7OSM | Motifs

120 Hairpin loops
223 Internal loops
30 Junction loops

Valid loops

#	loop id	location	annotation	motif
1	HL_7OSM_001 ➜	1/18S/7:17	NA	NA
2	HL_7OSM_003 ➜	1/18S/154:160	NA	NA
3	HL_7OSM_005 ➜	1/18S/243:250	NA	NA
4	HL_7OSM_006 ➜	1/18S/275:281	NA	NA
5	HL_7OSM_007 ➜	1/18S/330:338	NA	NA
6	HL_7OSM_008 ➜	1/18S/368:373	NA	NA
7	HL_7OSM_009 ➜	1/18S/393:404	NA	NA
8	HL_7OSM_010 ➜	1/18S/414:419	NA	NA
9	HL_7OSM_011 ➜	1/18S/450:456	NA	NA
10	HL_7OSM_012 ➜	1/18S/486:501	NA	NA
11	HL_7OSM_013 ➜	1/18S/520:532	NA	NA
12	HL_7OSM_014 ➜	1/18S/569:574	NA	NA
13	HL_7OSM_016 ➜	1/18S/700:738	NA	NA
14	HL_7OSM_017 ➜	1/18S/764:772	NA	NA
15	HL_7OSM_018 ➜	1/18S/777:783	NA	NA
16	HL_7OSM_020 ➜	1/18S/899:910	NA	NA
17	HL_7OSM_021 ➜	1/18S/937:942	NA	NA
18	HL_7OSM_022 ➜	1/18S/997:1007	NA	NA
19	HL_7OSM_023 ➜	1/18S/1054:1065	NA	NA
20	HL_7OSM_024 ➜	1/18S/1084:1089	NA	NA
21	HL_7OSM_025 ➜	1/18S/1121:1126	NA	NA
22	HL_7OSM_026 ➜	1/18S/1187:1198	NA	NA
23	HL_7OSM_027 ➜	1/18S/1238:1247	NA	NA
24	HL_7OSM_028 ➜	1/18S/1296:1301	NA	NA
25	HL_7OSM_029 ➜	1/18S/1309:1316	NA	NA
26	HL_7OSM_030 ➜	1/18S/1359:1364	NA	NA
27	HL_7OSM_031 ➜	1/18S/1396:1402	NA	NA
28	HL_7OSM_032 ➜	1/18S/1501:1506	NA	NA
29	HL_7OSM_033 ➜	1/18S/1550:1561	NA	NA
30	HL_7OSM_034 ➜	1/18S/1594:1602	NA	NA
31	HL_7OSM_035 ➜	1/18S/1687:1714	NA	NA
32	HL_7OSM_036 ➜	1/18S/1778:1783	NA	NA
33	HL_7OSM_037 ➜	1/25S/38:45	NA	NA
34	HL_7OSM_038 ➜	1/25S/69:74	NA	NA
35	HL_7OSM_039 ➜	1/25S/90:96	NA	NA
36	HL_7OSM_040 ➜	1/25S/132:136	NA	NA
37	HL_7OSM_041 ➜	1/25S/194:201	NA	NA
38	HL_7OSM_042 ➜	1/25S/208:212	NA	NA
39	HL_7OSM_043 ➜	1/25S/216:224	NA	NA
40	HL_7OSM_044 ➜	1/25S/278:287	NA	NA
41	HL_7OSM_045 ➜	1/25S/303:312	NA	NA
42	HL_7OSM_046 ➜	1/25S/357:362	NA	NA
43	HL_7OSM_047 ➜	1/25S/382:387	NA	NA
44	HL_7OSM_048 ➜	1/25S/543:548	NA	NA
45	HL_7OSM_049 ➜	1/25S/598:605	NA	NA
46	HL_7OSM_050 ➜	1/25S/640:649	NA	NA
47	HL_7OSM_051 ➜	1/25S/686:694	NA	NA
48	HL_7OSM_052 ➜	1/25S/707:712	NA	NA
49	HL_7OSM_053 ➜	1/25S/732:737	NA	NA
50	HL_7OSM_054 ➜	1/25S/763:768	NA	NA
51	HL_7OSM_055 ➜	1/25S/844:849	NA	NA
52	HL_7OSM_056 ➜	1/25S/876:885	NA	NA
53	HL_7OSM_057 ➜	1/25S/910:918	NA	NA
54	HL_7OSM_058 ➜	1/25S/958:963	NA	NA
55	HL_7OSM_060 ➜	1/25S/1076:1083	NA	NA
56	HL_7OSM_061 ➜	1/25S/1126:1132	NA	NA
57	HL_7OSM_062 ➜	1/25S/1148:1155	NA	NA
58	HL_7OSM_063 ➜	1/25S/1239:1249	NA	NA
59	HL_7OSM_064 ➜	1/25S/1267:1274	NA	NA
60	HL_7OSM_065 ➜	1/25S/1347:1357	NA	NA
61	HL_7OSM_066 ➜	1/25S/1403:1408	NA	NA
62	HL_7OSM_067 ➜	1/25S/1462:1470	NA	NA
63	HL_7OSM_068 ➜	1/25S/1506:1512	NA	NA
64	HL_7OSM_069 ➜	1/25S/1544:1549	NA	NA
65	HL_7OSM_071 ➜	1/25S/1599:1608	NA	NA
66	HL_7OSM_072 ➜	1/25S/1634:1639	NA	NA
67	HL_7OSM_073 ➜	1/25S/1680:1688	NA	NA
68	HL_7OSM_074 ➜	1/25S/1719:1725	NA	NA
69	HL_7OSM_075 ➜	1/25S/1760:1765	NA	NA
70	HL_7OSM_076 ➜	1/25S/1792:1796	NA	NA
71	HL_7OSM_077 ➜	1/25S/1844:1851	NA	NA
72	HL_7OSM_078 ➜	1/25S/1862:1868	NA	NA
73	HL_7OSM_079 ➜	1/25S/1923:1928	NA	NA
74	HL_7OSM_081 ➜	1/25S/2110:2114	NA	NA
75	HL_7OSM_082 ➜	1/25S/2135:2145	NA	NA
76	HL_7OSM_083 ➜	1/25S/2164:2170	NA	NA
77	HL_7OSM_084 ➜	1/25S/2220:2225	NA	NA
78	HL_7OSM_085 ➜	1/25S/2253:2263	NA	NA
79	HL_7OSM_086 ➜	1/25S/2292:2300	NA	NA
80	HL_7OSM_087 ➜	1/25S/2369:2378	NA	NA
81	HL_7OSM_089 ➜	1/25S/2534:2545	NA	NA
82	HL_7OSM_090 ➜	1/25S/2568:2573	NA	NA
83	HL_7OSM_091 ➜	1/25S/2616:2624	NA	NA
84	HL_7OSM_092 ➜	1/25S/2633:2645	NA	NA
85	HL_7OSM_093 ➜	1/25S/2673:2681	NA	NA
86	HL_7OSM_094 ➜	1/25S/2693:2700	NA	NA
87	HL_7OSM_095 ➜	1/25S/2724:2732	NA	NA
88	HL_7OSM_096 ➜	1/25S/2744:2749	NA	NA
89	HL_7OSM_097 ➜	1/25S/2776:2784	NA	NA
90	HL_7OSM_098 ➜	1/25S/2840:2848	NA	NA
91	HL_7OSM_099 ➜	1/25S/2897:2904	NA	NA
92	HL_7OSM_100 ➜	1/25S/2920:2926	NA	NA
93	HL_7OSM_101 ➜	1/25S/2963:2968	NA	NA
94	HL_7OSM_102 ➜	1/25S/3025:3030	NA	NA
95	HL_7OSM_103 ➜	1/25S/3068:3073	NA	NA
96	HL_7OSM_104 ➜	1/25S/3110:3124	NA	NA
97	HL_7OSM_105 ➜	1/25S/3194:3197	NA	NA
98	HL_7OSM_106 ➜	1/25S/3240:3247	NA	NA
99	HL_7OSM_107 ➜	1/25S/3303:3311	NA	NA
100	HL_7OSM_108 ➜	1/25S/3350:3353	NA	NA
101	HL_7OSM_109 ➜	1/58S/47:56	NA	NA
102	HL_7OSM_110 ➜	1/58S/73:78	NA	NA
103	HL_7OSM_111 ➜	1/58S/108:114	NA	NA
104	HL_7OSM_112 ➜	1/58S/124:129	NA	NA
105	HL_7OSM_113 ➜	1/AB/36:41	NA	NA
106	HL_7OSM_114 ➜	1/AB/88:93	NA	NA
107	HL_7OSM_115 ➜	1/ASIT/13:22	NA	HL_66902.1
108	HL_7OSM_116 ➜	1/ASIT/31:39	NA	NA
109	HL_7OSM_117 ➜	1/ASIT/53:62	NA	HL_04182.1
110	HL_7OSM_118 ➜	1/PSIT/13:23	NA	NA
111	HL_7OSM_119 ➜	1/PSIT/32:40	NA	NA
112	HL_7OSM_120 ➜	1/PSIT/53:63	NA	NA

Problematic loops

#	loop id	Problem	Sequence
1	HL_7OSM_002 ➜	missing nts	NA
2	HL_7OSM_004 ➜	missing nts	NA
3	HL_7OSM_015 ➜	missing nts	NA
4	HL_7OSM_019 ➜	missing nts	NA
5	HL_7OSM_059 ➜	missing nts	NA
6	HL_7OSM_070 ➜	missing nts	NA
7	HL_7OSM_080 ➜	missing nts	NA
8	HL_7OSM_088 ➜	missing nts	NA

Valid loops

#	loop id	location	annotation	motif
1	IL_7OSM_001 ➜	1/18S/24:26,1/18S/600:601	NA	NA
2	IL_7OSM_002 ➜	1/18S/35:37,1/18S/471:473	NA	NA
3	IL_7OSM_003 ➜	1/18S/37:41,1/18S/466:471	NA	NA
4	IL_7OSM_004 ➜	1/18S/42:48,1/18S/431:433	NA	NA
5	IL_7OSM_005 ➜	1/18S/50:52,1/18S/428:429	NA	NA
6	IL_7OSM_006 ➜	1/18S/58:63,1/18S/87:89	NA	NA
7	IL_7OSM_007 ➜	1/18S/64:69,1/18S/82:86	NA	NA
8	IL_7OSM_008 ➜	1/18S/109:112,1/18S/302:305	NA	NA
9	IL_7OSM_009 ➜	1/18S/113:116,1/18S/300:301	NA	NA
10	IL_7OSM_010 ➜	1/18S/117:122,1/18S/295:299	NA	NA
11	IL_7OSM_011 ➜	1/18S/142:149,1/18S/165:172	NA	NA
12	IL_7OSM_012 ➜	1/18S/150:152,1/18S/162:164	NA	NA
13	IL_7OSM_013 ➜	1/18S/204:208,1/18S/257:263	NA	NA
14	IL_7OSM_015 ➜	1/18S/265:267,1/18S/288:289	NA	NA
15	IL_7OSM_016 ➜	1/18S/270:273,1/18S/283:285	NA	NA
16	IL_7OSM_017 ➜	1/18S/311:316,1/18S/348:355	NA	NA
17	IL_7OSM_018 ➜	1/18S/318:323,1/18S/345:346	NA	NA
18	IL_7OSM_019 ➜	1/18S/363:365,1/18S/376:381	NA	NA
19	IL_7OSM_020 ➜	1/18S/389:391,1/18S/406:408	NA	NA
20	IL_7OSM_021 ➜	1/18S/411:413,1/18S/420:422	NA	NA
21	IL_7OSM_022 ➜	1/18S/439:441,1/18S/463:464	NA	NA
22	IL_7OSM_023 ➜	1/18S/443:447,1/18S/460:461	NA	NA
23	IL_7OSM_024 ➜	1/18S/447:448,1/18S/458:460	NA	NA
24	IL_7OSM_025 ➜	1/18S/481:484,1/18S/503:507	NA	NA
25	IL_7OSM_026 ➜	1/18S/516:518,1/18S/533:536	NA	NA
26	IL_7OSM_027 ➜	1/18S/518:520,1/18S/532:533	NA	NA
27	IL_7OSM_028 ➜	1/18S/550:557,1/18S/587:588	NA	NA
28	IL_7OSM_029 ➜	1/18S/557:559,1/18S/586:587	NA	NA
29	IL_7OSM_030 ➜	1/18S/562:568,1/18S/575:583	NA	NA
30	IL_7OSM_031 ➜	1/18S/616:622,1/18S/1104:1105	NA	NA
31	IL_7OSM_032 ➜	1/18S/624:626,1/18S/973:975	NA	NA
32	IL_7OSM_033 ➜	1/18S/627:631,1/18S/968:972	NA	NA
33	IL_7OSM_034 ➜	1/18S/646:648,1/18S/686:688	NA	NA
34	IL_7OSM_035 ➜	1/18S/746:747,1/18S/802:805	NA	NA
35	IL_7OSM_036 ➜	1/18S/748:750,1/18S/799:801	NA	NA
36	IL_7OSM_037 ➜	1/18S/751:753,1/18S/794:798	NA	NA
37	IL_7OSM_038 ➜	1/18S/753:759,1/18S/791:794	NA	NA
38	IL_7OSM_039 ➜	1/18S/817:823,1/18S/849:854	NA	NA
39	IL_7OSM_040 ➜	1/18S/865:866,1/18S/962:965	NA	NA
40	IL_7OSM_041 ➜	1/18S/867:870,1/18S/957:961	NA	NA
41	IL_7OSM_042 ➜	1/18S/871:874,1/18S/953:956	NA	NA
42	IL_7OSM_043 ➜	1/18S/874:878,1/18S/950:953	NA	NA
43	IL_7OSM_044 ➜	1/18S/885:888,1/18S/924:927	NA	NA
44	IL_7OSM_045 ➜	1/18S/893:899,1/18S/910:919	NA	NA
45	IL_7OSM_046 ➜	1/18S/985:990,1/18S/1014:1016	NA	NA
46	IL_7OSM_047 ➜	1/18S/990:994,1/18S/1010:1014	NA	NA
47	IL_7OSM_048 ➜	1/18S/995:997,1/18S/1007:1009	NA	NA
48	IL_7OSM_049 ➜	1/18S/1034:1036,1/18S/1095:1101	NA	NA
49	IL_7OSM_050 ➜	1/18S/1041:1044,1/18S/1074:1077	NA	NA
50	IL_7OSM_051 ➜	1/18S/1051:1053,1/18S/1066:1067	NA	NA
51	IL_7OSM_052 ➜	1/18S/1111:1118,1/18S/1129:1134	NA	NA
52	IL_7OSM_053 ➜	1/18S/1146:1147,1/18S/1630:1632	NA	NA
53	IL_7OSM_054 ➜	1/18S/1149:1151,1/18S/1627:1628	NA	NA
54	IL_7OSM_055 ➜	1/18S/1157:1160,1/18S/1617:1621	NA	NA
55	IL_7OSM_056 ➜	1/18S/1173:1175,1/18S/1464:1466	NA	NA
56	IL_7OSM_057 ➜	1/18S/1177:1179,1/18S/1459:1462	NA	NA
57	IL_7OSM_058 ➜	1/18S/1213:1215,1/18S/1448:1450	NA	NA
58	IL_7OSM_059 ➜	1/18S/1234:1237,1/18S/1248:1251	NA	NA
59	IL_7OSM_060 ➜	1/18S/1268:1271,1/18S/1439:1441	NA	NA
60	IL_7OSM_061 ➜	1/18S/1272:1279,1/18S/1429:1438	NA	NA
61	IL_7OSM_062 ➜	1/18S/1279:1281,1/18S/1426:1429	NA	NA
62	IL_7OSM_063 ➜	1/18S/1290:1292,1/18S/1323:1325	NA	NA
63	IL_7OSM_064 ➜	1/18S/1306:1308,1/18S/1317:1318	NA	NA
64	IL_7OSM_065 ➜	1/18S/1339:1342,1/18S/1383:1385	NA	NA
65	IL_7OSM_066 ➜	1/18S/1342:1349,1/18S/1376:1383	NA	NA
66	IL_7OSM_067 ➜	1/18S/1350:1354,1/18S/1369:1375	NA	NA
67	IL_7OSM_068 ➜	1/18S/1389:1391,1/18S/1407:1412	NA	NA
68	IL_7OSM_069 ➜	1/18S/1488:1494,1/18S/1513:1518	NA	NA
69	IL_7OSM_070 ➜	1/18S/1495:1498,1/18S/1509:1512	NA	NA
70	IL_7OSM_071 ➜	1/18S/1540:1546,1/18S/1565:1571	NA	NA
71	IL_7OSM_072 ➜	1/18S/1636:1638,1/18S/1764:1767	NA	NA
72	IL_7OSM_073 ➜	1/18S/1638:1641,1/18S/1760:1764	NA	NA
73	IL_7OSM_074 ➜	1/18S/1642:1644,1/18S/1757:1759	NA	NA
74	IL_7OSM_075 ➜	1/18S/1644:1647,1/18S/1753:1757	NA	NA
75	IL_7OSM_076 ➜	1/18S/1650:1652,1/18S/1748:1750	NA	NA
76	IL_7OSM_077 ➜	1/18S/1653:1656,1/18S/1744:1747	NA	NA
77	IL_7OSM_078 ➜	1/18S/1656:1658,1/18S/1743:1744	NA	NA
78	IL_7OSM_079 ➜	1/18S/1665:1667,1/18S/1734:1736	NA	NA
79	IL_7OSM_080 ➜	1/18S/1669:1672,1/18S/1729:1732	NA	NA
80	IL_7OSM_081 ➜	1/18S/1672:1674,1/18S/1727:1729	NA	NA
81	IL_7OSM_082 ➜	1/18S/1675:1678,1/18S/1723:1726	NA	NA
82	IL_7OSM_083 ➜	1/18S/1678:1682,1/18S/1719:1723	NA	NA
83	IL_7OSM_084 ➜	1/25S/7:8,1/58S/150:152	NA	NA
84	IL_7OSM_085 ➜	1/25S/13:15,1/58S/144:145	NA	NA
85	IL_7OSM_086 ➜	1/25S/27:28,1/25S/56:58	NA	NA
86	IL_7OSM_087 ➜	1/25S/31:38,1/25S/45:53	NA	NA
87	IL_7OSM_088 ➜	1/25S/82:89,1/25S/97:103	NA	NA
88	IL_7OSM_089 ➜	1/25S/123:124,1/25S/144:149	NA	NA
89	IL_7OSM_090 ➜	1/25S/125:127,1/25S/141:143	NA	NA
90	IL_7OSM_091 ➜	1/25S/163:166,1/25S/256:258	NA	NA
91	IL_7OSM_092 ➜	1/25S/169:171,1/25S/247:253	NA	NA
92	IL_7OSM_093 ➜	1/25S/176:178,1/25S/238:242	NA	NA
93	IL_7OSM_094 ➜	1/25S/183:185,1/25S/232:233	NA	NA
94	IL_7OSM_095 ➜	1/25S/337:339,1/58S/25:26	NA	NA
95	IL_7OSM_096 ➜	1/25S/376:379,1/25S/390:403	NA	NA
96	IL_7OSM_097 ➜	1/25S/404:410,1/58S/13:19	NA	NA
97	IL_7OSM_098 ➜	1/25S/429:431,1/25S/628:630	NA	NA
98	IL_7OSM_100 ➜	1/25S/512:513,1/25S/577:579	NA	NA
99	IL_7OSM_101 ➜	1/25S/517:525,1/25S/567:573	NA	NA
100	IL_7OSM_102 ➜	1/25S/529:538,1/25S/553:563	NA	NA
101	IL_7OSM_103 ➜	1/25S/668:670,1/25S/792:794	NA	NA
102	IL_7OSM_104 ➜	1/25S/680:684,1/25S/696:700	NA	NA
103	IL_7OSM_105 ➜	1/25S/725:728,1/25S/741:745	NA	NA
104	IL_7OSM_106 ➜	1/25S/752:753,1/25S/779:781	NA	NA
105	IL_7OSM_107 ➜	1/25S/755:756,1/25S/775:777	NA	NA
106	IL_7OSM_108 ➜	1/25S/758:763,1/25S/768:773	NA	NA
107	IL_7OSM_109 ➜	1/25S/803:805,1/25S/938:940	NA	NA
108	IL_7OSM_110 ➜	1/25S/805:809,1/25S/931:938	NA	NA
109	IL_7OSM_111 ➜	1/25S/828:829,1/25S/895:897	NA	NA
110	IL_7OSM_112 ➜	1/25S/833:834,1/25S/859:861	NA	NA
111	IL_7OSM_113 ➜	1/25S/834:838,1/25S/855:859	NA	NA
112	IL_7OSM_114 ➜	1/25S/869:872,1/25S/888:890	NA	NA
113	IL_7OSM_115 ➜	1/25S/873:875,1/25S/886:887	NA	NA
114	IL_7OSM_116 ➜	1/25S/907:909,1/25S/919:923	NA	NA
115	IL_7OSM_117 ➜	1/25S/969:970,1/25S/1111:1113	NA	NA
116	IL_7OSM_118 ➜	1/25S/977:982,1/25S/1101:1104	NA	NA
117	IL_7OSM_119 ➜	1/25S/983:985,1/25S/1099:1100	NA	NA
118	IL_7OSM_120 ➜	1/25S/991:997,1/25S/1052:1058	NA	NA
119	IL_7OSM_121 ➜	1/25S/997:998,1/25S/1050:1052	NA	NA
120	IL_7OSM_122 ➜	1/25S/999:1004,1/25S/1046:1049	NA	NA
121	IL_7OSM_123 ➜	1/25S/1006:1009,1/25S/1041:1044	NA	NA
122	IL_7OSM_124 ➜	1/25S/1009:1011,1/25S/1039:1041	NA	NA
123	IL_7OSM_125 ➜	1/25S/1013:1020,1/25S/1032:1037	NA	NA
124	IL_7OSM_126 ➜	1/25S/1069:1072,1/25S/1086:1089	NA	NA
125	IL_7OSM_127 ➜	1/25S/1074:1076,1/25S/1083:1084	NA	NA
126	IL_7OSM_128 ➜	1/25S/1120:1122,1/25S/1136:1138	NA	NA
127	IL_7OSM_129 ➜	1/25S/1167:1171,1/25S/1328:1332	NA	NA
128	IL_7OSM_130 ➜	1/25S/1173:1180,1/25S/1325:1326	NA	NA
129	IL_7OSM_131 ➜	1/25S/1180:1182,1/25S/1324:1325	NA	NA
130	IL_7OSM_132 ➜	1/25S/1187:1194,1/25S/1314:1319	NA	NA
131	IL_7OSM_133 ➜	1/25S/1194:1205,1/25S/1299:1314	NA	NA
132	IL_7OSM_134 ➜	1/25S/1207:1209,1/25S/1296:1297	NA	NA
133	IL_7OSM_135 ➜	1/25S/1218:1226,1/25S/1283:1287	NA	NA
134	IL_7OSM_136 ➜	1/25S/1234:1238,1/25S/1250:1254	NA	NA
135	IL_7OSM_137 ➜	1/25S/1262:1266,1/25S/1275:1277	NA	NA
136	IL_7OSM_138 ➜	1/25S/1376:1378,1/25S/1428:1431	NA	NA
137	IL_7OSM_139 ➜	1/25S/1385:1387,1/25S/1420:1421	NA	NA
138	IL_7OSM_140 ➜	1/25S/1388:1395,1/25S/1415:1419	NA	NA
139	IL_7OSM_141 ➜	1/25S/1398:1400,1/25S/1411:1412	NA	NA
140	IL_7OSM_142 ➜	1/25S/1444:1450,1/25S/2354:2359	NA	NA
141	IL_7OSM_143 ➜	1/25S/1500:1505,1/25S/1513:1516	NA	NA
142	IL_7OSM_144 ➜	1/25S/1532:1536,1/25S/1585:1590	NA	NA
143	IL_7OSM_145 ➜	1/25S/1618:1622,1/25S/1823:1826	NA	NA
144	IL_7OSM_146 ➜	1/25S/1623:1624,1/25S/1819:1822	NA	NA
145	IL_7OSM_147 ➜	1/25S/1626:1631,1/25S/1811:1817	NA	NA
146	IL_7OSM_148 ➜	1/25S/1645:1649,1/25S/1806:1810	NA	NA
147	IL_7OSM_149 ➜	1/25S/1661:1663,1/25S/1786:1788	NA	NA
148	IL_7OSM_150 ➜	1/25S/1669:1670,1/25S/1778:1780	NA	NA
149	IL_7OSM_151 ➜	1/25S/1670:1671,1/25S/1776:1778	NA	NA
150	IL_7OSM_152 ➜	1/25S/1694:1698,1/25S/1747:1752	NA	NA
151	IL_7OSM_153 ➜	1/25S/1702:1707,1/25S/1737:1743	NA	NA
152	IL_7OSM_154 ➜	1/25S/1711:1717,1/25S/1727:1733	NA	NA
153	IL_7OSM_155 ➜	1/25S/1883:1889,1/25S/2346:2349	NA	NA
154	IL_7OSM_156 ➜	1/25S/1895:1897,1/25S/2338:2340	NA	NA
155	IL_7OSM_157 ➜	1/25S/1898:1901,1/25S/2336:2337	NA	NA
156	IL_7OSM_158 ➜	1/25S/1901:1906,1/25S/2333:2336	NA	NA
157	IL_7OSM_159 ➜	1/25S/1918:1923,1/25S/1928:1934	NA	NA
158	IL_7OSM_160 ➜	1/25S/1940:1942,1/25S/2106:2108	NA	NA
159	IL_7OSM_161 ➜	1/25S/1947:1948,1/25S/2098:2101	NA	NA
160	IL_7OSM_162 ➜	1/25S/2128:2129,1/25S/2323:2325	NA	NA
161	IL_7OSM_163 ➜	1/25S/2156:2161,1/25S/2173:2180	NA	NA
162	IL_7OSM_164 ➜	1/25S/2196:2199,1/25S/2245:2246	NA	NA
163	IL_7OSM_165 ➜	1/25S/2200:2201,1/25S/2241:2244	NA	NA
164	IL_7OSM_166 ➜	1/25S/2204:2206,1/25S/2237:2238	NA	NA
165	IL_7OSM_167 ➜	1/25S/2206:2210,1/25S/2235:2237	NA	NA
166	IL_7OSM_168 ➜	1/25S/2211:2217,1/25S/2228:2234	NA	NA
167	IL_7OSM_169 ➜	1/25S/2276:2277,1/25S/2307:2310	NA	NA
168	IL_7OSM_170 ➜	1/25S/2277:2288,1/25S/2304:2307	NA	NA
169	IL_7OSM_171 ➜	1/25S/2391:2394,1/25S/2986:2988	NA	NA
170	IL_7OSM_172 ➜	1/25S/2396:2398,1/25S/2981:2984	NA	NA
171	IL_7OSM_173 ➜	1/25S/2409:2411,1/25S/2811:2812	NA	NA
172	IL_7OSM_174 ➜	1/25S/2412:2413,1/25S/2807:2810	NA	NA
173	IL_7OSM_175 ➜	1/25S/2423:2425,1/25S/2604:2607	NA	NA
174	IL_7OSM_176 ➜	1/25S/2520:2526,1/25S/2584:2587	NA	NA
175	IL_7OSM_177 ➜	1/25S/2614:2615,1/25S/2625:2627	NA	NA
176	IL_7OSM_178 ➜	1/25S/2666:2668,1/25S/2686:2690	NA	NA
177	IL_7OSM_179 ➜	1/25S/2718:2721,1/25S/2735:2738	NA	NA
178	IL_7OSM_180 ➜	1/25S/2770:2773,1/25S/2787:2788	NA	NA
179	IL_7OSM_181 ➜	1/25S/2823:2824,1/25S/2865:2867	NA	NA
180	IL_7OSM_182 ➜	1/25S/2824:2826,1/25S/2863:2865	NA	NA
181	IL_7OSM_183 ➜	1/25S/2826:2828,1/25S/2862:2863	NA	NA
182	IL_7OSM_184 ➜	1/25S/2828:2830,1/25S/2858:2862	NA	NA
183	IL_7OSM_185 ➜	1/25S/2835:2839,1/25S/2849:2853	NA	NA
184	IL_7OSM_186 ➜	1/25S/2876:2877,1/25S/2949:2951	NA	NA
185	IL_7OSM_187 ➜	1/25S/2879:2881,1/25S/2943:2947	NA	NA
186	IL_7OSM_188 ➜	1/25S/2881:2882,1/25S/2940:2943	NA	NA
187	IL_7OSM_189 ➜	1/25S/2889:2891,1/25S/2912:2914	NA	NA
188	IL_7OSM_190 ➜	1/25S/2891:2892,1/25S/2909:2912	NA	NA
189	IL_7OSM_191 ➜	1/25S/2918:2920,1/25S/2926:2928	NA	NA
190	IL_7OSM_192 ➜	1/25S/2960:2961,1/25S/2970:2972	NA	NA
191	IL_7OSM_193 ➜	1/25S/3004:3007,1/25S/3139:3144	NA	NA
192	IL_7OSM_194 ➜	1/25S/3012:3014,1/25S/3040:3042	NA	NA
193	IL_7OSM_195 ➜	1/25S/3018:3025,1/25S/3030:3036	NA	NA
194	IL_7OSM_196 ➜	1/25S/3047:3051,1/25S/3091:3094	NA	NA
195	IL_7OSM_197 ➜	1/25S/3054:3059,1/25S/3084:3088	NA	NA
196	IL_7OSM_198 ➜	1/25S/3063:3064,1/25S/3077:3080	NA	NA
197	IL_7OSM_199 ➜	1/25S/3103:3107,1/25S/3127:3131	NA	NA
198	IL_7OSM_200 ➜	1/25S/3164:3166,1/25S/3284:3286	NA	NA
199	IL_7OSM_201 ➜	1/25S/3168:3170,1/25S/3280:3282	NA	NA
200	IL_7OSM_202 ➜	1/25S/3177:3179,1/25S/3210:3211	NA	NA
201	IL_7OSM_203 ➜	1/25S/3179:3188,1/25S/3204:3210	NA	NA
202	IL_7OSM_204 ➜	1/25S/3193:3194,1/25S/3197:3199	NA	NA
203	IL_7OSM_205 ➜	1/25S/3223:3230,1/25S/3257:3262	NA	NA
204	IL_7OSM_206 ➜	1/25S/3233:3235,1/25S/3252:3254	NA	NA
205	IL_7OSM_207 ➜	1/25S/3235:3238,1/25S/3249:3252	NA	NA
206	IL_7OSM_208 ➜	1/25S/3318:3320,1/25S/3387:3388	NA	NA
207	IL_7OSM_209 ➜	1/25S/3324:3325,1/25S/3381:3383	NA	NA
208	IL_7OSM_210 ➜	1/25S/3328:3330,1/25S/3373:3378	NA	NA
209	IL_7OSM_211 ➜	1/25S/3332:3337,1/25S/3367:3371	NA	NA
210	IL_7OSM_212 ➜	1/25S/3340:3342,1/25S/3363:3364	NA	NA
211	IL_7OSM_213 ➜	1/25S/3342:3345,1/25S/3360:3363	NA	NA
212	IL_7OSM_214 ➜	1/58S/64:67,1/58S/92:96	NA	NA
213	IL_7OSM_215 ➜	1/58S/68:69,1/58S/89:91	NA	NA
214	IL_7OSM_216 ➜	1/58S/69:73,1/58S/78:89	NA	NA
215	IL_7OSM_217 ➜	1/AB/15:16,1/AB/63:65	NA	NA
216	IL_7OSM_218 ➜	1/AB/21:27,1/AB/53:58	NA	NA
217	IL_7OSM_219 ➜	1/AB/28:29,1/AB/49:52	NA	NA
218	IL_7OSM_220 ➜	1/AB/29:30,1/AB/47:49	NA	NA
219	IL_7OSM_221 ➜	1/AB/32:36,1/AB/41:45	NA	NA
220	IL_7OSM_222 ➜	1/AB/72:80,1/AB/100:106	NA	NA
221	IL_7OSM_223 ➜	1/AB/84:87,1/AB/94:96	NA	NA

Problematic loops

#	loop id	Problem	Sequence
1	IL_7OSM_014 ➜	missing nts	NA
2	IL_7OSM_099 ➜	missing nts	NA

Valid loops

#	loop id	location	annotation	motif
1	J3_7OSM_001 ➜	1/18S/41:42,1/18S/433:439,1/18S/464:466	NA	NA
2	J3_7OSM_002 ➜	1/18S/633:635,1/18S/861:865,1/18S/965:966	NA	NA
3	J3_7OSM_003 ➜	1/18S/760:763,1/18S/773:775,1/18S/785:790	NA	NA
4	J3_7OSM_004 ➜	1/18S/881:884,1/18S/928:936,1/18S/943:947	NA	NA
5	J3_7OSM_005 ➜	1/18S/1037:1039,1/18S/1079:1083,1/18S/1090:1094	NA	NA
6	J3_7OSM_006 ➜	1/18S/1161:1164,1/18S/1581:1587,1/18S/1609:1616	NA	NA
7	J3_7OSM_007 ➜	1/18S/1168:1172,1/18S/1467:1470,1/18S/1574:1577	NA	NA
8	J3_7OSM_008 ➜	1/18S/1179:1187,1/18S/1198:1209,1/18S/1454:1459	NA	NA
9	J3_7OSM_009 ➜	1/18S/1215:1222,1/18S/1261:1267,1/18S/1442:1448	NA	NA
10	J3_7OSM_010 ➜	1/18S/1283:1288,1/18S/1327:1332,1/18S/1419:1424	NA	NA
11	J3_7OSM_011 ➜	1/18S/1293:1294,1/18S/1303:1306,1/18S/1318:1322	NA	NA
12	J3_7OSM_012 ➜	1/18S/1336:1338,1/18S/1386:1389,1/18S/1412:1415	NA	NA
13	J3_7OSM_013 ➜	1/18S/1470:1474,1/18S/1533:1540,1/18S/1571:1574	NA	NA
14	J3_7OSM_014 ➜	1/25S/113:123,1/25S/149:158,1/25S/263:267	NA	NA
15	J3_7OSM_015 ➜	1/25S/369:376,1/25S/403:404,1/58S/19:20	NA	NA
16	J3_7OSM_016 ➜	1/25S/502:503,1/25S/588:597,1/25S/606:611	NA	NA
17	J3_7OSM_017 ➜	1/25S/814:820,1/25S/905:907,1/25S/923:926	NA	NA
18	J3_7OSM_018 ➜	1/25S/829:831,1/25S/863:867,1/25S/892:895	NA	NA
19	J3_7OSM_019 ➜	1/25S/986:987,1/25S/1062:1066,1/25S/1092:1098	NA	NA
20	J3_7OSM_020 ➜	1/25S/1230:1232,1/25S/1256:1262,1/25S/1277:1279	NA	NA
21	J3_7OSM_021 ➜	1/25S/1479:1485,1/25S/1857:1859,1/25S/1871:1874	NA	NA
22	J3_7OSM_022 ➜	1/25S/1488:1491,1/25S/1837:1843,1/25S/1852:1854	NA	NA
23	J3_7OSM_023 ➜	1/25S/1526:1531,1/25S/1591:1595,1/25S/1612:1613	NA	NA
24	J3_7OSM_024 ➜	1/25S/1631:1632,1/25S/1641:1645,1/25S/1810:1811	NA	NA
25	J3_7OSM_025 ➜	1/25S/2432:2435,1/25S/2512:2517,1/25S/2590:2597	NA	NA
26	J3_7OSM_026 ➜	1/25S/2664:2666,1/25S/2690:2692,1/25S/2701:2706	NA	NA
27	J3_7OSM_027 ➜	1/25S/2886:2889,1/25S/2914:2916,1/25S/2930:2936	NA	NA
28	J3_7OSM_028 ➜	1/25S/3298:3303,1/25S/3311:3318,1/25S/3388:3390	NA	NA
29	J3_7OSM_029 ➜	1/58S/44:45,1/58S/58:64,1/58S/96:100	NA	NA
30	J3_7OSM_030 ➜	1/AB/9:14,1/AB/66:67,1/AB/111:112	NA	NA

Problematic loops

No problematic loops

Coloring options: Nucleotide numbers

7OSM Internal, Hairpin and 3-way Junction Loop Motifs

Valid loops

Problematic loops

Valid loops

Problematic loops

Valid loops

Problematic loops