1144 | No text annotation Not in a motif group | geometric IL_4WF9_039 IL_57188.3 | |
| IL_4V5B_189 | 1/CB/1024:1034, 1/CB/1121:1140 | No text annotation Not in a motif group | ||
| IL_4V5B_190 | 1/CB/1038:1041, 1/CB/1114:1117 | Tandem non-canonical cWW pairs Not in a motif group | homologous IL_5J7L_283 IL_30621.2 | |
| IL_4V5B_191 | 1/CB/1043:1053, 1/CB/1106:1112 | No text annotation Not in a motif group | ||
| IL_4V5B_192 | 1/CB/1196:1199, 1/CB/1246:1250 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_3WBM_003 IL_30621.2 | |
| IL_4V5B_193 | 1/CB/1200:1206, 1/CB/1240:1245 | No text annotation Not in a motif group | ||
| IL_4V5B_194 | 1/CB/1208:1215, 1/CB/1234:1238 | Kink-turn Not in a motif group | homologous IL_7RQB_047 IL_70923.2 | |
| IL_4V5B_195 | 1/CB/1310:1313, 1/CB/1603:1604 | Major groove platform; stack outside cWW Not in a motif group | homologous IL_7RQB_050 IL_50694.2 | |
| IL_4V5B_196 | 1/CB/1319:1323, 1/CB/1331:1333 | C-loop Not in a motif group | homologous IL_5J7L_291 IL_63596.6 | |
| IL_4V5B_197 | 1/CB/1351:1356, 1/CB/1375:1380 | No text annotation Not in a motif group | ||
| IL_4V5B_198 | 1/CB/1357:1361, 1/CB/1370:1374 | tSH-tHW-tHS Not in a motif group | homologous IL_5J7L_293 IL_17136.1 | |
| IL_4V5B_199 | 1/CB/1415:1416, 1/CB/1582:1587 | No text annotation Not in a motif group | ||
| IL_4V5B_200 | 1/CB/1417:1421, 1/CB/1577:1581 | UAA/GAN Not in a motif group | homologous IL_5J7L_295 IL_89002.2 | |
| IL_4V5B_201 | 1/CB/1431:1435, 1/CB/1557:1562 | No text annotation Not in a motif group | ||
| IL_4V5B_202 | 1/CB/1437:1441, 1/CB/1550:1555 | No text annotation Not in a motif group | ||
| IL_4V5B_203 | 1/CB/1468:1471, 1/CB/1520:1524 | No text annotation Not in a motif group | ||
| IL_4V5B_204 | 1/CB/1474:1479, 1/CB/1512:1517 | No text annotation Not in a motif group | ||
| IL_4V5B_205 | 1/CB/1480:1482, 1/CB/1507:1511 | No text annotation Not in a motif group | ||
| IL_4V5B_206 | 1/CB/1489:1491, 1/CB/1499:1500 | Single bulged A Not in a motif group | homologous IL_5J7L_302 IL_37497.2 | |
| IL_4V5B_207 | 1/CB/1526:1529, 1/CB/1542:1546 | UAA/GAN variation Not in a motif group | homologous IL_5J7L_303 IL_07235.1 | |
| IL_4V5B_208 | 1/CB/1651:1656, 1/CB/2004:2006 | No text annotation Not in a motif group | homologous IL_5J7L_304 IL_12566.2 | |
| IL_4V5B_209 | 1/CB/1663:1665, 1/CB/1995:1997 | Isolated tWW turn Not in a motif group | homologous IL_5J7L_305 IL_54997.7 | |
| IL_4V5B_210 | 1/CB/1666:1669, 1/CB/1993:1994 | Major groove platform; stack outside cWW Not in a motif group | homologous IL_4WF9_064 IL_50694.2 | |
| IL_4V5B_211 | 1/CB/1669:1674, 1/CB/1990:1993 | Intercalated tWH Not in a motif group | geometric IL_5J7L_307 IL_82842.2 | |
| IL_4V5B_212 | 1/CB/1686:1691, 1/CB/1696:1702 | tSH-tSH-tHH-tHS Not in a motif group | homologous IL_5J7L_308 IL_65969.2 | |
| IL_4V5B_213 | 1/CB/1712:1718, 1/CB/1742:1746 | 6x5 Sarcin-Ricin; G-bulge Not in a motif group | homologous IL_5J7L_309 IL_88269.3 | |
| IL_4V5B_214 | 1/CB/1720:1726, 1/CB/1734:1740 | No text annotation Not in a motif group | ||
| IL_4V5B_215 | 1/CB/1727:1728, 1/CB/1731:1733 | Single bulged C Not in a motif group | geometric IL_5J7L_311 IL_61258.12 | |
| IL_4V5B_216 | 1/CB/1770:1772, 1/CB/1979:1982 | No text annotation Not in a motif group | geometric IL_3MEI_002 IL_95997.1 | |
| IL_4V5B_217 | 1/CB/1798:1804, 1/CB/1813:1821 | Kink-turn related Not in a motif group | homologous IL_5J7L_313 IL_17069.3 | |
| IL_4V5B_218 | 1/CB/1837:1840, 1/CB/1902:1903 | Major groove outside cWW, minor groove, intercalation pocket Not in a motif group | homologous IL_5J7L_314 IL_88739.1 | |
| IL_4V5B_219 | 1/CB/1841:1842, 1/CB/1898:1901 | Major groove outside cWW, minor groove, intercalation pocket Not in a motif group | homologous IL_4WF9_071 IL_69996.1 | |
| IL_4V5B_220 | 1/CB/1846:1849, 1/CB/1893:1894 | Minor groove platform Not in a motif group | homologous IL_7RQB_073 IL_88739.1 | |
| IL_4V5B_221 | 1/CB/1864:1867, 1/CB/1874:1878 | UAA/GAN related Not in a motif group | homologous IL_5J7L_317 IL_77691.1 | |
| IL_4V5B_222 | 1/CB/1933:1945, 1/CB/1961:1967 | No text annotation Not in a motif group | ||
| IL_4V5B_223 | 1/CB/2050:2052, 1/CB/2617:2618 | Major groove platform Not in a motif group | homologous IL_4WF9_078 IL_27635.1 | |
| IL_4V5B_224 | 1/CB/2054:2056, 1/CB/2612:2615 | No text annotation Not in a motif group | ||
| IL_4V5B_225 | 1/CB/2067:2070, 1/CB/2441:2443 | No text annotation Not in a motif group | geometric IL_1Y27_001 IL_51629.2 | |
| IL_4V5B_226 | 1/CB/2070:2071, 1/CB/2438:2441 | Minor groove platform Not in a motif group | geometric IL_7RQB_081 IL_42622.2 | |
| IL_4V5B_227 | 1/CB/2081:2083, 1/CB/2236:2239 | Isolated tHS basepair with bulges Not in a motif group | homologous IL_5J7L_325 IL_38958.7 | |
| IL_4V5B_228 | 1/CB/2085:2087, 1/CB/2232:2234 | No text annotation Not in a motif group | homologous IL_7RQB_083 IL_95997.1 | |
| IL_4V5B_229 | 1/CB/2103:2106, 1/CB/2183:2186 | No text annotation Not in a motif group | ||
| IL_4V5B_231 | 1/CB/2201:2204, 1/CB/2220:2222 | Decoding loop related Not in a motif group | geometric IL_3C3Z_002 IL_64417.1 | |
| IL_4V5B_232 | 1/CB/2350:2353, 1/CB/2364:2367 | Double sheared Not in a motif group | homologous IL_4WF9_087 IL_09705.9 | |
| IL_4V5B_233 | 1/CB/2400:2403, 1/CB/2414:2416 | No text annotation Not in a motif group | ||
| IL_4V5B_234 | 1/CB/2456:2459, 1/CB/2493:2495 | Isolated non-canonical cWW with bulges Not in a motif group | geometric IL_1U6B_001 IL_82068.2 | |
| IL_4V5B_235 | 1/CB/2459:2462, 1/CB/2488:2493 | No text annotation Not in a motif group | ||
| IL_4V5B_236 | 1/CB/2466:2470, 1/CB/2480:2484 | Triple sheared Not in a motif group | homologous IL_5J7L_338 IL_56467.8 | |
| IL_4V5B_237 | 1/CB/2507:2508, 1/CB/2580:2582 | Major groove platform Not in a motif group | homologous IL_4WF9_094 IL_76223.2 | |
| IL_4V5B_238 | 1/CB/2510:2512, 1/CB/2574:2578 | Isolated non-canonical cWW with bulges Not in a motif group | geometric IL_7RQB_097 IL_90933.2 | |
| IL_4V5B_239 | 1/CB/2512:2513, 1/CB/2571:2574 | No text annotation Not in a motif group | homologous IL_5J7L_341 IL_71530.2 | |
| IL_4V5B_240 | 1/CB/2522:2523, 1/CB/2540:2543 | Minor groove platform with intercalation Not in a motif group | homologous IL_5J7L_342 IL_95601.3 | |
| IL_4V5B_241 | 1/CB/2591:2592, 1/CB/2601:2603 | Single bulged A Not in a motif group | homologous IL_5J7L_344 IL_37497.2 | |
| IL_4V5B_242 | 1/CB/2636:2640, 1/CB/2774:2782 | No text annotation Not in a motif group | ||
| IL_4V5B_243 | 1/CB/2652:2658, 1/CB/2663:2668 | Sarcin-Ricin target in LSU H95; G-bulge Not in a motif group | geometric IL_7RQB_103 IL_16458.1 | |
| IL_4V5B_244 | 1/CB/2680:2684, 1/CB/2725:2727 | C-loop Not in a motif group | homologous IL_5J7L_347 IL_63596.6 | |
| IL_4V5B_245 | 1/CB/2687:2693, 1/CB/2716:2722 | No text annotation Not in a motif group | ||
| IL_4V5B_246 | 1/CB/2694:2696, 1/CB/2711:2715 | Isolated cWS basepair Not in a motif group | geometric IL_4TS2_003 IL_52767.2 | |
| IL_4V5B_247 | 1/CB/2737:2742, 1/CB/2762:2767 | No text annotation Not in a motif group | ||
| IL_4V5B_248 | 1/CB/2806:2811, 1/CB/2889:2892 | No text annotation Not in a motif group | geometric IL_5J7L_351 IL_49460.2 | |
| IL_4V5B_249 | 1/CB/2838:2839, 1/CB/2878:2880 | Major groove intercalation Not in a motif group | homologous IL_5J7L_352 IL_16396.2 | |
| IL_4V5B_250 | 1/CB/2843:2846, 1/CB/2870:2874 | Multiple bulged bases with non-canonical cWW Not in a motif group | homologous IL_5J7L_353 IL_58764.3 | |
| IL_4V5B_251 | 1/CB/2847:2852, 1/CB/2865:2869 | No text annotation Not in a motif group | homologous IL_7A0S_101 IL_83162.5 | |
| IL_4V5B_252 | 1/DA/30:32, 1/DA/552:553 | Single bulged G Not in a motif group | homologous IL_6CZR_113 IL_00225.2 | |
| IL_4V5B_253 | 1/DA/47:52, 1/DA/359:361 | No text annotation Not in a motif group | geometric IL_5J7L_003 IL_11178.1 | |
| IL_4V5B_254 | 1/DA/52:57, 1/DA/355:359 | No text annotation Not in a motif group | ||
| IL_4V5B_255 | 1/DA/63:66, 1/DA/103:104 | Multiple bulged bases Not in a motif group | homologous IL_6CZR_117 IL_76389.1 | |
| IL_4V5B_256 | 1/DA/67:69, 1/DA/99:102 | Minor groove platform with extra cWW Not in a motif group | geometric IL_5J7L_006 IL_65006.1 | |
| IL_4V5B_257 | 1/DA/69:73, 1/DA/97:99 | No text annotation Not in a motif group | ||
| IL_4V5B_258 | 1/DA/75:76, 1/DA/93:95 | No text annotation Not in a motif group | ||
| IL_4V5B_259 | 1/DA/127:131, 1/DA/231:234 | No text annotation Not in a motif group | ||
| IL_4V5B_260 | 1/DA/132:136, 1/DA/227:230 | No text annotation Not in a motif group | homologous IL_4LFB_008 IL_58764.3 | |
| IL_4V5B_261 | 1/DA/144:146, 1/DA/176:178 | Isolated cWH basepair Not in a motif group | homologous IL_5J7L_011 IL_51629.2 | |
| IL_4V5B_262 | 1/DA/147:153, 1/DA/168:175 | tWH-tWH-tHW-tHW Not in a motif group | homologous IL_5J7L_012 IL_80604.2 | |
| IL_4V5B_263 | 1/DA/203:207, 1/DA/212:214 | No text annotation Not in a motif group | homologous IL_5J7L_013 IL_33912.1 | |
| IL_4V5B_264 | 1/DA/242:247, 1/DA/277:284 | Kink-turn with non-sequential stacking Not in a motif group | homologous IL_4LFB_011 IL_45067.2 | |
| IL_4V5B_265 | 1/DA/249:253, 1/DA/273:275 | No text annotation Not in a motif group | homologous IL_6CZR_124 IL_38684.1 | |
| IL_4V5B_266 | 1/DA/291:293, 1/DA/304:309 | No text annotation Not in a motif group | ||
| IL_4V5B_267 | 1/DA/370:375, 1/DA/389:391 | No text annotation Not in a motif group | geometric IL_4WF9_114 IL_10810.1 | |
| IL_4V5B_268 | 1/DA/375:377, 1/DA/386:389 | Decoding loop related Not in a motif group | geometric IL_5Z1I_003 IL_64417.1 | |
| IL_4V5B_269 | 1/DA/406:409, 1/DA/433:436 | No text annotation Not in a motif group | ||
| IL_4V5B_270 | 1/DA/409:416, 1/DA/427:433 | No text annotation Not in a motif group | ||
| IL_4V5B_271 | 1/DA/440:442, 1/DA/492:497 | No text annotation Not in a motif group | homologous IL_5J7L_021 IL_22248.1 | |
| IL_4V5B_272 | 1/DA/446:454, 1/DA/479:488 | No text annotation Not in a motif group | ||
| IL_4V5B_273 | 1/DA/454:455, 1/DA/477:479 | Single stack bend Not in a motif group | geometric IL_4LFB_041 IL_76488.2 | |
| IL_4V5B_274 | 1/DA/457:459, 1/DA/472:475 | No text annotation Not in a motif group | ||
| IL_4V5B_275 | 1/DA/504:511, 1/DA/540:541 | No text annotation Not in a motif group | ||
| IL_4V5B_276 | 1/DA/515:521, 1/DA/528:536 | No text annotation Not in a motif group | ||
| IL_4V5B_277 | 1/DA/569:575, 1/DA/880:881 | No text annotation Not in a motif group | homologous IL_6CZR_134 IL_69996.1 | |
| IL_4V5B_278 | 1/DA/594:596, 1/DA/644:645 | Major groove platform Not in a motif group | homologous IL_5J7L_028 IL_27635.1 | |
| IL_4V5B_279 | 1/DA/597:599, 1/DA/639:643 | No text annotation Not in a motif group | geometric IL_4WF9_114 IL_10810.1 | |
| IL_4V5B_280 | 1/DA/605:612, 1/DA/628:633 | No text annotation Not in a motif group | homologous IL_5J7L_030 IL_78349.1 | |
| IL_4V5B_281 | 1/DA/654:656, 1/DA/750:754 | Major groove platform with extra pair Not in a motif group | geometric IL_7RQB_093 IL_63450.2 | |
| IL_4V5B_282 | 1/DA/657:659, 1/DA/746:749 | No text annotation Not in a motif group | ||
| IL_4V5B_283 | 1/DA/662:666, 1/DA/740:743 | Tandem non-canonical cWW pairs Not in a motif group | homologous IL_5J7L_033 IL_71110.1 | |
| IL_4V5B_284 | 1/DA/773:779, 1/DA/803:806 | No text annotation Not in a motif group | ||
| IL_4V5B_285 | 1/DA/779:783, 1/DA/799:803 | No text annotation Not in a motif group | ||
| IL_4V5B_286 | 1/DA/887:897, 1/DA/902:910 | No text annotation Not in a motif group | ||
| IL_4V5B_287 | 1/DA/921:924, 1/DA/1392:1396 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_4V88_429 IL_30621.2 | |
| IL_4V5B_288 | 1/DA/925:927, 1/DA/1390:1391 | Single bulged G Not in a motif group | homologous IL_4LFB_036 IL_00225.2 | |
| IL_4V5B_289 | 1/DA/933:936, 1/DA/1379:1384 | No text annotation Not in a motif group | geometric IL_6CZR_149 IL_93211.1 | |
| IL_4V5B_290 | 1/DA/951:984, 1/DA/1221:1230 | No text annotation Not in a motif group | ||
| IL_4V5B_291 | 1/DA/993:1000, 1/DA/1040:1045 | No text annotation Not in a motif group | ||
| IL_4V5B_292 | 1/DA/1003:1006, 1/DA/1023:1037 | No text annotation Not in a motif group | ||
| IL_4V5B_293 | 1/DA/1047:1050, 1/DA/1208:1210 | No text annotation Not in a motif group | geometric IL_7A0S_031 IL_95997.1 | |
| IL_4V5B_294 | 1/DA/1051:1056, 1/DA/1204:1207 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_4V88_473 IL_30621.2 | |
| IL_4V5B_295 | 1/DA/1057:1058, 1/DA/1199:1203 | Minor groove platform Not in a motif group | homologous IL_4LFB_045 IL_93353.1 | |
| IL_4V5B_296 | 1/DA/1058:1061, 1/DA/1195:1199 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_4EYA_008 IL_30621.2 | |
| IL_4V5B_297 | 1/DA/1061:1063, 1/DA/1193:1195 | No text annotation Not in a motif group | geometric IL_5J7L_050 IL_95997.1 | |
| IL_4V5B_298 | 1/DA/1124:1128, 1/DA/1144:1149 | No text annotation Not in a motif group | homologous IL_5J7L_051 IL_93211.1 | |
| IL_4V5B_299 | 1/DA/1129:1133, 1/DA/1141:1143 | No text annotation Not in a motif group | ||
| IL_4V5B_300 | 1/DA/1158:1162, 1/DA/1174:1181 | No text annotation Not in a motif group | ||
| IL_4V5B_301 | 1/DA/1247:1253, 1/DA/1284:1290 | No text annotation Not in a motif group | homologous IL_5J7L_054 IL_09129.1 | |
| IL_4V5B_302 | 1/DA/1255:1258, 1/DA/1277:1282 | No text annotation Not in a motif group | homologous IL_4LFB_052 IL_84205.1 | |
| IL_4V5B_303 | 1/DA/1259:1263, 1/DA/1272:1276 | Triple sheared Not in a motif group | homologous IL_5J7L_056 IL_56467.8 | |
| IL_4V5B_304 | 1/DA/1399:1401, 1/DA/1501:1504 | No text annotation Not in a motif group | geometric IL_4V88_463 IL_36143.3 | |
| IL_4V5B_305 | 1/DA/1401:1404, 1/DA/1497:1501 | No text annotation Not in a motif group | geometric IL_4V88_464 IL_99670.1 | |
| IL_4V5B_306 | 1/DA/1405:1412, 1/DA/1488:1496 | No text annotation Not in a motif group | ||
| IL_4V5B_307 | 1/DA/1412:1414, 1/DA/1486:1488 | No text annotation Not in a motif group | homologous IL_4LFB_059 IL_95997.1 | |
| IL_4V5B_308 | 1/DA/1416:1419, 1/DA/1481:1484 | Double sheared Not in a motif group | homologous IL_5J7L_062 IL_09705.9 | |
| IL_4V5B_309 | 1/DA/1429:1435, 1/DA/1466:1471 | No text annotation Not in a motif group | ||
| IL_4V5B_310 | 1/DA/1439:1442, 1/DA/1460:1462 | Major groove platform with extra cWW Not in a motif group | geometric IL_3PDR_004 IL_18471.2 | |
| IL_4V5B_311 | 1/DA/1445:1448, 1/DA/1455:1457 | No text annotation Not in a motif group | homologous IL_5J7L_065 IL_02284.5 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_4V5B_079 | No text annotation | ||
| IL_4V5B_107 | No text annotation | ||
| IL_4V5B_113 | No text annotation | ||
| IL_4V5B_120 | No text annotation | ||
| IL_4V5B_157 | No text annotation | ||
| IL_4V5B_230 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J3_4V5B_001 | 1/AA/10:16, 1/AA/68:70, 1/AA/106:110 | No text annotation Not in a motif group | ||
| J3_4V5B_002 | 1/AB/54:57, 1/AB/70:76, 1/AB/110:116 | No text annotation Not in a motif group | ||
| J3_4V5B_003 | 1/AB/683:690, 1/AB/772:775, 1/AB/791:794 | No text annotation Not in a motif group | ||
| J3_4V5B_004 | 1/AB/698:700, 1/AB/732:736, 1/AB/760:763 | No text annotation Not in a motif group | homologous J3_7RQB_005 NA | |
| J3_4V5B_005 | 1/AB/1298:1303, 1/AB/1625:1627, 1/AB/1639:1642 | No text annotation Not in a motif group | homologous J3_5J7L_041 NA | |
| J3_4V5B_006 | 1/AB/1306:1309, 1/AB/1605:1611, 1/AB/1620:1622 | No text annotation Not in a motif group | homologous J3_7RQB_008 NA | |
| J3_4V5B_007 | 1/AB/2091:2093, 1/AB/2196:2201, 1/AB/2222:2228 | No text annotation Not in a motif group | homologous J3_4WF9_007 NA | |
| J3_4V5B_008 | 1/AB/2295:2301, 1/AB/2315:2323, 1/AB/2332:2337 | No text annotation Not in a motif group | ||
| J3_4V5B_009 | 1/AB/2517:2520, 1/AB/2545:2548, 1/AB/2560:2567 | No text annotation Not in a motif group | ||
| J3_4V5B_010 | 1/AB/2789:2791, 1/AB/2805:2806, 1/AB/2892:2894 | No text annotation Not in a motif group | ||
| J3_4V5B_011 | 1/AB/2812:2815, 1/AB/2831:2836, 1/AB/2882:2888 | No text annotation Not in a motif group | ||
| J3_4V5B_012 | 1/BA/46:47, 1/BA/361:369, 1/BA/392:395 | No text annotation Not in a motif group | ||
| J3_4V5B_013 | 1/BA/584:588, 1/BA/651:654, 1/BA/754:757 | No text annotation Not in a motif group | ||
| J3_4V5B_014 | 1/BA/672:673, 1/BA/717:725, 1/BA/732:734 | No text annotation Not in a motif group | ||
| J3_4V5B_015 | 1/BA/826:830, 1/BA/856:861, 1/BA/868:874 | No text annotation Not in a motif group | ||
| J3_4V5B_016 | 1/BA/941:949, 1/BA/1232:1237, 1/BA/1337:1342 | No text annotation Not in a motif group | ||
| J3_4V5B_017 | 1/BA/952:963, 1/BA/972:984, 1/BA/1221:1229 | No text annotation Not in a motif group | ||
| J3_4V5B_018 | 1/BA/990:993, 1/BA/1045:1047, 1/BA/1210:1215 | No text annotation Not in a motif group | ||
| J3_4V5B_019 | 1/BA/1002:1009, 1/BA/1020:1027, 1/BA/1034:1038 | No text annotation Not in a motif group | ||
| J3_4V5B_020 | 1/BA/1115:1121, 1/BA/1152:1158, 1/BA/1181:1185 | No text annotation Not in a motif group | ||
| J3_4V5B_021 | 1/BA/1237:1242, 1/BA/1295:1303, 1/BA/1334:1337 | No text annotation Not in a motif group | ||
| J3_4V5B_022 | 1/CB/55:57, 1/CB/70:75, 1/CB/112:115 | No text annotation Not in a motif group | ||
| J3_4V5B_023 | 1/CB/683:690, 1/CB/772:775, 1/CB/791:794 | No text annotation Not in a motif group | ||
| J3_4V5B_024 | 1/CB/698:700, 1/CB/732:736, 1/CB/760:763 | No text annotation Not in a motif group | ||
| J3_4V5B_025 | 1/CB/1055:1062, 1/CB/1076:1090, 1/CB/1101:1104 | No text annotation Not in a motif group | ||
| J3_4V5B_026 | 1/CB/1298:1303, 1/CB/1625:1627, 1/CB/1639:1642 | No text annotation Not in a motif group | homologous J3_5J7L_041 NA | |
| J3_4V5B_027 | 1/CB/1306:1309, 1/CB/1605:1611, 1/CB/1620:1622 | No text annotation Not in a motif group | homologous J3_7RQB_008 NA | |
| J3_4V5B_028 | 1/CB/2091:2093, 1/CB/2196:2201, 1/CB/2222:2228 | No text annotation Not in a motif group | ||
| J3_4V5B_029 | 1/CB/2295:2301, 1/CB/2315:2323, 1/CB/2332:2337 | No text annotation Not in a motif group | ||
| J3_4V5B_030 | 1/CB/2517:2520, 1/CB/2545:2549, 1/CB/2559:2567 | No text annotation Not in a motif group | ||
| J3_4V5B_031 | 1/CB/2789:2791, 1/CB/2805:2806, 1/CB/2892:2894 | No text annotation Not in a motif group | ||
| J3_4V5B_032 | 1/CB/2812:2815, 1/CB/2831:2836, 1/CB/2882:2888 | No text annotation Not in a motif group | ||
| J3_4V5B_033 | 1/DA/43:47, 1/DA/361:369, 1/DA/392:399 | No text annotation Not in a motif group | ||
| J3_4V5B_034 | 1/DA/936:940, 1/DA/1343:1350, 1/DA/1372:1379 | No text annotation Not in a motif group | ||
| J3_4V5B_035 | 1/DA/990:993, 1/DA/1045:1047, 1/DA/1210:1215 | No text annotation Not in a motif group | ||
| J3_4V5B_036 | 1/DA/1063:1068, 1/DA/1107:1113, 1/DA/1187:1193 | No text annotation Not in a motif group | ||
| J3_4V5B_037 | 1/DA/1073:1074, 1/DA/1083:1087, 1/DA/1098:1102 | No text annotation Not in a motif group | homologous J3_6CZR_024 NA | |
| J3_4V5B_038 | 1/DA/1114:1119, 1/DA/1154:1158, 1/DA/1181:1186 | No text annotation Not in a motif group |
Problematic loops
No problematic loops
Coloring options: