4V7R Internal, Hairpin and 3-way Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_4V7R_001 | 1/A1/7:17 | No text annotation Not in a motif group | homologous HL_4V88_186 HL_89881.2 | |
| HL_4V7R_002 | 1/A1/70:83 | No text annotation Not in a motif group | ||
| HL_4V7R_003 | 1/A1/154:160 | Other HL Not in a motif group | homologous HL_4V88_188 HL_76539.5 | |
| HL_4V7R_004 | 1/A1/190:195 | No text annotation Not in a motif group | ||
| HL_4V7R_005 | 1/A1/230:235 | UNCG Not in a motif group | geometric HL_1I6U_001 HL_03562.2 | |
| HL_4V7R_006 | 1/A1/275:281 | No text annotation Not in a motif group | ||
| HL_4V7R_007 | 1/A1/330:338 | No text annotation Not in a motif group | homologous HL_4V88_193 HL_69023.2 | |
| HL_4V7R_008 | 1/A1/368:373 | No text annotation Not in a motif group | homologous HL_4V88_194 HL_50142.2 | |
| HL_4V7R_009 | 1/A1/393:404 | No text annotation Not in a motif group | homologous HL_4V88_195 HL_84288.1 | |
| HL_4V7R_010 | 1/A1/414:419 | UNCG Not in a motif group | homologous HL_4V88_196 HL_03562.2 | |
| HL_4V7R_011 | 1/A1/450:456 | No text annotation Not in a motif group | ||
| HL_4V7R_012 | 1/A1/491:496 | No text annotation Not in a motif group | ||
| HL_4V7R_013 | 1/A1/523:530 | No text annotation Not in a motif group | ||
| HL_4V7R_014 | 1/A1/569:574 | Other HL Not in a motif group | homologous HL_4V88_200 HL_53845.3 | |
| HL_4V7R_016 | 1/A1/715:723 | No text annotation Not in a motif group | ||
| HL_4V7R_017 | 1/A1/764:772 | No text annotation Not in a motif group | geometric HL_4V88_203 HL_46766.2 | |
| HL_4V7R_018 | 1/A1/777:783 | No text annotation Not in a motif group | geometric HL_2ZNI_001 HL_26380.1 | |
| HL_4V7R_019 | 1/A1/827:845 | No text annotation Not in a motif group | ||
| HL_4V7R_020 | 1/A1/900:909 | No text annotation Not in a motif group | homologous HL_4V88_206 HL_12326.1 | |
| HL_4V7R_021 | 1/A1/937:942 | Other HL Not in a motif group | homologous HL_4V88_207 HL_87030.2 | |
| HL_4V7R_022 | 1/A1/997:1007 | No text annotation Not in a motif group | geometric HL_4V88_208 HL_12326.1 | |
| HL_4V7R_023 | 1/A1/1055:1064 | No text annotation Not in a motif group | ||
| HL_4V7R_024 | 1/A1/1084:1089 | Other HL Not in a motif group | homologous HL_4V88_210 HL_35490.2 | |
| HL_4V7R_025 | 1/A1/1121:1126 | GNRA Not in a motif group | homologous HL_4V88_211 HL_35490.2 | |
| HL_4V7R_026 | 1/A1/1188:1197 | No text annotation Not in a motif group | geometric HL_4V88_212 HL_73530.2 | |
| HL_4V7R_027 | 1/A1/1238:1247 | No text annotation Not in a motif group | homologous HL_4V88_213 HL_53597.4 | |
| HL_4V7R_028 | 1/A1/1296:1301 | GNRA Not in a motif group | geometric HL_6CZR_095 HL_35490.2 | |
| HL_4V7R_029 | 1/A1/1309:1316 | No text annotation Not in a motif group | homologous HL_4V88_215 HL_71554.2 | |
| HL_4V7R_030 | 1/A1/1358:1365 | No text annotation Not in a motif group | ||
| HL_4V7R_031 | 1/A1/1395:1403 | No text annotation Not in a motif group | geometric HL_3RG5_006 HL_71170.1 | |
| HL_4V7R_032 | 1/A1/1501:1506 | GNRA Not in a motif group | homologous HL_4V88_218 HL_35490.2 | |
| HL_4V7R_033 | 1/A1/1550:1561 | No text annotation Not in a motif group | ||
| HL_4V7R_034 | 1/A1/1594:1602 | No text annotation Not in a motif group | homologous HL_4V88_220 HL_75828.1 | |
| HL_4V7R_035 | 1/A1/1675:1726 | No text annotation Not in a motif group | ||
| HL_4V7R_036 | 1/A1/1778:1783 | Other HL Not in a motif group | homologous HL_4V88_222 HL_16173.1 | |
| HL_4V7R_037 | 1/B1/38:45 | No text annotation Not in a motif group | geometric HL_4WF9_006 HL_06192.2 | |
| HL_4V7R_038 | 1/B1/69:74 | No text annotation Not in a motif group | ||
| HL_4V7R_039 | 1/B1/90:96 | No text annotation Not in a motif group | homologous HL_5TBW_003 HL_67216.7 | |
| HL_4V7R_041 | 1/B1/194:201 | T-loop with 1 bulged base Not in a motif group | homologous HL_5TBW_005 HL_41998.1 | |
| HL_4V7R_042 | 1/B1/208:212 | No text annotation Not in a motif group | homologous HL_5TBW_006 HL_98984.4 | |
| HL_4V7R_043 | 1/B1/216:224 | No text annotation Not in a motif group | homologous HL_8C3A_007 HL_08002.9 | |
| HL_4V7R_044 | 1/B1/278:287 | No text annotation Not in a motif group | homologous HL_8C3A_008 HL_71554.2 | |
| HL_4V7R_045 | 1/B1/303:312 | No text annotation Not in a motif group | homologous HL_5TBW_009 HL_12078.4 | |
| HL_4V7R_046 | 1/B1/357:362 | No text annotation Not in a motif group | homologous HL_8C3A_010 HL_35490.2 | |
| HL_4V7R_047 | 1/B1/382:387 | No text annotation Not in a motif group | ||
| HL_4V7R_048 | 1/B1/543:548 | No text annotation Not in a motif group | geometric HL_4LFB_005 HL_91104.1 | |
| HL_4V7R_049 | 1/B1/599:604 | GNRA Not in a motif group | homologous HL_5TBW_013 HL_35490.2 | |
| HL_4V7R_050 | 1/B1/640:649 | T-loop with 2 stacked bulged bases Not in a motif group | homologous HL_5TBW_014 HL_41998.1 | |
| HL_4V7R_051 | 1/B1/687:693 | No text annotation Not in a motif group | geometric HL_5J7L_151 HL_90617.3 | |
| HL_4V7R_052 | 1/B1/707:712 | GNRA Not in a motif group | homologous HL_5TBW_016 HL_35490.2 | |
| HL_4V7R_053 | 1/B1/732:737 | No text annotation Not in a motif group | ||
| HL_4V7R_054 | 1/B1/762:769 | No text annotation Not in a motif group | geometric HL_7RQB_009 HL_89098.2 | |
| HL_4V7R_055 | 1/B1/844:849 | No text annotation Not in a motif group | homologous HL_8C3A_019 HL_35490.2 | |
| HL_4V7R_056 | 1/B1/876:885 | No text annotation Not in a motif group | homologous HL_5TBW_020 HL_39334.6 | |
| HL_4V7R_057 | 1/B1/910:918 | No text annotation Not in a motif group | homologous HL_8C3A_021 HL_33817.1 | |
| HL_4V7R_058 | 1/B1/958:963 | No text annotation Not in a motif group | homologous HL_8C3A_022 HL_96598.1 | |
| HL_4V7R_059 | 1/B1/1023:1029 | No text annotation Not in a motif group | ||
| HL_4V7R_060 | 1/B1/1076:1083 | No text annotation Not in a motif group | geometric HL_4V88_215 HL_71554.2 | |
| HL_4V7R_061 | 1/B1/1126:1132 | GNRA Not in a motif group | homologous HL_5TBW_025 HL_35490.2 | |
| HL_4V7R_062 | 1/B1/1148:1155 | No text annotation Not in a motif group | homologous HL_5TBW_026 HL_64430.2 | |
| HL_4V7R_063 | 1/B1/1239:1249 | No text annotation Not in a motif group | ||
| HL_4V7R_064 | 1/B1/1266:1275 | No text annotation Not in a motif group | ||
| HL_4V7R_065 | 1/B1/1346:1358 | No text annotation Not in a motif group | ||
| HL_4V7R_066 | 1/B1/1403:1408 | GNRA Not in a motif group | homologous HL_5TBW_030 HL_35490.2 | |
| HL_4V7R_067 | 1/B1/1462:1470 | T-loop with 2 stacked bulged bases Not in a motif group | homologous HL_5TBW_031 HL_41998.1 | |
| HL_4V7R_068 | 1/B1/1506:1512 | No text annotation Not in a motif group | homologous HL_8C3A_032 HL_46680.1 | |
| HL_4V7R_069 | 1/B1/1544:1549 | Other HL Not in a motif group | homologous HL_5TBW_033 HL_76539.5 | |
| HL_4V7R_070 | 1/B1/1565:1574 | No text annotation Not in a motif group | ||
| HL_4V7R_071 | 1/B1/1599:1608 | No text annotation Not in a motif group | homologous HL_5TBW_035 HL_69023.2 | |
| HL_4V7R_072 | 1/B1/1634:1639 | GNRA Not in a motif group | homologous HL_5TBW_036 HL_35490.2 | |
| HL_4V7R_073 | 1/B1/1680:1688 | No text annotation Not in a motif group | homologous HL_5TBW_037 HL_84827.1 | |
| HL_4V7R_074 | 1/B1/1719:1725 | No text annotation Not in a motif group | homologous HL_8C3A_038 HL_86373.3 | |
| HL_4V7R_075 | 1/B1/1760:1765 | No text annotation Not in a motif group | geometric HL_5VSU_001 HL_35490.2 | |
| HL_4V7R_076 | 1/B1/1792:1796 | No text annotation Not in a motif group | homologous HL_8C3A_040 HL_49678.2 | |
| HL_4V7R_077 | 1/B1/1844:1851 | No text annotation Not in a motif group | homologous HL_5TBW_041 HL_64430.2 | |
| HL_4V7R_078 | 1/B1/1862:1868 | GNRA with one bulged base Not in a motif group | homologous HL_5TBW_042 HL_35490.2 | |
| HL_4V7R_079 | 1/B1/1923:1928 | UNCG Not in a motif group | homologous HL_5TBW_043 HL_03562.2 | |
| HL_4V7R_081 | 1/B1/2110:2114 | No text annotation Not in a motif group | homologous HL_8C3A_045 HL_86735.1 | |
| HL_4V7R_082 | 1/B1/2135:2145 | No text annotation Not in a motif group | homologous HL_5TBW_046 HL_43613.5 | |
| HL_4V7R_083 | 1/B1/2164:2170 | GNRA Not in a motif group | homologous HL_5TBW_047 HL_35490.2 | |
| HL_4V7R_084 | 1/B1/2220:2225 | No text annotation Not in a motif group | homologous HL_8C3A_048 HL_35490.2 | |
| HL_4V7R_085 | 1/B1/2253:2263 | No text annotation Not in a motif group | geometric HL_2Y9H_003 HL_16173.1 | |
| HL_4V7R_086 | 1/B1/2292:2300 | No text annotation Not in a motif group | homologous HL_5TBW_050 HL_51824.1 | |
| HL_4V7R_087 | 1/B1/2369:2378 | No text annotation Not in a motif group | homologous HL_8C3A_051 HL_90642.6 | |
| HL_4V7R_089 | 1/B1/2536:2543 | No text annotation Not in a motif group | geometric HL_2Y9H_005 HL_47100.1 | |
| HL_4V7R_090 | 1/B1/2568:2573 | No text annotation Not in a motif group | geometric HL_2Y8W_001 HL_70072.1 | |
| HL_4V7R_091 | 1/B1/2616:2624 | No text annotation Not in a motif group | homologous HL_5TBW_054 HL_53171.2 | |
| HL_4V7R_092 | 1/B1/2633:2645 | No text annotation Not in a motif group | homologous HL_5TBW_055 HL_19870.6 | |
| HL_4V7R_093 | 1/B1/2672:2682 | No text annotation Not in a motif group | ||
| HL_4V7R_094 | 1/B1/2693:2700 | No text annotation Not in a motif group | homologous HL_5TBW_057 HL_12078.4 | |
| HL_4V7R_095 | 1/B1/2724:2732 | No text annotation Not in a motif group | ||
| HL_4V7R_096 | 1/B1/2744:2749 | GNRA Not in a motif group | homologous HL_5TBW_059 HL_35490.2 | |
| HL_4V7R_097 | 1/B1/2776:2784 | No text annotation Not in a motif group | homologous HL_8C3A_061 HL_96598.1 | |
| HL_4V7R_098 | 1/B1/2840:2848 | No text annotation Not in a motif group | homologous HL_5TBW_061 HL_06192.2 | |
| HL_4V7R_099 | 1/B1/2896:2905 | No text annotation Not in a motif group | ||
| HL_4V7R_100 | 1/B1/2920:2926 | No text annotation Not in a motif group | homologous HL_8C3A_064 HL_43656.2 | |
| HL_4V7R_101 | 1/B1/2963:2968 | No text annotation Not in a motif group | homologous HL_8C3A_065 HL_35490.2 | |
| HL_4V7R_102 | 1/B1/3025:3030 | GNRA Not in a motif group | homologous HL_5TBW_065 HL_35490.2 | |
| HL_4V7R_103 | 1/B1/3068:3073 | Ribsomal LSU H95 Not in a motif group | homologous HL_5TBW_066 HL_46680.1 | |
| HL_4V7R_104 | 1/B1/3110:3124 | No text annotation Not in a motif group | ||
| HL_4V7R_105 | 1/B1/3193:3199 | No text annotation Not in a motif group | geometric HL_2Y8W_001 HL_70072.1 | |
| HL_4V7R_106 | 1/B1/3240:3247 | No text annotation Not in a motif group | geometric HL_5NFV_001 HL_76539.5 | |
| HL_4V7R_107 | 1/B1/3303:3311 | No text annotation Not in a motif group | homologous HL_5TBW_070 HL_64690.1 | |
| HL_4V7R_108 | 1/B1/3347:3358 | No text annotation Not in a motif group | ||
| HL_4V7R_109 | 1/B2/28:52 | No text annotation Not in a motif group | ||
| HL_4V7R_110 | 1/B2/88:93 | GNRA Not in a motif group | homologous HL_5TBW_186 HL_35490.2 | |
| HL_4V7R_111 | 1/B3/47:56 | No text annotation Not in a motif group | geometric HL_7RQB_001 HL_99167.2 | |
| HL_4V7R_112 | 1/B3/68:91 | No text annotation Not in a motif group | ||
| HL_4V7R_113 | 1/B3/109:113 | No text annotation Not in a motif group | geometric HL_4YAZ_004 HL_91104.1 | |
| HL_4V7R_114 | 1/B3/124:129 | No text annotation Not in a motif group | ||
| HL_4V7R_115 | 1/C1/7:17 | No text annotation Not in a motif group | homologous HL_4V88_186 HL_89881.2 | |
| HL_4V7R_116 | 1/C1/70:83 | No text annotation Not in a motif group | ||
| HL_4V7R_117 | 1/C1/154:160 | Other HL Not in a motif group | homologous HL_4V88_188 HL_76539.5 | |
| HL_4V7R_118 | 1/C1/190:195 | No text annotation Not in a motif group | ||
| HL_4V7R_119 | 1/C1/230:235 | UNCG Not in a motif group | geometric HL_1I6U_001 HL_03562.2 | |
| HL_4V7R_120 | 1/C1/275:281 | No text annotation Not in a motif group | ||
| HL_4V7R_121 | 1/C1/330:338 | No text annotation Not in a motif group | homologous HL_4V88_193 HL_69023.2 | |
| HL_4V7R_122 | 1/C1/368:373 | No text annotation Not in a motif group | homologous HL_4V88_194 HL_50142.2 | |
| HL_4V7R_123 | 1/C1/393:404 | No text annotation Not in a motif group | homologous HL_4V88_195 HL_84288.1 | |
| HL_4V7R_124 | 1/C1/414:419 | UNCG Not in a motif group | homologous HL_4V88_196 HL_03562.2 | |
| HL_4V7R_125 | 1/C1/450:456 | No text annotation Not in a motif group | ||
| HL_4V7R_126 | 1/C1/491:496 | No text annotation Not in a motif group | ||
| HL_4V7R_127 | 1/C1/523:530 | No text annotation Not in a motif group | ||
| HL_4V7R_128 | 1/C1/569:574 | Other HL Not in a motif group | homologous HL_4V88_200 HL_53845.3 | |
| HL_4V7R_130 | 1/C1/715:723 | No text annotation Not in a motif group | ||
| HL_4V7R_131 | 1/C1/764:772 | No text annotation Not in a motif group | homologous HL_4V88_203 HL_46766.2 | |
| HL_4V7R_132 | 1/C1/777:783 | No text annotation Not in a motif group | geometric HL_2ZNI_001 HL_26380.1 | |
| HL_4V7R_133 | 1/C1/827:845 | No text annotation Not in a motif group | ||
| HL_4V7R_134 | 1/C1/900:909 | No text annotation Not in a motif group | homologous HL_4V88_206 HL_12326.1 | |
| HL_4V7R_135 | 1/C1/937:942 | Other HL Not in a motif group | homologous HL_4V88_207 HL_87030.2 | |
| HL_4V7R_136 | 1/C1/997:1007 | No text annotation Not in a motif group | geometric HL_4V88_208 HL_12326.1 | |
| HL_4V7R_137 | 1/C1/1055:1064 | No text annotation Not in a motif group | ||
| HL_4V7R_138 | 1/C1/1084:1089 | Other HL Not in a motif group | homologous HL_4V88_210 HL_35490.2 | |
| HL_4V7R_139 | 1/C1/1121:1126 | GNRA Not in a motif group | homologous HL_4V88_211 HL_35490.2 | |
| HL_4V7R_140 | 1/C1/1188:1197 | No text annotation Not in a motif group | geometric HL_4V88_212 HL_73530.2 | |
| HL_4V7R_141 | 1/C1/1238:1247 | No text annotation Not in a motif group | homologous HL_4V88_213 HL_53597.4 | |
| HL_4V7R_142 | 1/C1/1296:1301 | GNRA Not in a motif group | geometric HL_6CZR_095 HL_35490.2 | |
| HL_4V7R_143 | 1/C1/1309:1316 | No text annotation Not in a motif group | homologous HL_4V88_215 HL_71554.2 | |
| HL_4V7R_144 | 1/C1/1358:1365 | No text annotation Not in a motif group | ||
| HL_4V7R_145 | 1/C1/1395:1403 | No text annotation Not in a motif group | geometric HL_3RG5_006 HL_71170.1 | |
| HL_4V7R_146 | 1/C1/1501:1506 | GNRA Not in a motif group | homologous HL_4V88_218 HL_35490.2 | |
| HL_4V7R_147 | 1/C1/1550:1561 | No text annotation Not in a motif group | ||
| HL_4V7R_148 | 1/C1/1594:1602 | No text annotation Not in a motif group | homologous HL_4V88_220 HL_75828.1 | |
| HL_4V7R_149 | 1/C1/1675:1726 | No text annotation Not in a motif group | ||
| HL_4V7R_150 | 1/C1/1778:1783 | Other HL Not in a motif group | homologous HL_4V88_222 HL_16173.1 | |
| HL_4V7R_151 | 1/D1/38:45 | No text annotation Not in a motif group | homologous HL_8C3A_001 HL_06192.2 | |
| HL_4V7R_152 | 1/D1/69:74 | No text annotation Not in a motif group | ||
| HL_4V7R_153 | 1/D1/90:96 | No text annotation Not in a motif group | homologous HL_5TBW_003 HL_67216.7 | |
| HL_4V7R_154 | 1/D1/132:136 | No text annotation Not in a motif group | ||
| HL_4V7R_155 | 1/D1/194:201 | T-loop with 1 bulged base Not in a motif group | homologous HL_5TBW_005 HL_41998.1 | |
| HL_4V7R_156 | 1/D1/208:212 | No text annotation Not in a motif group | homologous HL_5TBW_006 HL_98984.4 | |
| HL_4V7R_157 | 1/D1/216:224 | No text annotation Not in a motif group | homologous HL_8C3A_007 HL_08002.9 | |
| HL_4V7R_158 | 1/D1/278:287 | No text annotation Not in a motif group | homologous HL_8C3A_008 HL_71554.2 | |
| HL_4V7R_159 | 1/D1/303:312 | No text annotation Not in a motif group | homologous HL_5TBW_009 HL_12078.4 | |
| HL_4V7R_160 | 1/D1/357:362 | No text annotation Not in a motif group | homologous HL_8C3A_010 HL_35490.2 | |
| HL_4V7R_161 | 1/D1/382:387 | No text annotation Not in a motif group | ||
| HL_4V7R_162 | 1/D1/543:548 | No text annotation Not in a motif group | geometric HL_4LFB_005 HL_91104.1 | |
| HL_4V7R_163 | 1/D1/599:604 | GNRA Not in a motif group | homologous HL_5TBW_013 HL_35490.2 | |
| HL_4V7R_164 | 1/D1/640:649 | T-loop with 2 stacked bulged bases Not in a motif group | homologous HL_5TBW_014 HL_41998.1 | |
| HL_4V7R_165 | 1/D1/687:693 | No text annotation Not in a motif group | geometric HL_5J7L_151 HL_90617.3 | |
| HL_4V7R_166 | 1/D1/707:712 | GNRA Not in a motif group | homologous HL_5TBW_016 HL_35490.2 | |
| HL_4V7R_167 | 1/D1/732:737 | No text annotation Not in a motif group | ||
| HL_4V7R_168 | 1/D1/762:769 | No text annotation Not in a motif group | geometric HL_7RQB_009 HL_89098.2 | |
| HL_4V7R_169 | 1/D1/844:849 | No text annotation Not in a motif group | homologous HL_8C3A_019 HL_35490.2 | |
| HL_4V7R_170 | 1/D1/876:885 | No text annotation Not in a motif group | homologous HL_5TBW_020 HL_39334.6 | |
| HL_4V7R_171 | 1/D1/910:918 | No text annotation Not in a motif group | homologous HL_8C3A_021 HL_33817.1 | |
| HL_4V7R_172 | 1/D1/958:963 | No text annotation Not in a motif group | homologous HL_8C3A_022 HL_96598.1 | |
| HL_4V7R_173 | 1/D1/1023:1029 | No text annotation Not in a motif group | ||
| HL_4V7R_174 | 1/D1/1076:1083 | No text annotation Not in a motif group | homologous HL_8C3A_024 HL_71554.2 | |
| HL_4V7R_175 | 1/D1/1126:1132 | GNRA Not in a motif group | homologous HL_5TBW_025 HL_35490.2 | |
| HL_4V7R_176 | 1/D1/1148:1155 | No text annotation Not in a motif group | homologous HL_5TBW_026 HL_64430.2 | |
| HL_4V7R_177 | 1/D1/1239:1249 | No text annotation Not in a motif group | homologous HL_8C3A_027 HL_07145.2 | |
| HL_4V7R_178 | 1/D1/1267:1274 | No text annotation Not in a motif group | ||
| HL_4V7R_179 | 1/D1/1346:1358 | No text annotation Not in a motif group | ||
| HL_4V7R_180 | 1/D1/1403:1408 | GNRA Not in a motif group | homologous HL_5TBW_030 HL_35490.2 | |
| HL_4V7R_181 | 1/D1/1462:1470 | T-loop with 2 stacked bulged bases Not in a motif group | homologous HL_5TBW_031 HL_41998.1 | |
| HL_4V7R_182 | 1/D1/1506:1512 | No text annotation Not in a motif group | homologous HL_8C3A_032 HL_46680.1 | |
| HL_4V7R_183 | 1/D1/1544:1549 | Other HL Not in a motif group | homologous HL_5TBW_033 HL_76539.5 | |
| HL_4V7R_184 | 1/D1/1565:1574 | No text annotation Not in a motif group | ||
| HL_4V7R_185 | 1/D1/1599:1608 | No text annotation Not in a motif group | homologous HL_5TBW_035 HL_69023.2 | |
| HL_4V7R_186 | 1/D1/1634:1639 | GNRA Not in a motif group | homologous HL_5TBW_036 HL_35490.2 | |
| HL_4V7R_187 | 1/D1/1680:1688 | No text annotation Not in a motif group | homologous HL_5TBW_037 HL_84827.1 | |
| HL_4V7R_188 | 1/D1/1719:1725 | No text annotation Not in a motif group | homologous HL_8C3A_038 HL_86373.3 | |
| HL_4V7R_189 | 1/D1/1760:1765 | No text annotation Not in a motif group | geometric HL_5VSU_001 HL_35490.2 | |
| HL_4V7R_190 | 1/D1/1792:1796 | No text annotation Not in a motif group | homologous HL_8C3A_040 HL_49678.2 | |
| HL_4V7R_191 | 1/D1/1844:1851 | No text annotation Not in a motif group | homologous HL_5TBW_041 HL_64430.2 | |
| HL_4V7R_192 | 1/D1/1862:1868 | GNRA with one bulged base Not in a motif group | homologous HL_5TBW_042 HL_35490.2 | |
| HL_4V7R_193 | 1/D1/1923:1928 | No text annotation Not in a motif group | homologous HL_8C3A_043 HL_03562.2 | |
| HL_4V7R_195 | 1/D1/2110:2114 | No text annotation Not in a motif group | homologous HL_8C3A_045 HL_86735.1 | |
| HL_4V7R_196 | 1/D1/2135:2145 | No text annotation Not in a motif group | homologous HL_5TBW_046 HL_43613.5 | |
| HL_4V7R_197 | 1/D1/2164:2170 | GNRA Not in a motif group | homologous HL_5TBW_047 HL_35490.2 | |
| HL_4V7R_198 | 1/D1/2220:2225 | No text annotation Not in a motif group | homologous HL_8C3A_048 HL_35490.2 | |
| HL_4V7R_199 | 1/D1/2253:2263 | No text annotation Not in a motif group | geometric HL_2Y9H_003 HL_16173.1 | |
| HL_4V7R_200 | 1/D1/2292:2300 | No text annotation Not in a motif group | homologous HL_5TBW_050 HL_51824.1 | |
| HL_4V7R_201 | 1/D1/2369:2378 | No text annotation Not in a motif group | homologous HL_8C3A_051 HL_90642.6 | |
| HL_4V7R_202 | 1/D1/2470:2475 | No text annotation Not in a motif group | ||
| HL_4V7R_203 | 1/D1/2536:2543 | No text annotation Not in a motif group | geometric HL_2Y9H_005 HL_47100.1 | |
| HL_4V7R_204 | 1/D1/2568:2573 | No text annotation Not in a motif group | geometric HL_2Y8W_001 HL_70072.1 | |
| HL_4V7R_205 | 1/D1/2616:2624 | No text annotation Not in a motif group | homologous HL_5TBW_054 HL_53171.2 | |
| HL_4V7R_206 | 1/D1/2633:2645 | No text annotation Not in a motif group | homologous HL_5TBW_055 HL_19870.6 | |
| HL_4V7R_207 | 1/D1/2672:2682 | No text annotation Not in a motif group | ||
| HL_4V7R_208 | 1/D1/2693:2700 | No text annotation Not in a motif group | homologous HL_5TBW_057 HL_12078.4 | |
| HL_4V7R_209 | 1/D1/2724:2732 | No text annotation Not in a motif group | ||
| HL_4V7R_210 | 1/D1/2744:2749 | GNRA Not in a motif group | homologous HL_5TBW_059 HL_35490.2 | |
| HL_4V7R_211 | 1/D1/2776:2784 | No text annotation Not in a motif group | homologous HL_8C3A_061 HL_96598.1 | |
| HL_4V7R_212 | 1/D1/2840:2848 | No text annotation Not in a motif group | homologous HL_5TBW_061 HL_06192.2 | |
| HL_4V7R_213 | 1/D1/2896:2905 | No text annotation Not in a motif group | ||
| HL_4V7R_214 | 1/D1/2920:2926 | No text annotation Not in a motif group | homologous HL_5TBW_063 HL_43656.2 | |
| HL_4V7R_215 | 1/D1/2963:2968 | No text annotation Not in a motif group | homologous HL_8C3A_065 HL_35490.2 | |
| HL_4V7R_216 | 1/D1/3025:3030 | GNRA Not in a motif group | homologous HL_5TBW_065 HL_35490.2 | |
| HL_4V7R_217 | 1/D1/3068:3073 | Ribsomal LSU H95 Not in a motif group | homologous HL_5TBW_066 HL_46680.1 | |
| HL_4V7R_218 | 1/D1/3110:3124 | No text annotation Not in a motif group | homologous HL_5TBW_067 HL_56677.7 | |
| HL_4V7R_219 | 1/D1/3193:3199 | No text annotation Not in a motif group | geometric HL_2Y8W_001 HL_70072.1 | |
| HL_4V7R_220 | 1/D1/3240:3247 | No text annotation Not in a motif group | geometric HL_4V9F_011 HL_70546.1 | |
| HL_4V7R_221 | 1/D1/3303:3311 | No text annotation Not in a motif group | homologous HL_8C3A_071 HL_64690.1 | |
| HL_4V7R_222 | 1/D1/3347:3358 | No text annotation Not in a motif group | ||
| HL_4V7R_223 | 1/D2/28:52 | No text annotation Not in a motif group | ||
| HL_4V7R_224 | 1/D2/88:93 | GNRA Not in a motif group | homologous HL_5TBW_186 HL_35490.2 | |
| HL_4V7R_225 | 1/D3/47:56 | No text annotation Not in a motif group | geometric HL_7RQB_001 HL_99167.2 | |
| HL_4V7R_226 | 1/D3/68:91 | No text annotation Not in a motif group | ||
| HL_4V7R_227 | 1/D3/109:113 | No text annotation Not in a motif group | geometric HL_4YAZ_004 HL_91104.1 | |
| HL_4V7R_228 | 1/D3/124:129 | No text annotation Not in a motif group |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_4V7R_015 | No text annotation | ||
| HL_4V7R_040 | No text annotation | ||
| HL_4V7R_080 | No text annotation | ||
| HL_4V7R_088 | No text annotation | ||
| HL_4V7R_129 | No text annotation | ||
| HL_4V7R_194 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_4V7R_001 | 1/A1/24:27, 1/A1/599:601 | No text annotation Not in a motif group | ||
| IL_4V7R_002 | 1/A1/28:30, 1/A1/596:598 | No text annotation Not in a motif group | geometric IL_1L9A_003 IL_70707.2 | |
| IL_4V7R_003 | 1/A1/35:37, 1/A1/471:473 | UC cWW Not in a motif group | homologous IL_4V88_385 IL_70707.2 | |
| IL_4V7R_004 | 1/A1/37:41, 1/A1/466:471 | No text annotation Not in a motif group | homologous IL_4V88_386 IL_41507.1 | |
| IL_4V7R_005 | 1/A1/42:48, 1/A1/431:433 | No text annotation Not in a motif group | homologous IL_4V88_387 IL_33912.1 | |
| IL_4V7R_006 | 1/A1/50:52, 1/A1/428:429 | Minor groove platform Not in a motif group | homologous IL_4V88_388 IL_80097.1 | |
| IL_4V7R_007 | 1/A1/57:62, 1/A1/88:90 | No text annotation Not in a motif group | ||
| IL_4V7R_008 | 1/A1/64:70, 1/A1/83:86 | No text annotation Not in a motif group | ||
| IL_4V7R_009 | 1/A1/109:112, 1/A1/302:305 | Tandem non-canonical cWW pairs Not in a motif group | homologous IL_4V88_391 IL_30621.4 | |
| IL_4V7R_010 | 1/A1/113:116, 1/A1/300:301 | Multiple bulged bases Not in a motif group | homologous IL_4V88_392 IL_44546.1 | |
| IL_4V7R_011 | 1/A1/117:122, 1/A1/295:299 | No text annotation Not in a motif group | homologous IL_4V88_393 IL_64181.2 | |
| IL_4V7R_012 | 1/A1/143:149, 1/A1/165:172 | tWH-tWH-tHW-tHW Not in a motif group | homologous IL_4V88_394 IL_80604.2 | |
| IL_4V7R_013 | 1/A1/150:152, 1/A1/162:164 | No text annotation Not in a motif group | homologous IL_4V88_395 IL_76273.1 | |
| IL_4V7R_014 | 1/A1/185:189, 1/A1/196:200 | Triple sheared Not in a motif group | geometric IL_1U6B_002 IL_56467.8 | |
| IL_4V7R_015 | 1/A1/204:206, 1/A1/259:263 | Major groove platform with extra cWW Not in a motif group | homologous IL_4V88_397 IL_05564.2 | |
| IL_4V7R_016 | 1/A1/206:208, 1/A1/257:259 | No text annotation Not in a motif group | geometric IL_4P3T_001 IL_86319.2 | |
| IL_4V7R_017 | 1/A1/270:272, 1/A1/284:285 | No text annotation Not in a motif group | ||
| IL_4V7R_018 | 1/A1/311:316, 1/A1/348:355 | Kink-turn with non-sequential stacking Not in a motif group | homologous IL_4V88_402 IL_45067.2 | |
| IL_4V7R_019 | 1/A1/318:323, 1/A1/345:346 | No text annotation Not in a motif group | geometric IL_5Y58_001 IL_48100.2 | |
| IL_4V7R_020 | 1/A1/364:365, 1/A1/376:380 | No text annotation Not in a motif group | ||
| IL_4V7R_021 | 1/A1/389:391, 1/A1/406:408 | Isolated cWH basepair Not in a motif group | homologous IL_4V88_405 IL_70707.2 | |
| IL_4V7R_022 | 1/A1/411:413, 1/A1/420:422 | Isolated near basepair Not in a motif group | homologous IL_4V88_406 IL_52767.4 | |
| IL_4V7R_023 | 1/A1/439:441, 1/A1/463:464 | Single bulged U Not in a motif group | homologous IL_4V88_407 IL_83039.16 | |
| IL_4V7R_024 | 1/A1/443:447, 1/A1/460:461 | C-loop Not in a motif group | geometric IL_4LFB_015 IL_75255.1 | |
| IL_4V7R_025 | 1/A1/447:448, 1/A1/458:460 | Single bulged G Not in a motif group | geometric IL_5J7L_019 IL_00225.3 | |
| IL_4V7R_026 | 1/A1/479:481, 1/A1/507:509 | No text annotation Not in a motif group | ||
| IL_4V7R_027 | 1/A1/482:483, 1/A1/504:506 | Single bulged A Not in a motif group | geometric IL_5WWT_001 IL_37497.6 | |
| IL_4V7R_028 | 1/A1/485:487, 1/A1/500:502 | No text annotation Not in a motif group | geometric IL_4V88_448 IL_27844.2 | |
| IL_4V7R_029 | 1/A1/487:490, 1/A1/497:500 | No text annotation Not in a motif group | ||
| IL_4V7R_030 | 1/A1/517:520, 1/A1/532:535 | No text annotation Not in a motif group | ||
| IL_4V7R_031 | 1/A1/520:523, 1/A1/530:532 | No text annotation Not in a motif group | ||
| IL_4V7R_032 | 1/A1/550:559, 1/A1/586:588 | No text annotation Not in a motif group | geometric IL_4V88_470 IL_70707.2 | |
| IL_4V7R_033 | 1/A1/562:568, 1/A1/575:583 | No text annotation Not in a motif group | homologous IL_4V88_415 IL_55871.1 | |
| IL_4V7R_034 | 1/A1/624:626, 1/A1/973:975 | No text annotation Not in a motif group | homologous IL_4V88_417 IL_86319.2 | |
| IL_4V7R_035 | 1/A1/627:631, 1/A1/968:972 | tSH-tHW-tHS Not in a motif group | homologous IL_4V88_418 IL_17136.1 | |
| IL_4V7R_037 | 1/A1/646:648, 1/A1/686:688 | No text annotation Not in a motif group | homologous IL_4V88_419 IL_86319.2 | |
| IL_4V7R_038 | 1/A1/713:715, 1/A1/723:725 | No text annotation Not in a motif group | ||
| IL_4V7R_039 | 1/A1/746:747, 1/A1/802:805 | Major groove minor groove platform; mini C-loop Not in a motif group | homologous IL_4V88_423 IL_09061.8 | |
| IL_4V7R_040 | 1/A1/748:750, 1/A1/799:801 | No text annotation Not in a motif group | homologous IL_4V88_424 IL_86319.2 | |
| IL_4V7R_041 | 1/A1/751:759, 1/A1/791:798 | No text annotation Not in a motif group | homologous IL_4V88_425 IL_69091.1 | |
| IL_4V7R_042 | 1/A1/821:827, 1/A1/845:850 | No text annotation Not in a motif group | ||
| IL_4V7R_043 | 1/A1/865:866, 1/A1/962:965 | Major groove platform; stack outside cWW Not in a motif group | homologous IL_4V88_428 IL_50694.2 | |
| IL_4V7R_044 | 1/A1/868:869, 1/A1/958:960 | No text annotation Not in a motif group | ||
| IL_4V7R_045 | 1/A1/871:874, 1/A1/953:956 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_4V88_430 IL_30621.4 | |
| IL_4V7R_046 | 1/A1/874:878, 1/A1/950:953 | Tandem non-canonical cWW pairs Not in a motif group | homologous IL_4V88_431 IL_30621.4 | |
| IL_4V7R_047 | 1/A1/885:888, 1/A1/924:927 | Tandem non-canonical cWW pairs Not in a motif group | homologous IL_4V88_432 IL_30621.4 | |
| IL_4V7R_048 | 1/A1/893:899, 1/A1/910:919 | No text annotation Not in a motif group | homologous IL_8C3A_440 IL_22252.1 | |
| IL_4V7R_049 | 1/A1/985:990, 1/A1/1014:1016 | Other IL Not in a motif group | geometric IL_4V88_435 IL_22046.1 | |
| IL_4V7R_050 | 1/A1/990:994, 1/A1/1010:1014 | tSH-tHW-tHS Not in a motif group | homologous IL_4V88_436 IL_17136.1 | |
| IL_4V7R_051 | 1/A1/995:997, 1/A1/1007:1009 | No text annotation Not in a motif group | geometric IL_4P3U_012 IL_86319.2 | |
| IL_4V7R_052 | 1/A1/1034:1036, 1/A1/1095:1101 | Isolated cWH basepair Not in a motif group | geometric IL_2W2H_002 IL_19557.3 | |
| IL_4V7R_053 | 1/A1/1042:1045, 1/A1/1073:1077 | No text annotation Not in a motif group | ||
| IL_4V7R_054 | 1/A1/1051:1053, 1/A1/1066:1067 | No text annotation Not in a motif group | ||
| IL_4V7R_055 | 1/A1/1111:1118, 1/A1/1129:1134 | 8x6 Sarcin-Ricin with inserted Y; G-bulge Not in a motif group | homologous IL_4V88_440 IL_24606.2 | |
| IL_4V7R_056 | 1/A1/1145:1147, 1/A1/1630:1633 | No text annotation Not in a motif group | ||
| IL_4V7R_057 | 1/A1/1148:1151, 1/A1/1627:1629 | No text annotation Not in a motif group | ||
| IL_4V7R_058 | 1/A1/1157:1160, 1/A1/1617:1621 | No text annotation Not in a motif group | ||
| IL_4V7R_059 | 1/A1/1173:1175, 1/A1/1464:1466 | No text annotation Not in a motif group | homologous IL_4V88_444 IL_86319.2 | |
| IL_4V7R_060 | 1/A1/1178:1179, 1/A1/1459:1461 | Minor groove platform Not in a motif group | homologous IL_4V88_445 IL_42622.4 | |
| IL_4V7R_061 | 1/A1/1213:1215, 1/A1/1448:1450 | UU cWW Not in a motif group | geometric IL_3SZX_003 IL_86319.2 | |
| IL_4V7R_062 | 1/A1/1224:1233, 1/A1/1252:1259 | No text annotation Not in a motif group | ||
| IL_4V7R_063 | 1/A1/1234:1236, 1/A1/1249:1251 | No text annotation Not in a motif group | homologous IL_4V88_448 IL_27844.2 | |
| IL_4V7R_064 | 1/A1/1268:1270, 1/A1/1440:1441 | Single bulged U Not in a motif group | homologous IL_4V88_449 IL_83039.16 | |
| IL_4V7R_065 | 1/A1/1272:1275, 1/A1/1437:1438 | Multiple bulged bases Not in a motif group | geometric IL_1FUF_002 IL_16396.2 | |
| IL_4V7R_066 | 1/A1/1276:1278, 1/A1/1430:1436 | Minor groove platform with extra cWW Not in a motif group | homologous IL_4V88_451 IL_92788.2 | |
| IL_4V7R_067 | 1/A1/1280:1281, 1/A1/1426:1428 | Single bulged A Not in a motif group | homologous IL_4V88_452 IL_37497.6 | |
| IL_4V7R_068 | 1/A1/1290:1292, 1/A1/1323:1325 | Isolated cWH basepair Not in a motif group | homologous IL_4V88_453 IL_70707.2 | |
| IL_4V7R_069 | 1/A1/1294:1296, 1/A1/1301:1303 | UU cWW Not in a motif group | geometric IL_3SZX_003 IL_86319.2 | |
| IL_4V7R_070 | 1/A1/1340:1342, 1/A1/1383:1384 | Single bulged A Not in a motif group | geometric IL_5TBW_113 IL_37497.6 | |
| IL_4V7R_071 | 1/A1/1344:1348, 1/A1/1377:1381 | No text annotation Not in a motif group | ||
| IL_4V7R_073 | 1/A1/1352:1354, 1/A1/1369:1373 | No text annotation Not in a motif group | ||
| IL_4V7R_074 | 1/A1/1355:1357, 1/A1/1366:1368 | No text annotation Not in a motif group | geometric IL_1Y27_001 IL_70707.2 | |
| IL_4V7R_075 | 1/A1/1389:1391, 1/A1/1407:1412 | Major groove platform; stack outside cWW Not in a motif group | homologous IL_4V88_458 IL_58032.1 | |
| IL_4V7R_076 | 1/A1/1480:1487, 1/A1/1519:1527 | No text annotation Not in a motif group | ||
| IL_4V7R_077 | 1/A1/1488:1494, 1/A1/1513:1518 | No text annotation Not in a motif group | ||
| IL_4V7R_078 | 1/A1/1495:1498, 1/A1/1509:1512 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_4V88_461 IL_30621.4 | |
| IL_4V7R_079 | 1/A1/1498:1500, 1/A1/1507:1509 | No text annotation Not in a motif group | geometric IL_1NBS_006 IL_86319.2 | |
| IL_4V7R_080 | 1/A1/1540:1545, 1/A1/1566:1571 | No text annotation Not in a motif group | homologous IL_4V88_462 IL_19954.2 | |
| IL_4V7R_081 | 1/A1/1636:1638, 1/A1/1764:1767 | No text annotation Not in a motif group | geometric IL_4V88_463 IL_36143.3 | |
| IL_4V7R_082 | 1/A1/1638:1641, 1/A1/1760:1764 | No text annotation Not in a motif group | homologous IL_4V88_464 IL_99670.1 | |
| IL_4V7R_083 | 1/A1/1642:1644, 1/A1/1757:1759 | No text annotation Not in a motif group | homologous IL_4V88_465 IL_86319.2 | |
| IL_4V7R_084 | 1/A1/1644:1647, 1/A1/1753:1757 | Non canonical cWW and near pair Not in a motif group | homologous IL_4V88_466 IL_42334.1 | |
| IL_4V7R_085 | 1/A1/1650:1652, 1/A1/1748:1750 | AA cWW Not in a motif group | homologous IL_4V88_467 IL_86319.2 | |
| IL_4V7R_086 | 1/A1/1653:1656, 1/A1/1744:1747 | Double sheared Not in a motif group | homologous IL_4V88_468 IL_09705.10 | |
| IL_4V7R_087 | 1/A1/1656:1658, 1/A1/1743:1744 | No text annotation Not in a motif group | ||
| IL_4V7R_088 | 1/A1/1665:1667, 1/A1/1734:1736 | No text annotation Not in a motif group | homologous IL_4V88_470 IL_70707.2 | |
| IL_4V7R_089 | 1/A1/1669:1672, 1/A1/1729:1732 | Double sheared Not in a motif group | geometric IL_4V88_471 IL_09705.10 | |
| IL_4V7R_090 | 1/A1/1672:1674, 1/A1/1727:1729 | No text annotation Not in a motif group | homologous IL_4V88_472 IL_86319.2 | |
| IL_4V7R_091 | 1/B1/4:12, 1/B3/146:155 | No text annotation Not in a motif group | ||
| IL_4V7R_092 | 1/B1/12:16, 1/B3/143:146 | No text annotation Not in a motif group | ||
| IL_4V7R_093 | 1/B1/18:20, 1/B3/139:141 | No text annotation Not in a motif group | geometric IL_4JGN_004 IL_86319.2 | |
| IL_4V7R_094 | 1/B1/27:28, 1/B1/56:58 | Single stack bend Not in a motif group | homologous IL_5TBW_004 IL_76488.4 | |
| IL_4V7R_095 | 1/B1/32:38, 1/B1/45:52 | 8x7 Sarcin-Ricin; G-bulge Not in a motif group | geometric IL_4V9F_006 IL_04346.7 | |
| IL_4V7R_096 | 1/B1/82:89, 1/B1/97:103 | No text annotation Not in a motif group | homologous IL_5TBW_006 IL_88613.1 | |
| IL_4V7R_097 | 1/B1/117:122, 1/B1/146:151 | No text annotation Not in a motif group | ||
| IL_4V7R_098 | 1/B1/122:124, 1/B1/144:146 | Self complementary Not in a motif group | geometric IL_2D6F_001 IL_52767.4 | |
| IL_4V7R_099 | 1/B1/125:127, 1/B1/141:143 | No text annotation Not in a motif group | homologous IL_8C3A_008 IL_86319.2 | |
| IL_4V7R_100 | 1/B1/164:166, 1/B1/256:257 | Single stack bend Not in a motif group | homologous IL_5TBW_009 IL_76488.4 | |
| IL_4V7R_101 | 1/B1/169:171, 1/B1/247:253 | No text annotation Not in a motif group | ||
| IL_4V7R_102 | 1/B1/171:174, 1/B1/244:247 | No text annotation Not in a motif group | ||
| IL_4V7R_103 | 1/B1/176:178, 1/B1/238:242 | No text annotation Not in a motif group | ||
| IL_4V7R_104 | 1/B1/189:191, 1/B1/204:205 | Single bulged U Not in a motif group | homologous IL_5TBW_012 IL_83039.16 | |
| IL_4V7R_107 | 1/B1/337:339, 1/B3/25:26 | Single bulged A Not in a motif group | homologous IL_5TBW_013 IL_37497.6 | |
| IL_4V7R_108 | 1/B1/376:379, 1/B1/390:403 | No text annotation Not in a motif group | homologous IL_8C3A_015 IL_60992.6 | |
| IL_4V7R_109 | 1/B1/380:382, 1/B1/387:389 | No text annotation Not in a motif group | ||
| IL_4V7R_110 | 1/B1/404:410, 1/B3/13:19 | Triple sheared with non-canonical cWW Not in a motif group | homologous IL_5TBW_015 IL_66414.6 | |
| IL_4V7R_112 | 1/B1/429:431, 1/B1/628:630 | No text annotation Not in a motif group | homologous IL_5TBW_016 IL_70707.2 | |
| IL_4V7R_113 | 1/B1/435:437, 1/B1/623:624 | Single stack bend Not in a motif group | geometric IL_5J7L_269 IL_76488.4 | |
| IL_4V7R_115 | 1/B1/505:506, 1/B1/584:586 | Single stack bend Not in a motif group | geometric IL_7RQB_005 IL_76488.4 | |
| IL_4V7R_116 | 1/B1/508:510, 1/B1/580:582 | Self complementary Not in a motif group | geometric IL_364D_004 IL_86319.2 | |
| IL_4V7R_117 | 1/B1/510:514, 1/B1/576:580 | No text annotation Not in a motif group | ||
| IL_4V7R_118 | 1/B1/517:525, 1/B1/567:573 | No text annotation Not in a motif group | homologous IL_5TBW_019 IL_23992.1 | |
| IL_4V7R_119 | 1/B1/527:529, 1/B1/563:565 | No text annotation Not in a motif group | ||
| IL_4V7R_120 | 1/B1/530:536, 1/B1/557:562 | No text annotation Not in a motif group | ||
| IL_4V7R_121 | 1/B1/536:539, 1/B1/552:557 | No text annotation Not in a motif group | ||
| IL_4V7R_122 | 1/B1/668:670, 1/B1/792:794 | No text annotation Not in a motif group | homologous IL_8C3A_023 IL_86319.2 | |
| IL_4V7R_123 | 1/B1/681:684, 1/B1/696:699 | No text annotation Not in a motif group | ||
| IL_4V7R_125 | 1/B1/725:729, 1/B1/740:745 | No text annotation Not in a motif group | ||
| IL_4V7R_126 | 1/B1/752:753, 1/B1/779:781 | Single stack bend Not in a motif group | geometric IL_5J7L_032 IL_76488.4 | |
| IL_4V7R_127 | 1/B1/753:755, 1/B1/777:779 | UU cWW Not in a motif group | geometric IL_4ZC7_004 IL_86319.2 | |
| IL_4V7R_128 | 1/B1/755:756, 1/B1/775:777 | Single stack bend Not in a motif group | geometric IL_5VSU_003 IL_76488.4 | |
| IL_4V7R_129 | 1/B1/757:762, 1/B1/769:774 | No text annotation Not in a motif group | ||
| IL_4V7R_130 | 1/B1/803:805, 1/B1/938:940 | No text annotation Not in a motif group | homologous IL_5TBW_027 IL_86319.2 | |
| IL_4V7R_131 | 1/B1/805:809, 1/B1/931:938 | No text annotation Not in a motif group | homologous IL_8C3A_030 IL_17470.6 | |
| IL_4V7R_132 | 1/B1/824:826, 1/B1/899:901 | No text annotation Not in a motif group | geometric IL_4E48_003 IL_86319.2 | |
| IL_4V7R_133 | 1/B1/833:834, 1/B1/859:861 | Single bulged G Not in a motif group | geometric IL_5TBW_029 IL_00225.3 | |
| IL_4V7R_134 | 1/B1/834:838, 1/B1/855:859 | Triple sheared Not in a motif group | homologous IL_5TBW_030 IL_56467.8 | |
| IL_4V7R_135 | 1/B1/869:872, 1/B1/888:890 | No text annotation Not in a motif group | homologous IL_8C3A_034 IL_05564.2 | |
| IL_4V7R_136 | 1/B1/873:875, 1/B1/886:887 | Single bulged U Not in a motif group | homologous IL_5TBW_032 IL_83039.16 | |
| IL_4V7R_137 | 1/B1/907:909, 1/B1/919:923 | No text annotation Not in a motif group | homologous IL_8C3A_036 IL_90991.6 | |
| IL_4V7R_138 | 1/B1/954:956, 1/B1/965:967 | No text annotation Not in a motif group | homologous IL_5TBW_034 IL_86319.2 | |
| IL_4V7R_139 | 1/B1/969:970, 1/B1/1111:1113 | Single stack bend Not in a motif group | homologous IL_5TBW_035 IL_76488.4 | |
| IL_4V7R_140 | 1/B1/976:981, 1/B1/1102:1105 | No text annotation Not in a motif group | ||
| IL_4V7R_141 | 1/B1/983:985, 1/B1/1099:1100 | No text annotation Not in a motif group | homologous IL_8C3A_040 IL_00225.3 | |
| IL_4V7R_142 | 1/B1/991:997, 1/B1/1052:1058 | 7x7 Sarcin-Ricin with intercalated A; G-bulge Not in a motif group | geometric IL_5TBW_038 IL_93830.3 | |
| IL_4V7R_143 | 1/B1/997:998, 1/B1/1050:1052 | Minor groove platform Not in a motif group | homologous IL_5TBW_039 IL_42622.4 | |
| IL_4V7R_144 | 1/B1/999:1005, 1/B1/1045:1049 | No text annotation Not in a motif group | geometric IL_4V9F_035 IL_21121.1 | |
| IL_4V7R_145 | 1/B1/1006:1009, 1/B1/1041:1044 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_3R2D_002 IL_30621.4 | |
| IL_4V7R_146 | 1/B1/1009:1012, 1/B1/1038:1041 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_6CZR_168 IL_67743.1 | |
| IL_4V7R_147 | 1/B1/1013:1015, 1/B1/1036:1037 | Single bulged U Not in a motif group | geometric IL_4WF9_038 IL_83039.16 | |
| IL_4V7R_148 | 1/B1/1015:1017, 1/B1/1035:1036 | Single stack bend Not in a motif group | geometric IL_4V83_236 IL_76488.4 | |
| IL_4V7R_149 | 1/B1/1017:1019, 1/B1/1033:1035 | No text annotation Not in a motif group | geometric IL_1NBS_006 IL_86319.2 | |
| IL_4V7R_150 | 1/B1/1019:1021, 1/B1/1031:1033 | No text annotation Not in a motif group | geometric IL_5J7L_273 IL_86319.2 | |
| IL_4V7R_151 | 1/B1/1069:1071, 1/B1/1087:1089 | No text annotation Not in a motif group | homologous IL_8C3A_047 IL_86319.2 | |
| IL_4V7R_152 | 1/B1/1073:1076, 1/B1/1083:1085 | Isolated non-canonical cWW with bulges Not in a motif group | geometric IL_4V9F_097 IL_43275.1 | |
| IL_4V7R_153 | 1/B1/1120:1122, 1/B1/1136:1138 | No text annotation Not in a motif group | homologous IL_5TBW_046 IL_86319.2 | |
| IL_4V7R_154 | 1/B1/1167:1171, 1/B1/1328:1332 | UAA/GAN Not in a motif group | homologous IL_5TBW_048 IL_89002.2 | |
| IL_4V7R_155 | 1/B1/1173:1180, 1/B1/1325:1326 | SSU/LSU pseudoknot Not in a motif group | homologous IL_5TBW_049 IL_15861.7 | |
| IL_4V7R_156 | 1/B1/1180:1182, 1/B1/1324:1325 | Single bulged U Not in a motif group | geometric IL_5TBW_050 IL_83039.16 | |
| IL_4V7R_157 | 1/B1/1187:1205, 1/B1/1299:1319 | No text annotation Not in a motif group | ||
| IL_4V7R_158 | 1/B1/1207:1209, 1/B1/1296:1297 | No text annotation Not in a motif group | homologous IL_8C3A_056 IL_83039.16 | |
| IL_4V7R_159 | 1/B1/1210:1212, 1/B1/1293:1295 | No text annotation Not in a motif group | geometric IL_2ZKO_001 IL_86319.2 | |
| IL_4V7R_160 | 1/B1/1218:1226, 1/B1/1283:1287 | No text annotation Not in a motif group | ||
| IL_4V7R_161 | 1/B1/1234:1238, 1/B1/1250:1254 | No text annotation Not in a motif group | ||
| IL_4V7R_162 | 1/B1/1262:1266, 1/B1/1275:1277 | No text annotation Not in a motif group | ||
| IL_4V7R_163 | 1/B1/1376:1378, 1/B1/1428:1431 | No text annotation Not in a motif group | homologous IL_8C3A_061 IL_52767.4 | |
| IL_4V7R_164 | 1/B1/1385:1387, 1/B1/1420:1421 | Single bulged A Not in a motif group | homologous IL_5TBW_058 IL_37497.6 | |
| IL_4V7R_165 | 1/B1/1388:1396, 1/B1/1414:1419 | No text annotation Not in a motif group | ||
| IL_4V7R_166 | 1/B1/1398:1400, 1/B1/1411:1412 | Single bulged A Not in a motif group | homologous IL_5TBW_060 IL_37497.6 | |
| IL_4V7R_167 | 1/B1/1444:1451, 1/B1/2353:2359 | 8x7 Sarcin-Ricin with CC bifurcated pair; G-bulge Not in a motif group | geometric IL_4V9F_012 IL_59724.1 | |
| IL_4V7R_168 | 1/B1/1492:1495, 1/B1/1835:1836 | Major groove platform; stack outside cWW Not in a motif group | geometric IL_7RQB_050 IL_50694.2 | |
| IL_4V7R_169 | 1/B1/1501:1505, 1/B1/1513:1515 | C-loop Not in a motif group | geometric IL_7RQB_051 IL_63596.6 | |
| IL_4V7R_170 | 1/B1/1532:1536, 1/B1/1585:1590 | UAA/GAN Not in a motif group | homologous IL_5TBW_063 IL_89002.2 | |
| IL_4V7R_171 | 1/B1/1618:1620, 1/B1/1825:1826 | Single stack bend Not in a motif group | geometric IL_5TBW_009 IL_76488.4 | |
| IL_4V7R_172 | 1/B1/1623:1625, 1/B1/1820:1822 | No text annotation Not in a motif group | ||
| IL_4V7R_173 | 1/B1/1625:1628, 1/B1/1817:1820 | No text annotation Not in a motif group | ||
| IL_4V7R_174 | 1/B1/1628:1631, 1/B1/1811:1817 | No text annotation Not in a motif group | ||
| IL_4V7R_175 | 1/B1/1645:1649, 1/B1/1806:1810 | Triple sheared Not in a motif group | homologous IL_5TBW_067 IL_56467.8 | |
| IL_4V7R_176 | 1/B1/1661:1663, 1/B1/1786:1788 | No text annotation Not in a motif group | homologous IL_8C3A_074 IL_86319.2 | |
| IL_4V7R_177 | 1/B1/1669:1670, 1/B1/1778:1780 | No text annotation Not in a motif group | ||
| IL_4V7R_178 | 1/B1/1670:1671, 1/B1/1776:1778 | Single stack bend Not in a motif group | geometric IL_5J7L_249 IL_76488.4 | |
| IL_4V7R_179 | 1/B1/1694:1698, 1/B1/1747:1752 | No text annotation Not in a motif group | homologous IL_5TBW_071 IL_69313.1 | |
| IL_4V7R_180 | 1/B1/1702:1707, 1/B1/1737:1743 | No text annotation Not in a motif group | homologous IL_8C3A_078 IL_39753.1 | |
| IL_4V7R_181 | 1/B1/1711:1717, 1/B1/1727:1733 | Kink-turn Not in a motif group | homologous IL_5TBW_073 IL_60192.2 | |
| IL_4V7R_182 | 1/B1/1883:1889, 1/B1/2346:2349 | No text annotation Not in a motif group | homologous IL_5TBW_074 IL_49460.2 | |
| IL_4V7R_183 | 1/B1/1895:1897, 1/B1/2338:2340 | Isolated tWW turn Not in a motif group | homologous IL_5TBW_075 IL_54997.7 | |
| IL_4V7R_184 | 1/B1/1898:1901, 1/B1/2336:2337 | Major groove platform; stack outside cWW Not in a motif group | geometric IL_5TBW_076 IL_50694.2 | |
| IL_4V7R_185 | 1/B1/1901:1906, 1/B1/2333:2336 | Intercalated tWH Not in a motif group | homologous IL_5TBW_077 IL_76273.1 | |
| IL_4V7R_186 | 1/B1/1918:1923, 1/B1/1928:1934 | tSH-tSH-tHH-tHS Not in a motif group | geometric IL_5J7L_308 IL_65969.2 | |
| IL_4V7R_187 | 1/B1/1940:1942, 1/B1/2106:2108 | No text annotation Not in a motif group | homologous IL_5TBW_079 IL_86319.2 | |
| IL_4V7R_188 | 1/B1/1947:1948, 1/B1/2098:2101 | No text annotation Not in a motif group | homologous IL_8C3A_086 IL_74125.1 | |
| IL_4V7R_190 | 1/B1/2128:2129, 1/B1/2323:2325 | No text annotation Not in a motif group | homologous IL_8C3A_087 IL_37497.6 | |
| IL_4V7R_191 | 1/B1/2156:2161, 1/B1/2173:2180 | Kink-turn related Not in a motif group | homologous IL_5TBW_083 IL_64509.1 | |
| IL_4V7R_192 | 1/B1/2196:2199, 1/B1/2245:2246 | Major groove outside cWW, minor groove, intercalation pocket Not in a motif group | homologous IL_5TBW_084 IL_88739.3 | |
| IL_4V7R_193 | 1/B1/2200:2201, 1/B1/2241:2244 | No text annotation Not in a motif group | homologous IL_8C3A_090 IL_16396.2 | |
| IL_4V7R_194 | 1/B1/2204:2206, 1/B1/2237:2238 | No text annotation Not in a motif group | ||
| IL_4V7R_195 | 1/B1/2206:2210, 1/B1/2235:2237 | No text annotation Not in a motif group | ||
| IL_4V7R_196 | 1/B1/2211:2217, 1/B1/2228:2234 | No text annotation Not in a motif group | homologous IL_5TBW_088 IL_36973.6 | |
| IL_4V7R_197 | 1/B1/2250:2251, 1/B1/2265:2267 | Single stack bend Not in a motif group | geometric IL_4C7O_002 IL_76488.4 | |
| IL_4V7R_198 | 1/B1/2276:2277, 1/B1/2307:2310 | No text annotation Not in a motif group | homologous IL_8C3A_094 IL_59677.2 | |
| IL_4V7R_199 | 1/B1/2277:2288, 1/B1/2304:2307 | No text annotation Not in a motif group | homologous IL_8C3A_095 IL_81589.2 | |
| IL_4V7R_200 | 1/B1/2391:2394, 1/B1/2986:2988 | No text annotation Not in a motif group | homologous IL_8C3A_096 IL_63450.2 | |
| IL_4V7R_201 | 1/B1/2396:2398, 1/B1/2981:2984 | Minor groove platform with intercalation Not in a motif group | homologous IL_5TBW_092 IL_54678.5 | |
| IL_4V7R_202 | 1/B1/2409:2411, 1/B1/2811:2812 | No text annotation Not in a motif group | homologous IL_8C3A_098 IL_83039.16 | |
| IL_4V7R_203 | 1/B1/2412:2413, 1/B1/2807:2810 | No text annotation Not in a motif group | homologous IL_8C3A_099 IL_42622.4 | |
| IL_4V7R_204 | 1/B1/2422:2425, 1/B1/2604:2608 | No text annotation Not in a motif group | ||
| IL_4V7R_205 | 1/B1/2436:2438, 1/B1/2509:2511 | Isolated cWH basepair Not in a motif group | geometric IL_3R1D_002 IL_70707.2 | |
| IL_4V7R_206 | 1/B1/2440:2442, 1/B1/2505:2507 | No text annotation Not in a motif group | geometric IL_1YZ9_001 IL_86319.2 | |
| IL_4V7R_207 | 1/B1/2444:2447, 1/B1/2499:2503 | No text annotation Not in a motif group | ||
| IL_4V7R_208 | 1/B1/2450:2462, 1/B1/2493:2496 | No text annotation Not in a motif group | ||
| IL_4V7R_209 | 1/B1/2466:2469, 1/B1/2476:2489 | No text annotation Not in a motif group | ||
| IL_4V7R_210 | 1/B1/2520:2526, 1/B1/2584:2587 | No text annotation Not in a motif group | ||
| IL_4V7R_211 | 1/B1/2614:2615, 1/B1/2625:2627 | No text annotation Not in a motif group | homologous IL_8C3A_107 IL_69996.1 | |
| IL_4V7R_212 | 1/B1/2666:2668, 1/B1/2686:2690 | No text annotation Not in a motif group | ||
| IL_4V7R_213 | 1/B1/2718:2721, 1/B1/2735:2738 | No text annotation Not in a motif group | homologous IL_8C3A_109 IL_30621.4 | |
| IL_4V7R_214 | 1/B1/2770:2773, 1/B1/2787:2788 | Single stack bend with bulge Not in a motif group | homologous IL_5TBW_101 IL_76488.4 | |
| IL_4V7R_215 | 1/B1/2823:2824, 1/B1/2865:2867 | Major groove platform Not in a motif group | geometric IL_7A0S_073 IL_27635.3 | |
| IL_4V7R_216 | 1/B1/2824:2826, 1/B1/2863:2865 | No text annotation Not in a motif group | geometric IL_5TBW_021 IL_86319.2 | |
| IL_4V7R_217 | 1/B1/2826:2828, 1/B1/2862:2863 | Major groove platform Not in a motif group | homologous IL_5TBW_104 IL_76223.2 | |
| IL_4V7R_218 | 1/B1/2828:2830, 1/B1/2858:2862 | No text annotation Not in a motif group | homologous IL_8C3A_113 IL_92788.2 | |
| IL_4V7R_219 | 1/B1/2832:2835, 1/B1/2853:2856 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_402D_001 IL_30621.4 | |
| IL_4V7R_220 | 1/B1/2835:2839, 1/B1/2849:2853 | Triple sheared Not in a motif group | homologous IL_5TBW_106 IL_56467.8 | |
| IL_4V7R_221 | 1/B1/2876:2877, 1/B1/2949:2951 | No text annotation Not in a motif group | homologous IL_8C3A_115 IL_76223.2 | |
| IL_4V7R_222 | 1/B1/2879:2881, 1/B1/2943:2947 | Isolated non-canonical cWW with bulges Not in a motif group | geometric IL_5TBW_108 IL_90933.2 | |
| IL_4V7R_223 | 1/B1/2881:2882, 1/B1/2940:2943 | Multiple bulged bases Not in a motif group | homologous IL_5TBW_109 IL_71530.2 | |
| IL_4V7R_224 | 1/B1/2889:2891, 1/B1/2912:2914 | No text annotation Not in a motif group | homologous IL_8C3A_118 IL_86319.2 | |
| IL_4V7R_225 | 1/B1/2891:2892, 1/B1/2909:2912 | Minor groove platform with intercalation Not in a motif group | geometric IL_5TBW_111 IL_95601.3 | |
| IL_4V7R_226 | 1/B1/2918:2920, 1/B1/2926:2928 | No text annotation Not in a motif group | homologous IL_8C3A_120 IL_86319.2 | |
| IL_4V7R_227 | 1/B1/2960:2961, 1/B1/2970:2972 | Single bulged A Not in a motif group | geometric IL_2VPL_002 IL_37497.6 | |
| IL_4V7R_228 | 1/B1/3003:3007, 1/B1/3139:3145 | No text annotation Not in a motif group | ||
| IL_4V7R_229 | 1/B1/3018:3025, 1/B1/3030:3036 | 8x7 Sarcin-Ricin; G-bulge Not in a motif group | geometric IL_5TBW_116 IL_04346.7 | |
| IL_4V7R_230 | 1/B1/3047:3051, 1/B1/3091:3094 | Major groove minor groove platform with tHH Not in a motif group | homologous IL_5TBW_117 IL_37712.2 | |
| IL_4V7R_231 | 1/B1/3054:3059, 1/B1/3084:3088 | No text annotation Not in a motif group | homologous IL_8C3A_127 IL_17136.1 | |
| IL_4V7R_232 | 1/B1/3063:3064, 1/B1/3077:3080 | Multiple bulged bases Not in a motif group | homologous IL_5TBW_119 IL_71530.2 | |
| IL_4V7R_233 | 1/B1/3103:3107, 1/B1/3127:3131 | UAA/GAN Not in a motif group | homologous IL_5TBW_120 IL_89002.2 | |
| IL_4V7R_234 | 1/B1/3159:3161, 1/B1/3289:3291 | No text annotation Not in a motif group | geometric IL_3GM7_006 IL_86319.2 | |
| IL_4V7R_235 | 1/B1/3164:3166, 1/B1/3284:3286 | No text annotation Not in a motif group | homologous IL_8C3A_130 IL_86319.2 | |
| IL_4V7R_236 | 1/B1/3168:3170, 1/B1/3280:3282 | No text annotation Not in a motif group | homologous IL_5TBW_122 IL_86319.2 | |
| IL_4V7R_237 | 1/B1/3177:3179, 1/B1/3209:3211 | Single stack bend Not in a motif group | geometric IL_5J7L_032 IL_76488.4 | |
| IL_4V7R_238 | 1/B1/3221:3223, 1/B1/3262:3264 | UU cWW Not in a motif group | geometric IL_1ZZ5_002 IL_70707.2 | |
| IL_4V7R_240 | 1/B1/3227:3230, 1/B1/3257:3258 | No text annotation Not in a motif group | ||
| IL_4V7R_241 | 1/B1/3233:3235, 1/B1/3252:3254 | No text annotation Not in a motif group | homologous IL_5TBW_127 IL_86319.2 | |
| IL_4V7R_242 | 1/B1/3235:3238, 1/B1/3249:3252 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_7A0S_040 IL_30621.4 | |
| IL_4V7R_243 | 1/B1/3296:3297, 1/B1/3391:3393 | Single stack bend Not in a motif group | geometric IL_4V9F_005 IL_76488.4 | |
| IL_4V7R_244 | 1/B1/3300:3303, 1/B1/3311:3314 | No text annotation Not in a motif group | homologous IL_8C3A_135 IL_30621.4 | |
| IL_4V7R_246 | 1/B1/3324:3325, 1/B1/3380:3383 | Single stack bend Not in a motif group | geometric IL_7A0S_054 IL_76488.4 | |
| IL_4V7R_247 | 1/B1/3327:3330, 1/B1/3373:3378 | No text annotation Not in a motif group | ||
| IL_4V7R_248 | 1/B1/3331:3336, 1/B1/3368:3372 | No text annotation Not in a motif group | homologous IL_5TBW_133 IL_83162.5 | |
| IL_4V7R_249 | 1/B1/3340:3345, 1/B1/3360:3364 | No text annotation Not in a motif group | ||
| IL_4V7R_250 | 1/B2/15:16, 1/B2/63:65 | No text annotation Not in a motif group | ||
| IL_4V7R_251 | 1/B2/21:27, 1/B2/53:58 | No text annotation Not in a motif group | homologous IL_5TBW_373 IL_10207.2 | |
| IL_4V7R_252 | 1/B2/72:80, 1/B2/100:106 | No text annotation Not in a motif group | ||
| IL_4V7R_253 | 1/B2/84:87, 1/B2/94:96 | No text annotation Not in a motif group | homologous IL_5TBW_378 IL_86319.2 | |
| IL_4V7R_254 | 1/B3/64:67, 1/B3/92:96 | No text annotation Not in a motif group | geometric IL_6AZ4_001 IL_69145.1 | |
| IL_4V7R_255 | 1/C1/24:27, 1/C1/599:601 | No text annotation Not in a motif group | ||
| IL_4V7R_256 | 1/C1/28:30, 1/C1/596:598 | No text annotation Not in a motif group | geometric IL_1L9A_003 IL_70707.2 | |
| IL_4V7R_257 | 1/C1/35:37, 1/C1/471:473 | No text annotation Not in a motif group | geometric IL_2O3Y_001 IL_86319.2 | |
| IL_4V7R_258 | 1/C1/37:41, 1/C1/466:471 | No text annotation Not in a motif group | homologous IL_4V88_386 IL_41507.1 | |
| IL_4V7R_259 | 1/C1/42:48, 1/C1/431:433 | No text annotation Not in a motif group | homologous IL_4V88_387 IL_33912.1 | |
| IL_4V7R_260 | 1/C1/50:52, 1/C1/428:429 | Minor groove platform Not in a motif group | homologous IL_4V88_388 IL_80097.1 | |
| IL_4V7R_261 | 1/C1/57:62, 1/C1/88:90 | No text annotation Not in a motif group | ||
| IL_4V7R_262 | 1/C1/64:70, 1/C1/83:86 | No text annotation Not in a motif group | ||
| IL_4V7R_263 | 1/C1/109:112, 1/C1/302:305 | Tandem non-canonical cWW pairs Not in a motif group | homologous IL_4V88_391 IL_30621.4 | |
| IL_4V7R_264 | 1/C1/113:116, 1/C1/300:301 | Multiple bulged bases Not in a motif group | homologous IL_4V88_392 IL_44546.1 | |
| IL_4V7R_265 | 1/C1/117:122, 1/C1/295:299 | No text annotation Not in a motif group | homologous IL_4V88_393 IL_64181.2 | |
| IL_4V7R_266 | 1/C1/143:149, 1/C1/165:172 | tWH-tWH-tHW-tHW Not in a motif group | homologous IL_4V88_394 IL_80604.2 | |
| IL_4V7R_267 | 1/C1/150:152, 1/C1/162:164 | No text annotation Not in a motif group | homologous IL_4V88_395 IL_76273.1 | |
| IL_4V7R_268 | 1/C1/185:189, 1/C1/196:200 | Triple sheared Not in a motif group | geometric IL_1U6B_002 IL_56467.8 | |
| IL_4V7R_269 | 1/C1/206:208, 1/C1/257:259 | No text annotation Not in a motif group | homologous IL_4V88_398 IL_86319.2 | |
| IL_4V7R_270 | 1/C1/270:272, 1/C1/284:285 | No text annotation Not in a motif group | ||
| IL_4V7R_271 | 1/C1/311:316, 1/C1/348:355 | Kink-turn with non-sequential stacking Not in a motif group | homologous IL_4V88_402 IL_45067.2 | |
| IL_4V7R_272 | 1/C1/318:323, 1/C1/345:346 | No text annotation Not in a motif group | geometric IL_5Y58_001 IL_48100.2 | |
| IL_4V7R_273 | 1/C1/364:365, 1/C1/376:380 | No text annotation Not in a motif group | ||
| IL_4V7R_274 | 1/C1/389:391, 1/C1/406:408 | Isolated cWH basepair Not in a motif group | homologous IL_4V88_405 IL_70707.2 | |
| IL_4V7R_275 | 1/C1/411:413, 1/C1/420:422 | Isolated near basepair Not in a motif group | homologous IL_4V88_406 IL_52767.4 | |
| IL_4V7R_276 | 1/C1/439:441, 1/C1/463:464 | Single bulged U Not in a motif group | homologous IL_4V88_407 IL_83039.16 | |
| IL_4V7R_277 | 1/C1/443:447, 1/C1/460:461 | C-loop Not in a motif group | geometric IL_4LFB_015 IL_75255.1 | |
| IL_4V7R_278 | 1/C1/447:448, 1/C1/458:460 | Single bulged G Not in a motif group | geometric IL_5J7L_019 IL_00225.3 | |
| IL_4V7R_279 | 1/C1/479:481, 1/C1/507:509 | No text annotation Not in a motif group | ||
| IL_4V7R_280 | 1/C1/482:483, 1/C1/504:506 | Single bulged A Not in a motif group | geometric IL_5WWT_001 IL_37497.6 | |
| IL_4V7R_281 | 1/C1/485:487, 1/C1/500:502 | No text annotation Not in a motif group | geometric IL_4V88_448 IL_27844.2 | |
| IL_4V7R_282 | 1/C1/487:490, 1/C1/497:500 | No text annotation Not in a motif group | ||
| IL_4V7R_283 | 1/C1/517:520, 1/C1/532:535 | No text annotation Not in a motif group | ||
| IL_4V7R_284 | 1/C1/520:523, 1/C1/530:532 | No text annotation Not in a motif group | ||
| IL_4V7R_285 | 1/C1/550:559, 1/C1/586:588 | No text annotation Not in a motif group | geometric IL_4V88_470 IL_70707.2 | |
| IL_4V7R_286 | 1/C1/562:568, 1/C1/575:583 | No text annotation Not in a motif group | homologous IL_4V88_415 IL_55871.1 | |
| IL_4V7R_287 | 1/C1/624:626, 1/C1/973:975 | No text annotation Not in a motif group | homologous IL_4V88_417 IL_86319.2 | |
| IL_4V7R_288 | 1/C1/627:631, 1/C1/968:972 | tSH-tHW-tHS Not in a motif group | homologous IL_4V88_418 IL_17136.1 | |
| IL_4V7R_290 | 1/C1/646:648, 1/C1/686:688 | No text annotation Not in a motif group | homologous IL_4V88_419 IL_86319.2 | |
| IL_4V7R_292 | 1/C1/703:708, 1/C1/730:735 | No text annotation Not in a motif group | geometric IL_4V88_421 IL_86929.2 | |
| IL_4V7R_293 | 1/C1/708:712, 1/C1/726:730 | No text annotation Not in a motif group | homologous IL_4V88_422 IL_05145.2 | |
| IL_4V7R_294 | 1/C1/746:747, 1/C1/802:805 | Major groove minor groove platform; mini C-loop Not in a motif group | homologous IL_4V88_423 IL_09061.8 | |
| IL_4V7R_295 | 1/C1/748:750, 1/C1/799:801 | No text annotation Not in a motif group | homologous IL_4V88_424 IL_86319.2 | |
| IL_4V7R_296 | 1/C1/751:759, 1/C1/791:798 | No text annotation Not in a motif group | homologous IL_4V88_425 IL_69091.1 | |
| IL_4V7R_297 | 1/C1/821:827, 1/C1/845:850 | No text annotation Not in a motif group | ||
| IL_4V7R_298 | 1/C1/865:866, 1/C1/962:965 | Major groove platform; stack outside cWW Not in a motif group | homologous IL_4V88_428 IL_50694.2 | |
| IL_4V7R_299 | 1/C1/868:869, 1/C1/958:960 | No text annotation Not in a motif group | ||
| IL_4V7R_300 | 1/C1/871:874, 1/C1/953:956 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_4V88_430 IL_30621.4 | |
| IL_4V7R_301 | 1/C1/874:878, 1/C1/950:953 | Tandem non-canonical cWW pairs Not in a motif group | homologous IL_4V88_431 IL_30621.4 | |
| IL_4V7R_302 | 1/C1/885:888, 1/C1/924:927 | Tandem non-canonical cWW pairs Not in a motif group | homologous IL_4V88_432 IL_30621.4 | |
| IL_4V7R_303 | 1/C1/893:899, 1/C1/910:919 | No text annotation Not in a motif group | homologous IL_8C3A_440 IL_22252.1 | |
| IL_4V7R_304 | 1/C1/985:990, 1/C1/1014:1016 | Other IL Not in a motif group | geometric IL_4V88_435 IL_22046.1 | |
| IL_4V7R_305 | 1/C1/990:994, 1/C1/1010:1014 | tSH-tHW-tHS Not in a motif group | homologous IL_4V88_436 IL_17136.1 | |
| IL_4V7R_306 | 1/C1/995:997, 1/C1/1007:1009 | No text annotation Not in a motif group | geometric IL_4P3U_012 IL_86319.2 | |
| IL_4V7R_307 | 1/C1/1034:1036, 1/C1/1095:1101 | Isolated cWH basepair Not in a motif group | geometric IL_2W2H_002 IL_19557.3 | |
| IL_4V7R_308 | 1/C1/1042:1045, 1/C1/1073:1077 | No text annotation Not in a motif group | ||
| IL_4V7R_309 | 1/C1/1051:1053, 1/C1/1066:1067 | No text annotation Not in a motif group | ||
| IL_4V7R_310 | 1/C1/1111:1118, 1/C1/1129:1134 | 8x6 Sarcin-Ricin with inserted Y; G-bulge Not in a motif group | homologous IL_4V88_440 IL_24606.2 | |
| IL_4V7R_311 | 1/C1/1145:1147, 1/C1/1630:1633 | No text annotation Not in a motif group | ||
| IL_4V7R_312 | 1/C1/1148:1151, 1/C1/1627:1629 | Minor groove platform with extra cWW Not in a motif group | geometric IL_7RQB_031 IL_46796.1 | |
| IL_4V7R_313 | 1/C1/1157:1160, 1/C1/1617:1621 | No text annotation Not in a motif group | ||
| IL_4V7R_314 | 1/C1/1173:1175, 1/C1/1464:1466 | No text annotation Not in a motif group | homologous IL_4V88_444 IL_86319.2 | |
| IL_4V7R_315 | 1/C1/1178:1179, 1/C1/1459:1461 | Minor groove platform Not in a motif group | homologous IL_4V88_445 IL_42622.4 | |
| IL_4V7R_316 | 1/C1/1213:1215, 1/C1/1448:1450 | No text annotation Not in a motif group | homologous IL_4V88_446 IL_86319.2 | |
| IL_4V7R_317 | 1/C1/1224:1233, 1/C1/1252:1259 | No text annotation Not in a motif group | ||
| IL_4V7R_318 | 1/C1/1234:1236, 1/C1/1249:1251 | No text annotation Not in a motif group | homologous IL_4V88_448 IL_27844.2 | |
| IL_4V7R_319 | 1/C1/1268:1270, 1/C1/1440:1441 | Single bulged U Not in a motif group | homologous IL_4V88_449 IL_83039.16 | |
| IL_4V7R_320 | 1/C1/1272:1275, 1/C1/1437:1438 | Multiple bulged bases Not in a motif group | geometric IL_1FUF_002 IL_16396.2 | |
| IL_4V7R_321 | 1/C1/1276:1278, 1/C1/1430:1436 | Minor groove platform with extra cWW Not in a motif group | homologous IL_4V88_451 IL_92788.2 | |
| IL_4V7R_322 | 1/C1/1280:1281, 1/C1/1426:1428 | Single bulged A Not in a motif group | homologous IL_4V88_452 IL_37497.6 | |
| IL_4V7R_323 | 1/C1/1290:1292, 1/C1/1323:1325 | Isolated cWH basepair Not in a motif group | homologous IL_4V88_453 IL_70707.2 | |
| IL_4V7R_324 | 1/C1/1294:1296, 1/C1/1301:1303 | UU cWW Not in a motif group | geometric IL_3SZX_003 IL_86319.2 | |
| IL_4V7R_325 | 1/C1/1340:1342, 1/C1/1383:1384 | Single bulged A Not in a motif group | geometric IL_5TBW_113 IL_37497.6 | |
| IL_4V7R_326 | 1/C1/1344:1348, 1/C1/1377:1381 | No text annotation Not in a motif group | ||
| IL_4V7R_328 | 1/C1/1352:1354, 1/C1/1369:1373 | No text annotation Not in a motif group | ||
| IL_4V7R_329 | 1/C1/1355:1357, 1/C1/1366:1368 | No text annotation Not in a motif group | geometric IL_1Y27_001 IL_70707.2 | |
| IL_4V7R_330 | 1/C1/1389:1391, 1/C1/1407:1412 | Major groove platform; stack outside cWW Not in a motif group | homologous IL_4V88_458 IL_58032.1 | |
| IL_4V7R_331 | 1/C1/1480:1487, 1/C1/1519:1527 | No text annotation Not in a motif group | ||
| IL_4V7R_332 | 1/C1/1488:1494, 1/C1/1513:1518 | No text annotation Not in a motif group | ||
| IL_4V7R_333 | 1/C1/1495:1498, 1/C1/1509:1512 | Tandem non-canonical cWW pairs Not in a motif group | homologous IL_4V88_461 IL_30621.4 | |
| IL_4V7R_334 | 1/C1/1498:1500, 1/C1/1507:1509 | No text annotation Not in a motif group | geometric IL_1NBS_006 IL_86319.2 | |
| IL_4V7R_335 | 1/C1/1540:1545, 1/C1/1566:1571 | No text annotation Not in a motif group | homologous IL_4V88_462 IL_19954.2 | |
| IL_4V7R_336 | 1/C1/1636:1638, 1/C1/1764:1767 | No text annotation Not in a motif group | homologous IL_4V88_463 IL_36143.3 | |
| IL_4V7R_337 | 1/C1/1638:1641, 1/C1/1760:1764 | No text annotation Not in a motif group | geometric IL_4V88_464 IL_99670.1 | |
| IL_4V7R_338 | 1/C1/1642:1644, 1/C1/1757:1759 | No text annotation Not in a motif group | homologous IL_4V88_465 IL_86319.2 | |
| IL_4V7R_339 | 1/C1/1644:1647, 1/C1/1753:1757 | Non canonical cWW and near pair Not in a motif group | geometric IL_4V88_466 IL_42334.1 | |
| IL_4V7R_340 | 1/C1/1650:1652, 1/C1/1748:1750 | AA cWW Not in a motif group | homologous IL_4V88_467 IL_86319.2 | |
| IL_4V7R_341 | 1/C1/1653:1656, 1/C1/1744:1747 | Double sheared Not in a motif group | homologous IL_4V88_468 IL_09705.10 | |
| IL_4V7R_342 | 1/C1/1656:1658, 1/C1/1743:1744 | No text annotation Not in a motif group | ||
| IL_4V7R_343 | 1/C1/1665:1667, 1/C1/1734:1736 | No text annotation Not in a motif group | homologous IL_4V88_470 IL_70707.2 | |
| IL_4V7R_344 | 1/C1/1669:1672, 1/C1/1729:1732 | Double sheared Not in a motif group | geometric IL_4V88_471 IL_09705.10 | |
| IL_4V7R_345 | 1/C1/1672:1674, 1/C1/1727:1729 | No text annotation Not in a motif group | homologous IL_4V88_472 IL_86319.2 | |
| IL_4V7R_346 | 1/D1/12:16, 1/D3/143:146 | No text annotation Not in a motif group | ||
| IL_4V7R_347 | 1/D1/18:20, 1/D3/139:141 | No text annotation Not in a motif group | geometric IL_4JGN_004 IL_86319.2 | |
| IL_4V7R_348 | 1/D1/27:28, 1/D1/56:58 | Single stack bend Not in a motif group | homologous IL_5TBW_004 IL_76488.4 | |
| IL_4V7R_349 | 1/D1/32:38, 1/D1/45:52 | 8x7 Sarcin-Ricin; G-bulge Not in a motif group | geometric IL_4V9F_006 IL_04346.7 | |
| IL_4V7R_350 | 1/D1/82:89, 1/D1/97:103 | No text annotation Not in a motif group | homologous IL_5TBW_006 IL_88613.1 | |
| IL_4V7R_351 | 1/D1/117:122, 1/D1/146:151 | No text annotation Not in a motif group | ||
| IL_4V7R_352 | 1/D1/122:124, 1/D1/144:146 | Self complementary Not in a motif group | geometric IL_2D6F_001 IL_52767.4 | |
| IL_4V7R_353 | 1/D1/125:127, 1/D1/141:143 | No text annotation Not in a motif group | homologous IL_8C3A_008 IL_86319.2 | |
| IL_4V7R_354 | 1/D1/164:166, 1/D1/256:257 | Single stack bend Not in a motif group | homologous IL_5TBW_009 IL_76488.4 | |
| IL_4V7R_355 | 1/D1/169:171, 1/D1/247:253 | No text annotation Not in a motif group | ||
| IL_4V7R_356 | 1/D1/171:174, 1/D1/244:247 | No text annotation Not in a motif group | ||
| IL_4V7R_357 | 1/D1/176:178, 1/D1/238:242 | No text annotation Not in a motif group | ||
| IL_4V7R_358 | 1/D1/189:191, 1/D1/204:205 | Single bulged U Not in a motif group | homologous IL_5TBW_012 IL_83039.16 | |
| IL_4V7R_360 | 1/D1/337:339, 1/D3/25:26 | Single bulged A Not in a motif group | homologous IL_5TBW_013 IL_37497.6 | |
| IL_4V7R_361 | 1/D1/376:379, 1/D1/390:403 | No text annotation Not in a motif group | homologous IL_8C3A_015 IL_60992.6 | |
| IL_4V7R_362 | 1/D1/380:382, 1/D1/387:389 | No text annotation Not in a motif group | ||
| IL_4V7R_363 | 1/D1/404:410, 1/D3/13:19 | Triple sheared with non-canonical cWW Not in a motif group | geometric IL_5TBW_015 IL_66414.6 | |
| IL_4V7R_365 | 1/D1/429:431, 1/D1/628:630 | No text annotation Not in a motif group | homologous IL_5TBW_016 IL_70707.2 | |
| IL_4V7R_366 | 1/D1/435:437, 1/D1/623:624 | Single stack bend Not in a motif group | geometric IL_5J7L_269 IL_76488.4 | |
| IL_4V7R_368 | 1/D1/508:510, 1/D1/580:582 | Self complementary Not in a motif group | geometric IL_364D_004 IL_86319.2 | |
| IL_4V7R_369 | 1/D1/510:514, 1/D1/576:580 | No text annotation Not in a motif group | ||
| IL_4V7R_370 | 1/D1/517:525, 1/D1/567:573 | No text annotation Not in a motif group | homologous IL_5TBW_019 IL_23992.1 | |
| IL_4V7R_371 | 1/D1/527:529, 1/D1/563:565 | No text annotation Not in a motif group | ||
| IL_4V7R_372 | 1/D1/530:536, 1/D1/557:562 | No text annotation Not in a motif group | ||
| IL_4V7R_373 | 1/D1/536:539, 1/D1/552:557 | No text annotation Not in a motif group | ||
| IL_4V7R_374 | 1/D1/668:670, 1/D1/792:794 | No text annotation Not in a motif group | homologous IL_8C3A_023 IL_86319.2 | |
| IL_4V7R_375 | 1/D1/681:684, 1/D1/696:699 | No text annotation Not in a motif group | ||
| IL_4V7R_377 | 1/D1/725:729, 1/D1/740:745 | No text annotation Not in a motif group | ||
| IL_4V7R_378 | 1/D1/752:753, 1/D1/779:781 | Single stack bend Not in a motif group | geometric IL_5J7L_032 IL_76488.4 | |
| IL_4V7R_379 | 1/D1/753:755, 1/D1/777:779 | UU cWW Not in a motif group | geometric IL_4ZC7_004 IL_86319.2 | |
| IL_4V7R_380 | 1/D1/755:756, 1/D1/775:777 | No text annotation Not in a motif group | ||
| IL_4V7R_381 | 1/D1/757:762, 1/D1/769:774 | No text annotation Not in a motif group | ||
| IL_4V7R_382 | 1/D1/803:805, 1/D1/938:940 | No text annotation Not in a motif group | geometric IL_5TBW_027 IL_86319.2 | |
| IL_4V7R_383 | 1/D1/805:809, 1/D1/931:938 | No text annotation Not in a motif group | homologous IL_8C3A_030 IL_17470.6 | |
| IL_4V7R_384 | 1/D1/833:834, 1/D1/859:861 | Single bulged G Not in a motif group | geometric IL_5TBW_029 IL_00225.3 | |
| IL_4V7R_385 | 1/D1/834:838, 1/D1/855:859 | Triple sheared Not in a motif group | homologous IL_5TBW_030 IL_56467.8 | |
| IL_4V7R_386 | 1/D1/869:872, 1/D1/888:890 | No text annotation Not in a motif group | homologous IL_8C3A_034 IL_05564.2 | |
| IL_4V7R_387 | 1/D1/873:875, 1/D1/886:887 | Single bulged U Not in a motif group | homologous IL_5TBW_032 IL_83039.16 | |
| IL_4V7R_388 | 1/D1/907:909, 1/D1/919:923 | No text annotation Not in a motif group | homologous IL_8C3A_036 IL_90991.6 | |
| IL_4V7R_389 | 1/D1/954:956, 1/D1/965:967 | No text annotation Not in a motif group | homologous IL_5TBW_034 IL_86319.2 | |
| IL_4V7R_390 | 1/D1/969:970, 1/D1/1111:1113 | No text annotation Not in a motif group | homologous IL_8C3A_038 IL_76488.4 | |
| IL_4V7R_391 | 1/D1/976:981, 1/D1/1102:1105 | No text annotation Not in a motif group | ||
| IL_4V7R_392 | 1/D1/983:985, 1/D1/1099:1100 | No text annotation Not in a motif group | homologous IL_8C3A_040 IL_00225.3 | |
| IL_4V7R_393 | 1/D1/991:997, 1/D1/1052:1058 | 7x7 Sarcin-Ricin with intercalated A; G-bulge Not in a motif group | geometric IL_5TBW_038 IL_93830.3 | |
| IL_4V7R_394 | 1/D1/997:998, 1/D1/1050:1052 | Minor groove platform Not in a motif group | homologous IL_5TBW_039 IL_42622.4 | |
| IL_4V7R_395 | 1/D1/999:1005, 1/D1/1045:1049 | No text annotation Not in a motif group | geometric IL_4V9F_035 IL_21121.1 | |
| IL_4V7R_396 | 1/D1/1006:1009, 1/D1/1041:1044 | Tandem non-canonical cWW pairs Not in a motif group | homologous IL_5TBW_041 IL_30621.4 | |
| IL_4V7R_397 | 1/D1/1009:1012, 1/D1/1038:1041 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_6CZR_168 IL_67743.1 | |
| IL_4V7R_398 | 1/D1/1013:1015, 1/D1/1036:1037 | Single bulged U Not in a motif group | geometric IL_4WF9_038 IL_83039.16 | |
| IL_4V7R_399 | 1/D1/1015:1017, 1/D1/1035:1036 | Single stack bend Not in a motif group | geometric IL_4V83_236 IL_76488.4 | |
| IL_4V7R_400 | 1/D1/1017:1019, 1/D1/1033:1035 | No text annotation Not in a motif group | geometric IL_1NBS_006 IL_86319.2 | |
| IL_4V7R_401 | 1/D1/1019:1021, 1/D1/1031:1033 | No text annotation Not in a motif group | geometric IL_5J7L_273 IL_86319.2 | |
| IL_4V7R_402 | 1/D1/1069:1071, 1/D1/1087:1089 | No text annotation Not in a motif group | homologous IL_8C3A_047 IL_86319.2 | |
| IL_4V7R_403 | 1/D1/1073:1076, 1/D1/1083:1085 | No text annotation Not in a motif group | ||
| IL_4V7R_404 | 1/D1/1120:1122, 1/D1/1136:1138 | No text annotation Not in a motif group | homologous IL_5TBW_046 IL_86319.2 | |
| IL_4V7R_405 | 1/D1/1167:1171, 1/D1/1328:1332 | UAA/GAN Not in a motif group | homologous IL_5TBW_048 IL_89002.2 | |
| IL_4V7R_406 | 1/D1/1173:1180, 1/D1/1325:1326 | SSU/LSU pseudoknot Not in a motif group | homologous IL_5TBW_049 IL_15861.7 | |
| IL_4V7R_407 | 1/D1/1180:1182, 1/D1/1324:1325 | Single bulged U Not in a motif group | geometric IL_5TBW_050 IL_83039.16 | |
| IL_4V7R_408 | 1/D1/1187:1205, 1/D1/1299:1319 | No text annotation Not in a motif group | ||
| IL_4V7R_409 | 1/D1/1207:1209, 1/D1/1296:1297 | No text annotation Not in a motif group | homologous IL_8C3A_056 IL_83039.16 | |
| IL_4V7R_410 | 1/D1/1218:1226, 1/D1/1283:1287 | No text annotation Not in a motif group | ||
| IL_4V7R_411 | 1/D1/1234:1238, 1/D1/1250:1254 | No text annotation Not in a motif group | homologous IL_8C3A_058 IL_30542.3 | |
| IL_4V7R_412 | 1/D1/1262:1266, 1/D1/1275:1277 | No text annotation Not in a motif group | homologous IL_8C3A_059 IL_05564.2 | |
| IL_4V7R_413 | 1/D1/1376:1378, 1/D1/1428:1431 | No text annotation Not in a motif group | homologous IL_8C3A_061 IL_52767.4 | |
| IL_4V7R_414 | 1/D1/1385:1387, 1/D1/1420:1421 | Single bulged A Not in a motif group | homologous IL_5TBW_058 IL_37497.6 | |
| IL_4V7R_415 | 1/D1/1388:1395, 1/D1/1415:1419 | No text annotation Not in a motif group | ||
| IL_4V7R_416 | 1/D1/1398:1400, 1/D1/1411:1412 | Single bulged A Not in a motif group | homologous IL_5TBW_060 IL_37497.6 | |
| IL_4V7R_417 | 1/D1/1444:1451, 1/D1/2353:2359 | 8x7 Sarcin-Ricin with CC bifurcated pair; G-bulge Not in a motif group | geometric IL_4V9F_012 IL_59724.1 | |
| IL_4V7R_418 | 1/D1/1492:1495, 1/D1/1835:1836 | Major groove platform; stack outside cWW Not in a motif group | geometric IL_7RQB_050 IL_50694.2 | |
| IL_4V7R_419 | 1/D1/1501:1505, 1/D1/1513:1515 | C-loop Not in a motif group | geometric IL_7RQB_051 IL_63596.6 | |
| IL_4V7R_420 | 1/D1/1532:1536, 1/D1/1585:1590 | UAA/GAN Not in a motif group | homologous IL_5TBW_063 IL_89002.2 | |
| IL_4V7R_421 | 1/D1/1618:1620, 1/D1/1825:1826 | Single stack bend Not in a motif group | geometric IL_5TBW_009 IL_76488.4 | |
| IL_4V7R_422 | 1/D1/1623:1625, 1/D1/1820:1822 | No text annotation Not in a motif group | ||
| IL_4V7R_423 | 1/D1/1625:1628, 1/D1/1817:1820 | No text annotation Not in a motif group | ||
| IL_4V7R_424 | 1/D1/1628:1631, 1/D1/1811:1817 | No text annotation Not in a motif group | ||
| IL_4V7R_425 | 1/D1/1645:1649, 1/D1/1806:1810 | Triple sheared Not in a motif group | homologous IL_5TBW_067 IL_56467.8 | |
| IL_4V7R_426 | 1/D1/1661:1663, 1/D1/1786:1788 | No text annotation Not in a motif group | homologous IL_8C3A_074 IL_86319.2 | |
| IL_4V7R_427 | 1/D1/1669:1670, 1/D1/1778:1780 | No text annotation Not in a motif group | ||
| IL_4V7R_428 | 1/D1/1670:1671, 1/D1/1776:1778 | No text annotation Not in a motif group | homologous IL_8C3A_076 IL_76488.4 | |
| IL_4V7R_429 | 1/D1/1694:1698, 1/D1/1747:1752 | No text annotation Not in a motif group | homologous IL_8C3A_077 IL_69313.1 | |
| IL_4V7R_430 | 1/D1/1702:1707, 1/D1/1737:1743 | No text annotation Not in a motif group | homologous IL_8C3A_078 IL_39753.1 | |
| IL_4V7R_431 | 1/D1/1711:1717, 1/D1/1727:1733 | Kink-turn Not in a motif group | homologous IL_5TBW_073 IL_60192.2 | |
| IL_4V7R_432 | 1/D1/1883:1889, 1/D1/2346:2349 | No text annotation Not in a motif group | homologous IL_5TBW_074 IL_49460.2 | |
| IL_4V7R_433 | 1/D1/1895:1897, 1/D1/2338:2340 | Isolated tWW turn Not in a motif group | homologous IL_5TBW_075 IL_54997.7 | |
| IL_4V7R_434 | 1/D1/1898:1901, 1/D1/2336:2337 | Major groove platform; stack outside cWW Not in a motif group | homologous IL_5TBW_076 IL_50694.2 | |
| IL_4V7R_435 | 1/D1/1901:1906, 1/D1/2333:2336 | No text annotation Not in a motif group | homologous IL_8C3A_083 IL_76273.1 | |
| IL_4V7R_436 | 1/D1/1918:1923, 1/D1/1928:1934 | tSH-tSH-tHH-tHS Not in a motif group | homologous IL_5TBW_078 IL_65969.2 | |
| IL_4V7R_437 | 1/D1/1940:1942, 1/D1/2106:2108 | No text annotation Not in a motif group | homologous IL_5TBW_079 IL_86319.2 | |
| IL_4V7R_438 | 1/D1/1947:1948, 1/D1/2098:2101 | No text annotation Not in a motif group | homologous IL_8C3A_086 IL_74125.1 | |
| IL_4V7R_440 | 1/D1/2128:2129, 1/D1/2323:2325 | No text annotation Not in a motif group | homologous IL_8C3A_087 IL_37497.6 | |
| IL_4V7R_441 | 1/D1/2156:2161, 1/D1/2173:2180 | Kink-turn related Not in a motif group | homologous IL_5TBW_083 IL_64509.1 | |
| IL_4V7R_442 | 1/D1/2196:2199, 1/D1/2245:2246 | Major groove outside cWW, minor groove, intercalation pocket Not in a motif group | homologous IL_5TBW_084 IL_88739.3 | |
| IL_4V7R_443 | 1/D1/2200:2201, 1/D1/2241:2244 | No text annotation Not in a motif group | homologous IL_8C3A_090 IL_16396.2 | |
| IL_4V7R_444 | 1/D1/2204:2206, 1/D1/2237:2238 | No text annotation Not in a motif group | ||
| IL_4V7R_445 | 1/D1/2206:2210, 1/D1/2235:2237 | No text annotation Not in a motif group | ||
| IL_4V7R_446 | 1/D1/2211:2217, 1/D1/2228:2234 | No text annotation Not in a motif group | homologous IL_5TBW_088 IL_36973.6 | |
| IL_4V7R_447 | 1/D1/2250:2251, 1/D1/2265:2267 | Single stack bend Not in a motif group | geometric IL_4C7O_002 IL_76488.4 | |
| IL_4V7R_448 | 1/D1/2276:2277, 1/D1/2307:2310 | No text annotation Not in a motif group | homologous IL_8C3A_094 IL_59677.2 | |
| IL_4V7R_449 | 1/D1/2277:2288, 1/D1/2304:2307 | No text annotation Not in a motif group | geometric IL_5TBW_090 IL_81589.2 | |
| IL_4V7R_450 | 1/D1/2391:2394, 1/D1/2986:2988 | No text annotation Not in a motif group | homologous IL_8C3A_096 IL_63450.2 | |
| IL_4V7R_451 | 1/D1/2396:2398, 1/D1/2981:2984 | Minor groove platform with intercalation Not in a motif group | homologous IL_5TBW_092 IL_54678.5 | |
| IL_4V7R_452 | 1/D1/2409:2411, 1/D1/2811:2812 | No text annotation Not in a motif group | homologous IL_8C3A_098 IL_83039.16 | |
| IL_4V7R_453 | 1/D1/2412:2413, 1/D1/2807:2810 | No text annotation Not in a motif group | homologous IL_8C3A_099 IL_42622.4 | |
| IL_4V7R_454 | 1/D1/2422:2425, 1/D1/2604:2608 | No text annotation Not in a motif group | ||
| IL_4V7R_455 | 1/D1/2436:2438, 1/D1/2509:2511 | Isolated cWH basepair Not in a motif group | geometric IL_3R1D_002 IL_70707.2 | |
| IL_4V7R_456 | 1/D1/2440:2442, 1/D1/2505:2507 | No text annotation Not in a motif group | geometric IL_1YZ9_001 IL_86319.2 | |
| IL_4V7R_457 | 1/D1/2444:2447, 1/D1/2499:2503 | No text annotation Not in a motif group | ||
| IL_4V7R_458 | 1/D1/2450:2462, 1/D1/2493:2496 | No text annotation Not in a motif group | ||
| IL_4V7R_459 | 1/D1/2466:2469, 1/D1/2476:2489 | No text annotation Not in a motif group | ||
| IL_4V7R_460 | 1/D1/2520:2526, 1/D1/2584:2587 | No text annotation Not in a motif group | ||
| IL_4V7R_461 | 1/D1/2614:2615, 1/D1/2625:2627 | No text annotation Not in a motif group | homologous IL_8C3A_107 IL_69996.1 | |
| IL_4V7R_462 | 1/D1/2666:2668, 1/D1/2686:2690 | No text annotation Not in a motif group | ||
| IL_4V7R_463 | 1/D1/2718:2721, 1/D1/2735:2738 | No text annotation Not in a motif group | homologous IL_8C3A_109 IL_30621.4 | |
| IL_4V7R_464 | 1/D1/2770:2773, 1/D1/2787:2788 | Single stack bend with bulge Not in a motif group | homologous IL_5TBW_101 IL_76488.4 | |
| IL_4V7R_465 | 1/D1/2823:2824, 1/D1/2865:2867 | Major groove platform Not in a motif group | homologous IL_5TBW_102 IL_27635.3 | |
| IL_4V7R_466 | 1/D1/2824:2826, 1/D1/2863:2865 | No text annotation Not in a motif group | geometric IL_5TBW_021 IL_86319.2 | |
| IL_4V7R_467 | 1/D1/2826:2830, 1/D1/2858:2863 | No text annotation Not in a motif group | ||
| IL_4V7R_468 | 1/D1/2832:2835, 1/D1/2853:2856 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_402D_001 IL_30621.4 | |
| IL_4V7R_469 | 1/D1/2835:2839, 1/D1/2849:2853 | Triple sheared Not in a motif group | geometric IL_5TBW_106 IL_56467.8 | |
| IL_4V7R_470 | 1/D1/2876:2877, 1/D1/2949:2951 | No text annotation Not in a motif group | homologous IL_8C3A_115 IL_76223.2 | |
| IL_4V7R_471 | 1/D1/2879:2881, 1/D1/2943:2947 | Isolated non-canonical cWW with bulges Not in a motif group | geometric IL_5TBW_108 IL_90933.2 | |
| IL_4V7R_472 | 1/D1/2881:2882, 1/D1/2940:2943 | Multiple bulged bases Not in a motif group | homologous IL_5TBW_109 IL_71530.2 | |
| IL_4V7R_473 | 1/D1/2889:2891, 1/D1/2912:2914 | Stack and bulge Not in a motif group | geometric IL_2O3X_001 IL_64417.2 | |
| IL_4V7R_474 | 1/D1/2891:2892, 1/D1/2909:2912 | No text annotation Not in a motif group | homologous IL_8C3A_119 IL_95601.3 | |
| IL_4V7R_475 | 1/D1/2918:2920, 1/D1/2926:2928 | No text annotation Not in a motif group | geometric IL_5TBW_112 IL_86319.2 | |
| IL_4V7R_476 | 1/D1/2960:2961, 1/D1/2970:2972 | Single bulged A Not in a motif group | geometric IL_2VPL_002 IL_37497.6 | |
| IL_4V7R_477 | 1/D1/3003:3007, 1/D1/3139:3145 | No text annotation Not in a motif group | ||
| IL_4V7R_478 | 1/D1/3019:3025, 1/D1/3030:3035 | Sarcin-Ricin target in LSU H95; G-bulge Not in a motif group | geometric IL_4V9F_092 IL_76042.2 | |
| IL_4V7R_479 | 1/D1/3047:3051, 1/D1/3091:3094 | Major groove minor groove platform with tHH Not in a motif group | homologous IL_5TBW_117 IL_37712.2 | |
| IL_4V7R_480 | 1/D1/3054:3059, 1/D1/3084:3088 | No text annotation Not in a motif group | homologous IL_8C3A_127 IL_17136.1 | |
| IL_4V7R_481 | 1/D1/3063:3064, 1/D1/3077:3080 | Multiple bulged bases Not in a motif group | homologous IL_5TBW_119 IL_71530.2 | |
| IL_4V7R_482 | 1/D1/3103:3107, 1/D1/3127:3131 | UAA/GAN Not in a motif group | homologous IL_5TBW_120 IL_89002.2 | |
| IL_4V7R_483 | 1/D1/3159:3161, 1/D1/3289:3291 | No text annotation Not in a motif group | geometric IL_3GM7_006 IL_86319.2 | |
| IL_4V7R_484 | 1/D1/3164:3166, 1/D1/3284:3286 | No text annotation Not in a motif group | homologous IL_8C3A_130 IL_86319.2 | |
| IL_4V7R_485 | 1/D1/3168:3170, 1/D1/3280:3282 | No text annotation Not in a motif group | homologous IL_5TBW_122 IL_86319.2 | |
| IL_4V7R_486 | 1/D1/3177:3179, 1/D1/3209:3211 | Single stack bend Not in a motif group | geometric IL_5J7L_032 IL_76488.4 | |
| IL_4V7R_487 | 1/D1/3221:3223, 1/D1/3262:3264 | UU cWW Not in a motif group | geometric IL_1ZZ5_002 IL_70707.2 | |
| IL_4V7R_489 | 1/D1/3227:3230, 1/D1/3257:3258 | No text annotation Not in a motif group | ||
| IL_4V7R_490 | 1/D1/3231:3233, 1/D1/3254:3256 | No text annotation Not in a motif group | geometric IL_2O3V_001 IL_86319.2 | |
| IL_4V7R_491 | 1/D1/3233:3235, 1/D1/3252:3254 | No text annotation Not in a motif group | homologous IL_5TBW_127 IL_86319.2 | |
| IL_4V7R_492 | 1/D1/3235:3238, 1/D1/3249:3252 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_7A0S_040 IL_30621.4 | |
| IL_4V7R_493 | 1/D1/3296:3297, 1/D1/3391:3393 | Single stack bend Not in a motif group | geometric IL_4V9F_005 IL_76488.4 | |
| IL_4V7R_494 | 1/D1/3300:3303, 1/D1/3311:3314 | No text annotation Not in a motif group | homologous IL_8C3A_135 IL_30621.4 | |
| IL_4V7R_496 | 1/D1/3324:3325, 1/D1/3380:3383 | Single stack bend Not in a motif group | geometric IL_7A0S_054 IL_76488.4 | |
| IL_4V7R_497 | 1/D1/3327:3330, 1/D1/3373:3378 | No text annotation Not in a motif group | ||
| IL_4V7R_498 | 1/D1/3331:3336, 1/D1/3368:3372 | No text annotation Not in a motif group | homologous IL_5TBW_133 IL_83162.5 | |
| IL_4V7R_499 | 1/D1/3340:3345, 1/D1/3360:3364 | No text annotation Not in a motif group | ||
| IL_4V7R_500 | 1/D2/15:16, 1/D2/63:65 | No text annotation Not in a motif group | ||
| IL_4V7R_501 | 1/D2/21:27, 1/D2/53:58 | No text annotation Not in a motif group | homologous IL_5TBW_373 IL_10207.2 | |
| IL_4V7R_502 | 1/D2/72:80, 1/D2/100:106 | No text annotation Not in a motif group | ||
| IL_4V7R_503 | 1/D2/84:87, 1/D2/94:96 | No text annotation Not in a motif group | homologous IL_5TBW_378 IL_86319.2 | |
| IL_4V7R_504 | 1/D3/64:67, 1/D3/92:96 | No text annotation Not in a motif group | geometric IL_6AZ4_001 IL_69145.1 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_4V7R_036 | No text annotation | ||
| IL_4V7R_072 | No text annotation | ||
| IL_4V7R_105 | No text annotation | ||
| IL_4V7R_106 | UG cWW | ||
| IL_4V7R_111 | No text annotation | ||
| IL_4V7R_114 | No text annotation | ||
| IL_4V7R_124 | No text annotation | ||
| IL_4V7R_189 | Stack and bulge | ||
| IL_4V7R_239 | Single stack bend | ||
| IL_4V7R_245 | No text annotation | ||
| IL_4V7R_289 | No text annotation | ||
| IL_4V7R_291 | No text annotation | ||
| IL_4V7R_327 | No text annotation | ||
| IL_4V7R_359 | No text annotation | ||
| IL_4V7R_364 | No text annotation | ||
| IL_4V7R_367 | No text annotation | ||
| IL_4V7R_376 | No text annotation | ||
| IL_4V7R_439 | Stack and bulge | ||
| IL_4V7R_488 | No text annotation | ||
| IL_4V7R_495 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J3_4V7R_001 | 1/A1/760:764, 1/A1/772:775, 1/A1/785:790 | No text annotation Not in a motif group | ||
| J3_4V7R_002 | 1/A1/881:884, 1/A1/928:936, 1/A1/943:947 | No text annotation Not in a motif group | homologous J3_4V88_033 NA | |
| J3_4V7R_003 | 1/A1/1037:1039, 1/A1/1080:1083, 1/A1/1090:1094 | No text annotation Not in a motif group | ||
| J3_4V7R_004 | 1/A1/1161:1164, 1/A1/1581:1587, 1/A1/1609:1616 | No text annotation Not in a motif group | ||
| J3_4V7R_005 | 1/A1/1168:1171, 1/A1/1468:1470, 1/A1/1574:1577 | No text annotation Not in a motif group | homologous J3_4V88_036 NA | |
| J3_4V7R_006 | 1/A1/1180:1188, 1/A1/1197:1209, 1/A1/1454:1458 | No text annotation Not in a motif group | ||
| J3_4V7R_007 | 1/A1/1215:1220, 1/A1/1263:1267, 1/A1/1442:1448 | No text annotation Not in a motif group | homologous J3_4V88_038 NA | |
| J3_4V7R_008 | 1/A1/1283:1288, 1/A1/1327:1332, 1/A1/1419:1424 | No text annotation Not in a motif group | homologous J3_4V88_039 NA | |
| J3_4V7R_009 | 1/A1/1336:1338, 1/A1/1386:1389, 1/A1/1412:1415 | No text annotation Not in a motif group | homologous J3_4V88_040 NA | |
| J3_4V7R_010 | 1/A1/1470:1474, 1/A1/1533:1540, 1/A1/1571:1574 | No text annotation Not in a motif group | homologous J3_4V88_041 NA | |
| J3_4V7R_011 | 1/B1/113:117, 1/B1/151:160, 1/B1/261:267 | No text annotation Not in a motif group | ||
| J3_4V7R_012 | 1/B1/501:505, 1/B1/586:597, 1/B1/606:612 | No text annotation Not in a motif group | ||
| J3_4V7R_013 | 1/B1/814:820, 1/B1/905:907, 1/B1/923:926 | No text annotation Not in a motif group | homologous J3_8C3A_003 NA | |
| J3_4V7R_014 | 1/B1/828:831, 1/B1/863:867, 1/B1/892:897 | No text annotation Not in a motif group | homologous J3_5TBW_005 NA | |
| J3_4V7R_015 | 1/B1/1230:1232, 1/B1/1256:1262, 1/B1/1277:1279 | No text annotation Not in a motif group | ||
| J3_4V7R_016 | 1/B1/1479:1485, 1/B1/1857:1859, 1/B1/1871:1874 | No text annotation Not in a motif group | homologous J3_5TBW_008 NA | |
| J3_4V7R_017 | 1/B1/1488:1491, 1/B1/1837:1843, 1/B1/1852:1854 | No text annotation Not in a motif group | homologous J3_8C3A_007 NA | |
| J3_4V7R_018 | 1/B1/2432:2435, 1/B1/2512:2517, 1/B1/2590:2597 | No text annotation Not in a motif group | homologous J3_5TBW_012 NA | |
| J3_4V7R_019 | 1/B1/2529:2532, 1/B1/2547:2563, 1/B1/2578:2581 | No text annotation Not in a motif group | ||
| J3_4V7R_020 | 1/B1/2664:2666, 1/B1/2690:2692, 1/B1/2701:2706 | No text annotation Not in a motif group | homologous J3_8C3A_010 NA | |
| J3_4V7R_021 | 1/B1/2886:2889, 1/B1/2914:2916, 1/B1/2930:2936 | No text annotation Not in a motif group | homologous J3_5TBW_014 NA | |
| J3_4V7R_022 | 1/B1/3298:3300, 1/B1/3314:3320, 1/B1/3387:3390 | No text annotation Not in a motif group | ||
| J3_4V7R_023 | 1/B2/9:14, 1/B2/66:68, 1/B2/110:112 | No text annotation Not in a motif group | ||
| J3_4V7R_024 | 1/C1/760:764, 1/C1/772:775, 1/C1/785:790 | No text annotation Not in a motif group | ||
| J3_4V7R_025 | 1/C1/881:884, 1/C1/928:936, 1/C1/943:947 | No text annotation Not in a motif group | homologous J3_4V88_033 NA | |
| J3_4V7R_026 | 1/C1/1037:1039, 1/C1/1080:1083, 1/C1/1090:1094 | No text annotation Not in a motif group | ||
| J3_4V7R_027 | 1/C1/1161:1164, 1/C1/1581:1587, 1/C1/1609:1616 | No text annotation Not in a motif group | ||
| J3_4V7R_028 | 1/C1/1168:1171, 1/C1/1468:1470, 1/C1/1574:1577 | No text annotation Not in a motif group | homologous J3_8C3A_039 NA | |
| J3_4V7R_029 | 1/C1/1180:1188, 1/C1/1197:1209, 1/C1/1454:1458 | No text annotation Not in a motif group | ||
| J3_4V7R_030 | 1/C1/1215:1220, 1/C1/1263:1267, 1/C1/1442:1448 | No text annotation Not in a motif group | ||
| J3_4V7R_031 | 1/C1/1283:1288, 1/C1/1327:1332, 1/C1/1419:1424 | No text annotation Not in a motif group | homologous J3_4V88_039 NA | |
| J3_4V7R_032 | 1/C1/1336:1338, 1/C1/1386:1389, 1/C1/1412:1415 | No text annotation Not in a motif group | homologous J3_4V88_040 NA | |
| J3_4V7R_033 | 1/C1/1470:1474, 1/C1/1533:1540, 1/C1/1571:1574 | No text annotation Not in a motif group | homologous J3_4V88_041 NA | |
| J3_4V7R_034 | 1/D1/113:117, 1/D1/151:160, 1/D1/261:267 | No text annotation Not in a motif group | ||
| J3_4V7R_035 | 1/D1/501:506, 1/D1/584:597, 1/D1/606:612 | No text annotation Not in a motif group | ||
| J3_4V7R_036 | 1/D1/814:820, 1/D1/905:907, 1/D1/923:926 | No text annotation Not in a motif group | homologous J3_8C3A_003 NA | |
| J3_4V7R_037 | 1/D1/828:831, 1/D1/863:867, 1/D1/892:897 | No text annotation Not in a motif group | homologous J3_5TBW_005 NA | |
| J3_4V7R_038 | 1/D1/1230:1232, 1/D1/1256:1262, 1/D1/1277:1279 | No text annotation Not in a motif group | homologous J3_5TBW_007 NA | |
| J3_4V7R_039 | 1/D1/1479:1485, 1/D1/1857:1859, 1/D1/1871:1874 | No text annotation Not in a motif group | homologous J3_5TBW_008 NA | |
| J3_4V7R_040 | 1/D1/1488:1491, 1/D1/1837:1843, 1/D1/1852:1854 | No text annotation Not in a motif group | homologous J3_8C3A_007 NA | |
| J3_4V7R_041 | 1/D1/2432:2435, 1/D1/2512:2517, 1/D1/2590:2597 | No text annotation Not in a motif group | homologous J3_5TBW_012 NA | |
| J3_4V7R_042 | 1/D1/2529:2532, 1/D1/2547:2563, 1/D1/2578:2581 | No text annotation Not in a motif group | ||
| J3_4V7R_043 | 1/D1/2664:2666, 1/D1/2690:2692, 1/D1/2701:2706 | No text annotation Not in a motif group | homologous J3_8C3A_010 NA | |
| J3_4V7R_044 | 1/D1/2886:2889, 1/D1/2914:2916, 1/D1/2930:2936 | No text annotation Not in a motif group | homologous J3_5TBW_014 NA | |
| J3_4V7R_045 | 1/D1/3298:3300, 1/D1/3314:3320, 1/D1/3387:3390 | No text annotation Not in a motif group | ||
| J3_4V7R_046 | 1/D2/9:14, 1/D2/66:68, 1/D2/110:112 | No text annotation Not in a motif group |
Problematic loops
No problematic loops
Coloring options: